cytochrome b5-like, maker-scaffold488_size158317-snap-gene-0.23 (gene) Tigriopus kingsejongensis

Overview
Namecytochrome b5-like
Unique Namemaker-scaffold488_size158317-snap-gene-0.23
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
BLAST of cytochrome b5-like vs. L. salmonis genes
Match: EMLSAG00000012951 (supercontig:LSalAtl2s:LSalAtl2s98:1088244:1088871:-1 gene:EMLSAG00000012951 transcript:EMLSAT00000012951 description:"snap_masked-LSalAtl2s98-processed-gene-10.6")

HSP 1 Score: 72.4034 bits (176), Expect = 3.985e-16
Identity = 39/83 (46.99%), Postives = 56/83 (67.47%), Query Frame = 0
Query:  194 IIYLCEVREHD--SMDDG--WMILYDKVYDVTNFINEHPGGAFVMMEYLGRDATSAF--AGHSRDAVEMLDDLVLGILPKTER 270
            I  L EV++H+  S D    W I+ ++VYDV+NF++EHPGG  V++E  G D+T AF   GHS DA EM+ D ++G L +T+R
Sbjct:    4 IYTLEEVKKHNGSSKDSNSVWTIIDNQVYDVSNFLDEHPGGEEVLIENGGMDSTEAFEDVGHSSDAREMMKDYLIGELSETDR 86          
BLAST of cytochrome b5-like vs. SwissProt
Match: gi|20138070|sp|Q9USM6.1|CYB52_SCHPO (RecName: Full=Probable cytochrome b5 2)

HSP 1 Score: 70.0922 bits (170), Expect = 7.387e-14
Identity = 33/77 (42.86%), Postives = 53/77 (68.83%), Query Frame = 0
Query:  195 IYLCEVREHDSMDDGWMILYDKVYDVTNFINEHPGGAFVMMEYLGRDATSAF--AGHSRDAVEMLDDLVLGILPKTE 269
            I + EV +H++ DD ++++ DKVYD++ F++ HPGG  V+++  GRDA+  F   GHS DA E+L+   +G L +TE
Sbjct:    6 ITVEEVLKHNTRDDLYIVVKDKVYDISKFLDAHPGGEEVLVDLAGRDASGPFEDVGHSEDAQELLEKFYIGNLLRTE 82          
BLAST of cytochrome b5-like vs. SwissProt
Match: gi|117809|sp|P00167.2|CYB5_HUMAN (RecName: Full=Cytochrome b5; AltName: Full=Microsomal cytochrome b5 type A; Short=MCB5)

HSP 1 Score: 70.0922 bits (170), Expect = 7.825e-14
Identity = 35/83 (42.17%), Postives = 48/83 (57.83%), Query Frame = 0
Query:  197 LCEVREHDSMDDGWMILYDKVYDVTNFINEHPGGAFVMMEYLGRDATSAF--AGHSRDAVEMLDDLVLGILPKTERSNVYSKP 277
            L E+++H+     W+IL+ KVYD+T F+ EHPGG  V+ E  G DAT  F   GHS DA EM    ++G L   +R  +   P
Sbjct:   14 LEEIQKHNHSKSTWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTDAREMSKTFIIGELHPDDRPKLNKPP 96          
BLAST of cytochrome b5-like vs. SwissProt
Match: gi|73621241|sp|P00170.3|CYB5_HORSE (RecName: Full=Cytochrome b5)

HSP 1 Score: 69.707 bits (169), Expect = 1.051e-13
Identity = 37/94 (39.36%), Postives = 57/94 (60.64%), Query Frame = 0
Query:  188 EETNLPIIY--LCEVREHDSMDDGWMILYDKVYDVTNFINEHPGGAFVMMEYLGRDATSAFA--GHSRDAVEMLDDLVLGILPKTERSNVYSKP 277
            E+++  + Y  L E+++H+     W+IL+ KVYD+T F+ +HPGG  V+ E  G DAT  F   GHS DA E+    ++G L   +RS + +KP
Sbjct:    3 EQSDKAVKYYTLEEIKKHNHSKSTWLILHHKVYDLTKFLEDHPGGEEVLREQAGGDATENFEDIGHSTDARELSKTFIIGELHPDDRSKI-AKP 95          
BLAST of cytochrome b5-like vs. SwissProt
Match: gi|20137715|sp|O94391.1|CYB51_SCHPO (RecName: Full=Probable cytochrome b5 1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.136e-13
Identity = 37/83 (44.58%), Postives = 56/83 (67.47%), Query Frame = 0
Query:  199 EVREHDSMDDGWMILYDKVYDVTNFINEHPGGAFVMMEYLGRDATSAFA--GHSRDAVEMLDDLVLGIL-PKT-ERSNVYSKP 277
            E+ EH++  D +M++  KVYDV+NF ++HPGG  +M++Y G+DAT A+   GHS  A E+L+++ +G L P T ER     KP
Sbjct:   10 EIVEHNNSKDMYMVINGKVYDVSNFADDHPGGLDIMLDYAGQDATKAYQDIGHSIAADELLEEMYIGDLKPGTEERLKELKKP 92          
BLAST of cytochrome b5-like vs. SwissProt
Match: gi|231928|sp|P00173.2|CYB5_RAT (RecName: Full=Cytochrome b5)

