cytochrome b5-like, maker-scaffold488_size158317-snap-gene-0.23 (gene) Tigriopus kingsejongensis

Overview
Namecytochrome b5-like
Unique Namemaker-scaffold488_size158317-snap-gene-0.23
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
BLAST of cytochrome b5-like vs. L. salmonis genes
Match: EMLSAG00000012951 (supercontig:LSalAtl2s:LSalAtl2s98:1088244:1088871:-1 gene:EMLSAG00000012951 transcript:EMLSAT00000012951 description:"snap_masked-LSalAtl2s98-processed-gene-10.6")

HSP 1 Score: 72.4034 bits (176), Expect = 3.985e-16
Identity = 39/83 (46.99%), Postives = 56/83 (67.47%), Query Frame = 0
Query:  194 IIYLCEVREHD--SMDDG--WMILYDKVYDVTNFINEHPGGAFVMMEYLGRDATSAF--AGHSRDAVEMLDDLVLGILPKTER 270
            I  L EV++H+  S D    W I+ ++VYDV+NF++EHPGG  V++E  G D+T AF   GHS DA EM+ D ++G L +T+R
Sbjct:    4 IYTLEEVKKHNGSSKDSNSVWTIIDNQVYDVSNFLDEHPGGEEVLIENGGMDSTEAFEDVGHSSDAREMMKDYLIGELSETDR 86          
BLAST of cytochrome b5-like vs. SwissProt
Match: gi|1345882|sp|P49098.1|CYB5_TOBAC (RecName: Full=Cytochrome b5)

HSP 1 Score: 68.1662 bits (165), Expect = 3.885e-13
Identity = 31/72 (43.06%), Postives = 46/72 (63.89%), Query Frame = 0
Query:  194 IIYLCEVREHDSMDDGWMILYDKVYDVTNFINEHPGGAFVMMEYLGRDATSAF--AGHSRDAVEMLDDLVLG 263
            +  L EV +H++  D W+++  KVYDVT F+++HPGG  V++   G+DAT  F   GHS  A  MLD+  +G
Sbjct:    7 VFTLAEVSQHNNAKDCWLVISGKVYDVTKFLDDHPGGDEVLLSATGKDATDDFEDVGHSSSARAMLDEYYVG 78          
BLAST of cytochrome b5-like vs. SwissProt
Match: gi|12229735|sp|O04354.1|CYB5_BOROF (RecName: Full=Cytochrome b5)

HSP 1 Score: 67.781 bits (164), Expect = 4.427e-13
Identity = 33/72 (45.83%), Postives = 45/72 (62.50%), Query Frame = 0
Query:  194 IIYLCEVREHDSMDDGWMILYDKVYDVTNFINEHPGGAFVMMEYLGRDATSAFA--GHSRDAVEMLDDLVLG 263
            I  L EV +H++  D W+I+  KVYDVT F+ +HPGG  V++   G+DAT  F   GHS  A  MLD+  +G
Sbjct:    4 IFTLAEVAQHNNSKDCWLIINGKVYDVTKFLEDHPGGDDVLLSATGKDATDDFEDIGHSSSAKAMLDEYYVG 75          
BLAST of cytochrome b5-like vs. SwissProt
Match: gi|12643974|sp|P04166.2|CYB5B_RAT (RecName: Full=Cytochrome b5 type B; AltName: Full=Cytochrome b5 outer mitochondrial membrane isoform; Flags: Precursor)

HSP 1 Score: 67.781 bits (164), Expect = 6.466e-13
Identity = 31/69 (44.93%), Postives = 47/69 (68.12%), Query Frame = 0
Query:  197 LCEVREHDSMDDGWMILYDKVYDVTNFINEHPGGAFVMMEYLGRDATSAF--AGHSRDAVEMLDDLVLG 263
            L EV + ++ ++ WM+++ +VYD+T F++EHPGG  V++E  G DAT +F   GHS DA EML    +G
Sbjct:   25 LEEVAKRNTAEETWMVIHGRVYDITRFLSEHPGGEEVLLEQAGADATESFEDVGHSPDAREMLKQYYIG 93          
BLAST of cytochrome b5-like vs. SwissProt
Match: gi|75316008|sp|Q9ZWT2.1|CYB5D_ARATH (RecName: Full=Cytochrome B5 isoform D; Short=AtCb5-D; AltName: Full=Cytochrome b5 isoform B; Short=AtCb5-B)

