acetylcholine receptor subunit alpha-like, maker-scaffold47_size466558-snap-gene-3.40 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of acetylcholine receptor subunit alpha-like vs. L. salmonis genes
Match: EMLSAG00000005313 (supercontig:LSalAtl2s:LSalAtl2s283:621537:765197:1 gene:EMLSAG00000005313 transcript:EMLSAT00000005313 description:"maker-LSalAtl2s283-snap-gene-6.12") HSP 1 Score: 285.419 bits (729), Expect = 1.914e-96 Identity = 136/163 (83.44%), Postives = 141/163 (86.50%), Query Frame = 0 Query: 102 HGRTLLNAGNPDAKRLYDDLLSNYNKLVRPVVNTTDPLTVRIKLKLSQLIDV---------------FWFDYKLVWDPSEYGGVQQLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLSYNGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGF 249 RT+LNAGNPDAKRLYDDLLSNYNKLVRPV+NTTDPL VRIKLKLSQLIDV +WFDYKL WDP EYGGV+QLHVPSDHIWRPDIVLYNNADGNFEVTLATKA L +NGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGF Sbjct: 41 QARTVLNAGNPDAKRLYDDLLSNYNKLVRPVINTTDPLLVRIKLKLSQLIDVNLKNQIMTTNLWVEQYWFDYKLKWDPEEYGGVRQLHVPSDHIWRPDIVLYNNADGNFEVTLATKAXLWFNGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGF 203
BLAST of acetylcholine receptor subunit alpha-like vs. L. salmonis genes
Match: EMLSAG00000001002 (supercontig:LSalAtl2s:LSalAtl2s116:424821:428389:1 gene:EMLSAG00000001002 transcript:EMLSAT00000001002 description:"maker-LSalAtl2s116-snap-gene-4.16") HSP 1 Score: 252.677 bits (644), Expect = 4.033e-81 Identity = 119/157 (75.80%), Postives = 130/157 (82.80%), Query Frame = 0 Query: 108 NAGNPDAKRLYDDLLSNYNKLVRPVVNTTDPLTVRIKLKLSQLIDV---------------FWFDYKLVWDPSEYGGVQQLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLSYNGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGF 249 + GNPDAKRLYDDLLSNYNKLVRPVVN +D +TV++KLKLSQLIDV FW+DYK+ W+P EYGGV LHVPSDHIWRPDIVLYNNADGNFEVTL+TKATL GLV W+PPAIY SSCE+DVEYFPFDEQTCVMKFGSWTYDGF Sbjct: 17 SCGNPDAKRLYDDLLSNYNKLVRPVVNVSDAVTVKLKLKLSQLIDVNLRNQIMTTNLWVEQFWYDYKMRWEPDEYGGVDMLHVPSDHIWRPDIVLYNNADGNFEVTLSTKATLFNTGLVVWRPPAIYHSSCEMDVEYFPFDEQTCVMKFGSWTYDGF 173
BLAST of acetylcholine receptor subunit alpha-like vs. L. salmonis genes
Match: EMLSAG00000006919 (supercontig:LSalAtl2s:LSalAtl2s391:531733:535693:-1 gene:EMLSAG00000006919 transcript:EMLSAT00000006919 description:"snap_masked-LSalAtl2s391-processed-gene-5.26") HSP 1 Score: 226.098 bits (575), Expect = 6.974e-73 Identity = 115/179 (64.25%), Postives = 128/179 (71.51%), Query Frame = 0 Query: 89 LIILVSFCFPTVV---HGRTLLNAGNPDAKRLYDDLLSNYNKLVRPVVNTTDPLTVRIKLKLSQLIDV---------------FWFDYKLVWDPSEYGGVQQLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLSYNGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGF 249 LII+ F VV H R GNP AKRLYDDLLSNYN+L+RPV N T+ LTVR+ LKLSQLIDV W DYKL W P EYGGV+ L+VPS HIW PDIVL+NNADG +EVTL TKA L Y G V WKPPAIYKSSC+I+VE+FPFDEQ+C MKFGSWTYDGF Sbjct: 3 LIIIYKVLFVIVVFTEHAR----GGNPHAKRLYDDLLSNYNRLIRPVSNNTEKLTVRLGLKLSQLIDVDLKNQVMTTNVWVEQKWLDYKLNWKPEEYGGVEMLYVPSQHIWLPDIVLFNNADGKYEVTLMTKARLKYTGEVVWKPPAIYKSSCKINVEWFPFDEQSCDMKFGSWTYDGF 177
