cytochrome b5-like, maker-scaffold488_size158317-snap-gene-0.23 (gene) Tigriopus kingsejongensis

Overview
Namecytochrome b5-like
Unique Namemaker-scaffold488_size158317-snap-gene-0.23
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
BLAST of cytochrome b5-like vs. L. salmonis genes
Match: EMLSAG00000012951 (supercontig:LSalAtl2s:LSalAtl2s98:1088244:1088871:-1 gene:EMLSAG00000012951 transcript:EMLSAT00000012951 description:"snap_masked-LSalAtl2s98-processed-gene-10.6")

HSP 1 Score: 72.4034 bits (176), Expect = 3.985e-16
Identity = 39/83 (46.99%), Postives = 56/83 (67.47%), Query Frame = 0
Query:  194 IIYLCEVREHD--SMDDG--WMILYDKVYDVTNFINEHPGGAFVMMEYLGRDATSAF--AGHSRDAVEMLDDLVLGILPKTER 270
            I  L EV++H+  S D    W I+ ++VYDV+NF++EHPGG  V++E  G D+T AF   GHS DA EM+ D ++G L +T+R
Sbjct:    4 IYTLEEVKKHNGSSKDSNSVWTIIDNQVYDVSNFLDEHPGGEEVLIENGGMDSTEAFEDVGHSSDAREMMKDYLIGELSETDR 86          
BLAST of cytochrome b5-like vs. SwissProt
Match: gi|1345880|sp|P49096.1|CYB5_MUSDO (RecName: Full=Cytochrome b5; Short=CYTB5)

HSP 1 Score: 81.2629 bits (199), Expect = 4.796e-18
Identity = 41/86 (47.67%), Postives = 56/86 (65.12%), Query Frame = 0
Query:  198 CEVREHDSMDDGWMILYDKVYDVTNFINEHPGGAFVMMEYLGRDATSAF--AGHSRDAVEMLDDLVLGILPKTERSNV--YSKPTF 279
             EV ++++ D  W I+++ VYDVT F+NEHPGG  V++E  G+DAT  F   GHS DA EM+    +G L   ERSNV   S+PT+
Sbjct:   12 AEVAKNNTKDKNWFIIHNNVYDVTAFLNEHPGGEEVLIEQAGKDATEHFEDVGHSSDAREMMKQYKVGELVAEERSNVPEKSEPTW 97          
BLAST of cytochrome b5-like vs. SwissProt
Match: gi|20138075|sp|Q9V4N3.1|CYB5_DROME (RecName: Full=Cytochrome b5; Short=CYTB5)

HSP 1 Score: 80.4925 bits (197), Expect = 1.219e-17
Identity = 37/86 (43.02%), Postives = 58/86 (67.44%), Query Frame = 0
Query:  198 CEVREHDSMDDGWMILYDKVYDVTNFINEHPGGAFVMMEYLGRDATSAF--AGHSRDAVEMLDDLVLGILPKTERSNVYSK--PTF 279
             EV +H++  D W+++++ +YDVT F+NEHPGG  V++E  G+DAT  F   GHS DA +M+    +G L ++ER++V  K  PT+
Sbjct:   12 AEVAKHNTNKDTWLLIHNNIYDVTAFLNEHPGGEEVLIEQAGKDATENFEDVGHSNDARDMMKKYKIGELVESERTSVAQKSEPTW 97          
BLAST of cytochrome b5-like vs. SwissProt
Match: gi|20137975|sp|Q9HFV1.1|CYB5_RHIST (RecName: Full=Cytochrome b5)

HSP 1 Score: 76.2554 bits (186), Expect = 3.715e-16
Identity = 36/84 (42.86%), Postives = 57/84 (67.86%), Query Frame = 0
Query:  194 IIYLCEVREHDSMDDGWMILYDKVYDVTNFINEHPGGAFVMMEYLGRDATSAFA--GHSRDAVEMLDDLVLGILPKTERSNVYS 275
            I  L EV +H +  D W+++++KVYD+T F+ EHPGG  V+++  G+DAT AF   GHS +A EML++ ++G L +  R+  Y+
Sbjct:    5 IFSLDEVSKHKTKSDLWVVIHNKVYDITRFVVEHPGGEEVLVDEGGKDATEAFEDIGHSDEAREMLEEYLIGSLDEASRTKEYN 88          
BLAST of cytochrome b5-like vs. SwissProt
Match: gi|6166051|sp|P00172.3|CYB5_PIG (RecName: Full=Cytochrome b5)