HSP 1 Score: 67.3958 bits (163), Expect = 9.193e-13
Identity = 32/72 (44.44%), Postives = 45/72 (62.50%), Query Frame = 0
Query:  194 IIYLCEVREHDSMDDGWMILYDKVYDVTNFINEHPGGAFVMMEYLGRDATSAF--AGHSRDAVEMLDDLVLG 263
            +  L EV +H S  D W+++  KVYDVT F+++HPGG  V++   G+DAT  F   GHS  A  MLD+  +G
Sbjct:    7 VFTLSEVSQHSSAKDCWIVIDGKVYDVTKFLDDHPGGDEVILTSTGKDATDDFEDVGHSSTAKAMLDEYYVG 78          
BLAST of cytochrome b5-like vs. SwissProt
Match: gi|117805|sp|P00168.2|CYB5_ALOSE (RecName: Full=Cytochrome b5)

HSP 1 Score: 65.0846 bits (157), Expect = 1.440e-12
Identity = 33/76 (43.42%), Postives = 46/76 (60.53%), Query Frame = 0
Query:  197 LCEVREHDSMDDGWMILYDKVYDVTNFINEHPGGAFVMMEYLGRDATSAF--AGHSRDAVEMLDDLVLGILPKTER 270
            L E+++H+     W+IL+ KVYD+T F+ EHPGG  V+ E  G DAT  F   GHS DA E+    ++G L   +R
Sbjct:   10 LEEIQKHNHSKSTWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDATEDFEDVGHSTDARELSKTYIIGELHPDDR 85          
BLAST of cytochrome b5-like vs. nr
Match: gi|1036842216|ref|XP_017044892.1| (PREDICTED: cytochrome b5 [Drosophila ficusphila])

HSP 1 Score: 97.0561 bits (240), Expect = 1.764e-21
Identity = 43/82 (52.44%), Postives = 61/82 (74.39%), Query Frame = 0
Query:  191 NLPIIYLCEVREHDSMDDGWMILYDKVYDVTNFINEHPGGAFVMMEYLGRDATSAF--AGHSRDAVEMLDDLVLGILPKTER 270
            +LP I L EV +HDS DD W+++YD+VYDVT+F+ +HPGG  V+M++ GRDAT AF   GHS DA+E++ D ++G LP  + 
Sbjct:   40 DLPEISLEEVAQHDSFDDCWVVIYDRVYDVTHFLRDHPGGDDVIMDHAGRDATIAFHGTGHSSDAIELMKDFLIGQLPTKQH 121          
BLAST of cytochrome b5-like vs. nr
Match: gi|1247034512|gb|PCG70503.1| (hypothetical protein B5V51_2894 [Heliothis virescens])

HSP 1 Score: 97.8265 bits (242), Expect = 1.818e-21
Identity = 46/97 (47.42%), Postives = 65/97 (67.01%), Query Frame = 0
Query:  183 IIPVDEETNLPIIYLCEVREHDSMDDGWMILYDKVYDVTNFINEHPGGAFVMMEYLGRDATSAF--AGHSRDAVEMLDDLVLGILPKTERSNVYSKP 277
            I+P   E     I L EVR+HD+  D W+++YD+VYD+T F +EHPGGA +M EY G DA++AF  +GHSR A + L+  ++G LP  ER  +Y +P
Sbjct:   55 IVPGAPEAKDRTITLAEVRKHDTPQDCWVVIYDRVYDITTFFDEHPGGADIMFEYAGHDASTAFRSSGHSRMATKALERFLVGELPLQER--MYRRP 149          
BLAST of cytochrome b5-like vs. nr
Match: gi|194880391|ref|XP_001974427.1| (uncharacterized protein Dere_GG21732 [Drosophila erecta] >gi|190657614|gb|EDV54827.1| uncharacterized protein Dere_GG21732 [Drosophila erecta])

HSP 1 Score: 97.0561 bits (240), Expect = 1.981e-21
Identity = 44/82 (53.66%), Postives = 61/82 (74.39%), Query Frame = 0
Query:  191 NLPIIYLCEVREHDSMDDGWMILYDKVYDVTNFINEHPGGAFVMMEYLGRDATSAF--AGHSRDAVEMLDDLVLGILPKTER 270
            +LP I L EV +HDS DD W+++YD+VYDVT+F+ +HPGG  V+M++ GRDAT AF   GHS DAVE++ D ++G LP  + 
Sbjct:   40 DLPEITLEEVAQHDSFDDCWVVIYDRVYDVTHFLRDHPGGDDVIMDHAGRDATIAFHGTGHSGDAVELMKDFLIGQLPTKQH 121          
BLAST of cytochrome b5-like vs. nr
Match: gi|195483818|ref|XP_002090446.1| (uncharacterized protein Dyak_GE13120 [Drosophila yakuba] >gi|194176547|gb|EDW90158.1| uncharacterized protein Dyak_GE13120 [Drosophila yakuba])