BLAST of acetylcholine receptor subunit alpha-like vs. L. salmonis genes
Match: EMLSAG00000009264 (supercontig:LSalAtl2s:LSalAtl2s58:470357:532297:1 gene:EMLSAG00000009264 transcript:EMLSAT00000009264 description:"maker-LSalAtl2s58-snap-gene-5.5") HSP 1 Score: 216.468 bits (550), Expect = 1.271e-67 Identity = 107/181 (59.12%), Postives = 127/181 (70.17%), Query Frame = 0 Query: 84 MVQWSLIILVSFCFPTVVHGRTLLNAGNPDAKRLYDDLLSNYNKLVRPVVNTTDPLTVRIKLKLSQLIDV---------------FWFDYKLVWDPSEYGGVQQLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLSYNGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGF 249 M W+ + V F TV NPDAKRLYDDLLSNY++L+RPV N++D LTV++ LKLSQ+I + W DYKL W P +YGGV+ LHVPS +IW PDIVLYNNADGN+EVT+ TKA L ++G V W PPAIYKSSCEIDVE+FPFDEQ C MKFGSWTYDG+ Sbjct: 1 MDTWTHSLCVLFFIGTVYFSSV---CANPDAKRLYDDLLSNYDRLIRPVGNSSDRLTVKMGLKLSQIIGIDMKRQIMITNVWVAQEWHDYKLKWKPEDYGGVKHLHVPSQNIWLPDIVLYNNADGNYEVTIMTKAVLHFSGRVVWNPPAIYKSSCEIDVEFFPFDEQKCFMKFGSWTYDGY 178
BLAST of acetylcholine receptor subunit alpha-like vs. L. salmonis genes
Match: EMLSAG00000002955 (supercontig:LSalAtl2s:LSalAtl2s16:183923:308993:1 gene:EMLSAG00000002955 transcript:EMLSAT00000002955 description:"maker-LSalAtl2s16-augustus-gene-3.5") HSP 1 Score: 198.364 bits (503), Expect = 1.831e-63 Identity = 110/184 (59.78%), Postives = 128/184 (69.57%), Query Frame = 0 Query: 83 SMVQ-WSLIILVSFCFPTVVHGRTLLNAGNPDAKRLYDDLLSNYNKLVRPVVNTTDPLTVRIKLKLSQLIDV---------------FWFDYKLVWDPSEYGGVQQLHVPSDHIWRPDIVLY-NNADGNFEVTLATKATLSYNGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGF 249 SM Q +SL I V C T + AGNPDAKRLYDDLLSNYNKLV PVVN ++ +TVR+KLKLSQLIDV +W+DYKL WDP+E +H++ + L+ +ADGNFEVTLATKATL +G VEWKPPAIY SSCE+DVEYFPFDEQTCVMKFGSWTYDG+ Sbjct: 5 SMSQTFSLTIFVLIC--------TSVRAGNPDAKRLYDDLLSNYNKLVXPVVNVSEAVTVRLKLKLSQLIDVNLKNQIMTTNLWVEQYWYDYKLQWDPTE-----------NHVY--NFYLFPRSADGNFEVTLATKATLMASGKVEWKPPAIYHSSCEMDVEYFPFDEQTCVMKFGSWTYDGY 167
BLAST of acetylcholine receptor subunit alpha-like vs. L. salmonis genes
Match: EMLSAG00000000084 (supercontig:LSalAtl2s:LSalAtl2s1011:37280:47532:-1 gene:EMLSAG00000000084 transcript:EMLSAT00000000084 description:"augustus_masked-LSalAtl2s1011-processed-gene-0.0") HSP 1 Score: 159.458 bits (402), Expect = 2.621e-47 Identity = 67/95 (70.53%), Postives = 81/95 (85.26%), Query Frame = 0 Query: 155 WFDYKLVWDPSEYGGVQQLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLSYNGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGF 249 W DYK WDPSEYGGV +++VPS+HIW PDI+LYNNADG++ VT TKA L Y+G V W PPAI+KSSCEIDVE+FPFD+QTC +KFGSW++DGF Sbjct: 11 WKDYKFTWDPSEYGGVTEIYVPSEHIWLPDIILYNNADGDYIVTTMTKAILHYDGKVVWTPPAIFKSSCEIDVEFFPFDKQTCFLKFGSWSFDGF 105
