ras-related protein rab-30, maker-scaffold466_size163480-snap-gene-0.18 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of ras-related protein rab-30 vs. L. salmonis genes
Match: EMLSAG00000012618 (supercontig:LSalAtl2s:LSalAtl2s94:53587:63698:1 gene:EMLSAG00000012618 transcript:EMLSAT00000012618 description:"maker-LSalAtl2s94-augustus-gene-0.17") HSP 1 Score: 342.813 bits (878), Expect = 1.338e-118 Identity = 162/202 (80.20%), Postives = 184/202 (91.09%), Query Frame = 0 Query: 4 MEDYKYLFKVVLVGNAGVGKTCLVRRFTQGMFPPGQGATIGVDFMIKTVEVEGEKIKLQIWDTAGQERFRSITQSYYRSAHALILVYDVSNQPTFDCCPEWLREIEEYASPKVLKVLVGNKIDRDDREIPTEVGEEFSNRHGMYFLETSAKGSENVEKLFSQIAQELLQLSKTREVPGYSASS-QILQTGNGHSSSLNQRCC 204 MEDYKYLFKVVLVGNAGVGKTCLVR+ TQGMFPPGQGATIGVDFMIKT+E++GEKIKLQIWDTAGQER RSITQSYYRSAHALILV+DVSNQPTFD CPEWLREIEEYASPKVLKVLVGNK DRDDREIP E+GE+F+ R+ MY+LETSAK +NVE+LF +IAQELLQ +K++E+P YS S+ QILQ G+ SS +N++CC Sbjct: 232 MEDYKYLFKVVLVGNAGVGKTCLVRQXTQGMFPPGQGATIGVDFMIKTLEIQGEKIKLQIWDTAGQERXRSITQSYYRSAHALILVFDVSNQPTFDSCPEWLREIEEYASPKVLKVLVGNKTDRDDREIPEEIGEDFAQRYSMYYLETSAKSCDNVERLFVEIAQELLQQAKSKELPSYSNSAQQILQPGS--SSEVNKKCC 431
BLAST of ras-related protein rab-30 vs. L. salmonis genes
Match: EMLSAG00000009511 (supercontig:LSalAtl2s:LSalAtl2s612:149458:156023:-1 gene:EMLSAG00000009511 transcript:EMLSAT00000009511 description:"maker-LSalAtl2s612-snap-gene-1.42") HSP 1 Score: 186.808 bits (473), Expect = 1.407e-57 Identity = 85/165 (51.52%), Postives = 126/165 (76.36%), Query Frame = 0 Query: 7 YKYLFKVVLVGNAGVGKTCLVRRFTQGMFPPGQGATIGVDFMIKTVEVEGEKIKLQIWDTAGQERFRSITQSYYRSAHALILVYDVSNQPTFDCCPEWLREIEEYASPKVLKVLVGNKIDRDD-REIPTEVGEEFSNRHGMYFLETSAKGSENVEKLFSQIAQEL 170 Y YLFK++L+G++GVGKTC++ RF++ F +TIG+DF I+T+E++G+KIKLQIWDTAGQERFR+IT +YYR A ++LVYD++N +FD W+R IEE+AS V K+++GNK D +D R++ E GE+ + +G+ F+ETSAK S NVE+ F +A+++ Sbjct: 46 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNDKSFDNIKNWIRNIEEHASADVEKMILGNKCDINDRRKVTKEKGEDLAIEYGIKFMETSAKSSINVEEAFFTLARDI 210
BLAST of ras-related protein rab-30 vs. L. salmonis genes
Match: EMLSAG00000001458 (supercontig:LSalAtl2s:LSalAtl2s1248:131241:136261:1 gene:EMLSAG00000001458 transcript:EMLSAT00000001458 description:"maker-LSalAtl2s1248-augustus-gene-0.13") HSP 1 Score: 178.718 bits (452), Expect = 2.755e-57 Identity = 83/166 (50.00%), Postives = 121/166 (72.89%), Query Frame = 0 Query: 6 DYKYLFKVVLVGNAGVGKTCLVRRFTQGMFPPGQGATIGVDFMIKTVEVEGEKIKLQIWDTAGQERFRSITQSYYRSAHALILVYDVSNQPTFDCCPEWLREIEEYASPKVLKVLVGNKIDRDDRE-IPTEVGEEFSNRHGMYFLETSAKGSENVEKLFSQIAQEL 170 +Y YLFK++L+G++GVGK+CL+ RF + +TIGVDF I+T+E++G+ IKLQIWDTAGQERFR+IT SYYR AH +I+VYDV++Q +F+ +WL+EI+ YA V K+LVGNK D ++ + +E++++ M FLE SAK + NVE+ F +A E+ Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNLKQWLQEIDRYACENVNKLLVGNKCDLTTKKVVDYTTAKEYADQLNMPFLEASAKNATNVEQAFMTMAAEI 169
BLAST of ras-related protein rab-30 vs. L. salmonis genes