HSP 1 Score: 96.6709 bits (239), Expect = 2.718e-21
Identity = 43/82 (52.44%), Postives = 61/82 (74.39%), Query Frame = 0
Query:  191 NLPIIYLCEVREHDSMDDGWMILYDKVYDVTNFINEHPGGAFVMMEYLGRDATSAF--AGHSRDAVEMLDDLVLGILPKTER 270
            +LP I L EV +HDS DD W+++YD+VYDVT+F+ +HPGG  V+M++ GRDAT AF   GHS DA+E++ D ++G LP  + 
Sbjct:   40 DLPEITLEEVAQHDSFDDCWVVIYDRVYDVTHFLRDHPGGDDVIMDHAGRDATIAFHGTGHSGDAIELMKDFLIGQLPTKQH 121          
BLAST of cytochrome b5-like vs. nr
Match: gi|1036803958|ref|XP_016975136.1| (PREDICTED: cytochrome b5 [Drosophila rhopaloa])

HSP 1 Score: 96.6709 bits (239), Expect = 2.776e-21
Identity = 43/82 (52.44%), Postives = 61/82 (74.39%), Query Frame = 0
Query:  191 NLPIIYLCEVREHDSMDDGWMILYDKVYDVTNFINEHPGGAFVMMEYLGRDATSAF--AGHSRDAVEMLDDLVLGILPKTER 270
            +LP I L EV +HDS DD W+++YD+VYDVT+F+ +HPGG  V+M++ GRDAT AF   GHS DA+E++ D ++G LP  + 
Sbjct:   40 DLPEISLEEVAQHDSFDDCWVVIYDRVYDVTHFLRDHPGGDDVIMDHAGRDATIAFHGTGHSGDAIELMKDFLIGQLPTKQH 121          
BLAST of cytochrome b5-like vs. nr
Match: gi|1037020789|ref|XP_017009816.1| (PREDICTED: cytochrome b5 [Drosophila takahashii])

HSP 1 Score: 96.6709 bits (239), Expect = 2.865e-21
Identity = 43/82 (52.44%), Postives = 61/82 (74.39%), Query Frame = 0
Query:  191 NLPIIYLCEVREHDSMDDGWMILYDKVYDVTNFINEHPGGAFVMMEYLGRDATSAF--AGHSRDAVEMLDDLVLGILPKTER 270
            +LP I L EV +HDS DD W+++YD+VYDVT+F+ +HPGG  V+M++ GRDAT AF   GHS DA+E++ D ++G LP  + 
Sbjct:   40 DLPEISLEEVAQHDSFDDCWVVIYDRVYDVTHFLRDHPGGDDVIMDHAGRDATIAFHGTGHSGDAIELMKDFLIGQLPTKQH 121          
BLAST of cytochrome b5-like vs. nr
Match: gi|1036760689|ref|XP_017063933.1| (PREDICTED: cytochrome b5 [Drosophila eugracilis])

HSP 1 Score: 96.6709 bits (239), Expect = 2.926e-21
Identity = 43/82 (52.44%), Postives = 61/82 (74.39%), Query Frame = 0
Query:  191 NLPIIYLCEVREHDSMDDGWMILYDKVYDVTNFINEHPGGAFVMMEYLGRDATSAF--AGHSRDAVEMLDDLVLGILPKTER 270
            +LP I L EV +HDS DD W+++YD+VYDVT+F+ +HPGG  V+M++ GRDAT AF   GHS DA+E++ D ++G LP  + 
Sbjct:   40 DLPEISLEEVAQHDSFDDCWVVIYDRVYDVTHFLRDHPGGDDVIMDHAGRDATIAFHGTGHSGDAIELMKDFLIGQLPTKQH 121          
BLAST of cytochrome b5-like vs. nr
Match: gi|1133419045|ref|XP_019865062.1| (PREDICTED: cytochrome b5 [Aethina tumida])

