retinoid x, maker-scaffold48_size466083-snap-gene-1.23 (gene) Tigriopus kingsejongensis

Overview


Name	retinoid x
Unique Name	maker-scaffold48_size466083-snap-gene-1.23
Type	gene
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of retinoid x vs. L. salmonis genes
Match: EMLSAG00000009969 (supercontig:LSalAtl2s:LSalAtl2s651:302705:304416:-1 gene:EMLSAG00000009969 transcript:EMLSAT00000009969 description:"maker-LSalAtl2s651-augustus-gene-2.5")

HSP 1 Score: 68.1662 bits (165), Expect = 1.447e-13
Identity = 39/94 (41.49%), Postives = 54/94 (57.45%), Query Frame = 0

Query:   34 SSSSLSPKRHGNPNPSFPHVKTVCLVCGDEAIRHVHYGGRCCFSCKAFFRRAVNWHSLKIKIFQCRNDQNCHIDIKSRKCCQYCRFKKCLDTGM 127
            SSS  +P      N S    + +C+VCGD++    HYG   C  CK+FF+R V     +   FQCR+ ++C +D   R  CQ+CRFKKCL+ GM
Sbjct:   55 SSSLTAPSPSSGTNSS---TEILCVVCGDKS-SGKHYGQFTCEGCKSFFKRCVR----RSLTFQCRSKKSCPVDQHHRNQCQHCRFKKCLNMGM 140

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BLAST of retinoid x vs. L. salmonis genes
Match: EMLSAG00000005090 (supercontig:LSalAtl2s:LSalAtl2s269:306853:308464:-1 gene:EMLSAG00000005090 transcript:EMLSAT00000005090 description:"augustus_masked-LSalAtl2s269-processed-gene-3.0")

HSP 1 Score: 67.3958 bits (163), Expect = 2.532e-13
Identity = 33/78 (42.31%), Postives = 45/78 (57.69%), Query Frame = 0

Query:   56 VCLVCGDEAIRHVHYGGRCCFSCKAFFRRAVNWHSLKIKIFQCRNDQNCHIDIKSRKCCQYCRFKKCLDTGMNPSWVL 133
            +CLVCGD A  + HY    C  CK FFRR++  +S     + C+ + +C ID+  R+ CQ CR KKC  TGM    V+
Sbjct:  172 LCLVCGDRASGY-HYNALACEGCKGFFRRSITKNS----NYTCKWNGDCEIDMYMRRKCQACRLKKCYATGMRAECVV 244

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BLAST of retinoid x vs. L. salmonis genes
Match: EMLSAG00000012486 (supercontig:LSalAtl2s:LSalAtl2s91:348479:353390:-1 gene:EMLSAG00000012486 transcript:EMLSAT00000012486 description:"maker-LSalAtl2s91-snap-gene-4.8")

HSP 1 Score: 65.0846 bits (157), Expect = 1.630e-12
Identity = 31/71 (43.66%), Postives = 41/71 (57.75%), Query Frame = 0

Query:   57 CLVCGDEAIRHVHYGGRCCFSCKAFFRRAVNWHSLKIKIFQCRNDQNCHIDIKSRKCCQYCRFKKCLDTGM 127
            C+VCGD A    HYG   C  CK FF+R++     K   +QCR +++C +    R  CQYCR +KCL  GM
Sbjct:  220 CVVCGDRASGR-HYGAISCEGCKGFFKRSIR----KQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGM 285

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BLAST of retinoid x vs. L. salmonis genes
Match: EMLSAG00000009941 (supercontig:LSalAtl2s:LSalAtl2s649:484085:485655:-1 gene:EMLSAG00000009941 transcript:EMLSAT00000009941 description:"maker-LSalAtl2s649-snap-gene-4.11")

HSP 1 Score: 64.6994 bits (156), Expect = 1.840e-12
Identity = 39/103 (37.86%), Postives = 51/103 (49.51%), Query Frame = 0

Query:   34 SSSSLSPKRHGNPNPSFPHVK---------TVCLVCGDEAIRHVHYGGRCCFSCKAFFRRAVNWHSLKIKIFQCRNDQNCHIDIKSRKCCQYCRFKKCLDTGM 127
            SS S+SP        S  H K           C+VCGD++    HYG   C  CK+FF+R+V     +   +QCR  +NC +D   R  CQ+CR KKC   GM
Sbjct:   51 SSDSISPAISSGIVASIEHAKPSELSESSDINCVVCGDKS-SGKHYGQFTCEGCKSFFKRSVR----RNLTYQCRGSKNCPVDQHHRNQCQHCRLKKCFKMGM 148

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BLAST of retinoid x vs. L. salmonis genes
Match: EMLSAG00000000733 (supercontig:LSalAtl2s:LSalAtl2s1117:84476:96586:1 gene:EMLSAG00000000733 transcript:EMLSAT00000000733 description:"maker-LSalAtl2s1117-snap-gene-1.23")

HSP 1 Score: 63.1586 bits (152), Expect = 6.471e-12
Identity = 31/71 (43.66%), Postives = 42/71 (59.15%), Query Frame = 0

Query:   57 CLVCGDEAIRHVHYGGRCCFSCKAFFRRAVNWHSLKIKIFQCRNDQNCHIDIKSRKCCQYCRFKKCLDTGM 127
            C VCGD++   VHYG   C  CK FFRR+ +     +  +QC   +NC +D  +R  CQ+CR +KCL  GM
Sbjct:   47 CKVCGDKS-SGVHYGVITCEGCKGFFRRSQS----SVVNYQCPRQKNCIVDRVNRNRCQFCRLQKCLALGM 112

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BLAST of retinoid x vs. L. salmonis genes
Match: EMLSAG00000009940 (supercontig:LSalAtl2s:LSalAtl2s649:353131:422335:-1 gene:EMLSAG00000009940 transcript:EMLSAT00000009940 description:"maker-LSalAtl2s649-augustus-gene-4.7")