Match: EMLSAG00000003241 (supercontig:LSalAtl2s:LSalAtl2s178:231454:232215:-1 gene:EMLSAG00000003241 transcript:EMLSAT00000003241 description:"augustus_masked-LSalAtl2s178-processed-gene-2.6") HSP 1 Score: 161.77 bits (408), Expect = 1.348e-50 Identity = 76/164 (46.34%), Postives = 114/164 (69.51%), Query Frame = 0 Query: 11 FKVVLVGNAGVGKTCLVRRFTQGMFPPGQGATIGVDFMIKTVEVEGEKIKLQIWDTAGQERFRSITQSYYRSAHALILVYDVSNQPTFDCCPEWLREIEEYASP-KVLKVLVGNKIDRDD-REIPTEVGEEFSNRHGMYFLETSAKGSENVEKLFSQIAQELLQ 172 K++++G +GVGK+ L+ RFT+ F P ATIGVDF +KT+ V+G ++KL IWDTAGQERFR++T SYYR ILVYDV+N+ +F WL E++ YA+ ++K+LVGNK D ++ R I E G++ + +H M F+E+SAK E V+ F ++ + ++Q Sbjct: 10 LKLLIIGESGVGKSSLLLRFTEDAFDPDHSATIGVDFKVKTLTVQGNRVKLAIWDTAGQERFRTLTPSYYRGGQGAILVYDVTNRDSFSNVENWLNELDTYATNHDIVKMLVGNKCDLEEKRAISKEEGQKCARKHRMMFIESSAKTREGVQLAFEELVENIIQ 173
BLAST of ras-related protein rab-30 vs. L. salmonis genes
Match: EMLSAG00000005111 (supercontig:LSalAtl2s:LSalAtl2s26:918032:918799:-1 gene:EMLSAG00000005111 transcript:EMLSAT00000005111 description:"augustus_masked-LSalAtl2s26-processed-gene-8.9") HSP 1 Score: 151.369 bits (381), Expect = 6.539e-46 Identity = 83/205 (40.49%), Postives = 119/205 (58.05%), Query Frame = 0 Query: 6 DYKYLFKVVLVGNAGVGKTCLVRRFTQGMFPPGQGATIGVDFMIKTVEVEGEKIKLQIWDTAGQERFRS--------------------------------ITQSYYRSAHALILVYDVSNQPTFDCCPEWLREIEEYASPKVL-KVLVGNKIDRD--DREIPTEVGEEFSNRHGMYFLETSAKGSENVEKLFSQIAQELLQLSK 175 DY +LFK++++G++GVGK+ L+ RF F TIGVDF I+T+EV GE++KLQIWDTAGQERFR+ IT +YYR H +I+VYDVSN +F WL EI++ S +V+ + LVGNK D D + + TE + FS++ G+ ETSAK + NVE++F + + +L+ K Sbjct: 5 DYDHLFKLLIIGDSGVGKSSLLLRFADNSFTGNYITTIGVDFKIRTLEVNGERVKLQIWDTAGQERFRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXITATYYRGTHGVIVVYDVSNGESFANVKRWLHEIDQNCSSEVVSRXLVGNKNDGDTAKKVVLTEDAKRFSDQMGIRLFETSAKENFNVEEMFKSLTELVLKSKK 209
BLAST of ras-related protein rab-30 vs. L. salmonis genes
Match: EMLSAG00000003190 (supercontig:LSalAtl2s:LSalAtl2s1770:8657:11199:-1 gene:EMLSAG00000003190 transcript:EMLSAT00000003190 description:"augustus_masked-LSalAtl2s1770-processed-gene-0.0") HSP 1 Score: 149.443 bits (376), Expect = 1.353e-45 Identity = 69/166 (41.57%), Postives = 110/166 (66.27%), Query Frame = 0 Query: 2 ATMEDYKYLFKVVLVGNAGVGKTCLVRRFTQGMFPPGQGATIGVDFMIKTVEVEGEKIKLQIWDTAGQERFRSITQSYYRSAHALILVYDVSNQPTFDCCPEWLREIEEYASPKVLKVLVGNKID-RDDREIPTEVGEEFSNRHGMYFLETSAKGSENVEKLFSQI 166 A +++ Y+FK++++GN+ VGKT + R+ F +T+G+DF +KTV + +++KLQIWDTAGQER+R+IT +YYR A IL+YDV+N+ +F+ +W +I+ Y+ +LVGNK D D+R I E G++ ++ G+ F ETSAK + NV F ++ Sbjct: 13 AADQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRQDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDVTNEDSFNHVHDWCTQIKTYSWDNAQVILVGNKCDMEDERVISFERGKQLADSLGLEFFETSAKENINVRAXFERL 178
BLAST of ras-related protein rab-30 vs. L. salmonis genes
