60s ribosomal export protein nmd3, maker-scaffold476_size161517-snap-gene-0.33 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of 60s ribosomal export protein nmd3 vs. L. salmonis genes
Match: EMLSAG00000001455 (supercontig:LSalAtl2s:LSalAtl2s1247:6147:8938:-1 gene:EMLSAG00000001455 transcript:EMLSAT00000001455 description:"augustus_masked-LSalAtl2s1247-processed-gene-0.3") HSP 1 Score: 695.271 bits (1793), Expect = 0.000e+0 Identity = 316/492 (64.23%), Postives = 404/492 (82.11%), Query Frame = 0 Query: 21 VGHEAPSQHNILCCECGVPIPPNPSSTCVQCLRTQVDLSADIPKSVIVHFCKFCERYLNPPNQWVAAALESRELMALCLKKLKNLGKVRLVDAKFVWTEPHSKRLKIKLTIQGEIDGGTILQQTFVVEYVVHFQMCDDCRRVEAKDTWNASVQLRQKSDQKKTLYYLEQLLIKYNITRDCSGIKASPDGLDFFFSSESRARKLTEFLQSMIPIRTQTAKKLISHDMSSNVFNYKYTTSVEVVPICKDNIVCLPPKLAHALGGIGQICVVYKVTHLLHLIDPNTCQFVDVNAGTFFKSAFSSLIRPRNLVEYTVINVEPIADHERRKFSGQGQISKKHVLADVWVTKSSELGVNNDAIHCRSHLGHLLQVGDSVMGFDLKNSNVNDQYLEAVNPNNLADVILVKKVFGDKSLRNRKRKWRLKHMEGL--HQDTASQNEEYCNFLEDLEEDPELRKNVNVYKDPRKMVMG-ESDSEAGDVPKISLAEMLDEMSL 509 +G H ILCC+CGVPI PNP++TCV CLRTQVD++ DIPK V+++FCKFCERYLNPPNQWV+ LESRE+MALCLKKLK L KV+LVDA FVWTEPHS+R+K+KL++Q E+ TILQQTFVVEYVVH QMCDDC RVEAKDTWNASVQ+RQK+ Q+KTLYYLEQ+LIKYN T+DCSGIK +GLDFFFS+ES ARKL EFL +++PIR Q AKKLISHD +SN +NYKYT SVEVVPICKDNIVCLPPK+AH+LGG+GQI +V+KVT++LHL+DP+TCQF ++NA ++F++ F SL P++ EYTV+N+E I+D +RRKFSGQG ISK+HVLAD WV +SSELG N++ IH R+HLGH+LQ+GDSVMG +LKN NVN+ LE + + + DVIL+KKV+ K +RNR+RKW+L+HM+G+ + S+N+E +FLED+EED ++R+++N+YKD RK D ++P ++LAEML+ S+ Sbjct: 4 IGEIKEDTHKILCCQCGVPIDPNPANTCVGCLRTQVDITEDIPKQVVLNFCKFCERYLNPPNQWVSCPLESREMMALCLKKLKGLSKVKLVDANFVWTEPHSRRIKVKLSVQAEVVSATILQQTFVVEYVVHNQMCDDCHRVEAKDTWNASVQVRQKTTQRKTLYYLEQVLIKYNATKDCSGIKVVHEGLDFFFSNESHARKLVEFLGTVVPIRYQQAKKLISHDTNSNTYNYKYTFSVEVVPICKDNIVCLPPKVAHSLGGMGQIALVHKVTNVLHLLDPSTCQFAEINANSYFRTPFLSLTGPKSFTEYTVMNIEIISDFDRRKFSGQGAISKRHVLADCWVVRSSELGXNDEQIHARTHLGHILQIGDSVMGLNLKNCNVNNPELEEMAEHKIPDVILIKKVYAQKCVRNRRRKWKLRHMDGVLGTKSITSENQEMTDFLEDIEEDMDMRQHINIYKDHRKFTTAVXEDXXBXEIPGVNLAEMLESFSI 495
BLAST of 60s ribosomal export protein nmd3 vs. SwissProt
Match: gi|82186247|sp|Q6P2Z6.1|NMD3_XENTR (RecName: Full=60S ribosomal export protein NMD3) HSP 1 Score: 551.206 bits (1419), Expect = 0.000e+0 Identity = 276/517 (53.38%), Postives = 376/517 (72.73%), Query Frame = 0 Query: 12 MEYL--PATTWVGHEAPSQHNILCCECGVPIPPNPSSTCVQCLRTQVDLSADIPKSVIVHFCKFCERYLNPPNQWVAAALESRELMALCLKKLK-NLGKVRLVDAKFVWTEPHSKRLKIKLTIQGEIDGGTILQQTFVVEYVVHFQMCDDCRRVEAKDTWNASVQLRQKSDQKKTLYYLEQLLIKYNITRDCSGIKASPDGLDFFFSSESRARKLTEFLQSMIPIRTQTAKKLISHDMSSNVFNYKYTTSVEVVPICKDNIVCLPPKLAHALGGIGQICVVYKVTHLLHLIDPNTCQFVDVNAGTFFKSAFSSLIRPRNLVEYTVINVEPIADHERRKFSGQGQISKKHVLADVWVTKSSELGVNNDAIHCRSHLGHLLQVGDSVMGFDLKNSNVNDQYLEAVNPNNLADVILVKKVFGDKSLRNRKRKWRLKHMEGLHQDTASQNE-EYCNFLEDLEEDPELRKNVNVYKDPRKMVMGESDSEAGDVPKISLAEMLDEMSLDPVGDDATGGDGAQM 524 MEY+ PAT+ SQ NILCC+CG+PIPPNP++ CV CLR QVD+S IPK V VHFCK CERYL PP W+ ALESREL+ LCLKKLK NL KVRL+DA F+WTEPHSKRLK+KLTIQ E+ G ILQQ FVV+Y+V QMCDDC RVEAKD W A VQ+RQK KKT YYLEQ ++K+ + ++ +K DGLDF+++S+ A+K+ EFLQ +P R + +++LISHD+ +N +NYK T SVE+VP+CKDN+VCL PKLA +LG + QIC+ +VT +HLIDP+T Q +V+ T+++S F+SL P+ L E+ V++ + + D R++ +G G S KH+LA+VWV K+SE+ HCR+HLGHLL GD V+GFDL N N+ND+++ +NP+++ DV+L+KK + D++ R R+R W+LK +E + + +E +Y +FLEDLEED +RKNVN+YK+ V ESD++ P+ISLAEML+++ + DATGG+GA+M Sbjct: 1 MEYMKGPATS-------SQGNILCCQCGIPIPPNPANMCVSCLRMQVDISEGIPKQVSVHFCKQCERYLQPPGTWIQCALESRELLTLCLKKLKANLSKVRLIDAGFIWTEPHSKRLKVKLTIQKEVMNGAILQQVFVVDYIVQSQMCDDCHRVEAKDFWKAVVQVRQKVLHKKTFYYLEQTILKHRLHQNTLRVKEIHDGLDFYYASKQHAQKMVEFLQCTVPCRFKASQRLISHDIHTNAYNYKSTFSVEIVPVCKDNLVCLSPKLAQSLGNMNQICICVRVTSTIHLIDPSTLQIAEVDGNTYWRSPFNSLFHPKQLEEFIVMDTDIVRD--RKQAAGAGMRSNKHILAEVWVQKTSEMNTTQQ-YHCRTHLGHLLNPGDLVLGFDLANCNLNDEFINKMNPHHIPDVVLIKKSY-DRTKRQRRRNWKLKEIERDREGMDTDDERQYQDFLEDLEEDEVIRKNVNIYKNANLPV--ESDTDEEGAPRISLAEMLEDLH---ISLDATGGEGAEM 501
BLAST of 60s ribosomal export protein nmd3 vs. SwissProt
Match: gi|74731412|sp|Q96D46.1|NMD3_HUMAN (RecName: Full=60S ribosomal export protein NMD3; Short=hNMD3) HSP 1 Score: 548.51 bits (1412), Expect = 0.000e+0 Identity = 272/515 (52.82%), Postives = 362/515 (70.29%), Query Frame = 0 Query: 12 MEYLPATTWVGHEAPSQHNILCCECGVPIPPNPSSTCVQCLRTQVDLSADIPKSVIVHFCKFCERYLNPPNQWVAAALESRELMALCLKKLKN-LGKVRLVDAKFVWTEPHSKRLKIKLTIQGEIDGGTILQQTFVVEYVVHFQMCDDCRRVEAKDTWNASVQLRQKSDQKKTLYYLEQLLIKYNITRDCSGIKASPDGLDFFFSSESRARKLTEFLQSMIPIRTQTAKKLISHDMSSNVFNYKYTTSVEVVPICKDNIVCLPPKLAHALGGIGQICVVYKVTHLLHLIDPNTCQFVDVNAGTFFKSAFSSLIRPRNLVEYTVINVEPIADHERRKFSGQGQISKKHVLADVWVTKSSELGVNNDAIHCRSHLGHLLQVGDSVMGFDLKNSNVNDQYLEAVNPNNLADVILVKKVFGDKSLRNRKRKWRLKHMEGLHQDTASQNE-EYCNFLEDLEEDPELRKNVNVYKDPRKMVMGESDSEAGDVPKISLAEMLDEMSLDPVGDDATGGDGAQM 524 MEY+ +T S +ILCCECGVPI PNP++ CV CLR++VD+S IPK V + FCK C+RY PP W+ ALESREL+ALCLKK+K L KVRLVDA FVWTEPHSKRLK+KLTIQ E+ G ILQQ FVV+YVV QMC DC RVEAKD W A +Q+RQK+ KKT YYLEQL++KY + ++ IK DGLDF++SS+ A+K+ EFLQ +P R + +++LIS D+ SN +NYK T SVE+VPICKDN+VCL