HSP 1 Score: 62.7734 bits (151), Expect = 9.197e-12
Identity = 31/71 (43.66%), Postives = 43/71 (60.56%), Query Frame = 0

Query:   57 CLVCGDEAIRHVHYGGRCCFSCKAFFRRAVNWHSLKIKIFQCRNDQNCHIDIKSRKCCQYCRFKKCLDTGM 127
            C+VCGD++    HYG   C  CK+FF+R+V     +   +QCR  ++C ID   R  CQ+CR KKC+  GM
Sbjct:  434 CVVCGDKS-SGKHYGQFTCEGCKSFFKRSVR----RALTYQCRGSRSCPIDQHHRNQCQHCRLKKCIKMGM 499

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BLAST of retinoid x vs. L. salmonis genes
Match: EMLSAG00000008071 (supercontig:LSalAtl2s:LSalAtl2s47:304551:317770:1 gene:EMLSAG00000008071 transcript:EMLSAT00000008071 description:"snap_masked-LSalAtl2s47-processed-gene-3.10")

HSP 1 Score: 62.003 bits (149), Expect = 1.665e-11
Identity = 36/91 (39.56%), Postives = 46/91 (50.55%), Query Frame = 0

Query:   56 VCLVCGDEAIRHVHYGGRCCFSCKAFFRRAVNWHSLKIKIFQCRNDQNCHIDIKSRKCCQYCRFKKCLDTGMNPSWVLSDDEREQRFQKRK 146
             CLVCGD A    HYG   C +CKAFF+R +  +      +       C I+ + RK CQ CRF+KCL  GM    V  D  R  R + R+
Sbjct:  270 TCLVCGDIA-SGFHYGVSSCEACKAFFKRTIQGNIE----YTXPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRR 355

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BLAST of retinoid x vs. L. salmonis genes
Match: EMLSAG00000004451 (supercontig:LSalAtl2s:LSalAtl2s231:945915:949068:1 gene:EMLSAG00000004451 transcript:EMLSAT00000004451 description:"snap_masked-LSalAtl2s231-processed-gene-9.18")

HSP 1 Score: 61.6178 bits (148), Expect = 1.919e-11
Identity = 35/89 (39.33%), Postives = 44/89 (49.44%), Query Frame = 0

Query:   53 VKTVCLVCGDEAIRHVHYGGRCCFSCKAFFRRAVNWHSLKIKIFQCRNDQNCHIDIKSRKCCQYCRFKKCLDTGMNPSWVLSDDEREQR 141
            + + C VCGD+ I   HYG   C SCK FF+R V       K + C     C + I +RK C  CRF KCL+ GM    +  D  R  R
Sbjct:  151 INSPCPVCGDK-ISGFHYGIFSCESCKGFFKRTVQ----NKKNYVCLRGSQCPVTISTRKKCPACRFDKCLNIGMKLEAIREDRTRGGR 234

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BLAST of retinoid x vs. L. salmonis genes
Match: EMLSAG00000005619 (supercontig:LSalAtl2s:LSalAtl2s301:354064:356113:1 gene:EMLSAG00000005619 transcript:EMLSAT00000005619 description:"maker-LSalAtl2s301-augustus-gene-3.7")

HSP 1 Score: 60.077 bits (144), Expect = 6.917e-11
Identity = 29/77 (37.66%), Postives = 42/77 (54.55%), Query Frame = 0

Query:   51 PHVKTVCLVCGDEAIRHVHYGGRCCFSCKAFFRRAVNWHSLKIKIFQCRNDQNCHIDIKSRKCCQYCRFKKCLDTGM 127
            P    +C VC +E     H+G   C  CK+FF R  N  S+   I +C+N+  C +D K+R  C+ CR +KC+  GM
Sbjct:   51 PMQNQLCRVC-EEPAAGFHFGAFTCEGCKSFFGRTCNNQSV---IQECKNNYRCVVDKKNRTACKACRLRKCIMVGM 123

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BLAST of retinoid x vs. L. salmonis genes
Match: EMLSAG00000005620 (supercontig:LSalAtl2s:LSalAtl2s301:514440:538934:1 gene:EMLSAG00000005620 transcript:EMLSAT00000005620 description:"maker-LSalAtl2s301-augustus-gene-5.4")

HSP 1 Score: 57.7658 bits (138), Expect = 1.144e-10
Identity = 31/80 (38.75%), Postives = 44/80 (55.00%), Query Frame = 0

Query:   51 PHVKTVCLVCGDEAIRHVHYGGRCCFSCKAFFRRAVNWHSLKIKIFQCRNDQNCHIDIKSRKCCQYCRFKKCLDTGMNPS 130
            P    +C VC DE     H+G   C  CK+FF R     +L   I +C+N+ +C ID K+R  C+ CR +KCL  GM+ +
Sbjct:   32 PMRNQICRVC-DEPAAGYHFGAFTCEGCKSFFGRTCGKSNLN-SISECKNNYSCVIDKKNRTSCKACRLRKCLRVGMSKA 109

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BLAST of retinoid x vs. SwissProt
Match: gi|10720385|sp|Q20765.2|NHR7_CAEEL (RecName: Full=Nuclear hormone receptor family member nhr-7)

HSP 1 Score: 85.8853 bits (211), Expect = 3.078e-18
Identity = 41/107 (38.32%), Postives = 61/107 (57.01%), Query Frame = 0

Query:   52 HVKTVCLVCGDEAIRHVHYGGRCCFSCKAFFRRAVNWHSLKIKIFQCRNDQNCHIDIKSRKCCQYCRFKKCLDTGMNPSWVLSDDEREQRFQKRKAKQELKQEQLAF 158
            +   +C VCGD   + +HYG   CF CK FFRRAV     K   + CR ++NC +    R  C+YCRF+KCL  GMNP +V  D E+ ++ +   +K++     L++
Sbjct:    4 YTNRICAVCGDTPAK-IHYGVLACFGCKGFFRRAVKDGRNK---YVCRFEKNCEVTKFERNACRYCRFRKCLLVGMNPDYVRPDREKSKKGKTVLSKKKSVSRSLSY 106