Match: EMLSAG00000011153 (supercontig:LSalAtl2s:LSalAtl2s759:225438:227635:-1 gene:EMLSAG00000011153 transcript:EMLSAT00000011153 description:"maker-LSalAtl2s759-augustus-gene-2.13") HSP 1 Score: 145.206 bits (365), Expect = 3.812e-44 Identity = 69/161 (42.86%), Postives = 106/161 (65.84%), Query Frame = 0 Query: 11 FKVVLVGNAGVGKTCLVRRFTQGMFPPGQGATIGVDFMIKTVEVEGEKIKLQIWDTAGQERFRSITQSYYRSAHALILVYDVSNQPTFDCCPEWLREIEEYASPKVLKVLVGNKIDRD-DREIPTEVGEEFSNRHGMYFLETSAKGSENVEKLFSQIAQEL 170 FK+VL+G + VGK+ LV RF +G F Q +TIG F+ +T+ ++ +K +IWDTAGQER+ S+ YYR A A I+VYDV+NQ +F W++E++ ASP ++ L GNK D + R + E + ++ +G+ F+ETSAK + NV +F +IA++L Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTICLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDVTNQDSFIRAKNWVKELQRQASPNIVIALAGNKADLNTKRLVIYEEAQTYAEENGLLFMETSAKTALNVNDVFLEIAKKL 182
BLAST of ras-related protein rab-30 vs. L. salmonis genes
Match: EMLSAG00000000624 (supercontig:LSalAtl2s:LSalAtl2s109:73593:97815:1 gene:EMLSAG00000000624 transcript:EMLSAT00000000624 description:"maker-LSalAtl2s109-augustus-gene-1.21") HSP 1 Score: 148.673 bits (374), Expect = 1.224e-41 Identity = 74/171 (43.27%), Postives = 110/171 (64.33%), Query Frame = 0 Query: 7 YKYLFKVVLVGNAGVGKTCLVRRFTQGMFPPGQGATIGVDFMIKTVEV-EGEKIKLQIWDTAGQERFRSITQSYYRSAHALILVYDVSNQPTFDCCPEWLREIEEYASP-KVLKVLVGNKIDRDD-----REIPTEVGEEFSNRHGMYFLETSAKGSENVEKLFSQIAQEL 170 ++Y F+++L+G++ VGK+ L++ FT G F T+G+DF K + V +G +KL +WDTAGQERFRSIT+SYYR+ A +L+YDV N+ +F P W+ E ++ P K + +LVG K D + RE+PTE F+ HG+ FLETSA+ NV+ F + QE+ Sbjct: 1461 FEYQFRLILIGDSTVGKSSLLKYFTDGSFGEVSDPTVGIDFFAKLLPVKDGNVMKLLLWDTAGQERFRSITRSYYRNTVAALLIYDVCNRDSFTHIPNWMHEAGKHMEPSKCVFILVGCKYDMAENNPGVREVPTEEARTFAELHGLQFLETSARTGHNVDNAFRLLTQEI 1631
BLAST of ras-related protein rab-30 vs. L. salmonis genes
Match: EMLSAG00000005149 (supercontig:LSalAtl2s:LSalAtl2s272:1903:7665:1 gene:EMLSAG00000005149 transcript:EMLSAT00000005149 description:"snap_masked-LSalAtl2s272-processed-gene-0.5") HSP 1 Score: 138.658 bits (348), Expect = 1.478e-41 Identity = 71/176 (40.34%), Postives = 107/176 (60.80%), Query Frame = 0 Query: 5 EDYKYLFKVVLVGNAGVGKTCLVRRFTQGMFPPGQGATIGVDFMIKTVEVEGEKIKLQIWDTAGQERFRSITQSYYRSAHALILVYDVSNQPTFDCCPEWLREIEEYASPKVLKVLVGNKID-RDDREIPTEVGEEFSNRHGMYFLETSAKGSENVEKLFSQIAQELLQLSKTREV 179 E+Y YLFKVVL+G++GVGK L+ +T G V+G+ +K QIWDTAGQER+R+IT +YYR A +LVYD++ T++ WLRE+ ++A ++ +LVGNK D R R +PT+ + F+ ++ + F+ETSA S NVE F I E+ ++ R++ Sbjct: 6 EEYDYLFKVVLIGDSGVGKMILLCTYTVGEKI-----------------VDGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVDRWLRELRDHADSNIVIMLVGNKCDLRHLRAVPTDEAKHFAEQNNLSFIETSALDSTNVETAFHNILTEIYRIVSQRQL 164
BLAST of ras-related protein rab-30 vs. L. salmonis genes