HSP 1 Score: 69.3218 bits (168), Expect = 1.398e-13
Identity = 36/84 (42.86%), Postives = 51/84 (60.71%), Query Frame = 0
Query:  197 LCEVREHDSMDDGWMILYDKVYDVTNFINEHPGGAFVMMEYLGRDATSAF--AGHSRDAVEMLDDLVLGILPKTERSNVYSKPT 278
            L E+++H      W+IL+ KVYD+T F+ EHPGG  V+ E  G DAT  F   GHS DA E+    ++G L   +RS + +KP+
Sbjct:   14 LEEIQKHKDSKSTWVILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTDARELSKTYIIGELHPDDRSKI-AKPS 96          
BLAST of cytochrome b5-like vs. SwissProt
Match: gi|51701334|sp|Q874I5.1|CYB5_CANTR (RecName: Full=Cytochrome b5)

HSP 1 Score: 68.9366 bits (167), Expect = 1.586e-13
Identity = 34/70 (48.57%), Postives = 49/70 (70.00%), Query Frame = 0
Query:  199 EVREHDSMDDGWMILYDKVYDVTNFINEHPGGAFVMMEYLGRDATSAF--AGHSRDAVEMLDDLVLGILP 266
            EV +H + DD W+IL  KVY+++N+I+EHPGG  V+++  G DAT AF   GHS +A E+L+ L +G L 
Sbjct:   15 EVAQHTTHDDLWVILNGKVYNISNYIDEHPGGEEVILDCAGTDATEAFDDIGHSDEAHEILEKLYIGNLK 84          
BLAST of cytochrome b5-like vs. SwissProt
Match: gi|62510660|sp|Q9CQX2.1|CYB5B_MOUSE (RecName: Full=Cytochrome b5 type B; AltName: Full=Cytochrome b5 outer mitochondrial membrane isoform; Flags: Precursor)

HSP 1 Score: 69.3218 bits (168), Expect = 1.663e-13
Identity = 33/77 (42.86%), Postives = 50/77 (64.94%), Query Frame = 0
Query:  189 ETNLPIIYLCEVREHDSMDDGWMILYDKVYDVTNFINEHPGGAFVMMEYLGRDATSAF--AGHSRDAVEMLDDLVLG 263
            E ++    L EV + +S ++ WM+++ +VYD+T F++EHPGG  V++E  G DAT +F   GHS DA EML    +G
Sbjct:   17 EPSVTYYRLEEVAKRNSAEETWMVIHGRVYDITRFLSEHPGGEEVLLEQAGADATESFEDVGHSPDAREMLKQYYIG 93          
BLAST of cytochrome b5-like vs. SwissProt
Match: gi|3023608|sp|P56395.2|CYB5_MOUSE (RecName: Full=Cytochrome b5)

HSP 1 Score: 68.9366 bits (167), Expect = 1.696e-13
Identity = 36/84 (42.86%), Postives = 51/84 (60.71%), Query Frame = 0
Query:  197 LCEVREHDSMDDGWMILYDKVYDVTNFINEHPGGAFVMMEYLGRDATSAF--AGHSRDAVEMLDDLVLGILPKTERSNVYSKPT 278
            L E+++H      W+IL+ KVYD+T F+ EHPGG  V+ E  G DAT  F   GHS DA E+    ++G L   +RS + +KP+
Sbjct:   14 LEEIQKHKDSKSTWVILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTDARELSKTYIIGELHPDDRSKI-AKPS 96          
BLAST of cytochrome b5-like vs. SwissProt
Match: gi|75308960|sp|Q9FDW8.1|CYB5A_ARATH (RecName: Full=Cytochrome b5 isoform A; Short=AtCb5-A; AltName: Full=Cytochrome b5 isoform D; Short=AtCb5-D)