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BLAST of retinoid x vs. SwissProt
Match: gi|74902124|sp|Q5I7G2.1|RXR_LYMST (RecName: Full=Retinoic acid receptor RXR; AltName: Full=Retinoid X receptor; Short=LymRXR)

HSP 1 Score: 85.5001 bits (210), Expect = 3.506e-18
Identity = 53/131 (40.46%), Postives = 68/131 (51.91%), Query Frame = 0

Query:   22 HSHGVNSPESEQSSSS---LSPKRHGNPNPSFPH----VKTVCLVCGDEAIRHVHYGGRCCFSCKAFFRRAVNWHSLKIKIFQCRNDQNCHIDIKSRKCCQYCRFKKCLDTGMNPSWVLSDDEREQRFQKR 145
            HS G++SP S   S     LSP    +P+P  PH     K +C +CGD A    HYG   C  CK FF+R V     K   + CR+D+NC ID + R  CQYCR+ KCL  GM    V    E  QR +++
Sbjct:   76 HSPGMHSPTSSMGSPPMLCLSPT-GPSPSPGLPHSSLHTKHICAICGDRA-SGKHYGVYSCEGCKGFFKRTVR----KDLTYACRDDKNCMIDKRQRNRCQYCRYMKCLSMGMKREAV---QEERQRVKEK 197

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BLAST of retinoid x vs. SwissProt
Match: gi|44888978|sp|O02151.3|NHR14_CAEEL (RecName: Full=Nuclear hormone receptor family member nhr-14)

HSP 1 Score: 84.3445 bits (207), Expect = 9.040e-18
Identity = 40/90 (44.44%), Postives = 57/90 (63.33%), Query Frame = 0

Query:   57 CLVCGDEAIRHVHYGGRCCFSCKAFFRRAVNWHSLKIKIFQCRNDQNCHIDIKSRKCCQYCRFKKCLDTGMNPSWVLSDDEREQRFQKRK 146
            C+VCGD+AI   HYG   C  CK FFRR+V W +L+   + CR ++ C+ID   R  C+YCRF+KCL  GM P  + ++ +R    ++RK
Sbjct:   20 CVVCGDKAIGK-HYGAVACNGCKGFFRRSV-WQNLQ---YTCRFNKQCNIDKDHRNACRYCRFQKCLADGMKPEAIQNERDRIGSTKRRK 104

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BLAST of retinoid x vs. SwissProt
Match: gi|6093482|sp|Q18192.2|NHR31_CAEEL (RecName: Full=Nuclear hormone receptor family member nhr-31)

HSP 1 Score: 82.8037 bits (203), Expect = 4.136e-17
Identity = 41/118 (34.75%), Postives = 61/118 (51.69%), Query Frame = 0

Query:   55 TVCLVCGDEAIRHVHYGGRCCFSCKAFFRRAVNWHSLKIKIFQCRNDQNCHIDIKSRKCCQYCRFKKCLDTGMNPSWVLSD-----DEREQRFQKRKAKQELKQEQLAFSGHGLSRRM 167
            +VC VCGD  I  +HYG   C+ CK FFRR +         + CR   NC +D   R  C+YCRF++C+  GM+P  V  D      ++  R +K++  +EL    +   G   SR++
Sbjct:   80 SVCAVCGD-GIAKLHYGVLACYGCKGFFRRTLTGKYR----YACRFSNNCIVDKFQRNSCRYCRFQRCIQAGMDPKAVRPDRDQTGKQKVPRIKKKQIDEELLNHMMRLQGDDWSRKL 192

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BLAST of retinoid x vs. SwissProt
Match: gi|45644987|sp|P33244.2|FTZF1_DROME (RecName: Full=Nuclear hormone receptor FTZ-F1; AltName: Full=FTZ-F1 alpha; AltName: Full=Nuclear receptor subfamily 5 group A member 3)

HSP 1 Score: 82.8037 bits (203), Expect = 4.315e-17
Identity = 48/125 (38.40%), Postives = 69/125 (55.20%), Query Frame = 0

Query:   43 HGNPNPSFPHV-KTVCLVCGDEAIRHVHYGGRCCFSCKAFFRRAVNWHSLKIKIFQCRNDQNCHIDIKSRKCCQYCRFKKCLDTGMNPSWVLSDDEREQR------FQKRKAK--QELKQEQLAF 158
            HG     F H+ + +C VCGD+ +   HYG   C SCK FF+R V       K++ C  +++CHID   RK C YCRF+KCL+ GM    V +D  R  R      +++ +A+  Q ++Q QLA 
Sbjct:  493 HGGEVIDFKHLFEELCPVCGDK-VSGYHYGLLTCESCKGFFKRTVQ----NKKVYTCVAERSCHIDKTQRKRCPYCRFQKCLEVGMKLEAVRADRMRGGRNKFGPMYKRDRARKLQVMRQRQLAL 612

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BLAST of retinoid x vs. SwissProt
Match: gi|52783388|sp|Q7SYN5.1|RXRBA_DANRE (RecName: Full=Retinoic acid receptor RXR-beta-A; AltName: Full=Nuclear receptor subfamily 2 group B member 2-A; AltName: Full=Retinoid X receptor beta-A)

HSP 1 Score: 80.4925 bits (197), Expect = 2.420e-16
Identity = 46/137 (33.58%), Postives = 71/137 (51.82%), Query Frame = 0

Query:   14 LNSLASSTHSHGVNSPESEQSSSSLSPKRHGNPNPSFPHVKTVCLVCGDEAIRHVHYGGRCCFSCKAFFRRAVNWHSLKIKIFQCRNDQNCHIDIKSRKCCQYCRFKKCLDTGMNPSWVLSDDEREQRFQKRKAKQE 150
            +NS  S +  H V+S +  +    L P    +P P     K +C +CGD +    HYG   C  CK FF+R V     K   + CR++++C +D + R  CQYCR++KCL  GM    V   DER++  Q+ + + +
Sbjct:   83 INSTVSMSGLHAVSSSDDVKPPFGLKPLSSHSPGPMVSQ-KRLCAICGDRS-SGKHYGVYSCEGCKGFFKRTVR----KDLSYTCRDNKDCLVDKRQRNRCQYCRYQKCLAMGMKREVV--QDERQRSVQEERQRNK 211