BLAST of acetylcholine receptor subunit alpha-like vs. L. salmonis genes
Match: EMLSAG00000007263 (supercontig:LSalAtl2s:LSalAtl2s408:502144:561240:1 gene:EMLSAG00000007263 transcript:EMLSAT00000007263 description:"maker-LSalAtl2s408-augustus-gene-5.30") HSP 1 Score: 163.31 bits (412), Expect = 1.030e-46 Identity = 82/175 (46.86%), Postives = 106/175 (60.57%), Query Frame = 0 Query: 89 LIILVSFCFPTVVHGRTLLNAGNPDAKRLYDDLLSNYNKLVRPVVNTTDPLTVRIKLKLSQLIDV---------------FWFDYKLVWDPSEYGGVQQLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLSYNGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDG 248 LIIL++F G G+ + +RL DL YNKL+RPV N T + V L QLI+V W DY+L WD ++YGG+ L +P D +W+PDIVL+NNADGN+EV + + +G V W PPAIY+SSC IDV YFPFD+QTC+MKFGSWT+ G Sbjct: 7 LIILLTFLLRLFSPGH-----GSQEEERLVRDLFRGYNKLIRPVQNMTQKVEVAFGLAFIQLINVNEKNQIMKSNVWLRFVWNDYQLQWDEADYGGISVLRLPPDKVWKPDIVLFNNADGNYEVRYKSNVLIYPDGEVLWVPPAIYQSSCTIDVTYFPFDQQTCIMKFGSWTFTG 176
BLAST of acetylcholine receptor subunit alpha-like vs. L. salmonis genes
Match: EMLSAG00000006524 (supercontig:LSalAtl2s:LSalAtl2s357:373959:378480:-1 gene:EMLSAG00000006524 transcript:EMLSAT00000006524 description:"augustus_masked-LSalAtl2s357-processed-gene-3.1") HSP 1 Score: 97.8265 bits (242), Expect = 1.596e-23 Identity = 55/145 (37.93%), Postives = 78/145 (53.79%), Query Frame = 0 Query: 116 RLYDDLLSNYNKLVRPVVNTTDPLTVRIKLKLSQL--------IDV------FWFDYKLVWDPSEYGGVQQLHVPSDHIWRPDIVLYNNAD-GNFEVTLATKATLSYNGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWT 245 RL + LL Y+K V PV N +D + V + + L L +DV W D L WDPS+Y + ++H D IW+PDI+ YNNA+ + T + + G V W PP K+ C +D++ +P D QTC +KFGSWT Sbjct: 265 RLRNVLLEKYDKEVHPVSNHSDTVVVSVGMSLIHLDINELKSTMDVDAWMRFTWIDEYLSWDPSDYENLTKIHFSEDEIWQPDILPYNNANPESLNPYHKTSFLVHHTGDVLWVPPVHLKAFCRLDLKMWPLDTQTCSLKFGSWT 409
BLAST of acetylcholine receptor subunit alpha-like vs. L. salmonis genes
Match: EMLSAG00000001191 (supercontig:LSalAtl2s:LSalAtl2s119:41853:66097:-1 gene:EMLSAG00000001191 transcript:EMLSAT00000001191 description:"augustus_masked-LSalAtl2s119-processed-gene-0.1") HSP 1 Score: 69.707 bits (169), Expect = 1.664e-15 Identity = 40/108 (37.04%), Postives = 55/108 (50.93%), Query Frame = 0 Query: 116 RLYDDLLSNYNKLVRPVVNTTDPLTVRIKLKLSQLIDV---------------FWFDYKLVWDPSEYGGVQQLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLSYN 208 RL LLSNY V PV N++ PL V + + L +IDV W D L W+ S++GG++ + +P D +WRPDI+LYN E+ L T L N Sbjct: 16 RLTKYLLSNYEPSVLPVENSSTPLDVSLGVSLHHIIDVDEKNQIITTNCWITQTWRDTHLTWNASDFGGIRTIRLPFDRVWRPDIILYNKL--KLEIKLKTGTGLDKN 121
BLAST of acetylcholine receptor subunit alpha-like vs. L. salmonis genes