HSP 1 Score: 68.5514 bits (166), Expect = 3.067e-13
Identity = 33/85 (38.82%), Postives = 52/85 (61.18%), Query Frame = 0
Query:  199 EVREHDSMDDGWMILYDKVYDVTNFINEHPGGAFVMMEYLGRDATSAF--AGHSRDAVEMLDDLVLG-----ILPKTERSNVYSK 276
            E   H+  DD W+++  KVYDV+++++EHPGG  V++   G+DAT  F  AGHS+DA E+++   +G      LP+     +Y K
Sbjct:   12 EAATHNKQDDCWVVIDGKVYDVSSYMDEHPGGDDVLLAVAGKDATDDFEDAGHSKDARELMEKYFIGELDESSLPEIPELKIYKK 96          
BLAST of cytochrome b5-like vs. SwissProt
Match: gi|1345879|sp|P49097.1|CYB5_CUSRE (RecName: Full=Cytochrome b5)

HSP 1 Score: 68.1662 bits (165), Expect = 3.500e-13
Identity = 31/69 (44.93%), Postives = 45/69 (65.22%), Query Frame = 0
Query:  197 LCEVREHDSMDDGWMILYDKVYDVTNFINEHPGGAFVMMEYLGRDATSAFA--GHSRDAVEMLDDLVLG 263
            L EV EH   +D W+++  KVYDVT F+++HPGGA V++    +DAT  F   GHS  A  M+D++ +G
Sbjct:    9 LAEVSEHSQPNDCWLVIGGKVYDVTKFLDDHPGGADVLLSSTAKDATDDFEDIGHSSSARAMMDEMCVG 77          
BLAST of cytochrome b5-like vs. nr
Match: gi|1199382715|ref|XP_021185944.1| (cytochrome b5-like [Helicoverpa armigera])

HSP 1 Score: 96.6709 bits (239), Expect = 4.661e-21
Identity = 46/97 (47.42%), Postives = 64/97 (65.98%), Query Frame = 0
Query:  183 IIPVDEETNLPIIYLCEVREHDSMDDGWMILYDKVYDVTNFINEHPGGAFVMMEYLGRDATSAF--AGHSRDAVEMLDDLVLGILPKTERSNVYSKP 277
            I+P   E     I L EVR HD+  D W+++YD+VYD+T F +EHPGGA +M EY G DA++AF  +GHSR A + L+  ++G LP  ER  +Y +P
Sbjct:   54 IVPGAPEAKDRTITLAEVRMHDTPQDCWVVIYDRVYDITTFFDEHPGGADIMFEYAGHDASTAFRSSGHSRMATKALERFLVGELPMQER--MYRRP 148          
BLAST of cytochrome b5-like vs. nr
Match: gi|1036899693|ref|XP_017117173.1| (PREDICTED: cytochrome b5 [Drosophila elegans])

HSP 1 Score: 95.9005 bits (237), Expect = 5.867e-21
Identity = 43/78 (55.13%), Postives = 60/78 (76.92%), Query Frame = 0
Query:  191 NLPIIYLCEVREHDSMDDGWMILYDKVYDVTNFINEHPGGAFVMMEYLGRDATSAF--AGHSRDAVEMLDDLVLGILP 266
            +LP I L EV +HDS DD W+++YD+VYDVT+F+ +HPGG  V+M++ GRDAT AF   GHS DA+E++ D ++G LP
Sbjct:   40 DLPEIALEEVAQHDSFDDCWVVIYDRVYDVTHFLRDHPGGDDVIMDHAGRDATIAFHGTGHSGDAIELMKDFLIGQLP 117          
BLAST of cytochrome b5-like vs. nr
Match: gi|914569912|gb|KOB73428.1| (Cytochrome b5 [Operophtera brumata])