PKLA +LG + QICV +VT +HLIDPNT Q D++ TF+ F+SL P+ L E+ V+ + D +R +G G ISKKH L +VWV K+SE+ + CR+HLGHLL GD V+GFDL N N+ND+++ +N + + DV+L+KK + D++ R R+R W+LK + ++ + +E +Y +FLEDLEED +RKNVN+Y+D V ESD++ P+ISLAEML+++ + DATG +GA M Sbjct: 1 MEYMAEST-----DRSPGHILCCECGVPISPNPANICVACLRSKVDISQGIPKQVSISFCKQCQRYFQPPGTWIQCALESRELLALCLKKIKAPLSKVRLVDAGFVWTEPHSKRLKVKLTIQKEVMNGAILQQVFVVDYVVQSQMCGDCHRVEAKDFWKAVIQVRQKTLHKKTFYYLEQLILKYGMHQNTLRIKEIHDGLDFYYSSKQHAQKMVEFLQCTVPCRYKASQRLISQDIHSNTYNYKSTFSVEIVPICKDNVVCLSPKLAQSLGNMNQICVCIRVTSAIHLIDPNTLQVADIDGSTFWSHPFNSLCHPKQLEEFIVMECSIVQDIKRA--AGAGMISKKHTLGEVWVQKTSEMNTDKQYF-CRTHLGHLLNPGDLVLGFDLANCNLNDEHVNKMNSDRVPDVVLIKKSY-DRTKRQRRRNWKLKELARERENMDTDDERQYQDFLEDLEEDEAIRKNVNIYRDSAIPV--ESDTDDEGAPRISLAEMLEDLH---ISQDATGEEGASM 501
BLAST of 60s ribosomal export protein nmd3 vs. SwissProt
Match: gi|81903129|sp|Q99L48.1|NMD3_MOUSE (RecName: Full=60S ribosomal export protein NMD3) HSP 1 Score: 548.51 bits (1412), Expect = 0.000e+0 Identity = 271/515 (52.62%), Postives = 364/515 (70.68%), Query Frame = 0 Query: 12 MEYLPATTWVGHEAPSQHNILCCECGVPIPPNPSSTCVQCLRTQVDLSADIPKSVIVHFCKFCERYLNPPNQWVAAALESRELMALCLKKLKN-LGKVRLVDAKFVWTEPHSKRLKIKLTIQGEIDGGTILQQTFVVEYVVHFQMCDDCRRVEAKDTWNASVQLRQKSDQKKTLYYLEQLLIKYNITRDCSGIKASPDGLDFFFSSESRARKLTEFLQSMIPIRTQTAKKLISHDMSSNVFNYKYTTSVEVVPICKDNIVCLPPKLAHALGGIGQICVVYKVTHLLHLIDPNTCQFVDVNAGTFFKSAFSSLIRPRNLVEYTVINVEPIADHERRKFSGQGQISKKHVLADVWVTKSSELGVNNDAIHCRSHLGHLLQVGDSVMGFDLKNSNVNDQYLEAVNPNNLADVILVKKVFGDKSLRNRKRKWRLKHMEGLHQDTASQNE-EYCNFLEDLEEDPELRKNVNVYKDPRKMVMGESDSEAGDVPKISLAEMLDEMSLDPVGDDATGGDGAQM 524 MEY+ + + H S +ILCCECGVPI PNP++ CV CLR++VD+S +PK V + FCK C+RY PP WV ALESREL+ALCLKK+K L KVRLVDA FVWTEPHSKRLK+KLTIQ E+ G ILQQ FVV+YVV QMC DC RVEAKD W A +Q+RQK+ KKT YYLEQL++KY + ++ IK DGLDF++SS+ A+K+ EFLQ ++P R + +++LIS D+ SN +NYK T SVE+VPICKDN+VCL PKLA +LG + QIC+ +VT +HLIDPNT Q D++ TF+ F+SL P+ L E+ VI + D +R +G G ISKKH L +VW+ K+SE+ + CR+HLGHLL GD V+GFDL N N+ND+Y+ +N + + DV+L+KK + D++ R R+R W+LK + ++ + +E +Y +FLEDLEED +RK+VN+Y+D V ESD++ P+ISLAEML+++ + DATG +GA M Sbjct: 1 MEYMAES--IEH---SPGHILCCECGVPISPNPANICVACLRSKVDISQGVPKQVSISFCKQCQRYFQPPASWVQCALESRELLALCLKKIKAPLSKVRLVDAGFVWTEPHSKRLKVKLTIQKEVMNGAILQQVFVVDYVVQSQMCGDCHRVEAKDFWKAVIQVRQKTLHKKTFYYLEQLILKYGMHQNTLRIKEIHDGLDFYYSSKQHAQKMVEFLQGIVPCRYKASQRLISQDIHSNTYNYKSTFSVEIVPICKDNVVCLSPKLAQSLGNMSQICICIRVTSAIHLIDPNTLQVADIDGNTFWSHPFNSLCHPKQLEEFIVIECSTVRDLKRS--AGAGVISKKHTLGEVWIQKTSEMNTDKQYF-CRTHLGHLLNPGDLVLGFDLANCNLNDEYVNKMNSDRVPDVVLIKKSY-DRTKRQRRRNWKLKELARDRENMDTDDERQYQDFLEDLEEDEAIRKHVNIYRDATIPV--ESDTDDEGAPRISLAEMLEDLH---ISQDATGEEGASM 501
BLAST of 60s ribosomal export protein nmd3 vs. SwissProt
Match: gi|75056728|sp|Q5RC82.1|NMD3_PONAB (RecName: Full=60S ribosomal export protein NMD3) HSP 1 Score: 545.814 bits (1405), Expect = 0.000e+0 Identity = 270/515 (52.43%), Postives = 362/515 (70.29%), Query Frame = 0 Query: 12 MEYLPATTWVGHEAPSQHNILCCECGVPIPPNPSSTCVQCLRTQVDLSADIPKSVIVHFCKFCERYLNPPNQWVAAALESRELMALCLKKLKN-LGKVRLVDAKFVWTEPHSKRLKIKLTIQGEIDGGTILQQTFVVEYVVHFQMCDDCRRVEAKDTWNASVQLRQKSDQKKTLYYLEQLLIKYNITRDCSGIKASPDGLDFFFSSESRARKLTEFLQSMIPIRTQTAKKLISHDMSSNVFNYKYTTSVEVVPICKDNIVCLPPKLAHALGGIGQICVVYKVTHLLHLIDPNTCQFVDVNAGTFFKSAFSSLIRPRNLVEYTVINVEPIADHERRKFSGQGQISKKHVLADVWVTKSSELGVNNDAIHCRSHLGHLLQVGDSVMGFDLKNSNVNDQYLEAVNPNNLADVILVKKVFGDKSLRNRKRKWRLKHMEGLHQDTASQNE-EYCNFLEDLEEDPELRKNVNVYKDPRKMVMGESDSEAGDVPKISLAEMLDEMSLDPVGDDATGGDGAQM 524 MEY+ +T S +ILCCECGVPI PNP++ CV CLR++VD+S IPK V + FCK C+RY PP W+ ALESREL+ALCLKK+K L KVRLVDA FVWTEPHSKRLK+KLT+Q E+ G ILQQ FVV+YVV QMC DC RVEAKD W A +Q+RQK+ KKT Y+LEQL++KY + ++ IK DGLDF++SS+ A+K+ EFLQ +P R + +++LIS D+ SN +NYK T SVE+VPICKDN+VCL PKLA +LG + QICV +VT +HLIDPNT Q D++ TF+ F+SL P+ L E+ V+ + D +R +G G ISKKH L +VWV K+SE+ + CR+HLGHLL GD V+GFDL N N+ND+++ +N + + DV+L+KK + D++ R R+R W+LK + ++ + +E +Y +FLEDLEED +RKNVN+Y+D V ESD++ P+ISLAEML+++ + DATG +GA M Sbjct: 1 MEYMTEST-----DRSPGHILCCECGVPISPNPANICVACLRSKVDISQGIPKQVSISFCKQCQRYFQPPGTWIQCALESRELLALCLKKIKAPLSKVRLVDAGFVWTEPHSKRLKVKLTVQKEVMNGAILQQVFVVDYVVQSQMCGDCHRVEAKDFWKAVIQVRQKTLHKKTFYHLEQLILKYGMHQNTLRIKEIHDGLDFYYSSKQHAQKMVEFLQCTVPCRYKASQRLISQDIHSNTYNYKSTFSVEIVPICKDNVVCLSPKLAQSLGNMNQICVCIRVTSAIHLIDPNTLQVADIDGSTFWSHPFNSLCHPKQLEEFIVMECSIVRDIKRA--AGAGMISKKHTLGEVWVQKTSEMNTDKQYF-CRTHLGHLLNPGDLVLGFDLANCNLNDEHVNKMNSDRVPDVVLIKKSY-DRTKRQRRRNWKLKELARERENMDTDDERQYQDFLEDLEEDEAIRKNVNIYRDSAIPV--ESDTDDEGAPRISLAEMLEDLH---ISQDATGEEGASM 501
BLAST of 60s ribosomal export protein nmd3 vs. SwissProt