HSP 1 Score: 96.2857 bits (238), Expect = 2.932e-21
Identity = 47/98 (47.96%), Postives = 68/98 (69.39%), Query Frame = 0
Query:  185 PVDEETNLP---IIYLCEVREHDSMDDGWMILYDKVYDVTNFINEHPGGAFVMMEYLGRDATSAF--AGHSRDAVEMLDDLVLGILPKTERSNVYSKP 277
            P  E+T  P   II L EV  HDS  D W+++YD+VYD+T+F++EHPGG+ +++EY GRDA+ AF  +GHS+ A+  LD  ++G LP  ER  ++ KP
Sbjct:   19 PAQEKTYNPEERIITLDEVSWHDSAGDCWVVIYDRVYDITDFLDEHPGGSDILLEYAGRDASVAFRGSGHSKQAIRALDRFLIGELPMHER--IFRKP 114          
BLAST of cytochrome b5-like vs. nr
Match: gi|195035595|ref|XP_001989261.1| (GH10148 [Drosophila grimshawi] >gi|193905261|gb|EDW04128.1| GH10148 [Drosophila grimshawi])

HSP 1 Score: 96.2857 bits (238), Expect = 3.528e-21
Identity = 50/108 (46.30%), Postives = 68/108 (62.96%), Query Frame = 0
Query:  165 SLASSPDSSATNLEGVQDIIPVDEETNLPIIYLCEVREHDSMDDGWMILYDKVYDVTNFINEHPGGAFVMMEYLGRDATSAF--AGHSRDAVEMLDDLVLGILPKTER 270
            S+ S P S    +E  +  + V     +P I L EV  HDS DD W+++YD+VYDVT+F+ EHPGG  V+M++ GRDAT AF   GHSR AVE +   ++G LP  +R
Sbjct:   20 SIKSKPGSDLIMIEKTKAKLEV---KLVPEITLEEVAHHDSYDDCWIVIYDRVYDVTHFLREHPGGDDVIMDHAGRDATIAFHGTGHSRHAVEQMRQFLIGELPAAQR 124          
BLAST of cytochrome b5-like vs. nr
Match: gi|1209697439|gb|OWR49520.1| (hypothetical protein KGM_211142 [Danaus plexippus plexippus])

HSP 1 Score: 97.0561 bits (240), Expect = 3.680e-21
Identity = 47/111 (42.34%), Postives = 71/111 (63.96%), Query Frame = 0
Query:  169 SPDSSATNLEGVQDIIPVDEETNLPIIYLCEVREHDSMDDGWMILYDKVYDVTNFINEHPGGAFVMMEYLGRDATSAF--AGHSRDAVEMLDDLVLGILPKTERSNVYSKP 277
            SP S     +    I+P   E    I+ L E+  HD+ DD W+++YD+VYD++ F+ EHPGG  +M+EY GRDA++AF  +GHS+ A++ LD  ++G LP  ER  +Y +P
Sbjct:   39 SPWSVEKKPKWSTKIVPGAPEARDRILTLAEISHHDTRDDCWVVIYDRVYDISTFLYEHPGGDEIMLEYAGRDASTAFRSSGHSKMALKALDRFLVGELPMHER--MYRRP 147          
The following BLAST results are available for this feature:
BLAST of cytochrome b5-like vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAG000000129513.985e-1646.99supercontig:LSalAtl2s:LSalAtl2s98:1088244:1088871:... [more]
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BLAST of cytochrome b5-like vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
gi|1345882|sp|P49098.1|CYB5_TOBAC3.885e-1343.06RecName: Full=Cytochrome b5[more]
gi|12229735|sp|O04354.1|CYB5_BOROF4.427e-1345.83RecName: Full=Cytochrome b5[more]
gi|12643974|sp|P04166.2|CYB5B_RAT6.466e-1344.93RecName: Full=Cytochrome b5 type B; AltName: Full=... [more]
gi|75316008|sp|Q9ZWT2.1|CYB5D_ARATH9.193e-1344.44RecName: Full=Cytochrome B5 isoform D; Short=AtCb5... [more]
gi|117805|sp|P00168.2|CYB5_ALOSE1.440e-1243.42RecName: Full=Cytochrome b5[more]