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BLAST of retinoid x vs. SwissProt
Match: gi|44889025|sp|P49867.2|FTZF1_BOMMO (RecName: Full=Nuclear hormone receptor FTZ-F1; AltName: Full=BmFTZ-F1; AltName: Full=Nuclear receptor subfamily 5 group A member 3)

HSP 1 Score: 78.9518 bits (193), Expect = 9.257e-16
Identity = 54/172 (31.40%), Postives = 78/172 (45.35%), Query Frame = 0

Query:    9 LCEADLNSLASSTHSHGVNSPESEQSSSSLSPKRH--GNPNPSFPHVKTVCL-------------VCGDEAIRHVHYGGRCCFSCKAFFRRAVNWHSLKIKIFQCRNDQNCHIDIKSRKCCQYCRFKKCLDTGMNPSWVLSDDEREQR------FQKRKAK--QELKQEQLA 157
            + E  L    SS  +  + +   E   + + P     G P    P   TVC              VCGD+ +   HYG   C SCK FF+R V       K++ C  ++ CHID   RK C +CRF+KCLD GM    V +D  R  R      +++ +A+  Q ++Q Q+A
Sbjct:   26 VTEIPLEFAMSSMETKSIETTNVELKITYVDPTTGTGGEPGAYLPTAGTVCDQTDTKDVIEELCPVCGDK-VSGYHYGLLTCESCKGFFKRTVQ----NKKVYTCVAERACHIDKTQRKRCPFCRFQKCLDVGMKLEAVRADRMRGGRNKFGPMYKRDRARKLQMMRQRQIA 192

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BLAST of retinoid x vs. SwissProt
Match: gi|75017953|sp|Q8T5C6.1|RXR_BIOGL (RecName: Full=Retinoic acid receptor RXR; AltName: Full=RXR-like protein; AltName: Full=Retinoid X receptor; Short=BgRXR)

HSP 1 Score: 77.7962 bits (190), Expect = 1.519e-15
Identity = 54/147 (36.73%), Postives = 70/147 (47.62%), Query Frame = 0

Query:   14 LNSLASST---------HSHGVNSPESEQSSSSL------SPKRHGNPNPSFPHVKTVCLVCGDEAIRHVHYGGRCCFSCKAFFRRAVNWHSLKIKIFQCRNDQNCHIDIKSRKCCQYCRFKKCLDTGMNPSWVLSDDEREQRFQKR 145
            + S+ASST         HS G++SP S   S  +       P        S  H K +C +CGD A    HYG   C  CK FF+R V     K   + CR+D+NC ID + R  CQYCR+ KCL  GM    V    E  QR +++
Sbjct:   59 MPSMASSTQPSPGPQQMHSPGMHSPTSSMGSPPMLCLSPSGPSPSPGLPHSSLHTKHICAICGDRA-SGKHYGVYSCEGCKGFFKRTVR----KDLTYACRDDKNCMIDKRQRNRCQYCRYMKCLSMGMKREAV---QEERQRVKEK 197

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BLAST of retinoid x vs. SwissProt
Match: gi|461984|sp|P34021.1|ECR_DROME (RecName: Full=Ecdysone receptor; AltName: Full=20-hydroxy-ecdysone receptor; Short=20E receptor; AltName: Full=EcRH; AltName: Full=Ecdysteroid receptor; AltName: Full=Nuclear receptor subfamily 1 group H member 1)

HSP 1 Score: 77.411 bits (189), Expect = 2.886e-15
Identity = 44/120 (36.67%), Postives = 67/120 (55.83%), Query Frame = 0

Query:   56 VCLVCGDEAIRHVHYGGRCCFSCKAFFRRAVNWHSLKIKIFQCRNDQNCHIDIKSRKCCQYCRFKKCLDTGMNPSWVLSDDE-REQRFQKRKAKQELKQEQLAFSGHGLSRRMASRSGRE 174
            +CLVCGD A  + HY    C  CK FFRR+V     K  ++ C+  + C +D+  R+ CQ CR KKCL  GM P  V+ +++   +R +K+  K++ K      S HG +  +AS  G++
Sbjct:  263 LCLVCGDRASGY-HYNALTCEGCKGFFRRSVT----KSAVYCCKFGRACEMDMYMRRKCQECRLKKCLAVGMRPECVVPENQCAMKRREKKAQKEKDKMTTSPSSQHGGNGSLASGGGQD 377

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BLAST of retinoid x vs. SwissProt
Match: gi|146328613|sp|O18531.2|ECR_LUCCU (RecName: Full=Ecdysone receptor; AltName: Full=20-hydroxy-ecdysone receptor; Short=20E receptor; AltName: Full=EcRH; AltName: Full=Ecdysteroid receptor; AltName: Full=Nuclear receptor subfamily 1 group H member 1)

HSP 1 Score: 77.411 bits (189), Expect = 3.403e-15
Identity = 42/124 (33.87%), Postives = 66/124 (53.23%), Query Frame = 0

Query:   56 VCLVCGDEAIRHVHYGGRCCFSCKAFFRRAVNWHSLKIKIFQCRNDQNCHIDIKSRKCCQYCRFKKCLDTGMNPSWVLSDDEREQRFQKRKAKQELKQEQLAFSGHGLSRRMASRSGREKQSHP 179
            +CLVCGD A  + HY    C  CK FFRR+V     K  ++ C+    C +D+  R+ CQ CR KKCL  GM P  V+ +++   + +++KA++E  + Q +     + + +      E  SHP
Sbjct:  300 LCLVCGDRASGY-HYNALTCEGCKGFFRRSVT----KNAVYCCKFGHACEMDMYMRRKCQECRLKKCLAVGMRPECVVPENQCAMKRREKKAQKEKDKIQTSVCATEIKKEILDLMTCEPPSHP 418