Match: EMLSAG00000003136 (supercontig:LSalAtl2s:LSalAtl2s175:296544:305979:-1 gene:EMLSAG00000003136 transcript:EMLSAT00000003136 description:"maker-LSalAtl2s175-snap-gene-3.18") HSP 1 Score: 72.4034 bits (176), Expect = 4.025e-15 Identity = 44/156 (28.21%), Postives = 74/156 (47.44%), Query Frame = 0 Query: 98 PTVVHGRTLLNAGNPDAKRLYDDLLSNYNKLVRPVVNTTDPLTVRIKLKLSQLIDV---------------FWFDYKLVWDPSEYGGVQQLHVPSDH--------------IWRPDIVLYNNADGNFEVTLATKATLSYNGLVEWKPPAIYKSSCE 224 PTV G+T K++ + + +NYN L RPV + +P+ + + + L ++I + W D+ L W+ SEY +++L +P++H +W PDI+LYN+A F LS G + + PP I +S+CE Sbjct: 15 PTVFGGQT--------EKKVLNFVFNNYNILERPVRDPKEPVQLSMGVSLRRIIGLDEKNQILTANLWITLIWKDHNLHWNRSEYPKIERLQIPTEHSIPKLERLQIPTEHVWTPDILLYNSASTAFNNFYHVNLLLSNEGEIRYMPPGIIQSTCE 162
BLAST of acetylcholine receptor subunit alpha-like vs. SwissProt
Match: gi|584718|sp|Q07263.1|ACHA3_BOVIN (RecName: Full=Neuronal acetylcholine receptor subunit alpha-3; Flags: Precursor) HSP 1 Score: 168.318 bits (425), Expect = 5.106e-48 Identity = 78/155 (50.32%), Postives = 105/155 (67.74%), Query Frame = 0 Query: 109 AGNPDAK-RLYDDLLSNYNKLVRPVVNTTDPLTVRIKLKLSQLIDV---------------FWFDYKLVWDPSEYGGVQQLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLSYNGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYD 247 A DA+ RL++ L +YN+++RPV N +DP+ ++ ++ +SQL+ V W DYKL W+PS+Y G + + VP++ IW+PDIVLYNNA G+F+V TKA L Y G V W PPAI+KSSC+IDV YFPFD Q C MKFGSW+YD Sbjct: 19 ASTSDAEHRLFERLFEDYNEIIRPVANVSDPVIIQFEVSMSQLVKVDEVNQIMETNLWLKQIWNDYKLKWNPSDYDGAEFMRVPAEKIWKPDIVLYNNAVGDFQVDDKTKALLKYTGEVTWIPPAIFKSSCKIDVTYFPFDYQNCTMKFGSWSYD 173
BLAST of acetylcholine receptor subunit alpha-like vs. SwissProt
Match: gi|113109|sp|P18257.1|ACHN3_CARAU (RecName: Full=Neuronal acetylcholine receptor subunit non-alpha-3; AltName: Full=GFN-alpha-3; Flags: Precursor) HSP 1 Score: 167.162 bits (422), Expect = 8.550e-48 Identity = 78/147 (53.06%), Postives = 96/147 (65.31%), Query Frame = 0 Query: 117 LYDDLLSNYNKLVRPVVNTTDPLTVRIKLKLSQLIDV---------------FWFDYKLVWDPSEYGGVQQLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLSYNGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDG 248 L +L Y K VRP+++ D +TVR LK+SQL+DV W DYKL W+P +YGG+ + VPS+ IW PDIVLY NADG FE +L TKA + +NG + W PPA YKSSC +DV +FPFD Q C MKFGSWTYDG Sbjct: 35 LLRNLFRGYQKWVRPILHANDTITVRFGLKISQLVDVDEKNHLMTTNVWLWQEWTDYKLRWNPEDYGGITSIRVPSETIWLPDIVLYENADGRFEGSLMTKAIVRFNGTIMWTPPASYKSSCTMDVTFFPFDRQNCSMKFGSWTYDG 181
BLAST of acetylcholine receptor subunit alpha-like vs. SwissProt
Match: gi|113060|sp|P04755.1|ACH3_DROME (RecName: Full=Acetylcholine receptor subunit beta-like 1; AltName: Full=Nicotinic acetylcholine receptor beta 1; Flags: Precursor) HSP 1 Score: 168.318 bits (425), Expect = 9.062e-48 Identity = 82/176 (46.59%), Postives = 109/176 (61.93%), Query Frame = 0 Query: 88 SLIILVSFCFPTVVHGRTLLNAGNPDAKRLYDDLLSNYNKLVRPVVNTTDPLTVRIKLKLSQLIDV---------------FWFDYKLVWDPSEYGGVQQLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLSYNGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDG 248 S+++LV+F L + + D +RL DL YNKL+RPV N T + VR L QLI+V W+DY+L WD ++YGG+ L +P D +W+PDIVL+NNADGN+EV + + G V W PPAIY+SSC IDV YFPFD+QTC+MKFGSWT++G Sbjct: 12 SILVLVAFS----------LVSASEDEERLVRDLFRGYNKLIRPVQNMTQKVGVRFGLAFVQLINVNEKNQVMKSNVWLRLVWYDYQLQWDEADYGGIGVLRLPPDKVWKPDIVLFNNADGNYEVRYKSNVLIYPTGEVLWVPPAIYQSSCTIDVTYFPFDQQTCIMKFGSWTFNG 177