HSP 1 Score: 95.9005 bits (237), Expect = 7.928e-21
Identity = 48/111 (43.24%), Postives = 72/111 (64.86%), Query Frame = 0
Query:  169 SPDSSATNLEGVQDIIPVDEETNLPIIYLCEVREHDSMDDGWMILYDKVYDVTNFINEHPGGAFVMMEYLGRDATSAF--AGHSRDAVEMLDDLVLGILPKTERSNVYSKP 277
            +P S  T  +    I+P   E     I L EV  HD+ +D W+++YD+VYD++ F++EHPGGA +M+EY GRDA++AF  +GHSR A + L+  ++G LP  ER  +Y +P
Sbjct:   39 NPWSVETKSQWSDRIVPGTPEAKDRTITLAEVAYHDTPNDCWVVIYDRVYDISTFLDEHPGGAEIMLEYAGRDASTAFRGSGHSRMASKALERFLVGELPMPER--MYRRP 147          
BLAST of cytochrome b5-like vs. nr
Match: gi|195436722|ref|XP_002066306.1| (cytochrome b5 [Drosophila willistoni] >gi|194162391|gb|EDW77292.1| uncharacterized protein Dwil_GK18221 [Drosophila willistoni])

HSP 1 Score: 95.5153 bits (236), Expect = 8.456e-21
Identity = 43/78 (55.13%), Postives = 56/78 (71.79%), Query Frame = 0
Query:  195 IYLCEVREHDSMDDGWMILYDKVYDVTNFINEHPGGAFVMMEYLGRDATSAF--AGHSRDAVEMLDDLVLGILPKTER 270
            I L EV  HDS DD W+++YD+VYDVT F+ EHPGG  V+M++ GRDAT AF   GHS DA+E + D ++G LP  +R
Sbjct:   46 ITLAEVAHHDSFDDCWIVVYDRVYDVTRFLREHPGGDDVIMDHAGRDATIAFHGTGHSSDAIEQMRDFLIGELPIEQR 123          
BLAST of cytochrome b5-like vs. nr
Match: gi|1321306306|ref|XP_023295137.1| (cytochrome b5 [Lucilia cuprina] >gi|906458265|gb|KNC21516.1| hypothetical protein FF38_09044 [Lucilia cuprina])

HSP 1 Score: 95.1301 bits (235), Expect = 8.742e-21
Identity = 43/85 (50.59%), Postives = 61/85 (71.76%), Query Frame = 0
Query:  188 EETNLPIIYLCEVREHDSMDDGWMILYDKVYDVTNFINEHPGGAFVMMEYLGRDATSAF--AGHSRDAVEMLDDLVLGILPKTER 270
            ++  LP I L  V +HD   D W+++YD+VYD+T+F+  HPGGA V+M+Y GRDAT AF   GHSRDA+E + D ++G LP+ E+
Sbjct:   35 QKAALPEISLDAVSQHDDYCDCWVVIYDRVYDLTSFLQNHPGGADVIMDYAGRDATLAFHGTGHSRDAIEQMRDYLIGELPEHEK 119          
The following BLAST results are available for this feature:
BLAST of cytochrome b5-like vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAG000000129513.985e-1646.99supercontig:LSalAtl2s:LSalAtl2s98:1088244:1088871:... [more]
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BLAST of cytochrome b5-like vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
gi|20138070|sp|Q9USM6.1|CYB52_SCHPO7.387e-1442.86RecName: Full=Probable cytochrome b5 2[more]
gi|117809|sp|P00167.2|CYB5_HUMAN7.825e-1442.17RecName: Full=Cytochrome b5; AltName: Full=Microso... [more]
gi|73621241|sp|P00170.3|CYB5_HORSE1.051e-1339.36RecName: Full=Cytochrome b5[more]
gi|20137715|sp|O94391.1|CYB51_SCHPO1.136e-1344.58RecName: Full=Probable cytochrome b5 1[more]
gi|231928|sp|P00173.2|CYB5_RAT1.398e-1342.86RecName: Full=Cytochrome b5[more]
gi|51701334|sp|Q874I5.1|CYB5_CANTR1.586e-1348.57RecName: Full=Cytochrome b5[more]
gi|62510660|sp|Q9CQX2.1|CYB5B_MOUSE1.663e-1342.86RecName: Full=Cytochrome b5 type B; AltName: Full=... [more]
gi|3023608|sp|P56395.2|CYB5_MOUSE1.696e-1342.86RecName: Full=Cytochrome b5[more]
gi|75308960|sp|Q9FDW8.1|CYB5A_ARATH3.067e-1338.82RecName: Full=Cytochrome b5 isoform A; Short=AtCb5... [more]
gi|1345879|sp|P49097.1|CYB5_CUSRE3.500e-1344.93RecName: Full=Cytochrome b5[more]