HSP 1 Score: 72.4034 bits (176), Expect = 1.091e-14
Identity = 38/95 (40.00%), Postives = 59/95 (62.11%), Query Frame = 0
Query:  188 EETNLPIIY--LCEVREHDSMDDGWMILYDKVYDVTNFINEHPGGAFVMMEYLGRDATSAF--AGHSRDAVEMLDDLVLGILPKTERSNVYSKPT 278
            E+++  + Y  L E+++H++    W+IL+ KVYD+T F+ EHPGG  V+ E  G DAT  F   GHS DA E+    ++G L   +RS + +KP+
Sbjct:    3 EQSDKAVKYYTLEEIQKHNNSKSTWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTDARELSKTFIIGELHPDDRSKI-AKPS 96          
BLAST of cytochrome b5-like vs. SwissProt
Match: gi|117806|sp|P00171.3|CYB5_BOVIN (RecName: Full=Cytochrome b5)

HSP 1 Score: 72.0182 bits (175), Expect = 1.467e-14
Identity = 39/95 (41.05%), Postives = 59/95 (62.11%), Query Frame = 0
Query:  188 EETNLPIIY--LCEVREHDSMDDGWMILYDKVYDVTNFINEHPGGAFVMMEYLGRDATSAF--AGHSRDAVEMLDDLVLGILPKTERSNVYSKPT 278
            EE++  + Y  L E+++H++    W+IL+ KVYD+T F+ EHPGG  V+ E  G DAT  F   GHS DA E+    ++G L   +RS + +KP+
Sbjct:    3 EESSKAVKYYTLEEIQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTDARELSKTFIIGELHPDDRSKI-TKPS 96          
BLAST of cytochrome b5-like vs. SwissProt
Match: gi|20138039|sp|Q9P5L0.2|CYB5_NEUCR (RecName: Full=Probable cytochrome b5)

HSP 1 Score: 72.0182 bits (175), Expect = 1.830e-14
Identity = 31/71 (43.66%), Postives = 52/71 (73.24%), Query Frame = 0
Query:  199 EVREHDSMDDGWMILYDKVYDVTNFINEHPGGAFVMMEYLGRDATSAF--AGHSRDAVEMLDDLVLGILPK 267
            +V EH++  D +++++DKVYD+T F++EHPGG  V+++  G+D+T AF   GHS +A E L+ L++G L +
Sbjct:    9 DVAEHNTKKDLYVVIHDKVYDITKFVDEHPGGEEVLLDVAGQDSTEAFEDVGHSDEAREALEPLLVGTLKR 79          
BLAST of cytochrome b5-like vs. SwissProt
Match: gi|67476945|sp|O43169.2|CYB5B_HUMAN (RecName: Full=Cytochrome b5 type B; AltName: Full=Cytochrome b5 outer mitochondrial membrane isoform; Flags: Precursor)

HSP 1 Score: 71.633 bits (174), Expect = 2.864e-14
Identity = 34/77 (44.16%), Postives = 51/77 (66.23%), Query Frame = 0
Query:  189 ETNLPIIYLCEVREHDSMDDGWMILYDKVYDVTNFINEHPGGAFVMMEYLGRDATSAF--AGHSRDAVEMLDDLVLG 263
            ET++    L EV + +S+ + W++++ +VYDVT F+NEHPGG  V++E  G DA+ +F   GHS DA EML    +G
Sbjct:   17 ETSVTYYRLEEVAKRNSLKELWLVIHGRVYDVTRFLNEHPGGEEVLLEQAGVDASESFEDVGHSSDAREMLKQYYIG 93          
BLAST of cytochrome b5-like vs. SwissProt
Match: gi|117811|sp|P00169.4|CYB5_RABIT (RecName: Full=Cytochrome b5)

HSP 1 Score: 70.8626 bits (172), Expect = 3.322e-14
Identity = 37/83 (44.58%), Postives = 51/83 (61.45%), Query Frame = 0
Query:  197 LCEVREHDSMDDGWMILYDKVYDVTNFINEHPGGAFVMMEYLGRDATSAF--AGHSRDAVEMLDDLVLGILPKTERSNVYSKP 277
            L E+++H+     W+IL+ KVYD+T F+ EHPGG  V+ E  G DAT  F   GHS DA E+    ++G L   +RS + SKP
Sbjct:   14 LEEIKKHNHSKSTWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTDARELSKTFIIGELHPDDRSKL-SKP 95          
BLAST of cytochrome b5-like vs. SwissProt
Match: gi|1706221|sp|P40312.2|CYB5_YEAST (RecName: Full=Cytochrome b5)