Match: EMLSAG00000002040 (supercontig:LSalAtl2s:LSalAtl2s136:216604:221557:1 gene:EMLSAG00000002040 transcript:EMLSAT00000002040 description:"maker-LSalAtl2s136-augustus-gene-2.7") HSP 1 Score: 138.272 bits (347), Expect = 2.672e-41 Identity = 72/177 (40.68%), Postives = 104/177 (58.76%), Query Frame = 0 Query: 11 FKVVLVGNAGVGKTCLVRRFTQGMFPPGQGATIGVDFMIKTVEVEGEKIKLQIWDTAGQERFRSITQSYYRSAHALILVYDVSNQPTFDCCPEWLREIEEYASPKVLKVLVGNKID-RDDREIPTEVGEEFSNRHGMYFLETSAKGSENVEKLFSQIAQELLQLSKTREVPGYSASS 186 FK+V +G VGKT L+ RF F ATIG+DF+ KT+ +E ++LQ+WDTAGQERFRS+ SY R + ++VYD +N +F +W+ ++ V+ +LVGNK D + R++PTE GE + + F+ETSAK NV+ LF ++A L PG +SS Sbjct: 14 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDTTNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSEKRQVPTEDGERKAKELNVMFIETSAKAGYNVKLLFRRVAAXL---------PGMDSSS 181
BLAST of ras-related protein rab-30 vs. SwissProt
Match: gi|38258937|sp|Q15771.2|RAB30_HUMAN (RecName: Full=Ras-related protein Rab-30; Flags: Precursor >gi|68652043|sp|Q923S9.1|RAB30_MOUSE RecName: Full=Ras-related protein Rab-30; Flags: Precursor >gi|116255980|sp|Q17QB7.1|RAB30_BOVIN RecName: Full=Ras-related protein Rab-30; Flags: Precursor) HSP 1 Score: 263.077 bits (671), Expect = 5.119e-89 Identity = 124/170 (72.94%), Postives = 145/170 (85.29%), Query Frame = 0 Query: 3 TMEDYKYLFKVVLVGNAGVGKTCLVRRFTQGMFPPGQGATIGVDFMIKTVEVEGEKIKLQIWDTAGQERFRSITQSYYRSAHALILVYDVSNQPTFDCCPEWLREIEEYASPKVLKVLVGNKID-RDDREIPTEVGEEFSNRHGMYFLETSAKGSENVEKLFSQIAQELL 171 +MEDY +LFK+VL+GNAGVGKTCLVRRFTQG+FPPGQGATIGVDFMIKTVE+ GEK+KLQIWDTAGQERFRSITQSYYRSA+ALIL YD++ + +F C PEWLREIE+YAS KV+ VLVGNKID + RE+ + EEFS MY+LETSAK S+NVEKLF +A L+ Sbjct: 2 SMEDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRLI 171
BLAST of ras-related protein rab-30 vs. SwissProt
Match: gi|114088|sp|P28186.1|RAE1C_ARATH (RecName: Full=Ras-related protein RABE1c; Short=AtRABE1c; AltName: Full=Ras-related protein Ara-3; AltName: Full=Ras-related protein Rab8A; Short=AtRab8A) HSP 1 Score: 196.052 bits (497), Expect = 2.002e-62 Identity = 95/204 (46.57%), Postives = 138/204 (67.65%), Query Frame = 0 Query: 6 DYKYLFKVVLVGNAGVGKTCLVRRFTQGMFPPGQGATIGVDFMIKTVEVEGEKIKLQIWDTAGQERFRSITQSYYRSAHALILVYDVSNQPTFDCCPEWLREIEEYASPKVLKVLVGNKIDRDD--REIPTEVGEEFSNRHGMYFLETSAKGSENVEKLFSQIAQELLQ-LSKT--REVPGYSASSQILQTGNGHSSSLNQRCC 204 DY YL K++L+G++GVGK+CL+ RF+ G F TIG+DF I+T+E++G++IKLQIWDTAGQERFR+IT +YYR A ++LVYDV+++ +F+ W+R IE++AS V K+LVGNK D D+ R +PT G+ ++ +G+ F ETSAK + NVE++F I +++ Q LS T R P SQ Q ++ CC Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQRLSDTDSRAEPATIKISQTDQAAGAGQATQKSACC 214
BLAST of ras-related protein rab-30 vs. SwissProt
Match: gi|75098184|sp|O24466.1|RAE1A_ARATH (RecName: Full=Ras-related protein RABE1a; Short=AtRABE1a; AltName: Full=Ras-related protein Rab8B; Short=AtRab8B) HSP 1 Score: 195.282 bits (495), Expect = 4.388e-62 Identity = 93/206 (45.15%), Postives = 140/206 (67.96%), Query Frame = 0 Query: 6 DYKYLFKVVLVGNAGVGKTCLVRRFTQGMFPPGQGATIGVDFMIKTVEVEGEKIKLQIWDTAGQERFRSITQSYYRSAHALILVYDVSNQPTFDCCPEWLREIEEYASPKVLKVLVGNKIDRDD--REIPTEVGEEFSNRHGMYFLETSAKGSENVEKLFSQIAQELLQLSKTREVPGYSASSQILQT--GNGHSSSLNQRCCLGS 207 DY YL K++L+G++GVGK+CL+ RF+ G F TIG+DF I+T+E++G++IKLQIWDTAGQERFR+IT +YYR A ++LVYDV+++ +F+ W+R IE++AS V K+LVGNK D D+ R +P G+ ++ +GM F ETSAK + NVE++F IA+++ Q + + +I Q+ G G S + + C G+ Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDSVNKILVGNKADMDESKRAVPKSKGQALADEYGMKFFETSAKTNLNVEEVFFSIAKDIKQRLADTDARAEPQTIKINQSDQGAGTSQATQKSACCGT 216