BLAST of acetylcholine receptor subunit alpha-like vs. SwissProt
Match: gi|122142601|sp|Q19AE6.1|ACHA4_MUSPF (RecName: Full=Neuronal acetylcholine receptor subunit alpha-4; Flags: Precursor) HSP 1 Score: 169.088 bits (427), Expect = 1.649e-47 Identity = 81/148 (54.73%), Postives = 99/148 (66.89%), Query Frame = 0 Query: 115 KRLYDDLLSNYNKLVRPVVNTTDPLTVRIKLKLSQLIDV---------------FWFDYKLVWDPSEYGGVQQLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLSYNGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYD 247 +RL L S YNK RPV N +D + V L ++QLIDV W+DYKL WDP++Y V + +PS+ IWRPDIVLYNNADG+F +T TKA L ++G V+W PPAIYKSSC IDV +FPFD+Q C MKFGSWTYD Sbjct: 40 ERLLKTLFSGYNKWSRPVANISDVVLVHFGLSIAQLIDVDEKNQMMTTNVWVKQEWYDYKLRWDPADYENVTSIRIPSELIWRPDIVLYNNADGDFAITHLTKAHLFHDGRVQWTPPAIYKSSCSIDVTFFPFDQQNCTMKFGSWTYD 187
BLAST of acetylcholine receptor subunit alpha-like vs. SwissProt
Match: gi|62901487|sp|Q8R4G9.1|ACHA3_MOUSE (RecName: Full=Neuronal acetylcholine receptor subunit alpha-3; Flags: Precursor) HSP 1 Score: 166.777 bits (421), Expect = 2.344e-47 Identity = 76/147 (51.70%), Postives = 100/147 (68.03%), Query Frame = 0 Query: 116 RLYDDLLSNYNKLVRPVVNTTDPLTVRIKLKLSQLIDV---------------FWFDYKLVWDPSEYGGVQQLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLSYNGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYD 247 RL+ L +YN+++RPV N + P+ ++ ++ +SQL+ V W DYKL W PS+Y GV+ + VP++ IW+PDIVLYNNADG+F+V TKA L Y G V W PPAI+KSSC+IDV YFPFD Q C MKFGSW+YD Sbjct: 31 RLFQYLFEDYNEIIRPVANVSHPVIIQFEVSMSQLVKVDEVNQIMETNLWLKQIWNDYKLKWKPSDYQGVEFMRVPAEKIWKPDIVLYNNADGDFQVDDKTKALLKYTGEVTWIPPAIFKSSCKIDVTYFPFDYQNCTMKFGSWSYD 177
BLAST of acetylcholine receptor subunit alpha-like vs. nr
Match: gi|914576187|gb|KOB78101.1| (Nicotinic acetylcholine receptor subunit alpha 3 [Operophtera brumata]) HSP 1 Score: 273.092 bits (697), Expect = 1.165e-87 Identity = 126/141 (89.36%), Postives = 133/141 (94.33%), Query Frame = 0 Query: 109 AGNPDAKRLYDDLLSNYNKLVRPVVNTTDPLTVRIKLKLSQLIDVFWFDYKLVWDPSEYGGVQQLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLSYNGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGF 249 AGNPDAKRLYDDLLSNYNKLVRPV+N +D LTVRIKLKLSQLIDV WFDYKL W+P EYGGV+ LHVPSDHIWRPDIVLYNNADGNFEVTLATKATL+Y G VEW+PPAIYKSSCEIDVEYFPFD+QTCVMKFGSWTYDGF Sbjct: 16 AGNPDAKRLYDDLLSNYNKLVRPVLNVSDALTVRIKLKLSQLIDVSWFDYKLSWEPREYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEWRPPAIYKSSCEIDVEYFPFDQQTCVMKFGSWTYDGF 156
BLAST of acetylcholine receptor subunit alpha-like vs. nr