HSP 1 Score: 69.707 bits (169), Expect = 6.711e-14
Identity = 38/86 (44.19%), Postives = 58/86 (67.44%), Query Frame = 0
Query:  192 LPIIY-LCEVREHDSMDDGWMILYDKVYDVTNFINEHPGGAFVMMEYLGRDATSAFA--GHSRDAVEMLDDLVLGILPKT-ERSNV 273
            +P +Y   EV EH+  ++ W+I+ DKVYDV+ F +EHPGG  ++M+  G+DAT +F   GHS +A+ +L  L +G + KT ER +V
Sbjct:    1 MPKVYSYQEVAEHNGPENFWIIIDDKVYDVSQFKDEHPGGDEIIMDLGGQDATESFVDIGHSDEALRLLKGLYIGDVDKTSERVSV 86          
BLAST of cytochrome b5-like vs. SwissProt
Match: gi|62510585|sp|Q5RDJ5.2|CYB5B_PONAB (RecName: Full=Cytochrome b5 type B; AltName: Full=Cytochrome b5 outer mitochondrial membrane isoform; Flags: Precursor)

HSP 1 Score: 70.4774 bits (171), Expect = 6.735e-14
Identity = 33/77 (42.86%), Postives = 51/77 (66.23%), Query Frame = 0
Query:  189 ETNLPIIYLCEVREHDSMDDGWMILYDKVYDVTNFINEHPGGAFVMMEYLGRDATSAF--AGHSRDAVEMLDDLVLG 263
            ET++    + EV + +S+ + W++++ +VYDVT F+NEHPGG  V++E  G DA+ +F   GHS DA EML    +G
Sbjct:   17 ETSVTYYRMEEVAKRNSLKELWLVIHGRVYDVTRFLNEHPGGEEVLLEQAGVDASESFEDVGHSSDAREMLKQYYIG 93          
BLAST of cytochrome b5-like vs. nr
Match: gi|1199382715|ref|XP_021185944.1| (cytochrome b5-like [Helicoverpa armigera])

HSP 1 Score: 96.6709 bits (239), Expect = 4.661e-21
Identity = 46/97 (47.42%), Postives = 64/97 (65.98%), Query Frame = 0
Query:  183 IIPVDEETNLPIIYLCEVREHDSMDDGWMILYDKVYDVTNFINEHPGGAFVMMEYLGRDATSAF--AGHSRDAVEMLDDLVLGILPKTERSNVYSKP 277
            I+P   E     I L EVR HD+  D W+++YD+VYD+T F +EHPGGA +M EY G DA++AF  +GHSR A + L+  ++G LP  ER  +Y +P
Sbjct:   54 IVPGAPEAKDRTITLAEVRMHDTPQDCWVVIYDRVYDITTFFDEHPGGADIMFEYAGHDASTAFRSSGHSRMATKALERFLVGELPMQER--MYRRP 148          
BLAST of cytochrome b5-like vs. nr
Match: gi|1036899693|ref|XP_017117173.1| (PREDICTED: cytochrome b5 [Drosophila elegans])

HSP 1 Score: 95.9005 bits (237), Expect = 5.867e-21
Identity = 43/78 (55.13%), Postives = 60/78 (76.92%), Query Frame = 0
Query:  191 NLPIIYLCEVREHDSMDDGWMILYDKVYDVTNFINEHPGGAFVMMEYLGRDATSAF--AGHSRDAVEMLDDLVLGILP 266
            +LP I L EV +HDS DD W+++YD+VYDVT+F+ +HPGG  V+M++ GRDAT AF   GHS DA+E++ D ++G LP
Sbjct:   40 DLPEIALEEVAQHDSFDDCWVVIYDRVYDVTHFLRDHPGGDDVIMDHAGRDATIAFHGTGHSGDAIELMKDFLIGQLP 117          
BLAST of cytochrome b5-like vs. nr
Match: gi|914569912|gb|KOB73428.1| (Cytochrome b5 [Operophtera brumata])