BLAST of ras-related protein rab-30 vs. SwissProt
Match: gi|13638434|sp|Q92930.2|RAB8B_HUMAN (RecName: Full=Ras-related protein Rab-8B; Flags: Precursor) HSP 1 Score: 192.971 bits (489), Expect = 2.863e-61 Identity = 86/166 (51.81%), Postives = 128/166 (77.11%), Query Frame = 0 Query: 7 YKYLFKVVLVGNAGVGKTCLVRRFTQGMFPPGQGATIGVDFMIKTVEVEGEKIKLQIWDTAGQERFRSITQSYYRSAHALILVYDVSNQPTFDCCPEWLREIEEYASPKVLKVLVGNKIDRDD-REIPTEVGEEFSNRHGMYFLETSAKGSENVEKLFSQIAQELL 171 Y YLFK++L+G++GVGKTCL+ RF++ F +TIG+DF I+T+E++G+KIKLQIWDTAGQERFR+IT +YYR A ++LVYD++N+ +FD W+R IEE+AS V ++++GNK D +D R++ E GE+ + +G+ FLETSAK S NVE+ F +A++++ Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSANVEEAFFTLARDIM 170
BLAST of ras-related protein rab-30 vs. SwissProt
Match: gi|2500066|sp|P70550.1|RAB8B_RAT (RecName: Full=Ras-related protein Rab-8B; Flags: Precursor >gi|46576875|sp|P61028.1|RAB8B_MOUSE RecName: Full=Ras-related protein Rab-8B; Flags: Precursor) HSP 1 Score: 192.971 bits (489), Expect = 2.990e-61 Identity = 86/166 (51.81%), Postives = 128/166 (77.11%), Query Frame = 0 Query: 7 YKYLFKVVLVGNAGVGKTCLVRRFTQGMFPPGQGATIGVDFMIKTVEVEGEKIKLQIWDTAGQERFRSITQSYYRSAHALILVYDVSNQPTFDCCPEWLREIEEYASPKVLKVLVGNKIDRDD-REIPTEVGEEFSNRHGMYFLETSAKGSENVEKLFSQIAQELL 171 Y YLFK++L+G++GVGKTCL+ RF++ F +TIG+DF I+T+E++G+KIKLQIWDTAGQERFR+IT +YYR A ++LVYD++N+ +FD W+R IEE+AS V ++++GNK D +D R++ E GE+ + +G+ FLETSAK S NVE+ F +A++++ Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIM 170
BLAST of ras-related protein rab-30 vs. SwissProt
Match: gi|1176710|sp|P01123.2|YPT1_YEAST (RecName: Full=GTP-binding protein YPT1; AltName: Full=Protein YP2; AltName: Full=Rab GTPase YPT1; AltName: Full=Transport GTPase YPT1) HSP 1 Score: 192.586 bits (488), Expect = 3.196e-61 Identity = 89/166 (53.61%), Postives = 126/166 (75.90%), Query Frame = 0 Query: 6 DYKYLFKVVLVGNAGVGKTCLVRRFTQGMFPPGQGATIGVDFMIKTVEVEGEKIKLQIWDTAGQERFRSITQSYYRSAHALILVYDVSNQPTFDCCPEWLREIEEYASPKVLKVLVGNKID-RDDREIPTEVGEEFSNRHGMYFLETSAKGSENVEKLFSQIAQEL 170 +Y YLFK++L+GN+GVGK+CL+ RF+ + +TIGVDF IKTVE++G+ +KLQIWDTAGQERFR+IT SYYR +H +I+VYDV++Q +F+ WL+EI+ YA+ VLK+LVGNK D +D R + +V +EF++ + M FLETSA S NVE F +A+++ Sbjct: 4 EYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYATSTVLKLLVGNKCDLKDKRVVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMARQI 169
BLAST of ras-related protein rab-30 vs. SwissProt
Match: gi|75070935|sp|Q5REC9.1|RAB8B_PONAB (RecName: Full=Ras-related protein Rab-8B; Flags: Precursor) HSP 1 Score: 192.586 bits (488), Expect = 3.560e-61 Identity = 86/166 (51.81%), Postives = 128/166 (77.11%), Query Frame = 0 Query: 7 YKYLFKVVLVGNAGVGKTCLVRRFTQGMFPPGQGATIGVDFMIKTVEVEGEKIKLQIWDTAGQERFRSITQSYYRSAHALILVYDVSNQPTFDCCPEWLREIEEYASPKVLKVLVGNKIDRDD-REIPTEVGEEFSNRHGMYFLETSAKGSENVEKLFSQIAQELL 171 Y YLFK++L+G++GVGKTCL+ RF++ F +TIG+DF I+T+E++G+KIKLQIWDTAGQERFR+IT +YYR A ++LVYD++N+ +FD W+R IEE+AS V ++++GNK D +D R++ E GE+ + +G+ FLETSAK S NVE+ F +A++++ Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIM 170