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BLAST of cytochrome b5-like vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|1036842216|ref|XP_017044892.1|1.764e-2152.44PREDICTED: cytochrome b5 [Drosophila ficusphila][more]
gi|1247034512|gb|PCG70503.1|1.818e-2147.42hypothetical protein B5V51_2894 [Heliothis viresce... [more]
gi|194880391|ref|XP_001974427.1|1.981e-2153.66uncharacterized protein Dere_GG21732 [Drosophila e... [more]
gi|195483818|ref|XP_002090446.1|2.718e-2152.44uncharacterized protein Dyak_GE13120 [Drosophila y... [more]
gi|1036803958|ref|XP_016975136.1|2.776e-2152.44PREDICTED: cytochrome b5 [Drosophila rhopaloa][more]
gi|1037020789|ref|XP_017009816.1|2.865e-2152.44PREDICTED: cytochrome b5 [Drosophila takahashii][more]
gi|1036760689|ref|XP_017063933.1|2.926e-2152.44PREDICTED: cytochrome b5 [Drosophila eugracilis][more]
gi|1133419045|ref|XP_019865062.1|2.932e-2147.96PREDICTED: cytochrome b5 [Aethina tumida][more]
gi|195035595|ref|XP_001989261.1|3.528e-2146.30GH10148 [Drosophila grimshawi] >gi|193905261|gb|ED... [more]
gi|1209697439|gb|OWR49520.1|3.680e-2142.34hypothetical protein KGM_211142 [Danaus plexippus ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold488_size158317supercontigscaffold488_size158317:121001..122235 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
NoteF:metal ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold488_size158317-snap-gene-0.23-mRNA-1maker-scaffold488_size158317-snap-gene-0.23-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold488_size158317:121001..122235+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold488_size158317-snap-gene-0.23 ID=maker-scaffold488_size158317-snap-gene-0.23|Name=cytochrome b5-like|organism=Tigriopus kingsejongensis|type=gene|length=1235bp|location=Sequence derived from alignment at scaffold488_size158317:121001..122235+ (Tigriopus kingsejongensis)
TCCGAATGTGGCCATTTGGACGCGCGGGCGCGCTTCCGACTCTAGATTTA ACGAGCCTGCCTCAATCACAAACTCTCAGTTGCTTCCAAGCTCTCACAGT TTTCACATCGTTCCGTTCTTGTTCCACAGGAAAGTTCGAAATTCCCTCTC AAAGCACAATGGCTTTCTGGAATCCCATTCAGCTCAAGGGCATCTTCGGA TACCTCCGTCAAGGCTCCAATGCCAAGGAGATCGACCTCGGCACGGACAG CAACGGCAAATCTCAAGTTGTGGTAAGTGTCAAGCGTGACTCGGCCGCCA AAAAATGTCGGCATGGTTGTCATTGTCTTCCTTTCTCACTTTCTAGGAAC GCGCCATGGTTAGCAGCGCCTTGAGGATTGTGGCCAATGCGTTGTCACGG GCCAACTCCCAAGTGACCGAGGAAATCAGCGTGGGCGATGTCTTGGAGCG GTTGGAGCTCAGCGATAATCTCTCTGAGCCGGTCGGCCTTTTTACTCGAC CTCGCGTCTTGACCCGCCAAGAGACCACCAATTCCATCGAGGACGAAGAC ATCTCGACTTCCGTTGGATCCTCCTTGGCTTCCTCTCCTGACTCGTCGGC CACGAATCTGGAGGGTGTCCAAGACATCATTCCCGTGGACGAAGAGACCA ACTTGCCCATTATCTACCTGTGCGAAGTGAGAGAGCACGACTCCATGGAC GACGGCTGGATGATCCTCTACGATAAGGTCTACGATGTGACCAACTTCAT CAATGAACATCCCGGAGGCGCCTTCGTCATGATGGAATACTTGGGCCGCG ATGCCACCTCGGCTTTCGCCGGACATTCCCGCGATGCCGTTGAGATGCTC GACGACCTCGTCTTGGGCATTCTGCCCAAGACCGAGCGCTCTAATGTCTA CTCCAAACCCACTTTCGTATAGCCTTGTTTGACAACCACTGAGCCTCTTT GTCTGTTGGCCAATTGTCAAACAATCGCAACCAAAGACTGTCCACAATGT TCTCACTCAGAGATTTGCATTTATACACACACCATTAGCAAAAAAGATCT ACTATTCCCTCTCATCTAAATCTTGCCTCTCGTGGTAAGAAGCCATAGAG TAAGCCAAATATATTTGAGGTGCTGCCATACTTTGATGTATTTGTTGTAG TGCCCAAGCACCTGAATGTCAATTGTGCATTCAACAATTTTGTTCTTATA GCTTTTTGTGTCTAATATCGCAATAAATGTTATAC
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Synonyms
The feature 'cytochrome b5-like' has the following synonyms
Synonym
Tk09351
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