Match: gi|122132352|sp|Q08DS5.1|NMD3_BOVIN (RecName: Full=60S ribosomal export protein NMD3) HSP 1 Score: 535.798 bits (1379), Expect = 0.000e+0 Identity = 272/517 (52.61%), Postives = 361/517 (69.83%), Query Frame = 0 Query: 12 MEYL--PATTWVGHEAPSQHNILCCECGVPIPPNPSSTCVQCLRTQVDLSADIPKSVIVHFCKFCERYLNPPNQWVAAALESRELMALCLKKLKN-LGKVRLVDAKFVWTEPHSKRLKIKLTIQGEIDGGTILQQTFVVEYVVHFQMCDDCRRVEAKDTWNASVQLRQKSDQKKTLYYLEQLLIKYNITRDCSGIKASPDGLDFFFSSESRARKLTEFLQSMIPIRTQTAKKLISHDMSSNVFNYKYTTSVEVVPICKDNIVCLPPKLAHALGGIGQICVVYKVTHLLHLIDPNTCQFVDVNAGTFFKSAFSSLIRPRNLVEYTVINVEPIADHERRKFSGQGQISKKHVLADVWVTKSSELGVNNDAIHCRSHLGHLLQVGDSVMGFDLKNSNVNDQYLEAVNPNNLADVILVKKVFGDKSLRNRKRKWRLKHMEGLHQDTASQNE-EYCNFLEDLEEDPELRKNVNVYKDPRKMVMGESDSEAGDVPKISLAEMLDEMSLDPVGDDATGGDGAQM 524 MEY+ P GH ILCC+CGVPI PNP++ CV CLR++VD+S IPK V + FCK C+RY PP WV ALESR+L+ALCLKK+K L KVRLVDA FVWTEPHSKRLK+KLTIQ E+ G ILQQ FVV+YVV QMC DC RVEAKD W A VQ+RQK+ KKT YYLEQL++KY + ++ IK DGLDF++SS+ A+K+ EFLQ +P R + +++LIS D+ SN +NYK T SVE+VPICKDN+VCL PKLA +LG + QICV +VT ++HLIDPNT Q D++ TF+ F+SL P+ L E+ V+ + D +R +G G ISKKH L +VWV K+SE+ + CR+HLGHLL GD V+GFDL N N+ND+++ + + + DV+L+KK + D++ R R+R W+LK + ++T + +E +Y +FLEDLEED +RKNVN+Y+D V ++D E P+ISLAEML+++ + DATGG+G M Sbjct: 1 MEYMTDPVKHTPGH-------ILCCDCGVPISPNPANICVACLRSKVDISQGIPKQVSISFCKQCQRYFQPPGTWVQCALESRDLLALCLKKIKAPLSKVRLVDASFVWTEPHSKRLKVKLTIQKEVMNGAILQQVFVVDYVVQPQMCGDCHRVEAKDFWKAVVQVRQKTLHKKTFYYLEQLILKYGMHQNTLRIKEIHDGLDFYYSSKQHAQKMVEFLQCTVPTRYKASQRLISQDIHSNTYNYKSTFSVEIVPICKDNVVCLSPKLAQSLGNMNQICVCIRVTSVIHLIDPNTLQVADIDGNTFWSHPFNSLCHPKQLEEFIVMECSIVQDIKRS--AGAGMISKKHTLGEVWVQKTSEMNTDKQYF-CRTHLGHLLNPGDLVLGFDLVNCNLNDEHVNKMKSDRVPDVVLIKKSY-DRTRRQRRRNWKLKELARDRENTDTDDERQYQDFLEDLEEDEAIRKNVNIYRDSTIPVESDTDDEGA--PRISLAEMLEDLH---ISQDATGGEGESM 501
BLAST of 60s ribosomal export protein nmd3 vs. SwissProt
Match: gi|82178735|sp|Q5BLF0.1|NMD3_DANRE (RecName: Full=60S ribosomal export protein NMD3) HSP 1 Score: 522.702 bits (1345), Expect = 0.000e+0 Identity = 274/516 (53.10%), Postives = 377/516 (73.06%), Query Frame = 0 Query: 12 MEYLPATTWVGHEAPSQHNILCCECGVPIPPNPSSTCVQCLRTQVDLSADIPKSVIVHFCKFCERYLNPPNQWVAAALESRELMALCLKKLK-NLGKVRLVDAKFVWTEPHSKRLKIKLTIQGEIDGGTILQQTFVVEYVVHFQMCDDCRRVEAKDTWNASVQLRQKSDQKKTLYYLEQLLIKYNITRDCSGIKASPDGLDFFFSSESRARKLTEFLQSMIPIRTQTAKKLISHDMSSNVFNYKYTTSVEVVPICKDNIVCLPPKLAHALGGIGQICVVYKVTHLLHLIDPNTCQFVDVNAGTFFKSAFSSLIRPRNLVEYTVINVEPIADHERRKFSGQGQISKKHVLADVWVTKSSELGVNNDAIHCRSHLGHLLQVGDSVMGFDLKNSNVNDQYLEAVNPNNLADVILVKKVFGDKSLRNRKRKWRLKHMEGLHQDTASQNEE--YCNFLEDLEEDPELRKNVNVYKDPRKMVMGESDSEAGDVPKISLAEMLDEMSLDPVGDDATGGDGAQM 524 MEY+ A + S NILCC CGVPIPPNP++ CV CLRTQVD+S IPK V +HFC+ CERYL PP WV ALESREL+ALCLKKLK ++ KVRL+DA F+WTEPHSKR+KIKLTIQ E+ G ILQQ F VE+VV QMC+DC RVEAKD W A VQ+RQK+ KKT YYLEQL++K+ + ++ IK +G+DF+++++ A+K+ +FLQ +P R++ +++LISHD+ SN +NYK T SVE+VP+CKDN+VCL P+LA +LG +GQ+CV +VT +HLIDPNT Q +V+ TF++ F+SL PR L E+ +++++ I ++R +G G S KH LA+VWV K+SE+ ++ HCR+ +GHLL +GD V+GFD N+N+ND++L +NP ++ DV+L+KK + D+ R RKR W+LK M+ +D A ++E Y FLEDLEED LRKN+N+++D K+ + ESD++ P+ISLAEML+++SL DATGG+GA M Sbjct: 1 MEYMQAPP-----SSSHGNILCCTCGVPIPPNPANMCVSCLRTQVDISEGIPKQVTIHFCRQCERYLQPPGSWVQCALESRELLALCLKKLKASMSKVRLIDAGFLWTEPHSKRIKIKLTIQKEVMNGAILQQVFTVEFVVQGQMCEDCHRVEAKDFWKAVVQVRQKTVHKKTFYYLEQLILKHKLHQNTVRIKEIHEGIDFYYATKQHAQKMVDFLQCTVPCRSKASQRLISHDVHSNTYNYKSTFSVEIVPVCKDNVVCLSPRLAQSLGNMGQVCVCVRVTSSIHLIDPNTLQIAEVDGSTFWRHPFNSLCSPRQLEEFIIMDIDIIR--DQRLGAGAGLKSNKHTLAEVWVQKTSEMD-SSHQYHCRTFMGHLLNIGDLVLGFDFANANINDEFLNKMNPQHVPDVVLIKKSY-DRMKRARKRVWKLKEMDR-EKDAADTDDERQYTEFLEDLEEDEMLRKNINIFRDASKIPVEESDTDDDGAPRISLAEMLEDLSL----SDATGGEGADM 502
BLAST of 60s ribosomal export protein nmd3 vs. SwissProt
Match: gi|82184282|sp|Q6GNS3.1|NMD3_XENLA (RecName: Full=60S ribosomal export protein NMD3) HSP 1 Score: 519.62 bits (1337), Expect = 2.080e-180 Identity = 280/520 (53.85%), Postives = 372/520 (71.54%), Query Frame = 0 Query: 12 MEYL--PATTWVGHEAPSQHNILCCECGVPIPPNPSSTCVQCLRTQVDLSADIPKSVIVHFCKFCERYLNPPNQWVAAALESRELMALCLKKLK-NLGKVRLVDAKFVWTEPHSKRLKIKLTIQGEIDGGTILQQTFVVEYVVHFQMCDDCRRVEAKDTWNASVQLRQKSDQKKTLYYLEQLLIKYNITRDCSGIKASPDGLDFFFSSESRARKLTEFLQSMIPIRTQTAKKLISHDMSSNVFNYKYTTSVEVVPICKDNIVCLPPKLAHALGGIGQICVVYKVTHLLHLIDPNTCQFVDVNAGTFFKSAFSSLIRPRNLVEYTVINVEPIADHERRKFSGQGQISKKHVLADVWVTKSSELGVNNDAIHCRSHLGHLLQVGDSVMGFDLKNSNVNDQYLEAVNPNNLADVILVKKVFGDKSLRNRKRKWRLKHM----EGLHQDTASQNEEYCNFLEDLEEDPELRKNVNVYKDPRKMVMGESDSEAGDVPKISLAEMLDEMSLDPVGDDATGGDGAQM 524 MEY+ PAT+ SQ NILCC+CG+PIPPNP++ CV CLRTQVD+S IPK V VHFCK CERYL PP W+ ALESREL+ LCLKKLK NL KVRL+DA F+WTEPHSKRLK+KLTIQ E+ G ILQQ FVV+YVV QMCDDC RVEAKD W A VQ+RQK KKT YYLEQ ++K+ + ++ +K DGLDF+++S+ +K+ EFLQ +P R + +++LISHD+ +N +NYK T SVE+VP+CKDN+VCL PKLA +LG + QIC+ +VT +HLIDP+T Q +V+ T+++ F+SL P+ + E+ V++ E I D R++ +G G S KHVLA+VWV K+SE+ HCR+HLGHLL GD V+GFDL N N+ND+++ +NP+++ DV+L+KK + D++ R R+R W+LK M EG+ D Q Y +FLEDLEED LRKNVN++K+ V ESD++ P+ISLAEML+++ + DATG +GA M Sbjct: 1 MEYMKGPATS-------SQGNILCCQCGIPIPPNPANMCVACLRTQVDISEGIPKQVSVHFCKQCERYLQPPGTWIQCALESRELLTLCLKKLKANLSKVRLIDAGFIWTEPHSKRLKVKLTIQKEVMNGAILQQVFVVDYVVQAQMCDDCHRVEAKDFWKAVVQVRQKVLHKKTFYYLEQTILKHRLHQNTLRVKEIHDGLDFYYASKQHGQKMVEFLQCTVPCRFKASQRLISHDIHTNAYNYKSTFSVEIVPVCKDNLVCLSPKLAQSLGNMNQICICARVTSTIHLIDPSTLQIAEVDGNTYWRYPFNSLFHPKQMEEFIVMDTEIIRD--RKQAAGAGMRSNKHVLAEVWVQKTSEMNTTQQ-YHCRTHLGHLLNPGDLVLGFDLSNCNLNDEFINKMNPHHIPDVVLIKKSY-DRARRQRRRNWKLKEMDRDREGMDTDDERQ---YQDFLEDLEEDELLRKNVNIFKNANVPV--ESDTDEEGAPRISLAEMLEDLH---ISQDATGEEGAGM 501