HSP 1 Score: 95.9005 bits (237), Expect = 7.928e-21
Identity = 48/111 (43.24%), Postives = 72/111 (64.86%), Query Frame = 0
Query:  169 SPDSSATNLEGVQDIIPVDEETNLPIIYLCEVREHDSMDDGWMILYDKVYDVTNFINEHPGGAFVMMEYLGRDATSAF--AGHSRDAVEMLDDLVLGILPKTERSNVYSKP 277
            +P S  T  +    I+P   E     I L EV  HD+ +D W+++YD+VYD++ F++EHPGGA +M+EY GRDA++AF  +GHSR A + L+  ++G LP  ER  +Y +P
Sbjct:   39 NPWSVETKSQWSDRIVPGTPEAKDRTITLAEVAYHDTPNDCWVVIYDRVYDISTFLDEHPGGAEIMLEYAGRDASTAFRGSGHSRMASKALERFLVGELPMPER--MYRRP 147          
BLAST of cytochrome b5-like vs. nr
Match: gi|195436722|ref|XP_002066306.1| (cytochrome b5 [Drosophila willistoni] >gi|194162391|gb|EDW77292.1| uncharacterized protein Dwil_GK18221 [Drosophila willistoni])

HSP 1 Score: 95.5153 bits (236), Expect = 8.456e-21
Identity = 43/78 (55.13%), Postives = 56/78 (71.79%), Query Frame = 0
Query:  195 IYLCEVREHDSMDDGWMILYDKVYDVTNFINEHPGGAFVMMEYLGRDATSAF--AGHSRDAVEMLDDLVLGILPKTER 270
            I L EV  HDS DD W+++YD+VYDVT F+ EHPGG  V+M++ GRDAT AF   GHS DA+E + D ++G LP  +R
Sbjct:   46 ITLAEVAHHDSFDDCWIVVYDRVYDVTRFLREHPGGDDVIMDHAGRDATIAFHGTGHSSDAIEQMRDFLIGELPIEQR 123          
BLAST of cytochrome b5-like vs. nr
Match: gi|1321306306|ref|XP_023295137.1| (cytochrome b5 [Lucilia cuprina] >gi|906458265|gb|KNC21516.1| hypothetical protein FF38_09044 [Lucilia cuprina])

HSP 1 Score: 95.1301 bits (235), Expect = 8.742e-21
Identity = 43/85 (50.59%), Postives = 61/85 (71.76%), Query Frame = 0
Query:  188 EETNLPIIYLCEVREHDSMDDGWMILYDKVYDVTNFINEHPGGAFVMMEYLGRDATSAF--AGHSRDAVEMLDDLVLGILPKTER 270
            ++  LP I L  V +HD   D W+++YD+VYD+T+F+  HPGGA V+M+Y GRDAT AF   GHSRDA+E + D ++G LP+ E+
Sbjct:   35 QKAALPEISLDAVSQHDDYCDCWVVIYDRVYDLTSFLQNHPGGADVIMDYAGRDATLAFHGTGHSRDAIEQMRDYLIGELPEHEK 119          
The following BLAST results are available for this feature:
BLAST of cytochrome b5-like vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAG000000129513.985e-1646.99supercontig:LSalAtl2s:LSalAtl2s98:1088244:1088871:... [more]
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BLAST of cytochrome b5-like vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
gi|1345880|sp|P49096.1|CYB5_MUSDO4.796e-1847.67RecName: Full=Cytochrome b5; Short=CYTB5[more]
gi|20138075|sp|Q9V4N3.1|CYB5_DROME1.219e-1743.02RecName: Full=Cytochrome b5; Short=CYTB5[more]
gi|20137975|sp|Q9HFV1.1|CYB5_RHIST3.715e-1642.86RecName: Full=Cytochrome b5[more]
gi|6166051|sp|P00172.3|CYB5_PIG1.091e-1440.00RecName: Full=Cytochrome b5[more]
gi|117806|sp|P00171.3|CYB5_BOVIN1.467e-1441.05RecName: Full=Cytochrome b5[more]
gi|20138039|sp|Q9P5L0.2|CYB5_NEUCR1.830e-1443.66RecName: Full=Probable cytochrome b5[more]
gi|67476945|sp|O43169.2|CYB5B_HUMAN2.864e-1444.16RecName: Full=Cytochrome b5 type B; AltName: Full=... [more]
gi|117811|sp|P00169.4|CYB5_RABIT3.322e-1444.58RecName: Full=Cytochrome b5[more]
gi|1706221|sp|P40312.2|CYB5_YEAST6.711e-1444.19RecName: Full=Cytochrome b5[more]
gi|62510585|sp|Q5RDJ5.2|CYB5B_PONAB6.735e-1442.86RecName: Full=Cytochrome b5 type B; AltName: Full=... [more]