BLAST of ras-related protein rab-30 vs. SwissProt
Match: gi|3024527|sp|Q39433.1|RB1BV_BETVU (RecName: Full=Ras-related protein RAB1BV) HSP 1 Score: 192.2 bits (487), Expect = 6.411e-61 Identity = 90/203 (44.33%), Postives = 139/203 (68.47%), Query Frame = 0 Query: 6 DYKYLFKVVLVGNAGVGKTCLVRRFTQGMFPPGQGATIGVDFMIKTVEVEGEKIKLQIWDTAGQERFRSITQSYYRSAHALILVYDVSNQPTFDCCPEWLREIEEYASPKVLKVLVGNKIDRDD--REIPTEVGEEFSNRHGMYFLETSAKGSENVEKLFSQIAQELLQLSKTREVPGYSASSQILQTGN--GHSSSLNQRCC 204 DY YL K++L+G++GVGK+CL+ RF+ G F TIG+DF I+T+E++G++IKLQIWDTAGQERFR+IT +YYR A ++LVYDV+++ +F+ W+R IE++AS V K+LVGNK D D+ R +PT G+ ++ +G+ F ETSAK + NVE++F IA+++ Q + + S ++ + G+ ++ CC Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADSDTRQEAQPSITIKPADQSGNQAAAKSACC 213
BLAST of ras-related protein rab-30 vs. SwissProt
Match: gi|81887426|sp|Q53B90.1|RAB43_RAT (RecName: Full=Ras-related protein Rab-43) HSP 1 Score: 190.274 bits (482), Expect = 2.968e-60 Identity = 88/169 (52.07%), Postives = 125/169 (73.96%), Query Frame = 0 Query: 5 EDYKYLFKVVLVGNAGVGKTCLVRRFTQGMFPPGQGATIGVDFMIKTVEVEGEKIKLQIWDTAGQERFRSITQSYYRSAHALILVYDVSNQPTFDCCPEWLREIEEYASPKVLKVLVGNKIDRDD-REIPTEVGEEFSNRHGMY-FLETSAKGSENVEKLFSQIAQELL 171 E Y +LFK+VLVG+A VGKTC+V+RF G F QG+TIGVDF +KT+E++G+++KLQIWDTAGQERFR+ITQSYYRSA+ IL YD+S + TF P W+ ++ +YA ++++L+GNK D D RE+P + + + + +ETSAK S NVE+ F+++A EL+ Sbjct: 11 EHYDFLFKLVLVGDASVGKTCVVQRFKTGAFSARQGSTIGVDFTMKTLEIQGKRVKLQIWDTAGQERFRTITQSYYRSANGAILAYDISKRSTFLSVPHWIEDVRKYAGSNIVQLLIGNKSDLADLREVPLAEAQSLAEHYDILCAIETSAKDSSNVEEAFTRVATELI 179
BLAST of ras-related protein rab-30 vs. SwissProt
Match: gi|116255981|sp|Q2HJI8.1|RAB8B_BOVIN (RecName: Full=Ras-related protein Rab-8B; Flags: Precursor) HSP 1 Score: 190.274 bits (482), Expect = 3.217e-60 Identity = 85/166 (51.20%), Postives = 127/166 (76.51%), Query Frame = 0 Query: 7 YKYLFKVVLVGNAGVGKTCLVRRFTQGMFPPGQGATIGVDFMIKTVEVEGEKIKLQIWDTAGQERFRSITQSYYRSAHALILVYDVSNQPTFDCCPEWLREIEEYASPKVLKVLVGNKIDRDD-REIPTEVGEEFSNRHGMYFLETSAKGSENVEKLFSQIAQELL 171 Y YLFK++L+G++GVGKTCL+ RF++ F +TIG+DF I+T+E++G+KIKLQIWDTAGQERFR+IT +YYR A ++LVYD++N+ +FD W+R IEE+AS V ++++GNK D +D R++ E GE+ + +G+ FLE SAK S NVE+ F +A++++ Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLEASAKSSMNVEEAFFTLARDIM 170
BLAST of ras-related protein rab-30 vs. nr