Match: gi|1059233460|ref|XP_017761788.1| (PREDICTED: acetylcholine receptor subunit alpha-like isoform X2 [Eufriesea mexicana]) HSP 1 Score: 269.24 bits (687), Expect = 3.219e-87 Identity = 132/180 (73.33%), Postives = 142/180 (78.89%), Query Frame = 0 Query: 85 VQWSLIILVSFCFPTVVHGRTLLNAGNPDAKRLYDDLLSNYNKLVRPVVNTTDPLTVRIKLKLSQLIDV---------------FWFDYKLVWDPSEYGGVQQLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLSYNGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGF 249 + W +++L+S C +GNPDAKRLYDDLLSNYNKLVRPVVN TD LTV+IKLKLSQLIDV W+DYKL WDP EYGGV+ LHVPSDHIWRPDIVLYNNADGNFEVTLATKATL+Y G VEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGF Sbjct: 7 IMWIVLVLISGC------------SGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGF 174
BLAST of acetylcholine receptor subunit alpha-like vs. nr
Match: gi|861659896|gb|KMR04748.1| (acetylcholine receptor subunit alpha-like protein [Lasius niger]) HSP 1 Score: 277.33 bits (708), Expect = 3.493e-87 Identity = 128/141 (90.78%), Postives = 133/141 (94.33%), Query Frame = 0 Query: 109 AGNPDAKRLYDDLLSNYNKLVRPVVNTTDPLTVRIKLKLSQLIDVFWFDYKLVWDPSEYGGVQQLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLSYNGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGF 249 +GNPDAKRLYDDLLSNYNKLVRPVVN TD LTV+IKLKLSQLIDV W+DYKL WDP EYGGV+ LHVPSDHIWRPDIVLYNNADGNFEVTLATKATL+Y G VEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGF Sbjct: 8 SGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGF 148
BLAST of acetylcholine receptor subunit alpha-like vs. nr
Match: gi|1035609147|ref|XP_016912167.1| (PREDICTED: acetylcholine receptor subunit alpha-like isoform X5 [Apis cerana]) HSP 1 Score: 268.855 bits (686), Expect = 4.182e-87 Identity = 132/180 (73.33%), Postives = 142/180 (78.89%), Query Frame = 0 Query: 85 VQWSLIILVSFCFPTVVHGRTLLNAGNPDAKRLYDDLLSNYNKLVRPVVNTTDPLTVRIKLKLSQLIDV---------------FWFDYKLVWDPSEYGGVQQLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLSYNGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGF 249 + W +++L+S C +GNPDAKRLYDDLLSNYNKLVRPVVN TD LTV+IKLKLSQLIDV W+DYKL WDP EYGGV+ LHVPSDHIWRPDIVLYNNADGNFEVTLATKATL+Y G VEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGF Sbjct: 8 IMWIVLVLISGC------------SGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGF 175
BLAST of acetylcholine receptor subunit alpha-like vs. nr
Match: gi|380025240|ref|XP_003696385.1| (PREDICTED: acetylcholine receptor subunit alpha-like [Apis florea]) HSP 1 Score: 268.855 bits (686), Expect = 8.649e-87 Identity = 132/180 (73.33%), Postives = 142/180 (78.89%), Query Frame = 0 Query: 85 VQWSLIILVSFCFPTVVHGRTLLNAGNPDAKRLYDDLLSNYNKLVRPVVNTTDPLTVRIKLKLSQLIDV---------------FWFDYKLVWDPSEYGGVQQLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLSYNGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGF 249 + W +++L+S C +GNPDAKRLYDDLLSNYNKLVRPVVN TD LTV+IKLKLSQLIDV W+DYKL WDP EYGGV+ LHVPSDHIWRPDIVLYNNADGNFEVTLATKATL+Y G VEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGF Sbjct: 8 IMWIVLVLISGC------------SGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGF 175