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BLAST of retinoid x vs. nr
Match: gi|1325280017|ref|XP_023324670.1| (uncharacterized protein LOC111698547 [Eurytemora affinis])

HSP 1 Score: 149.443 bits (376), Expect = 1.904e-38
Identity = 62/98 (63.27%), Postives = 78/98 (79.59%), Query Frame = 0

Query:   54 KTVCLVCGDEAIRHVHYGGRCCFSCKAFFRRAVNWHSLKIKIFQCRNDQNCHIDIKSRKCCQYCRFKKCLDTGMNPSWVLSDDEREQRFQKRKAKQEL 151
            K +C +CGD A+RHVHYGG CCFSCKAFFRRAVNW +   + FQC+ +  C I+IK+RK CQ CRF+KC+ TGMNPSWVLSDD+R++RF+K +   EL
Sbjct:   38 KILCRICGDGAVRHVHYGGHCCFSCKAFFRRAVNWQTKNKRTFQCKFESGCEINIKNRKTCQSCRFQKCITTGMNPSWVLSDDQRKKRFKKYRETGEL 135

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BLAST of retinoid x vs. nr
Match: gi|1325302227|ref|XP_023332665.1| (uncharacterized protein LOC111704608, partial [Eurytemora affinis])

HSP 1 Score: 110.923 bits (276), Expect = 3.202e-24
Identity = 51/94 (54.26%), Postives = 69/94 (73.40%), Query Frame = 0

Query:   57 CLVCGDEAIRHVHYGGRCCFSCKAFFRRAVNWHSLKIKIFQCRNDQNCHIDIKSRKCCQYCRFKKCLDTGMNPSWVLSDDEREQRFQKRKAKQE 150
            C VCGD+AI H+HYGG CC+SCKAFFRRAV   S K K + C+ + +C + + +R+ CQ CRF+KC + GM  +WVLSD++ EQRF K K K++
Sbjct:  874 CNVCGDKAIAHMHYGGICCYSCKAFFRRAV--QSGKDKKYLCKGEGHCPVSVHNRRGCQKCRFEKCQEIGMVSTWVLSDEQCEQRFGKSKLKRK 965

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BLAST of retinoid x vs. nr
Match: gi|1325258266|ref|XP_023325470.1| (uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258271|ref|XP_023325479.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258277|ref|XP_023325484.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258282|ref|XP_023325492.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258289|ref|XP_023325500.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258292|ref|XP_023325508.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258296|ref|XP_023325515.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258300|ref|XP_023325523.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258306|ref|XP_023325531.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258311|ref|XP_023325539.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258315|ref|XP_023325547.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258319|ref|XP_023325554.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258329|ref|XP_023325561.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258334|ref|XP_023325570.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258338|ref|XP_023325578.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258342|ref|XP_023325585.1| uncharacterized protein LOC111699122 [Eurytemora affinis])

HSP 1 Score: 109.768 bits (273), Expect = 6.147e-24
Identity = 43/94 (45.74%), Postives = 67/94 (71.28%), Query Frame = 0

Query:   57 CLVCGDEAIRHVHYGGRCCFSCKAFFRRAVNWHSLKIKIFQCRNDQNCHIDIKSRKCCQYCRFKKCLDTGMNPSWVLSDDEREQRFQKRKAKQE 150
            C +C + A +H+HYG   CFSC+AFFRR++   +     + CR  QNC I++++RK CQ+CR++KCL  GM  +WVLS++ER++RF+K + + E
Sbjct:   41 CKICNEPAAKHIHYGAMTCFSCRAFFRRSIQNKTANS--YTCRRSQNCEINLRTRKNCQFCRYQKCLSVGMKTNWVLSEEERQRRFRKVRERHE 132

[Close]

BLAST of retinoid x vs. nr
Match: gi|657600356|gb|AID52839.1| (nuclear receptor [Tigriopus japonicus])

HSP 1 Score: 108.612 bits (270), Expect = 1.665e-23
Identity = 48/96 (50.00%), Postives = 66/96 (68.75%), Query Frame = 0

Query:   57 CLVCGDEAIRHVHYGGRCCFSCKAFFRRAVN---WHSLKIKIFQCRNDQNCHIDIKSRKCCQYCRFKKCLDTGMNPSWVLSDDEREQRFQKRKAKQ 149
            C VCG+ A RHVHYG   CFSC+AFFRR++    W++     + CR    C I +KSRK CQ CR+++CL  GM P+WVLS++ER +RF+K + K+
Sbjct:   88 CRVCGEPAARHVHYGSVTCFSCRAFFRRSIQNKAWNN-----YSCRRQGQCEIMLKSRKNCQKCRYEECLSAGMKPTWVLSEEERSRRFRKTREKK 178

[Close]

BLAST of retinoid x vs. nr
Match: gi|1253754465|ref|XP_022661244.1| (vitamin D3 receptor B-like isoform X1 [Varroa destructor] >gi|1253754467|ref|XP_022661245.1| vitamin D3 receptor B-like isoform X1 [Varroa destructor] >gi|1253754469|ref|XP_022661246.1| vitamin D3 receptor B-like isoform X1 [Varroa destructor])

HSP 1 Score: 108.612 bits (270), Expect = 1.761e-23
Identity = 69/161 (42.86%), Postives = 88/161 (54.66%), Query Frame = 0

Query:    6 ILDLCEADLNSLASSTHS-HGVNSPESEQSSSSLSPKRHG---NPNPSFPHVKTVCLVCGDEAIRHVHYGGRCCFSCKAFFRRAVNWHSLKIKIFQCRNDQNCHIDIKSRKCCQYCRFKKCLDTGMNPSWVLSDDEREQRFQKRKAKQELKQEQLAFSGHG 162
            ++DL EA L    S   S HG  +P     S++ +P  HG   +P P       VC VCGD A +  H+GG  C SCKAFFRR+V   + K   FQC  +  C I I SRKCCQ+CRF+KC D GM   WV+++ ER Q     K++ E KQ  LA    G
Sbjct:  159 LIDLREAKLLPFRSFPASPHGSRTPSP---STTTAPGHHGGSCSPLPMGKKPAKVCGVCGDRA-KSYHFGGISCDSCKAFFRRSVQNEAYKN--FQCPYEAKCDITIASRKCCQFCRFRKCNDIGMEKGWVMTELERSQLL---KSRLERKQRLLAVKTVG 310

