cytochrome b5-like, maker-scaffold488_size158317-snap-gene-0.23 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of cytochrome b5-like vs. L. salmonis genes
Match: EMLSAG00000012951 (supercontig:LSalAtl2s:LSalAtl2s98:1088244:1088871:-1 gene:EMLSAG00000012951 transcript:EMLSAT00000012951 description:"snap_masked-LSalAtl2s98-processed-gene-10.6") HSP 1 Score: 72.4034 bits (176), Expect = 3.985e-16 Identity = 39/83 (46.99%), Postives = 56/83 (67.47%), Query Frame = 0 Query: 194 IIYLCEVREHD--SMDDG--WMILYDKVYDVTNFINEHPGGAFVMMEYLGRDATSAF--AGHSRDAVEMLDDLVLGILPKTER 270 I L EV++H+ S D W I+ ++VYDV+NF++EHPGG V++E G D+T AF GHS DA EM+ D ++G L +T+R Sbjct: 4 IYTLEEVKKHNGSSKDSNSVWTIIDNQVYDVSNFLDEHPGGEEVLIENGGMDSTEAFEDVGHSSDAREMMKDYLIGELSETDR 86
BLAST of cytochrome b5-like vs. SwissProt
Match: gi|1345882|sp|P49098.1|CYB5_TOBAC (RecName: Full=Cytochrome b5) HSP 1 Score: 68.1662 bits (165), Expect = 3.885e-13 Identity = 31/72 (43.06%), Postives = 46/72 (63.89%), Query Frame = 0 Query: 194 IIYLCEVREHDSMDDGWMILYDKVYDVTNFINEHPGGAFVMMEYLGRDATSAF--AGHSRDAVEMLDDLVLG 263 + L EV +H++ D W+++ KVYDVT F+++HPGG V++ G+DAT F GHS A MLD+ +G Sbjct: 7 VFTLAEVSQHNNAKDCWLVISGKVYDVTKFLDDHPGGDEVLLSATGKDATDDFEDVGHSSSARAMLDEYYVG 78
BLAST of cytochrome b5-like vs. SwissProt
Match: gi|12229735|sp|O04354.1|CYB5_BOROF (RecName: Full=Cytochrome b5) HSP 1 Score: 67.781 bits (164), Expect = 4.427e-13 Identity = 33/72 (45.83%), Postives = 45/72 (62.50%), Query Frame = 0 Query: 194 IIYLCEVREHDSMDDGWMILYDKVYDVTNFINEHPGGAFVMMEYLGRDATSAFA--GHSRDAVEMLDDLVLG 263 I L EV +H++ D W+I+ KVYDVT F+ +HPGG V++ G+DAT F GHS A MLD+ +G Sbjct: 4 IFTLAEVAQHNNSKDCWLIINGKVYDVTKFLEDHPGGDDVLLSATGKDATDDFEDIGHSSSAKAMLDEYYVG 75
BLAST of cytochrome b5-like vs. SwissProt
Match: gi|12643974|sp|P04166.2|CYB5B_RAT (RecName: Full=Cytochrome b5 type B; AltName: Full=Cytochrome b5 outer mitochondrial membrane isoform; Flags: Precursor) HSP 1 Score: 67.781 bits (164), Expect = 6.466e-13 Identity = 31/69 (44.93%), Postives = 47/69 (68.12%), Query Frame = 0 Query: 197 LCEVREHDSMDDGWMILYDKVYDVTNFINEHPGGAFVMMEYLGRDATSAF--AGHSRDAVEMLDDLVLG 263 L EV + ++ ++ WM+++ +VYD+T F++EHPGG V++E G DAT +F GHS DA EML +G Sbjct: 25 LEEVAKRNTAEETWMVIHGRVYDITRFLSEHPGGEEVLLEQAGADATESFEDVGHSPDAREMLKQYYIG 93
BLAST of cytochrome b5-like vs. SwissProt
Match: gi|75316008|sp|Q9ZWT2.1|CYB5D_ARATH (RecName: Full=Cytochrome B5 isoform D; Short=AtCb5-D; AltName: Full=Cytochrome b5 isoform B; Short=AtCb5-B) HSP 1 Score: 67.3958 bits (163), Expect = 9.193e-13 Identity = 32/72 (44.44%), Postives = 45/72 (62.50%), Query Frame = 0 Query: 194 IIYLCEVREHDSMDDGWMILYDKVYDVTNFINEHPGGAFVMMEYLGRDATSAF--AGHSRDAVEMLDDLVLG 263 + L EV +H S D W+++ KVYDVT F+++HPGG V++ G+DAT F GHS A MLD+ +G Sbjct: 7 VFTLSEVSQHSSAKDCWIVIDGKVYDVTKFLDDHPGGDEVILTSTGKDATDDFEDVGHSSTAKAMLDEYYVG 78
BLAST of cytochrome b5-like vs. SwissProt
Match: gi|117805|sp|P00168.2|CYB5_ALOSE (RecName: Full=Cytochrome b5) HSP 1 Score: 65.0846 bits (157), Expect = 1.440e-12 Identity = 33/76 (43.42%), Postives = 46/76 (60.53%), Query Frame = 0 Query: 197 LCEVREHDSMDDGWMILYDKVYDVTNFINEHPGGAFVMMEYLGRDATSAF--AGHSRDAVEMLDDLVLGILPKTER 270 L E+++H+ W+IL+ KVYD+T F+ EHPGG V+ E G DAT F GHS DA E+ ++G L +R Sbjct: 10 LEEIQKHNHSKSTWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDATEDFEDVGHSTDARELSKTYIIGELHPDDR 85
BLAST of cytochrome b5-like vs. nr