Match: gi|751212304|ref|XP_011158920.1| (PREDICTED: ras-related protein Rab-30 [Solenopsis invicta] >gi|752897026|ref|XP_011266798.1| PREDICTED: ras-related protein Rab-30 [Camponotus floridanus] >gi|759072353|ref|XP_011345796.1| PREDICTED: ras-related protein Rab-30 isoform X1 [Ooceraea biroi] >gi|795044912|ref|XP_011868068.1| PREDICTED: ras-related protein Rab-30 isoform X2 [Vollenhovia emeryi] >gi|815793386|ref|XP_012217309.1| PREDICTED: ras-related protein Rab-30 [Linepithema humile] >gi|1153705684|ref|XP_020286940.1| ras-related protein Rab-30-like [Pseudomyrmex gracilis] >gi|322796096|gb|EFZ18672.1| hypothetical protein SINV_00440, partial [Solenopsis invicta] >gi|607355317|gb|EZA49898.1| Ras-related protein Rab-30 [Ooceraea biroi] >gi|861621545|gb|KMQ87543.1| ras-related protein rab-30-like protein [Lasius niger]) HSP 1 Score: 325.865 bits (834), Expect = 3.155e-111 Identity = 151/196 (77.04%), Postives = 177/196 (90.31%), Query Frame = 0 Query: 4 MEDYKYLFKVVLVGNAGVGKTCLVRRFTQGMFPPGQGATIGVDFMIKTVEVEGEKIKLQIWDTAGQERFRSITQSYYRSAHALILVYDVSNQPTFDCCPEWLREIEEYASPKVLKVLVGNKIDRDDREIPTEVGEEFSNRHGMYFLETSAKGSENVEKLFSQIAQELLQLSKTREVPGYSASSQILQTGNGHSSSL 199 MEDYK+LFKVVLVGNAGVGKTCLVRRFTQG+FPPGQGATIGVDFMIKTVEVE EK+KLQIWDTAGQERFRSITQSYYRSAHALILVYD+S QPTFDC P+WLREIEEYAS KVL++LVGNKIDR+DREIPT VGE+F+ RHGMYFLETSAK +ENVE+LF +IA EL++ ++++E+P Y ++ + NG ++S+ Sbjct: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVENEKVKLQIWDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLPDWLREIEEYASNKVLRILVGNKIDREDREIPTHVGEDFAQRHGMYFLETSAKEAENVERLFMEIAAELMEQARSKELPRYETNTTSI---NGKTTSI 193
BLAST of ras-related protein rab-30 vs. nr
Match: gi|780627110|ref|XP_011684576.1| (PREDICTED: ras-related protein Rab-30 isoform X1 [Wasmannia auropunctata]) HSP 1 Score: 325.479 bits (833), Expect = 3.444e-111 Identity = 151/196 (77.04%), Postives = 177/196 (90.31%), Query Frame = 0 Query: 4 MEDYKYLFKVVLVGNAGVGKTCLVRRFTQGMFPPGQGATIGVDFMIKTVEVEGEKIKLQIWDTAGQERFRSITQSYYRSAHALILVYDVSNQPTFDCCPEWLREIEEYASPKVLKVLVGNKIDRDDREIPTEVGEEFSNRHGMYFLETSAKGSENVEKLFSQIAQELLQLSKTREVPGYSASSQILQTGNGHSSSL 199 MEDYK+LFKVVLVGNAGVGKTCLVRRFTQG+FPPGQGATIGVDFMIKTVEVE EK+KLQIWDTAGQERFRSITQSYYRSAHALILVYD+S QPTFDC P+WLREIEEYAS KVL++LVGNKIDR+DREIPT VGE+F+ RHGMYFLETSAK +ENVE+LF +IA EL++ ++++E+P Y ++ + NG ++S+ Sbjct: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVENEKVKLQIWDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLPDWLREIEEYASNKVLRILVGNKIDREDREIPTHVGEDFAQRHGMYFLETSAKEAENVERLFMEIAAELMEQARSKELPRYETNTTSV---NGKTTSI 193
BLAST of ras-related protein rab-30 vs. nr
Match: gi|936680456|ref|XP_014237064.1| (ras-related protein Rab-30 [Trichogramma pretiosum]) HSP 1 Score: 325.479 bits (833), Expect = 4.195e-111 Identity = 151/196 (77.04%), Postives = 177/196 (90.31%), Query Frame = 0 Query: 4 MEDYKYLFKVVLVGNAGVGKTCLVRRFTQGMFPPGQGATIGVDFMIKTVEVEGEKIKLQIWDTAGQERFRSITQSYYRSAHALILVYDVSNQPTFDCCPEWLREIEEYASPKVLKVLVGNKIDRDDREIPTEVGEEFSNRHGMYFLETSAKGSENVEKLFSQIAQELLQLSKTREVPGYSASSQILQTGNGHSSSL 199 MEDYK+LFKVVLVGNAGVGKTCLVRRFTQG+FPPGQGATIGVDFMIKTVEVE EKIKLQIWDTAGQERFRSITQSYYRSAHALILVYD+S+QPTFDC P+WLREIEEYAS KVL++LVGNKIDR+DREIPT VGE+F+ RHGMYFLETSAK +ENVE+LF +IA EL++ ++ +E+P Y ++ + NG ++++ Sbjct: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVENEKIKLQIWDTAGQERFRSITQSYYRSAHALILVYDISSQPTFDCLPDWLREIEEYASNKVLRILVGNKIDREDREIPTHVGEDFAQRHGMYFLETSAKEAENVERLFMEIAAELMEQARCKELPRYEQNTTSI---NGKTTAI 193