BLAST of acetylcholine receptor subunit alpha-like vs. nr
Match: gi|1000214920|gb|KXJ84147.1| (hypothetical protein RP20_CCG017211 [Aedes albopictus]) HSP 1 Score: 264.618 bits (675), Expect = 1.437e-86 Identity = 128/159 (80.50%), Postives = 135/159 (84.91%), Query Frame = 0 Query: 106 LLNAGNPDAKRLYDDLLSNYNKLVRPVVNTTDPLTVRIKLKLSQLIDV---------------FWFDYKLVWDPSEYGGVQQLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLSYNGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGF 249 L+ AGNPDAKRLYDDLLSNYNKLVRPVVN TD LTV+IKLKLSQLIDV W+DYKL W+P EYGGV+ LHVPSDHIWRPDIVLYNNADGNFEVTLATKATL+Y G VEW+PPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGF Sbjct: 9 LVCAGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLWVEQTWYDYKLKWEPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEWRPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGF 167
BLAST of acetylcholine receptor subunit alpha-like vs. nr
Match: gi|805804601|ref|XP_012145544.1| (PREDICTED: acetylcholine receptor subunit alpha-like isoform X3 [Megachile rotundata]) HSP 1 Score: 271.166 bits (692), Expect = 4.407e-86 Identity = 132/180 (73.33%), Postives = 142/180 (78.89%), Query Frame = 0 Query: 85 VQWSLIILVSFCFPTVVHGRTLLNAGNPDAKRLYDDLLSNYNKLVRPVVNTTDPLTVRIKLKLSQLIDV---------------FWFDYKLVWDPSEYGGVQQLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLSYNGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGF 249 + W +++L+S C +GNPDAKRLYDDLLSNYNKLVRPVVN TD LTV+IKLKLSQLIDV W+DYKL WDP EYGGV+ LHVPSDHIWRPDIVLYNNADGNFEVTLATKATL+Y G VEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGF Sbjct: 8 IMWIVLVLISGC------------SGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGF 175
BLAST of acetylcholine receptor subunit alpha-like vs. nr
Match: gi|1236461579|ref|XP_022234254.1| (acetylcholine receptor subunit alpha-like, partial [Drosophila obscura]) HSP 1 Score: 261.922 bits (668), Expect = 7.977e-86 Identity = 126/157 (80.25%), Postives = 132/157 (84.08%), Query Frame = 0 Query: 108 NAGNPDAKRLYDDLLSNYNKLVRPVVNTTDPLTVRIKLKLSQLIDV---------------FWFDYKLVWDPSEYGGVQQLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLSYNGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGF 249 + NPDAKRLYDDLLSNYNKLVRPVVN TD LTVRIKLKLSQLIDV W+DYKL W+P EYGGV+ LHVPSDHIWRPDIVLYNNADGNFEVTLATKATL+Y G VEW+PPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGF Sbjct: 20 STANPDAKRLYDDLLSNYNKLVRPVVNVTDALTVRIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLKWEPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEWRPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGF 176