BLAST of 60s ribosomal export protein nmd3 vs. SwissProt
Match: gi|74858119|sp|Q55BF2.1|NMD3_DICDI (RecName: Full=60S ribosomal export protein NMD3) HSP 1 Score: 448.743 bits (1153), Expect = 3.125e-152 Identity = 225/513 (43.86%), Postives = 325/513 (63.35%), Query Frame = 0 Query: 12 MEYLPATTWVGHEAPSQHNILCCECGVPIPPNPSSTCVQCLRTQVDLSADIPKSVIVHFCKFCERYLNPPNQWVAAALESRELMALCLKKLKNLGKVRLVDAKFVWTEPHSKRLKIKLTIQGEIDGGTILQQTFVVEYVVHFQMCDDCRRVEAKDTWNASVQLRQKSDQKKTLYYLEQLLIKYNITRDCSGIKASPDGLDFFFSSESRARKLTEFLQSMIPIRTQTAKKLISHDMSSNVFNYKYTTSVEVVPICKDNIVCLPPKLAHALGGIGQICVVYKVTHLLHLIDPNTCQFVDVNAGTFFKSAFSSLIRPRNLVEYTVINVEPIADHERRKFSGQGQISKKHVLADVWVTKSSELGVNNDAIHCRSHLGHLLQVGDSVMGFDLKNSNVNDQYLEAVNPN-NLADVILVKKVFGDKSLRNRKRKWRLKHM--EGLHQ------DTASQNEEYCNFLEDLEEDPELRKNVNVYKDPRKMVMGESDSEAGDVPKISLAEMLDEMSLDPVGDD 515 MEY+P Q NILCC CGV IP NPS+ CV C+++QVD++ IPK + + +C+ C RYL PPN W A LESREL+ +C+K++K L KV+LVDA +VWTEPHSKRLK+KLTIQ E+ ILQQ F++E++V Q CD C++ EAKDTWN+ VQLRQK D K+T Y+EQL++K+N IK PDGLDFFFS+ + A K EF+ ++ P++T+ +++LIS D +N NYKYT SVE+VP+ KD+IVCLPPK+AH LG +G + VV KV++L+H IDPNT +++A TF+ S F +L + LVE+TV++V + G ++ L+D+ + +S++ G N++ RSHLG++L GD +G+D+ +SN D L + N L D +LVKK + K+ KR W K + EG+ D ++ E FL ++E DPELR +N+YK+ + + + I + +E++LD + DD Sbjct: 1 MEYIPQV--------KQANILCCMCGVLIPANPSNMCVDCIKSQVDITEGIPKQLTIQWCRGCARYLQPPNHWAIAELESRELLTICIKRIKGLNKVKLVDAGWVWTEPHSKRLKVKLTIQKEVFTSAILQQIFIIEFIVQGQQCDKCQKFEAKDTWNSVVQLRQKVDHKRTFLYIEQLILKHNAHSQTLNIKEKPDGLDFFFSNRNHAMKFVEFISAITPVKTKKSEQLISSDEQNNAANYKYTFSVEIVPLSKDDIVCLPPKIAHQLGNMGPLVVVTKVSNLIHFIDPNTLHTGEISALTFWNSPFRALSSYKQLVEFTVLDV-----------NLTGATRGRYALSDIQLMRSADFGANDNIYDIRSHLGNILNPGDLALGYDVASSNFPDSDLAGMKKNQQLPDFVLVKKTYPSKNDFRFKRHWYFKEIPKEGIENPKKFEIDQMERDRE--EFLREIEADPELRSKINIYKEADAANILQQRIKKMQEHGIDEDAIKEELALDGLLDD 492
BLAST of 60s ribosomal export protein nmd3 vs. SwissProt
Match: gi|308153577|sp|P38861.3|NMD3_YEAST (RecName: Full=60S ribosomal export protein NMD3; AltName: Full=Nonsense-mediated mRNA decay protein 3) HSP 1 Score: 410.994 bits (1055), Expect = 1.296e-137 Identity = 214/532 (40.23%), Postives = 324/532 (60.90%), Query Frame = 0 Query: 12 MEYLPATTWVGHEAPSQHNILCCECGVPIPPNPS-STCVQCLRTQVDLSADIPKSVIVHFCKFCERYLNPPNQWVAAALESRELMALCLKKLKNLGKVRLVDAKFVWTEPHSKRLKIKLTIQGEIDGGTILQQTFVVEYVVHFQMCDDCRRVEAKDTWNASVQLRQKSDQKKTLYYLEQLLIKYNITRDCSGIKASPDGLDFFFSSESRARKLTEFLQSMIPIRTQTAKKLISHDMSSNVFNYKYTTSVEVVPICKDNIVCLPPKLAHALGGIGQICVVYKVTHLLHLIDPNTCQFVDVNAGTFFKSAFSSLIRPRNLVEYTVINVEPIADHERRKFSGQGQISKKHVLADVWVTKSSELGVNNDAIHCRSHLGHLLQVGDSVMGFDLKNSNVNDQYLEAVNPNNLADVILVKKVFGDKSLRNRKRKWRLKHMEGLHQD--------TASQNEE-------YCNFLEDLEEDPELRKNVNVYKDPRKMV----MGESDSEAGDVPKISLAEMLDEMSLDPVGDDATGGDGAQ 523 ME+ P H+ + +LCC CG PI + C C++ VD++ IP+ + FC+ CER+L PP QW+ A LESREL+A+CL++LK L KVRLVDA F+WTEPHS+R++IKLT+QGE TI+QQTF VEY+V C DC R +TW A+VQ+RQK K+T +LEQL++K+N D I + DGLDFF++ ++ A K+ +FL +++PI+ + +++LIS D + YK++ SVE+VPICKD++V LP KLA ++G I Q + K+++ + +DP T Q D++ ++++ F++L LVE+ V++V+ G VLAD+ V ++S+LGVN+ + RSHLG + GDSVMG+ + NSN N + +N + + DV+LVKK++ KS + R W+LK M H+D + +Q +E Y FL++LEED ELR++VN+YK+ V + E D P+I++ E+LDE+ D+ T DG + Sbjct: 1 MEFTPIDP---HQHQNAATLLCCNCGTPIDGSTGLVMCYDCIKLTVDITQGIPREANISFCRNCERFLQPPGQWIRAELESRELLAICLRRLKGLTKVRLVDASFIWTEPHSRRIRIKLTVQGEAMTNTIIQQTFEVEYIVIAMQCPDCARSYTTNTWRATVQIRQKVPHKRTFLFLEQLILKHNAHVDTISISEAKDGLDFFYAQKNHAVKMIDFLNAVVPIKHKKSEELISQDTHTGASTYKFSYSVEIVPICKDDLVVLPKKLAKSMGNISQFVLCSKISNTVQFMDPTTLQTADLSPSVYWRAPFNALADVTQLVEFIVLDVD-----------STGISRGNRVLADITVARTSDLGVNDQVYYVRSHLGGICHAGDSVMGYFIANSNYNSDLFDGLNIDYVPDVVLVKKLYQRKS--KKSRHWKLKRMAKEHKDIDASLDYNSRAQKQEMERAEKDYELFLQELEEDAELRQSVNLYKNREANVPPEEHEMDEDEDEDAPQINIDELLDEL------DEMTLEDGVE 510
BLAST of 60s ribosomal export protein nmd3 vs. SwissProt
Match: gi|1008808731|sp|G0S488.2|NMD3_CHATD (RecName: Full=60S ribosomal export protein NMD3) HSP 1 Score: 400.593 bits (1028), Expect = 1.407e-133 Identity = 214/532 (40.23%), Postives = 322/532 (60.53%), Query Frame = 0 Query: 7 DRSSPMEYLPATTWVGHEAPSQHNILCCECGVPIPPNPSS--TCVQCLRTQVDLSADIPKSVIVHFCKFCERYLNPPNQWVAAALESRELMALCLKKLKNLGKVRLVDAKFVWTEPHSKRLKIKLTIQGEIDGGTILQQTFVVEYVVHFQMCDDCRRVEAKDTWNASVQLRQKSDQKKTLYYLEQLLIKYNITRDCSGIKASPDGLDFFFSSESRARKLTEFLQSMIPIRTQTAKKLISHDMSSNVFNYKYTTSVEVVPICKDNIVCLPPKLAHALGGIGQICVVYKVTHLLHLIDPNTCQFVDVNAGTFFKSAFSSLIRPRNLVEYTVINVEPIADHERRKFSGQGQISKKHVLADVWVTKSSELGVNNDAIHCRSHLGHLLQVGDSVMGFDLKNSNVNDQYLEAVN-----PNNLADVILVKKVFGDKSLRNRKRKWRLKHM---EG----LHQDTASQNEEYCNFLEDLEEDPELRKNVNVYKDPRKMVMGESDSEA---------GDVPKISLAEMLDEMSLDPVGDD 515 D SPM P + A + ILCC CGVPI S+ C C+++ VD+S I + +HFC+ CER+L PP+ WVAAA ESREL++LCLK+L+NLG+VR++DA+FVWTEPHS+R+K+K+TIQ ++ G ++QQ+F V YVV +Q C +C + + W A VQ+RQK K+T LEQL++K+ +D IK DG+DFFF+ ++A FL+S++PI + ++ LIS D + YK+T S E++PIC+D++V LP KLA +G I +C+ Y++ ++L+DPNT ++++ +++ F L ++VE+ V+++E G K VLA+V V ++S+LGVN++ R+HLGHLL GDSVMG+ L +N N +A+ + + DV+LVKK + RNR+R W+LK + EG D A ++EY FL D+EED ELR + +YK+ RK + D++A D PKIS+ E+LD+ + DD Sbjct: 2 DLDSPMGMAP----MMGTARTGATILCCNCGVPIDGTSSAGALCYDCIKSTVDISQGIQREGTLHFCRDCERWLMPPSTWVAAAPESRELLSLCLKRLRNLGRVRIIDARFVWTEPHSRRIKVKITIQDQVSDGVLMQQSFEVVYVVAYQQCRECAKSYTANVWRAVVQVRQKVTHKRTFLLLEQLILKHQAHKDTINIKEEKDGVDFFFAQRNQAEAFVHFLKSVVPITLKDSRHLISQDTHTGDKQYKFTYSAEIIPICRDDLVALPLKLAKQIGNIPPLCLCYRIGTAVYLLDPNTLHTAELSSDVYWRQPFRPLADATSMVEFIVMDIE-----------ATGIRKGKWVLAEVTVARASDLGVNDNVYFTRTHLGHLLHPGDSVMGYMLTGTNFNSDTFDAIENSRQYGSTIPDVVLVKKHYP-NRRRNRRRNWKLKRLPKDEGELLPKATDQARMDDEYEAFLRDVEEDEELRATLALYKNTRKTKKPQQDADAMSIAETEDDDDGPKISMDELLDDFEDLDIQDD 517