[Close]

BLAST of retinoid x vs. nr
Match: gi|1268053148|ref|XP_022698737.1| (vitamin D3 receptor B-like isoform X1 [Varroa jacobsoni])

HSP 1 Score: 108.612 bits (270), Expect = 1.883e-23
Identity = 69/161 (42.86%), Postives = 88/161 (54.66%), Query Frame = 0

Query:    6 ILDLCEADLNSLASSTHS-HGVNSPESEQSSSSLSPKRHG---NPNPSFPHVKTVCLVCGDEAIRHVHYGGRCCFSCKAFFRRAVNWHSLKIKIFQCRNDQNCHIDIKSRKCCQYCRFKKCLDTGMNPSWVLSDDEREQRFQKRKAKQELKQEQLAFSGHG 162
            ++DL EA L    S   S HG  +P     S++ +P  HG   +P P       VC VCGD A +  H+GG  C SCKAFFRR+V   + K   FQC  +  C I I SRKCCQ+CRF+KC D GM   WV+++ ER Q     K++ E KQ  LA    G
Sbjct:  159 LIDLREAKLLPFRSFPASPHGSRTPSP---STTTAPGHHGGSCSPLPMGKKPAKVCGVCGDRA-KSYHFGGISCDSCKAFFRRSVQNEAYKN--FQCPYEAKCDITIASRKCCQFCRFRKCNDIGMEKGWVMTELERSQLL---KSRLERKQRLLAVKTVG 310

[Close]

BLAST of retinoid x vs. nr
Match: gi|1253754472|ref|XP_022661248.1| (vitamin D3 receptor A-like isoform X2 [Varroa destructor])

HSP 1 Score: 108.227 bits (269), Expect = 2.199e-23
Identity = 69/161 (42.86%), Postives = 88/161 (54.66%), Query Frame = 0

Query:    6 ILDLCEADLNSLASSTHS-HGVNSPESEQSSSSLSPKRHG---NPNPSFPHVKTVCLVCGDEAIRHVHYGGRCCFSCKAFFRRAVNWHSLKIKIFQCRNDQNCHIDIKSRKCCQYCRFKKCLDTGMNPSWVLSDDEREQRFQKRKAKQELKQEQLAFSGHG 162
            ++DL EA L    S   S HG  +P     S++ +P  HG   +P P       VC VCGD A +  H+GG  C SCKAFFRR+V   + K   FQC  +  C I I SRKCCQ+CRF+KC D GM   WV+++ ER Q     K++ E KQ  LA    G
Sbjct:  159 LIDLREAKLLPFRSFPASPHGSRTPSP---STTTAPGHHGGSCSPLPMGKKPAKVCGVCGDRA-KSYHFGGISCDSCKAFFRRSVQNEAYKN--FQCPYEAKCDITIASRKCCQFCRFRKCNDIGMEKGWVMTELERSQLL---KSRLERKQRLLAVKTVG 310

[Close]

BLAST of retinoid x vs. nr
Match: gi|657600344|gb|AID52833.1| (nuclear receptor [Tigriopus japonicus])

HSP 1 Score: 104.375 bits (259), Expect = 4.560e-22
Identity = 46/90 (51.11%), Postives = 63/90 (70.00%), Query Frame = 0

Query:   55 TVCLVCGDEAIRHVHYGGRCCFSCKAFFRRAVNWHSLKIKIFQCRNDQNCHIDIKSRKCCQYCRFKKCLDTGMNPSWVLSDDEREQRFQK 144
            T C +C ++A +H +YGG+ C SC+AFFRRAV   S   +IF C   + C I++K+R+ CQ+CRFKKCL +GM  +WVL D ER +RF K
Sbjct:  190 TKCYICQEKAGKHNYYGGKACPSCRAFFRRAV--QSKYYEIFFCNKGEKCEINLKTRRSCQFCRFKKCLASGMRVAWVLPDGERNRRFNK 277

[Close]

BLAST of retinoid x vs. nr
Match: gi|1325316701|ref|XP_023340074.1| (uncharacterized protein LOC111710243 [Eurytemora affinis])

HSP 1 Score: 102.449 bits (254), Expect = 1.473e-21
Identity = 49/102 (48.04%), Postives = 65/102 (63.73%), Query Frame = 0

Query:   46 PNPSFPHVKTV-CLVCGDEAIRHVHYGGRCCFSCKAFFRRAVNWHSLKIKIFQCRNDQN-CHIDIKSRKCCQYCRFKKCLDTGMNPSWVLSDDEREQRFQKR 145
            P+P   +  T+ C VC D AI H HYGG CC+SCKAFFRR VN    K   ++CRN  N C + + +R+ CQ CR++KC+  GM P  VLSD++  +RF  R
Sbjct:  262 PSPESANKSTIDCPVCKDVAIAHFHYGGMCCYSCKAFFRRVVNTS--KANKYKCRNGSNLCDVSLGNRRSCQACRYRKCVSAGMKPGLVLSDEQCTRRFGPR 361

[Close]

BLAST of retinoid x vs. nr
Match: gi|657600360|gb|AID52841.1| (nuclear receptor [Tigriopus japonicus])

HSP 1 Score: 101.293 bits (251), Expect = 4.407e-21
Identity = 45/93 (48.39%), Postives = 62/93 (66.67%), Query Frame = 0