Match: gi|1199382715|ref|XP_021185944.1| (cytochrome b5-like [Helicoverpa armigera]) HSP 1 Score: 96.6709 bits (239), Expect = 4.661e-21 Identity = 46/97 (47.42%), Postives = 64/97 (65.98%), Query Frame = 0 Query: 183 IIPVDEETNLPIIYLCEVREHDSMDDGWMILYDKVYDVTNFINEHPGGAFVMMEYLGRDATSAF--AGHSRDAVEMLDDLVLGILPKTERSNVYSKP 277 I+P E I L EVR HD+ D W+++YD+VYD+T F +EHPGGA +M EY G DA++AF +GHSR A + L+ ++G LP ER +Y +P Sbjct: 54 IVPGAPEAKDRTITLAEVRMHDTPQDCWVVIYDRVYDITTFFDEHPGGADIMFEYAGHDASTAFRSSGHSRMATKALERFLVGELPMQER--MYRRP 148
BLAST of cytochrome b5-like vs. nr
Match: gi|1036899693|ref|XP_017117173.1| (PREDICTED: cytochrome b5 [Drosophila elegans]) HSP 1 Score: 95.9005 bits (237), Expect = 5.867e-21 Identity = 43/78 (55.13%), Postives = 60/78 (76.92%), Query Frame = 0 Query: 191 NLPIIYLCEVREHDSMDDGWMILYDKVYDVTNFINEHPGGAFVMMEYLGRDATSAF--AGHSRDAVEMLDDLVLGILP 266 +LP I L EV +HDS DD W+++YD+VYDVT+F+ +HPGG V+M++ GRDAT AF GHS DA+E++ D ++G LP Sbjct: 40 DLPEIALEEVAQHDSFDDCWVVIYDRVYDVTHFLRDHPGGDDVIMDHAGRDATIAFHGTGHSGDAIELMKDFLIGQLP 117
BLAST of cytochrome b5-like vs. nr
Match: gi|914569912|gb|KOB73428.1| (Cytochrome b5 [Operophtera brumata]) HSP 1 Score: 95.9005 bits (237), Expect = 7.928e-21 Identity = 48/111 (43.24%), Postives = 72/111 (64.86%), Query Frame = 0 Query: 169 SPDSSATNLEGVQDIIPVDEETNLPIIYLCEVREHDSMDDGWMILYDKVYDVTNFINEHPGGAFVMMEYLGRDATSAF--AGHSRDAVEMLDDLVLGILPKTERSNVYSKP 277 +P S T + I+P E I L EV HD+ +D W+++YD+VYD++ F++EHPGGA +M+EY GRDA++AF +GHSR A + L+ ++G LP ER +Y +P Sbjct: 39 NPWSVETKSQWSDRIVPGTPEAKDRTITLAEVAYHDTPNDCWVVIYDRVYDISTFLDEHPGGAEIMLEYAGRDASTAFRGSGHSRMASKALERFLVGELPMPER--MYRRP 147
BLAST of cytochrome b5-like vs. nr
Match: gi|195436722|ref|XP_002066306.1| (cytochrome b5 [Drosophila willistoni] >gi|194162391|gb|EDW77292.1| uncharacterized protein Dwil_GK18221 [Drosophila willistoni]) HSP 1 Score: 95.5153 bits (236), Expect = 8.456e-21 Identity = 43/78 (55.13%), Postives = 56/78 (71.79%), Query Frame = 0 Query: 195 IYLCEVREHDSMDDGWMILYDKVYDVTNFINEHPGGAFVMMEYLGRDATSAF--AGHSRDAVEMLDDLVLGILPKTER 270 I L EV HDS DD W+++YD+VYDVT F+ EHPGG V+M++ GRDAT AF GHS DA+E + D ++G LP +R Sbjct: 46 ITLAEVAHHDSFDDCWIVVYDRVYDVTRFLREHPGGDDVIMDHAGRDATIAFHGTGHSSDAIEQMRDFLIGELPIEQR 123
BLAST of cytochrome b5-like vs. nr
Match: gi|1321306306|ref|XP_023295137.1| (cytochrome b5 [Lucilia cuprina] >gi|906458265|gb|KNC21516.1| hypothetical protein FF38_09044 [Lucilia cuprina]) HSP 1 Score: 95.1301 bits (235), Expect = 8.742e-21 Identity = 43/85 (50.59%), Postives = 61/85 (71.76%), Query Frame = 0 Query: 188 EETNLPIIYLCEVREHDSMDDGWMILYDKVYDVTNFINEHPGGAFVMMEYLGRDATSAF--AGHSRDAVEMLDDLVLGILPKTER 270 ++ LP I L V +HD D W+++YD+VYD+T+F+ HPGGA V+M+Y GRDAT AF GHSRDA+E + D ++G LP+ E+ Sbjct: 35 QKAALPEISLDAVSQHDDYCDCWVVIYDRVYDLTSFLQNHPGGADVIMDYAGRDATLAFHGTGHSRDAIEQMRDYLIGELPEHEK 119 The following BLAST results are available for this feature:
BLAST of cytochrome b5-like vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 1
BLAST of cytochrome b5-like vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
Pagesback to top
BLAST of cytochrome b5-like vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold488_size158317:121001..122235+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold488_size158317-snap-gene-0.23 ID=maker-scaffold488_size158317-snap-gene-0.23|Name=cytochrome b5-like|organism=Tigriopus kingsejongensis|type=gene|length=1235bp|location=Sequence derived from alignment at scaffold488_size158317:121001..122235+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'cytochrome b5-like' has the following synonyms
Add to Basket
|