BLAST of 60s ribosomal export protein nmd3 vs. nr
Match: gi|225710644|gb|ACO11168.1| (60S ribosomal export protein NMD3 [Caligus rogercresseyi]) HSP 1 Score: 687.182 bits (1772), Expect = 0.000e+0 Identity = 331/497 (66.60%), Postives = 411/497 (82.70%), Query Frame = 0 Query: 21 VGHEAPSQHNILCCECGVPIPPNPSSTCVQCLRTQVDLSADIPKSVIVHFCKFCERYLNPPNQWVAAALESRELMALCLKKLKNLGKVRLVDAKFVWTEPHSKRLKIKLTIQGEIDGGTILQQTFVVEYVVHFQMCDDCRRVEAKDTWNASVQLRQKSDQKKTLYYLEQLLIKYNITRDCSGIKASPDGLDFFFSSESRARKLTEFLQSMIPIRTQTAKKLISHDMSSNVFNYKYTTSVEVVPICKDNIVCLPPKLAHALGGIGQICVVYKVTHLLHLIDPNTCQFVDVNAGTFFKSAFSSLIRPRNLVEYTVINVEPIADHERRKFSGQGQISKKHVLADVWVTKSSELGVNND-AIHCRSHLGHLLQVGDSVMGFDLKNSNVNDQYLEAVNPNNLADVILVKKVFGDKSLRNRKRKWRLKHMEGLH--QDTASQNEEYCNFLEDLEEDPELRKNVNVYKDPRKMVMG-ESDSEAGDVPKISLAEMLDEMSLDPVG 513 VG H ILCC+CG+PI PNP++TCV CLRTQVD++ DIPK V+++FCKFCER LNPP+QW+A +LESR+LMALCLK+LK L KV+LVDA FVWTEPHS+R+K+KL++QGE+ G ILQQTFVVEYVVH QMCDDCRRVEAKDTWNASVQ+RQK++QKKTLYYLEQ+LIKYN T+DCSGIK +GLDFFFSSES ARKL EFL ++IPIR AKKLISHD +SN +NYKYT SVEV PICKDNIVCLP KLAH+LGG+GQI + YKV+++LHLID N+CQF ++NA ++F++ F SL P++L E+TV+N+E I D ERRKF GQG ISKKHVLAD WV KSSELG NND +HCR+HLG +LQ+GDSVMGFDLKNSNVN+ LE ++ + + DV+LVKKV+ KS+RNR+RKWRL+HM+GLH + S N E +FLED+EED ELRK++N+YKDP+K+ + + D + ++P +SLAEML+ SL+P Sbjct: 4 VGAIKEDTHKILCCQCGIPIDPNPANTCVGCLRTQVDITEDIPKQVVLNFCKFCERCLNPPSQWIACSLESRDLMALCLKRLKGLSKVKLVDANFVWTEPHSRRIKVKLSVQGEVISGAILQQTFVVEYVVHNQMCDDCRRVEAKDTWNASVQVRQKTNQKKTLYYLEQVLIKYNATKDCSGIKVVHEGLDFFFSSESNARKLVEFLGTVIPIRYHHAKKLISHDTNSNTYNYKYTFSVEVSPICKDNIVCLPSKLAHSLGGMGQIALAYKVSNILHLIDFNSCQFAEINATSYFRNPFLSLTGPKSLAEFTVMNIEIIPDLERRKFKGQGAISKKHVLADCWVVKSSELGRNNDEGVHCRTHLGRILQIGDSVMGFDLKNSNVNNPELEEISEHKIPDVVLVKKVYAQKSVRNRRRKWRLRHMDGLHGTKSLCSDNPEMTDFLEDIEEDVELRKHINIYKDPKKLSIPVDQDEDDTEIPGVSLAEMLESFSLNPAA 500
BLAST of 60s ribosomal export protein nmd3 vs. nr
Match: gi|1325271513|ref|XP_023320366.1| (60S ribosomal export protein NMD3-like [Eurytemora affinis]) HSP 1 Score: 682.174 bits (1759), Expect = 0.000e+0 Identity = 321/497 (64.59%), Postives = 397/497 (79.88%), Query Frame = 0 Query: 12 MEYLPATTWVGHEAPSQHNILCCECGVPIPPNPSSTCVQCLRTQVDLSADIPKSVIVHFCKFCERYLNPPNQWVAAALESRELMALCLKKLKNLGKVRLVDAKFVWTEPHSKRLKIKLTIQGEIDGGTILQQTFVVEYVVHFQMCDDCRRVEAKDTWNASVQLRQKSDQKKTLYYLEQLLIKYNITRDCSGIKASPDGLDFFFSSESRARKLTEFLQSMIPIRTQTAKKLISHDMSSNVFNYKYTTSVEVVPICKDNIVCLPPKLAHALGGIGQICVVYKVTHLLHLIDPNTCQFVDVNAGTFFKSAFSSLIRPRNLVEYTVINVEPIADHERRKFSGQGQISKKHVLADVWVTKSSELGVNNDAIHCRSHLGHLLQVGDSVMGFDLKNSNVNDQYLEAVNPNNLADVILVKKVFGDKSLRNRKRKWRLKHMEGL-HQDTASQNEEYCNFLEDLEEDPELRKNVNVYKDPRKMVMGESDSEAGDVPKISLAEMLDEM 507 ME LP V ILCCECG PI PNP++ CV CLRTQVD++ IPK V +HFCKFC+RYLNPP QWVAAALESRELMALCLKKLKNL KV+L+DA F+WTEPHSKR+K+KL IQ E+ GG ILQQTFVVEYVV +QMC DC RVEAKD WNA VQ+RQK+ Q+KTL+Y+EQLL+KY T+DC GIK +GLDF++S+ES A+KL EF QSMIPIR+Q +K+LISHD+ S +NYKYT SV+VVP+CKDN+VCL + AH LGGIGQICVV KV+ +HLIDPNTCQ+VD+ A +FK+ F SL R R+LVE+TVIN+EPI +R+ FSGQG+IS+KHVLAD WV KSSELG+N+D IHCR++LGH+L +GDSV+G DLKNSNVN+ LE ++ + + DV+LVKK F DK+LRNRKRKW+LKHMEG H +T S N+E+ +F DLEEDP LR+NVN+Y D R + + D + + P+I+LAEMLD++ Sbjct: 1 MEQLPEENLVKVAG----KILCCECGTPIDPNPANLCVACLRTQVDITEGIPKQVTLHFCKFCDRYLNPPQQWVAAALESRELMALCLKKLKNLAKVKLIDANFLWTEPHSKRIKVKLAIQAEVLGGAILQQTFVVEYVVAYQMCTDCHRVEAKDHWNALVQIRQKTQQRKTLFYVEQLLLKYGATKDCVGIKPHHEGLDFYYSTESAAKKLLEFFQSMIPIRSQNSKRLISHDVHSGTYNYKYTFSVDVVPVCKDNVVCLSKQQAHVLGGIGQICVVNKVSQAVHLIDPNTCQYVDITAAVYFKAPFLSLCRQRDLVEFTVINIEPITQKDRKTFSGQGKISQKHVLADCWVVKSSELGMNDDPIHCRTYLGHVLNIGDSVLGLDLKNSNVNNPELEKLSTDKMPDVVLVKKHFADKALRNRKRKWKLKHMEGFPHMETESCNDEFADFANDLEEDPTLRQNVNIYLD-RNKIPVDEDEDDDECPQITLAEMLDDL 492
BLAST of 60s ribosomal export protein nmd3 vs. nr