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BLAST of cytochrome b5-like vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|1199382715|ref|XP_021185944.1|4.661e-2147.42cytochrome b5-like [Helicoverpa armigera][more]
gi|1036899693|ref|XP_017117173.1|5.867e-2155.13PREDICTED: cytochrome b5 [Drosophila elegans][more]
gi|914569912|gb|KOB73428.1|7.928e-2143.24Cytochrome b5 [Operophtera brumata][more]
gi|195436722|ref|XP_002066306.1|8.456e-2155.13cytochrome b5 [Drosophila willistoni] >gi|19416239... [more]
gi|1321306306|ref|XP_023295137.1|8.742e-2150.59cytochrome b5 [Lucilia cuprina] >gi|906458265|gb|K... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold488_size158317supercontigscaffold488_size158317:121001..122235 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
NoteF:metal ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold488_size158317-snap-gene-0.23-mRNA-1maker-scaffold488_size158317-snap-gene-0.23-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold488_size158317:121001..122235+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold488_size158317-snap-gene-0.23 ID=maker-scaffold488_size158317-snap-gene-0.23|Name=cytochrome b5-like|organism=Tigriopus kingsejongensis|type=gene|length=1235bp|location=Sequence derived from alignment at scaffold488_size158317:121001..122235+ (Tigriopus kingsejongensis)
TCCGAATGTGGCCATTTGGACGCGCGGGCGCGCTTCCGACTCTAGATTTA ACGAGCCTGCCTCAATCACAAACTCTCAGTTGCTTCCAAGCTCTCACAGT TTTCACATCGTTCCGTTCTTGTTCCACAGGAAAGTTCGAAATTCCCTCTC AAAGCACAATGGCTTTCTGGAATCCCATTCAGCTCAAGGGCATCTTCGGA TACCTCCGTCAAGGCTCCAATGCCAAGGAGATCGACCTCGGCACGGACAG CAACGGCAAATCTCAAGTTGTGGTAAGTGTCAAGCGTGACTCGGCCGCCA AAAAATGTCGGCATGGTTGTCATTGTCTTCCTTTCTCACTTTCTAGGAAC GCGCCATGGTTAGCAGCGCCTTGAGGATTGTGGCCAATGCGTTGTCACGG GCCAACTCCCAAGTGACCGAGGAAATCAGCGTGGGCGATGTCTTGGAGCG GTTGGAGCTCAGCGATAATCTCTCTGAGCCGGTCGGCCTTTTTACTCGAC CTCGCGTCTTGACCCGCCAAGAGACCACCAATTCCATCGAGGACGAAGAC ATCTCGACTTCCGTTGGATCCTCCTTGGCTTCCTCTCCTGACTCGTCGGC CACGAATCTGGAGGGTGTCCAAGACATCATTCCCGTGGACGAAGAGACCA ACTTGCCCATTATCTACCTGTGCGAAGTGAGAGAGCACGACTCCATGGAC GACGGCTGGATGATCCTCTACGATAAGGTCTACGATGTGACCAACTTCAT CAATGAACATCCCGGAGGCGCCTTCGTCATGATGGAATACTTGGGCCGCG ATGCCACCTCGGCTTTCGCCGGACATTCCCGCGATGCCGTTGAGATGCTC GACGACCTCGTCTTGGGCATTCTGCCCAAGACCGAGCGCTCTAATGTCTA CTCCAAACCCACTTTCGTATAGCCTTGTTTGACAACCACTGAGCCTCTTT GTCTGTTGGCCAATTGTCAAACAATCGCAACCAAAGACTGTCCACAATGT TCTCACTCAGAGATTTGCATTTATACACACACCATTAGCAAAAAAGATCT ACTATTCCCTCTCATCTAAATCTTGCCTCTCGTGGTAAGAAGCCATAGAG TAAGCCAAATATATTTGAGGTGCTGCCATACTTTGATGTATTTGTTGTAG TGCCCAAGCACCTGAATGTCAATTGTGCATTCAACAATTTTGTTCTTATA GCTTTTTGTGTCTAATATCGCAATAAATGTTATAC
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Synonyms
The feature 'cytochrome b5-like' has the following synonyms
Synonym
Tk09351
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