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BLAST of cytochrome b5-like vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|1199382715|ref|XP_021185944.1|4.661e-2147.42cytochrome b5-like [Helicoverpa armigera][more]
gi|1036899693|ref|XP_017117173.1|5.867e-2155.13PREDICTED: cytochrome b5 [Drosophila elegans][more]
gi|914569912|gb|KOB73428.1|7.928e-2143.24Cytochrome b5 [Operophtera brumata][more]
gi|195436722|ref|XP_002066306.1|8.456e-2155.13cytochrome b5 [Drosophila willistoni] >gi|19416239... [more]
gi|1321306306|ref|XP_023295137.1|8.742e-2150.59cytochrome b5 [Lucilia cuprina] >gi|906458265|gb|K... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold488_size158317supercontigscaffold488_size158317:121001..122235 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
NoteF:metal ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold488_size158317-snap-gene-0.23-mRNA-1maker-scaffold488_size158317-snap-gene-0.23-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold488_size158317:121001..122235+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold488_size158317-snap-gene-0.23 ID=maker-scaffold488_size158317-snap-gene-0.23|Name=cytochrome b5-like|organism=Tigriopus kingsejongensis|type=gene|length=1235bp|location=Sequence derived from alignment at scaffold488_size158317:121001..122235+ (Tigriopus kingsejongensis)
TCCGAATGTGGCCATTTGGACGCGCGGGCGCGCTTCCGACTCTAGATTTA ACGAGCCTGCCTCAATCACAAACTCTCAGTTGCTTCCAAGCTCTCACAGT TTTCACATCGTTCCGTTCTTGTTCCACAGGAAAGTTCGAAATTCCCTCTC AAAGCACAATGGCTTTCTGGAATCCCATTCAGCTCAAGGGCATCTTCGGA TACCTCCGTCAAGGCTCCAATGCCAAGGAGATCGACCTCGGCACGGACAG CAACGGCAAATCTCAAGTTGTGGTAAGTGTCAAGCGTGACTCGGCCGCCA AAAAATGTCGGCATGGTTGTCATTGTCTTCCTTTCTCACTTTCTAGGAAC GCGCCATGGTTAGCAGCGCCTTGAGGATTGTGGCCAATGCGTTGTCACGG GCCAACTCCCAAGTGACCGAGGAAATCAGCGTGGGCGATGTCTTGGAGCG GTTGGAGCTCAGCGATAATCTCTCTGAGCCGGTCGGCCTTTTTACTCGAC CTCGCGTCTTGACCCGCCAAGAGACCACCAATTCCATCGAGGACGAAGAC ATCTCGACTTCCGTTGGATCCTCCTTGGCTTCCTCTCCTGACTCGTCGGC CACGAATCTGGAGGGTGTCCAAGACATCATTCCCGTGGACGAAGAGACCA ACTTGCCCATTATCTACCTGTGCGAAGTGAGAGAGCACGACTCCATGGAC GACGGCTGGATGATCCTCTACGATAAGGTCTACGATGTGACCAACTTCAT CAATGAACATCCCGGAGGCGCCTTCGTCATGATGGAATACTTGGGCCGCG ATGCCACCTCGGCTTTCGCCGGACATTCCCGCGATGCCGTTGAGATGCTC GACGACCTCGTCTTGGGCATTCTGCCCAAGACCGAGCGCTCTAATGTCTA CTCCAAACCCACTTTCGTATAGCCTTGTTTGACAACCACTGAGCCTCTTT GTCTGTTGGCCAATTGTCAAACAATCGCAACCAAAGACTGTCCACAATGT TCTCACTCAGAGATTTGCATTTATACACACACCATTAGCAAAAAAGATCT ACTATTCCCTCTCATCTAAATCTTGCCTCTCGTGGTAAGAAGCCATAGAG TAAGCCAAATATATTTGAGGTGCTGCCATACTTTGATGTATTTGTTGTAG TGCCCAAGCACCTGAATGTCAATTGTGCATTCAACAATTTTGTTCTTATA GCTTTTTGTGTCTAATATCGCAATAAATGTTATAC
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Synonyms
The feature 'cytochrome b5-like' has the following synonyms
Synonym
Tk09351
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