Match: gi|443730657|gb|ELU16081.1| (hypothetical protein CAPTEDRAFT_174567 [Capitella teleta]) HSP 1 Score: 603.979 bits (1556), Expect = 0.000e+0 Identity = 276/497 (55.53%), Postives = 378/497 (76.06%), Query Frame = 0 Query: 31 ILCCECGVPIPPNPSSTCVQCLRTQVDLSADIPKSVIVHFCKFCERYLNPPNQWVAAALESRELMALCLKKLKNLGK-VRLVDAKFVWTEPHSKRLKIKLTIQGEIDGGTILQQTFVVEYVVHFQMCDDCRRVEAKDTWNASVQLRQKSDQKKTLYYLEQLLIKYNITRDCSGIKASPDGLDFFFSSESRARKLTEFLQSMIPIRTQTAKKLISHDMSSNVFNYKYTTSVEVVPICKDNIVCLPPKLAHALGGIGQICVVYKVTHLLHLIDPNTCQFVDVNAGTFFKSAFSSLIRPRNLVEYTVINVEPIADHERRKFSGQGQISKKHVLADVWVTKSSELGVNNDAIHCRSHLGHLLQVGDSVMGFDLKNSNVNDQYLEAVNPNNLADVILVKKVFGDKSLRNRKRKWRLKHMEGLHQ-DTASQNEEYCNFLEDLEEDPELRKNVNVYKDPRKM-VMGESDSEAGDVPKISLAEMLDEMSLDPVGDDATGGDGAQM 524 ILCC+CG I PNP++ CV CLR QVD+S IPK ++HFC+ CERYL PP+ W+ AALESREL+A+CLKK+K + K VRLVDA F+WTEPHSKRLK+K+TIQ E+ G +LQQ F+VE+VVH QMC+DC RVEAKD W A VQ+RQK+ KKTL+YLEQL++K+ + + IK DGLDF++ ++ AR+L +FL S++P R+ AK+LISHD+ SNV+NYK + S E+VP+CKDN+VC+ KLA +LG +GQICVV +VT +HLIDPNTCQ +VN ++++ F SL PR LVEYTV+++EPI D +R+ +G G +S KH+LADV+V K+SELG + +HCRSHLGHLLQ GD+V+GFD++N+N N+++LE + + DV+LVKK++ D + R R+RKW+LKH++ H+ DT S N +Y +FLEDLEEDP R+ +N+YKD K+ V E +S+ D P+ISL EM++++ + +DATG +GA M Sbjct: 15 ILCCQCGTQIEPNPANMCVACLRAQVDISEGIPKQAVLHFCRQCERYLQPPSCWLKAALESRELLAVCLKKVKGINKEVRLVDAGFIWTEPHSKRLKVKMTIQKEVMNGAVLQQVFIVEFVVHNQMCEDCHRVEAKDYWRACVQIRQKTTHKKTLFYLEQLMLKHGAHANSTSIKQVHDGLDFYYGAQQDARRLVDFLSSVVPCRSSFAKELISHDIHSNVYNYKISFSAEIVPVCKDNVVCVGSKLAQSLGNLGQICVVLRVTQAVHLIDPNTCQIAEVNGEKYWRNPFLSLCDPRQLVEYTVMDIEPIMDKDRKHVAGGGAVSHKHILADVYVIKNSELGTTAEQVHCRSHLGHLLQPGDTVLGFDVRNANHNNEHLEKMKSERIPDVVLVKKLYSDSTKRARRRKWKLKHIDAAHEMDTDSVNRDYNDFLEDLEEDPASRQQINIYKDEAKIAVEPEYESDNEDAPQISLMEMMEDLK---ISEDATGEEGAAM 508
BLAST of 60s ribosomal export protein nmd3 vs. nr
Match: gi|321473431|gb|EFX84398.1| (hypothetical protein DAPPUDRAFT_194355 [Daphnia pulex]) HSP 1 Score: 590.112 bits (1520), Expect = 0.000e+0 Identity = 274/508 (53.94%), Postives = 377/508 (74.21%), Query Frame = 0 Query: 12 MEYLPATTWVGHEAPSQHNILCCECGVPIPPNPSSTCVQCLRTQVDLSADIPKSVIVHFCKFCERYLNPPNQWVAAALESRELMALCLKKLKNLGKVRLVDAKFVWTEPHSKRLKIKLTIQGEIDGGTILQQTFVVEYVVHFQMCDDCRRVEAKDTWNASVQLRQKSDQKKTLYYLEQLLIKYNITRDCSGIKASPDGLDFFFSSESRARKLTEFLQSMIPIRTQTAKKLISHDMSSNVFNYKYTTSVEVVPICKDNIVCLPPKLAHALGGIGQICVVYKVTHLLHLIDPNTCQFVDVNAGTFFKSAFSSLIRPRNLVEYTVINVEPIADHERRKFSGQGQISKKHVLADVWVTKSSELGVNNDAIHCRSHLGHLLQVGDSVMGFDLKNSNVNDQYLEAVNPNNLADVILVKKVFGDKSLRNRKRKWRLKHMEGLHQDTASQNEEYCNFLEDLEEDPELRKNVNVYKDPRK----MVMGESDSEAGDVPKISLAEMLDEMSLDPVGDD 515 MEY+ + E+ ILCC+CG PI PNP++ CV CLRTQVD+S IPK +++FCK CERYL PP QW+ +LESREL+ LCL KLK L +VRL+DA FVWTEPHSKR+K+KLTIQ E+ GG +LQQ F+V++VV+ Q C+DC RVEAKD W A+VQ+RQK+D KKT YYLEQL++K+ GIK + +G+DFF+++E +A+K+ +FL S++P R Q +K +IS D+ SN +N K+T SVE+VP+CKD +VCLP KLAH LGGIGQICVV +V+ +HLIDP + Q +VN+ T++++ F++L + L EY V+++E I DHE+R F+GQG +S KHVLADV+V + +E+G N IH R+HLGHLL+ GD VMG+DL N NVND + +N N+ DV+LVKK++ DKS+RNR+RK++L+H++ D S N +Y +FLEDLEEDP R+N+N+YKD RK + +GE D E +P+I+L EMLD++ +GD+ Sbjct: 1 MEYMEEGS---EESSLACKILCCQCGTPIEPNPANMCVACLRTQVDISEGIPKQAVIYFCKGCERYLQPPEQWIKCSLESRELLGLCLAKLKGLNRVRLIDAGFVWTEPHSKRIKVKLTIQAEVLGGAVLQQVFIVDFVVNGQFCEDCHRVEAKDFWKANVQVRQKTDHKKTFYYLEQLILKHKAHESTLGIKPTHEGIDFFYANEGQAKKMLDFLTSVVPCRYQVSKTVISQDIHSNTYNCKFTYSVEIVPVCKDCVVCLPAKLAHQLGGIGQICVVQRVSSTIHLIDPFSGQIAEVNSNTYWRTPFNALSGTKQLAEYVVMDIEVIRDHEKRTFAGQGAMSYKHVLADVYVCRPNEMGTNE--IHTRTHLGHLLKPGDIVMGYDLANCNVNDDNFDKMNRENMPDVVLVKKMYADKSVRNRRRKFKLRHLDADGMDVTSVNRDYTDFLEDLEEDPAFRQNINIYKDERKVGFAVEVGEPDEE---IPQITLQEMLDDLH---IGDE 497
BLAST of 60s ribosomal export protein nmd3 vs. nr
Match: gi|749776984|ref|XP_011143393.1| (PREDICTED: 60S ribosomal export protein NMD3 [Harpegnathos saltator] >gi|307202686|gb|EFN81992.1| 60S ribosomal export protein NMD3 [Harpegnathos saltator]) HSP 1 Score: 585.104 bits (1507), Expect = 0.000e+0 Identity = 263/483 (54.45%), Postives = 367/483 (75.98%), Query Frame = 0 Query: 31 ILCCECGVPIPPNPSSTCVQCLRTQVDLSADIPKSVIVHFCKFCERYLNPPNQWVAAALESRELMALCLKKLKNLGKVRLVDAKFVWTEPHSKRLKIKLTIQGEIDGGTILQQTFVVEYVVHFQMCDDCRRVEAKDTWNASVQLRQKSDQKKTLYYLEQLLIKYNITRDCSGIKASPDGLDFFFSSESRARKLTEFLQSMIPIRTQTAKKLISHDMSSNVFNYKYTTSVEVVPICKDNIVCLPPKLAHALGGIGQICVVYKVTHLLHLIDPNTCQFVDVNAGTFFKSAFSSLIRPRNLVEYTVINVEPIADHERRKFSGQGQISKKHVLADVWVTKSSELGVNNDAIHCRSHLGHLLQVGDSVMGFDLKNSNVNDQYLEAVNPNNLADVILVKKVFG-DKSLRNRKRKWRLKHMEGLHQDTASQNEEYCNFLEDLEEDPELRKNVNVYKDPRKMVMGESDSEAGDVPKISLAEMLDEMSLDPV 512 ILCCECG PI PNP++ CV CLRT VD++ IPK +HFCK CERYL PP +W+ A LES+ELM++CLKKLK L +V+LVDA FVWTEPHSKRLK+KLT+ GE GG +LQQ FVVEY+V+ QMCDDC R EAKD W ASVQ+RQK+ KKT +YLEQL++K+ GIK +GLDFF+++E+ ARK+ +FLQ++IP R Q +KKLISHD+ SN++NYK+T SVE+VP+ KD++VCLP KL LGGI IC+VYK+T+ +HLID ++ Q +V+A +++ +F S+ P+ L EY V+++E I +++ F GQG IS KHV+ADVW+ K+SELG+N+++ H R+HLGH+L+ GDSV+G+ LK+SN+ND + +N + + D+ILVKK +G DK+ R R R W+LKH+ +++N EY FL++LEEDPELR+N+N+++DPRK + +++ +P+I+L EMLD++ L+ V Sbjct: 16 ILCCECGTPIEPNPANMCVGCLRTHVDITEGIPKQATLHFCKGCERYLQPPVEWIHAPLESKELMSICLKKLKGLNRVKLVDASFVWTEPHSKRLKVKLTVHGEAIGGVVLQQVFVVEYIVNHQMCDDCHRAEAKDYWRASVQVRQKAINKKTFFYLEQLILKHKAHEQTLGIKPIHEGLDFFYANEATARKMVDFLQTVIPCRYQHSKKLISHDIHSNIYNYKFTYSVEIVPVSKDSVVCLPRKLTQQLGGITPICLVYKITNSVHLIDVSSGQIAEVSATVYWRHSFKSICNPKQLTEYIVMDIELIKHEDKKIFPGQGSISNKHVIADVWLVKASELGINDNSTHARTHLGHVLKPGDSVLGYTLKDSNINDANFDKLNGDTIPDIILVKKFYGYDKAARRRARVWKLKHIADEVVSMSTENNEYNEFLDELEEDPELRQNINIFRDPRKQIPVDTNEIDPSIPQITLEEMLDDLVLEDV 498
BLAST of 60s ribosomal export protein nmd3 vs. nr