BLAST of ras-related protein rab-30 vs. nr
Match: gi|939689688|ref|XP_014288791.1| (PREDICTED: ras-related protein Rab-30-like [Halyomorpha halys] >gi|939689690|ref|XP_014288792.1| PREDICTED: ras-related protein Rab-30-like [Halyomorpha halys]) HSP 1 Score: 325.094 bits (832), Expect = 5.124e-111 Identity = 151/201 (75.12%), Postives = 175/201 (87.06%), Query Frame = 0 Query: 4 MEDYKYLFKVVLVGNAGVGKTCLVRRFTQGMFPPGQGATIGVDFMIKTVEVEGEKIKLQIWDTAGQERFRSITQSYYRSAHALILVYDVSNQPTFDCCPEWLREIEEYASPKVLKVLVGNKIDRDDREIPTEVGEEFSNRHGMYFLETSAKGSENVEKLFSQIAQELLQLSKTREVPGYSASSQILQTGNGHSSSLNQRCC 204 MEDYK+LFKVVLVGNAGVGKTCLVRRFTQG+FPPGQGATIGVDFMIKTVE+E EK+KLQIWDTAGQERFRSIT SYYRSAHALILVYD+S QPTFDC P+WL+EIEEYAS KVL+VLVGNKIDRDDREIPT VGE+F+ RH MY+LETSAK S+NVE LF +IA EL++ +K++E+P Y + Q N ++S++ CC Sbjct: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEIENEKVKLQIWDTAGQERFRSITHSYYRSAHALILVYDISCQPTFDCLPDWLKEIEEYASSKVLRVLVGNKIDRDDREIPTHVGEDFAQRHNMYYLETSAKESDNVENLFVKIATELMEQAKSKELPRYDEINS--QNINRRTTSIDVTCC 199
BLAST of ras-related protein rab-30 vs. nr
Match: gi|1209685839|gb|OWR42146.1| (ras-related protein Rab-30 [Danaus plexippus plexippus]) HSP 1 Score: 324.709 bits (831), Expect = 5.706e-111 Identity = 155/204 (75.98%), Postives = 178/204 (87.25%), Query Frame = 0 Query: 4 MEDYKYLFKVVLVGNAGVGKTCLVRRFTQGMFPPGQGATIGVDFMIKTVEVEGEKIKLQIWDTAGQERFRSITQSYYRSAHALILVYDVSNQPTFDCCPEWLREIEEYASPKVLKVLVGNKIDRDDREIPTEVGEEFSNRHGMYFLETSAKGSENVEKLFSQIAQELLQLSKTREVPGYSASSQILQTGNGHSSSLNQRCCLGS 207 MEDYK+LFKVVLVGNAGVGKTCLVRRFTQG+FPPGQGATIGVDFMIKTVEV+GEK+KLQIWDTAGQERFRSITQSYYRSAHALILVYD+S QPTFDC P+WLREIEEYA+ KVL++LVGNK DR+DREIP +GE+F+ RHGMYFLETSAK +ENVE+LF +IA EL++ +K +E+P Y S L NG +SS + CCL S Sbjct: 1 MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVDGEKVKLQIWDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLPDWLREIEEYANNKVLRILVGNKTDREDREIPRHIGEDFAQRHGMYFLETSAKEAENVERLFMEIAVELMEQAKCKELPKYDGS---LGPINGKTSS-DSSCCLRS 200 The following BLAST results are available for this feature:
BLAST of ras-related protein rab-30 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 25
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BLAST of ras-related protein rab-30 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of ras-related protein rab-30 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold466_size163480:46564..53175+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold466_size163480-snap-gene-0.18 ID=maker-scaffold466_size163480-snap-gene-0.18|Name=ras-related protein rab-30|organism=Tigriopus kingsejongensis|type=gene|length=6612bp|location=Sequence derived from alignment at scaffold466_size163480:46564..53175+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'ras-related protein rab-30' has the following synonyms
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