Query:   57 CLVCGDEAIRHVHYGGRCCFSCKAFFRRAVNWHSLKIKIFQCRNDQNCHIDIKSRKCCQYCRFKKCLDTGMNPSWVLSDDEREQRFQKRKAKQ 149
            C VCGD A  H HYGG  CFSC+AFFRR+V     K   + C +  NC +   +RK CQ CRF KC++ GM  SWVLSD+E+ +R +K+++++
Sbjct:  122 CHVCGDRAPNHCHYGGIACFSCRAFFRRSVP----KYDTYTCSSSSNCVVTPATRKNCQKCRFDKCVEAGMKASWVLSDEEKLERLEKKRSRK 210

The following BLAST results are available for this feature:

BLAST of retinoid x vs. L. salmonis genes
BLAST of retinoid x vs. SwissProt
BLAST of retinoid x vs. nr

BLAST of retinoid x vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 24


Match Name	E-value	Identity	Description
EMLSAG00000009969	1.447e-13	41.49	supercontig:LSalAtl2s:LSalAtl2s651:302705:304416:-...	[more]
EMLSAG00000005090	2.532e-13	42.31	supercontig:LSalAtl2s:LSalAtl2s269:306853:308464:-...	[more]
EMLSAG00000012486	1.630e-12	43.66	supercontig:LSalAtl2s:LSalAtl2s91:348479:353390:-1...	[more]
EMLSAG00000009941	1.840e-12	37.86	supercontig:LSalAtl2s:LSalAtl2s649:484085:485655:-...	[more]
EMLSAG00000000733	6.471e-12	43.66	supercontig:LSalAtl2s:LSalAtl2s1117:84476:96586:1 ...	[more]
EMLSAG00000009940	9.197e-12	43.66	supercontig:LSalAtl2s:LSalAtl2s649:353131:422335:-...	[more]
EMLSAG00000008071	1.665e-11	39.56	supercontig:LSalAtl2s:LSalAtl2s47:304551:317770:1 ...	[more]
EMLSAG00000004451	1.919e-11	39.33	supercontig:LSalAtl2s:LSalAtl2s231:945915:949068:1...	[more]
EMLSAG00000005619	6.917e-11	37.66	supercontig:LSalAtl2s:LSalAtl2s301:354064:356113:1...	[more]
EMLSAG00000005620	1.144e-10	38.75	supercontig:LSalAtl2s:LSalAtl2s301:514440:538934:1...	[more]

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BLAST of retinoid x vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|10720385\|sp\|Q20765.2\|NHR7_CAEEL	3.078e-18	38.32	RecName: Full=Nuclear hormone receptor family memb...	[more]
gi\|74902124\|sp\|Q5I7G2.1\|RXR_LYMST	3.506e-18	40.46	RecName: Full=Retinoic acid receptor RXR; AltName:...	[more]
gi\|44888978\|sp\|O02151.3\|NHR14_CAEEL	9.040e-18	44.44	RecName: Full=Nuclear hormone receptor family memb...	[more]
gi\|6093482\|sp\|Q18192.2\|NHR31_CAEEL	4.136e-17	34.75	RecName: Full=Nuclear hormone receptor family memb...	[more]
gi\|45644987\|sp\|P33244.2\|FTZF1_DROME	4.315e-17	38.40	RecName: Full=Nuclear hormone receptor FTZ-F1; Alt...	[more]
gi\|52783388\|sp\|Q7SYN5.1\|RXRBA_DANRE	2.420e-16	33.58	RecName: Full=Retinoic acid receptor RXR-beta-A; A...	[more]
gi\|44889025\|sp\|P49867.2\|FTZF1_BOMMO	9.257e-16	31.40	RecName: Full=Nuclear hormone receptor FTZ-F1; Alt...	[more]
gi\|75017953\|sp\|Q8T5C6.1\|RXR_BIOGL	1.519e-15	36.73	RecName: Full=Retinoic acid receptor RXR; AltName:...	[more]
gi\|461984\|sp\|P34021.1\|ECR_DROME	2.886e-15	36.67	RecName: Full=Ecdysone receptor; AltName: Full=20-...	[more]
gi\|146328613\|sp\|O18531.2\|ECR_LUCCU	3.403e-15	33.87	RecName: Full=Ecdysone receptor; AltName: Full=20-...	[more]

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BLAST of retinoid x vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|1325280017\|ref\|XP_023324670.1\|	1.904e-38	63.27	uncharacterized protein LOC111698547 [Eurytemora a...	[more]
gi\|1325302227\|ref\|XP_023332665.1\|	3.202e-24	54.26	uncharacterized protein LOC111704608, partial [Eur...	[more]
gi\|1325258266\|ref\|XP_023325470.1\|	6.147e-24	45.74	uncharacterized protein LOC111699122 [Eurytemora a...	[more]
gi\|657600356\|gb\|AID52839.1\|	1.665e-23	50.00	nuclear receptor [Tigriopus japonicus]	[more]
gi\|1253754465\|ref\|XP_022661244.1\|	1.761e-23	42.86	vitamin D3 receptor B-like isoform X1 [Varroa dest...	[more]
gi\|1268053148\|ref\|XP_022698737.1\|	1.883e-23	42.86	vitamin D3 receptor B-like isoform X1 [Varroa jaco...	[more]
gi\|1253754472\|ref\|XP_022661248.1\|	2.199e-23	42.86	vitamin D3 receptor A-like isoform X2 [Varroa dest...	[more]
gi\|657600344\|gb\|AID52833.1\|	4.560e-22	51.11	nuclear receptor [Tigriopus japonicus]	[more]
gi\|1325316701\|ref\|XP_023340074.1\|	1.473e-21	48.04	uncharacterized protein LOC111710243 [Eurytemora a...	[more]
gi\|657600360\|gb\|AID52841.1\|	4.407e-21	48.39	nuclear receptor [Tigriopus japonicus]	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold48_size466083	supercontig	scaffold48_size466083:147482..156331 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides	2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt	2018-04-19
T. kingsejongensis proteins Blastp vs. NR	2018-05-15