Match: gi|1061487436|gb|ODN04506.1| (60S ribosomal export protein NMD3 [Orchesella cincta]) HSP 1 Score: 582.793 bits (1501), Expect = 0.000e+0 Identity = 278/498 (55.82%), Postives = 361/498 (72.49%), Query Frame = 0 Query: 12 MEYLPATTWVGHEAPSQHNILCCECGVPIPPNPSSTCVQCLRTQVDLSADIPKSVIVHFCKFCERYLNPPNQWVAAALESRELMALCLKKLKNLGKVRLVDAKFVWTEPHSKRLKIKLTIQGEIDGGTILQQTFVVEYVVHFQMCDDCRRVEAKDTWNASVQLRQKSDQKKTLYYLEQLLIKYNITRDCSGIKASPDGLDFFFSSESRARKLTEFLQSMIPIRTQTAKKLISHDMSSNVFNYKYTTSVEVVPICKDNIVCLPPKLAHALGGIGQICVVYKVTHLLHLIDPNTCQFVDVNAGTFFKSAFSSLIRPRNLVEYTVINVEPIADHERRKFSGQGQISKKHVLADVWVTKSSELGVNNDAIHCRSHLGHLLQVGDSVMGFDLKNSNVNDQYLEAVNPNNLADVILVKKVFGDKSLRNRKRKWRLKHMEGLHQDTASQNEEYCNFLEDLEEDPELRKNVNVYKDPRKMVMGESDSEAGDVPKISLAEMLDEMSL 509 MEYL + ++A + ILCC+CG I PNP++ CV C+RTQVD++ADIPK + C+ CERY PP QWV ALESREL+ LCLK+LK L K+RLVDA F+WTEPHSKR+K+KLT+Q E+ GG +LQQ F VEY + QMCD+CRR +AKD W A VQ+RQKSDQKKTLYYLEQL++KY ++ +G+K DGLDF++ +E ARK+ EFL M+P R Q +KKLISHD +N +NYK+T VE+VPICKD+IVCLP AH LGGIGQICVV++VT+ +H+IDPNT Q ++NA F++S F +L +NL E+ V+ VE I +R KFSGQG IS KH DV+V K++ LG N IHCRSHLGHLL GD+V+GFD+ N+NVND E + P + D+ILVKKV+ D+ +KR+W+L+H H DT S N +Y FL+DLEEDP R+ VN+YK+ + V + + GD PKISL EMLD+++L Sbjct: 1 MEYLSSPE--ENQAATPGKILCCQCGTLIDPNPANMCVPCIRTQVDITADIPKQGTLAACRGCERYFQPPAQWVKCALESRELLGLCLKRLKGLNKLRLVDAGFIWTEPHSKRIKVKLTVQAEVMGGAVLQQVFTVEYTIINQMCDECRRADAKDYWKALVQVRQKSDQKKTLYYLEQLVLKYKAHKNTNGVKPHHDGLDFYYGNEQNARKMVEFLTQMLPCRYQHSKKLISHDTHNNTYNYKFTYCVELVPICKDSIVCLPKSFAHQLGGIGQICVVHRVTNFVHIIDPNTAQVAEINATQFWRSPFGTLCSSKNLTEFLVMEVEAIT--KRAKFSGQGSISSKHTPVDVYVVKANALGEN--PIHCRSHLGHLLNPGDTVLGFDMGNTNVNDPNFEKMKPETIPDIILVKKVYPDQK---QKRRWKLRHFLPKH-DTESLNRDYEGFLQDLEEDPAYREGVNIYKNEKLNVESATTDDEGDAPKISLQEMLDDLTL 488
BLAST of 60s ribosomal export protein nmd3 vs. nr
Match: gi|591376946|ref|XP_007063139.1| (PREDICTED: 60S ribosomal export protein NMD3-like [Chelonia mydas]) HSP 1 Score: 582.022 bits (1499), Expect = 0.000e+0 Identity = 281/515 (54.56%), Postives = 375/515 (72.82%), Query Frame = 0 Query: 12 MEYLPATTWVGHEAPSQHNILCCECGVPIPPNPSSTCVQCLRTQVDLSADIPKSVIVHFCKFCERYLNPPNQWVAAALESRELMALCLKKLK-NLGKVRLVDAKFVWTEPHSKRLKIKLTIQGEIDGGTILQQTFVVEYVVHFQMCDDCRRVEAKDTWNASVQLRQKSDQKKTLYYLEQLLIKYNITRDCSGIKASPDGLDFFFSSESRARKLTEFLQSMIPIRTQTAKKLISHDMSSNVFNYKYTTSVEVVPICKDNIVCLPPKLAHALGGIGQICVVYKVTHLLHLIDPNTCQFVDVNAGTFFKSAFSSLIRPRNLVEYTVINVEPIADHERRKFSGQGQISKKHVLADVWVTKSSELGVNNDAIHCRSHLGHLLQVGDSVMGFDLKNSNVNDQYLEAVNPNNLADVILVKKVFGDKSLRNRKRKWRLKHMEGLHQDTASQNE-EYCNFLEDLEEDPELRKNVNVYKDPRKMVMGESDSEAGDVPKISLAEMLDEMSLDPVGDDATGGDGAQM 524 MEY+ A APSQ NILCC+CG+PI PNP++ CV CLRTQVD++ IPK V VHFCK CERYL PP WV ALESREL+ LCLKK+K +L KVRL++A FVWTEPHS+RLKIKLT+Q E+ G ILQQ FVVEYVV QMCDDC RVEAKD W A VQ+RQK+ KKT YYLEQL++K+ + ++ IK DGLDF++ S+ A+K+ +FLQ +P R++++++LISHD+ SN +NYK T SVE+VP+CKDN+VCL PKLA +LG + QICV +VT +HLIDPNT Q D++ TF++ F+SL P+ L E+ VI++ + ER++ +G G S KH LA+ WV K+SE+ +N CR+HLGHLL GD V+GFDL N N+ND++ +NP+N+ DV+L+KK + D++ R R+R W+LK +E + + +E +Y +FLEDLEED +R+NVN+YKD R V ESD++ P+ISLAEML+E+ + DATGG+G+ M Sbjct: 1 MEYMKAPV-----APSQGNILCCQCGIPITPNPANMCVACLRTQVDITEGIPKQVTVHFCKQCERYLQPPGTWVQCALESRELLTLCLKKIKASLSKVRLIEASFVWTEPHSRRLKIKLTVQKEVMNGAILQQVFVVEYVVQPQMCDDCHRVEAKDFWKAVVQVRQKTLHKKTFYYLEQLILKHRLHQNTLRIKEIHDGLDFYYGSKQHAQKMVDFLQCTVPSRSKSSQRLISHDIHSNAYNYKSTFSVEIVPVCKDNVVCLSPKLAQSLGNMSQICVCIRVTSTVHLIDPNTLQIADIDGNTFWRHPFNSLFHPKQLEEFIVIDITRV--QERKQGAGAGMRSNKHTLAEAWVQKTSEMNTDNQYF-CRTHLGHLLNPGDLVLGFDLANCNLNDEFANKMNPHNVPDVVLIKKSY-DRTKRQRRRNWKLKELERDREGMDTDDERQYQDFLEDLEEDEAIRRNVNIYKDSRIPV--ESDTDDEGAPRISLAEMLEELH---ISQDATGGEGSDM 501
BLAST of 60s ribosomal export protein nmd3 vs. nr
Match: gi|1351572646|ref|XP_024070670.1| (60S ribosomal export protein NMD3 [Terrapene mexicana triunguis]) HSP 1 Score: 581.637 bits (1498), Expect = 0.000e+0 Identity = 281/515 (54.56%), Postives = 375/515 (72.82%), Query Frame = 0 Query: 12 MEYLPATTWVGHEAPSQHNILCCECGVPIPPNPSSTCVQCLRTQVDLSADIPKSVIVHFCKFCERYLNPPNQWVAAALESRELMALCLKKLK-NLGKVRLVDAKFVWTEPHSKRLKIKLTIQGEIDGGTILQQTFVVEYVVHFQMCDDCRRVEAKDTWNASVQLRQKSDQKKTLYYLEQLLIKYNITRDCSGIKASPDGLDFFFSSESRARKLTEFLQSMIPIRTQTAKKLISHDMSSNVFNYKYTTSVEVVPICKDNIVCLPPKLAHALGGIGQICVVYKVTHLLHLIDPNTCQFVDVNAGTFFKSAFSSLIRPRNLVEYTVINVEPIADHERRKFSGQGQISKKHVLADVWVTKSSELGVNNDAIHCRSHLGHLLQVGDSVMGFDLKNSNVNDQYLEAVNPNNLADVILVKKVFGDKSLRNRKRKWRLKHMEGLHQDTASQNE-EYCNFLEDLEEDPELRKNVNVYKDPRKMVMGESDSEAGDVPKISLAEMLDEMSLDPVGDDATGGDGAQM 524 MEY+ APSQ NILCC+CG+PIPPNP++ CV CLRTQVD++ IPK V VHFCK CERYL PP WV ALESREL+ LCLKK+K +L KVRL++A FVWTEPHS+RLKIKLT+Q E+ G ILQQ FVVEYVV QMCDDC RVEAKD W A VQ+RQK+ KKT YYLEQL++K+ + ++ IK DGLDF++ S+ A+K+ +FLQ +P R++++++LISHD+ SN +NYK T SVE+VPICKDN+VCL PKLA +LG + QICV +VT +HLIDPNT Q D++ T+++ F+SL P+ L E+ VI++ + ER++ +G G S KH LA+ WV K+SE+ +N CR+HLGHLL GD V+GFDL N N+ND++ +NP+N+ DV+L+KK + D++ R R+R W+LK +E + + +E +Y +FLEDLEED +RKNVN+YKD + V ESD++ P+ISLAEML+E+ + DATGG+G+ M Sbjct: 1 MEYMKEPV-----APSQGNILCCQCGIPIPPNPANMCVACLRTQVDITEGIPKQVTVHFCKQCERYLQPPGTWVQCALESRELLTLCLKKIKASLSKVRLIEASFVWTEPHSRRLKIKLTVQKEVMNGAILQQVFVVEYVVQPQMCDDCHRVEAKDFWKAVVQVRQKTLHKKTFYYLEQLILKHRLHQNTLRIKEIHDGLDFYYGSKQHAQKMVDFLQCTVPSRSKSSQRLISHDIHSNAYNYKSTFSVEIVPICKDNVVCLSPKLAQSLGNMSQICVCIRVTSTIHLIDPNTLQIADIDGNTYWRHPFNSLFHPKQLEEFIVIDITRV--QERKQGAGAGMRSNKHTLAEAWVQKTSEMNTDNQYF-CRTHLGHLLNPGDLVLGFDLANCNLNDEFANKMNPHNVPDVVLIKKSY-DRTKRQRRRNWKLKELERDREGMDTDDERQYQDFLEDLEEDEAIRKNVNIYKDSKIPV--ESDTDDEGAPRISLAEMLEELH---ISQDATGGEGSDM 501