BLAST of acetylcholine receptor subunit alpha-like vs. nr
Match: gi|1233158566|ref|XP_022186995.1| (acetylcholine receptor subunit alpha-like [Nilaparvata lugens]) HSP 1 Score: 267.314 bits (682), Expect = 9.827e-86 Identity = 132/165 (80.00%), Postives = 136/165 (82.42%), Query Frame = 0 Query: 100 VVHGRTLLNAGNPDAKRLYDDLLSNYNKLVRPVVNTTDPLTVRIKLKLSQLIDV---------------FWFDYKLVWDPSEYGGVQQLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLSYNGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGF 249 VVHG AGNPDAKRLYDDLLSNYNKLVRPVVNTTD L V IKLKLSQLIDV W+DYKL W+P EYGGVQ LHVPSDHIWRPDIVLYNNADGNFEVTLATKAT+ Y GLVEWKPPAIYKSSCEIDVEYFPFDEQTCV+KFGSWTYDGF Sbjct: 28 VVHGAV---AGNPDAKRLYDDLLSNYNKLVRPVVNTTDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLRWEPKEYGGVQMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYYQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFGSWTYDGF 189
BLAST of acetylcholine receptor subunit alpha-like vs. nr
Match: gi|170059933|ref|XP_001865578.1| (acetylcholine receptor protein alpha 1, 2, 3, 4 [Culex quinquefasciatus] >gi|167878523|gb|EDS41906.1| acetylcholine receptor protein alpha 1, 2, 3, 4 [Culex quinquefasciatus]) HSP 1 Score: 263.462 bits (672), Expect = 1.072e-85 Identity = 127/156 (81.41%), Postives = 133/156 (85.26%), Query Frame = 0 Query: 109 AGNPDAKRLYDDLLSNYNKLVRPVVNTTDPLTVRIKLKLSQLIDV---------------FWFDYKLVWDPSEYGGVQQLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLSYNGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGF 249 AGNPDAKRLYDDLLSNYNKLVRPVVN TD LTV+IKLKLSQLIDV W+DYKL W+P EYGGV+ LHVPSDHIWRPDIVLYNNADGNFEVTLATKATL+Y G VEW+PPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGF Sbjct: 49 AGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLWVEQTWYDYKLKWEPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEWRPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGF 204 The following BLAST results are available for this feature:
BLAST of acetylcholine receptor subunit alpha-like vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 16
Pagesback to top
BLAST of acetylcholine receptor subunit alpha-like vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
Pagesback to top
BLAST of acetylcholine receptor subunit alpha-like vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold47_size466558:384601..386338+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold47_size466558-snap-gene-3.40 ID=maker-scaffold47_size466558-snap-gene-3.40|Name=acetylcholine receptor subunit alpha-like|organism=Tigriopus kingsejongensis|type=gene|length=1738bp|location=Sequence derived from alignment at scaffold47_size466558:384601..386338+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'acetylcholine receptor subunit alpha-like' has the following synonyms
Add to Basket
|