BLAST of 60s ribosomal export protein nmd3 vs. nr
Match: gi|926640604|ref|XP_013786404.1| (60S ribosomal export protein NMD3-like [Limulus polyphemus]) HSP 1 Score: 581.637 bits (1498), Expect = 0.000e+0 Identity = 282/515 (54.76%), Postives = 381/515 (73.98%), Query Frame = 0 Query: 12 MEYLPATTWVGHEAPSQHN-ILCCECGVPIPPNPSSTCVQCLRTQVDLSADIPKSVIVHFCKFCERYLNPPNQWVAAALESRELMALCLKKLKNLGKVRLVDAKFVWTEPHSKRLKIKLTIQGEIDGGTILQQTFVVEYVVHFQMCDDCRRVEAKDTWNASVQLRQKSDQKKTLYYLEQLLIKYNITRDCSGIKASPDGLDFFFSSESRARKLTEFLQSMIPIRTQTAKKLISHDMSSNVFNYKYTTSVEVVPICKDNIVCLPPKLAHALGGIGQICVVYKVTHLLHLIDPNTCQFVDVNAGTFFKSAFSSLIRPRNLVEYTVINVEPIADHERRKFSGQGQISKKHVLADVWVTKSSELGVNNDAIHCRSHLGHLLQVGDSVMGFDLKNSNVNDQYLEAVNPNNLADVILVKKVFGDKSLRNRKRKWRLKHME-GLHQDTASQNEEYCNFLEDLEEDPELRKNVNVYKDPRKMVMGESDSEAGDVPKISLAEMLDEMSLDPVGDDATGGDGAQM 524 ME+L G PS+ N ILCC+CG I PNP++ C+ C+RT VD++ IPK ++FCK CERYL PP QW+ ALESREL+ALCLKKLK L K+RL+DA FVWTEPHS+R+K+KLT+Q E+ GG +LQQ FVVEY V+ QMC DC R EAKD W A VQ+RQK++ KKT +YLEQL++K+ + ++C +KAS +GLDFFF ARK EFLQ+++P R+ T++ L+SHD +N FNYKYT SVE+VPICKD++VCLP LA +LG IGQICV ++T +HL+DP T Q ++N T++++ F SL + L+EYTV++VE I D +++ F+GQG +S KHVLADVW+ +SSELG +D IHCR+HLGH+L+ GD+V+GFDL N+N+N+ + E + + + DV+LVKKV+GDK+ R RKRKW+L+ M + DT+S N ++ +FLEDLEEDPE RKNVN+Y D K+ + D + +P+I+L EMLD++SL DATG DG M Sbjct: 1 MEFL-----TGQVEPSKGNKILCCQCGTAIEPNPANMCIACIRTHVDITEGIPKQATLYFCKSCERYLQPPAQWIVCALESRELLALCLKKLKGLSKIRLIDAGFVWTEPHSRRIKVKLTVQKEVFGGAVLQQVFVVEYTVNTQMCPDCHRNEAKDYWRAVVQVRQKTEHKKTFFYLEQLILKHKVHQNCLYLKASHEGLDFFFDKRDDARKFMEFLQAVVPSRSITSQHLVSHDPQNNTFNYKYTFSVEIVPICKDDVVCLPLSLARSLGNIGQICVCVQITSTVHLVDPTTLQVAEINGQTYWRTPFYSLSSLKQLIEYTVMDVEMIMDADKKTFAGQGPLSTKHVLADVWLVRSSELGTVSDHIHCRTHLGHILKPGDAVLGFDLANANINNPHFEKLKNDRIPDVVLVKKVYGDKARRTRKRKWKLQRMNTDMDTDTSSVNRDFTDFLEDLEEDPEYRKNVNIYVDRDKLAVDSDDMDDEGMPQITLQEMLDDLSL---AIDATGNDGDAM 507
BLAST of 60s ribosomal export protein nmd3 vs. nr
Match: gi|951533268|ref|XP_014470389.1| (PREDICTED: 60S ribosomal export protein NMD3 [Dinoponera quadriceps]) HSP 1 Score: 581.252 bits (1497), Expect = 0.000e+0 Identity = 255/483 (52.80%), Postives = 367/483 (75.98%), Query Frame = 0 Query: 31 ILCCECGVPIPPNPSSTCVQCLRTQVDLSADIPKSVIVHFCKFCERYLNPPNQWVAAALESRELMALCLKKLKNLGKVRLVDAKFVWTEPHSKRLKIKLTIQGEIDGGTILQQTFVVEYVVHFQMCDDCRRVEAKDTWNASVQLRQKSDQKKTLYYLEQLLIKYNITRDCSGIKASPDGLDFFFSSESRARKLTEFLQSMIPIRTQTAKKLISHDMSSNVFNYKYTTSVEVVPICKDNIVCLPPKLAHALGGIGQICVVYKVTHLLHLIDPNTCQFVDVNAGTFFKSAFSSLIRPRNLVEYTVINVEPIADHERRKFSGQGQISKKHVLADVWVTKSSELGVNNDAIHCRSHLGHLLQVGDSVMGFDLKNSNVNDQYLEAVNPNNLADVILVKKVFG-DKSLRNRKRKWRLKHMEGLHQDTASQNEEYCNFLEDLEEDPELRKNVNVYKDPRKMVMGESDSEAGDVPKISLAEMLDEMSLDPV 512 ILCCECG PI PNP++ CV CLRT VD++ IPK +HFCK CERYL PP +W+ A LES+ELM+LCLKKLK L +V+L+DA FVWTEPHSKRLK+KLT+ GE GG +LQQ F+VEY+V+ QMCDDC R EAKD W ASVQ+RQK+ KKT +YLEQL++K+ GIK +GLDFF+++E+ ARK+ +FLQ++IP R Q +KKL+SHD+ SN++NYK+T SVE+VP+ KD++VCLP KL LGGI IC+VY++T+ +HL+D ++ Q +V+ +++ AF+S+ P+ L EY V+++EPI +++ F GQG +S KHV+ADVW+ K+SELG+N+++ H R+HLGH+L+ GDSV+G+ LK+SN+ND + +N + + D++LVKK +G DK+ R R R W+LKH+ +++N EY FL++LEEDPE+R+N+N+++D RK + +++ +P+I+L EMLD++ ++ V Sbjct: 16 ILCCECGTPIEPNPANMCVACLRTHVDITEGIPKQATLHFCKGCERYLQPPAEWIHATLESKELMSLCLKKLKGLNRVKLIDAGFVWTEPHSKRLKVKLTVHGEAIGGVVLQQIFIVEYIVNHQMCDDCHRTEAKDYWRASVQVRQKATNKKTFFYLEQLILKHKAHEQTLGIKPIHEGLDFFYANEATARKMVDFLQTVIPCRYQHSKKLLSHDIHSNIYNYKFTYSVEIVPVSKDSVVCLPRKLTQQLGGISPICLVYRITNSVHLMDVSSGQIAEVSTTLYWRHAFNSICNPKQLTEYVVMDIEPIKHEDKKIFPGQGSVSNKHVIADVWLVKASELGINDNSTHARTHLGHVLKPGDSVLGYALKDSNINDANFDKLNGDTIPDIVLVKKFYGYDKAARRRARVWKLKHIADEVISMSTENNEYNEFLDELEEDPEMRQNINIFRDTRKQIPVDTNEIDPSIPQITLEEMLDDLVIEDV 498 The following BLAST results are available for this feature:
BLAST of 60s ribosomal export protein nmd3 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 1
BLAST of 60s ribosomal export protein nmd3 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 11
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BLAST of 60s ribosomal export protein nmd3 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold476_size161517:48107..58940+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold476_size161517-snap-gene-0.33 ID=maker-scaffold476_size161517-snap-gene-0.33|Name=60s ribosomal export protein nmd3|organism=Tigriopus kingsejongensis|type=gene|length=10834bp|location=Sequence derived from alignment at scaffold476_size161517:48107..58940+ (Tigriopus kingsejongensis)back to top Synonyms
The feature '60s ribosomal export protein nmd3' has the following synonyms
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