Properties


Property Name	Value
Note	F:sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
maker-scaffold48_size466083-snap-gene-1.23-mRNA-1	maker-scaffold48_size466083-snap-gene-1.23-mRNA-1	Tigriopus kingsejongensis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at scaffold48_size466083:147482..156331-

gene from alignment at scaffold48_size466083:147482..156331-

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>maker-scaffold48_size466083-snap-gene-1.23 ID=maker-scaffold48_size466083-snap-gene-1.23|Name=retinoid x|organism=Tigriopus kingsejongensis|type=gene|length=8850bp|location=Sequence derived from alignment at scaffold48_size466083:147482..156331- (Tigriopus kingsejongensis)
AAAAATTATAACGTGTGGATTGTGTAGGCCTAAGGTTGAGGCGAAGTTGC
TCGACCAAAGATGAACGCTGAGTGTGCAGTACATCTAGCGCACATTGGCG
GTGCTTCGAGCATTCTTGAGAAGTGTGTGCTTCACAACAAAGGATAGGCC
AGTGTGTGTGTTGAAGTCGACCATCCCTCTTGCTCAGGCTTGGACGTGTG
TATCAGAATGTGGCACTGGCACCCGAATAGTGTTCTTGTGCGCGAGGACA
CCAGCTCCATTCAGTGACTCCCCATTTGGATGGAACCATTTCCCATCCTC
GACTTGTGTGAGGCCGATCTCAACTCGTTGGCGTCCTCTACTCACAGTCA
TGGTGTGAATAGTCCGGAAAGTGAACAATCCTCCTCCAGCCTCTCGCCCA
AAAGACACGGCAATCCCAACCCAAGCTTCCCCCACGTCAAAACCGTGTGC
TTGGTGTGCGGTGATGAGGCCATTCGGCACGTGCACTACGGAGGCCGATG
CTGCTTCTCCTGCAAAGCCTTCTTCCGCCGAGCTGTGAATTGGCATAGCT
TGAAAATCAAAATATTTCAGTGTCGCAACGATCAGAATTGCCACATTGAC
ATCAAGTCGCGGAAGTGTTGCCAGTACTGCAGATTCAAGGTGGGTATTCA
AATGTTCCACAAGCCCATATGCAAGGGCTCACAAGTGCACTGAGAGGCTT
GACTCAATCAGGTGCCATCGCTGCCTTGGACCAGGTCGGCCTTGAAATTT
GCGGTAATTAGATGTGAGCACATACGACCAAGTTATATGTGCATACAGGT
TTTGCGGGACCAGATCTATGCAGGGCCACGGAATAACATGATCTCTACTC
GTGCTGCCCTTGACAATGAAACCCGTCCCATTCGGACCTCTTCGGCCTCC
GGCTTGGGAGCAGATCAAAGTACGCGATCGACGCCCAAGTCGCTCCGTGC
CTCGAAGACCTGCTTCCAAGACCACGAGATCAATCGGGTTTAGATTGTTC
CAAATCGAATAAGTTGCCACTCAACTGGCTTTTTCGTACCGCACACATTC
AATTGTGTTTCGAGTAACACCAAAGCAACGCTTGGAAGGGTGAACCATGA
GCGCCGCTTTCCCCAGGGTTGAGCTAACTTGTAGACGTTGCTGAAGGGGA
TTCACGATCTAATTTTGGACCGTGCTTTCAGCCAGCACTTAGAGGTCAGG
TAAATGCTTTGTGACAGAGGATCTTCTCTTTGTTCCAATGACCACACATG
TGGGGTCGGACCAAAAGGTGTAAATAAAACACTCCTTCAGGGACACTTCC
CCAAGGGCCCCTTACGCAACCTAACCCTAATGGATTTTGTTATGGTCCGT
GTCACAGAGGTTCCAGTAGATCTTTCATTTAGACACTCTTTAAGAGACAT
TCTAGGGAGCCTACCAGGGAGGCGACATCCGAAATTAAAGCGAATTTGTG
TTTGGGGACAAGAAACTAACCACACTGAAGCAGAACCGTTTCAGCATCTA
GGTACCATTAGAGAGACTAACAGAAAGGCGACATCCCTCAATTAACATTT
TTAGCAAGAGCCTTAAAATTAGAGCGGAAGTATTATTTCTCCCCCCAAAA
CCTTAACCTCGCTGTAATTGAATCCCTTCAGCCCCTTCTAGCGGCGACGT
ACTGTTTCCAAGTTGATTTCCTCTCTAGCATTTTCTAGTTAATTGAGGGC
TGTCGCCTCTCTGCTAGTCTCTCTAGCTAGCACTGATCTACTACTTCCGT
TTCAGGCCCATCTAGTGGTGATCTGCTATTTCCATACTGCCTACATACAA
GGAGGTGGCTGCGCCTCAGCGAGGTTAGGTTTGCGTCCCCTTAAACATTT
CCTTTTGATTTTACGCTCTTTACTAATTGATGGACGTCGCCTCTTTGTTA
GGCTCTCTAGGACAGGATAATATTCCAGATCTAGTGTTCAGATGAGGCAT
ATTCACAAACTGTACGCTGACAGTGGTACCAAGTGCCTGGGCTATTCTCT
TAGAGCTGCCAATCATTTTAGCATGGGGCTGGTTTGGCAGAACGATGGCT
TTGCATCAAGCCAAATGGTGTGTCGTGATTTTGGCTCGTGGATATGTAGA
GCAGGTATTTTAGGAGCTGTACCAAGATCTGCAATCATACGGTAGTAGTC
AACATATGCATCATTTAGGGAGCATTGAAACCAAAGACCGACGTTGTTTT
TGCGTATTGAAGGGTGCAATTCACCTGTGAAGTTGGCCAAGTTTGGTGCA
TACCAACCTGTGCACACACCTGAAGTGAGACCAGTGCTTCAGTTTTGGCA
CTGAGGGAGCCCACTAATCGCATCTGTATGCTAGACTCTTAGAATATATG
TATAAACCTAAACATGGAAGTAGTGAGCCTGAGCAAGTGCTACAGTTGCA
AGCAAGCGTATCAAACCCGAAAGACAACTCAATCTCGTTCCATCATTGAG
ATTACATGCTACATTCCGAATCCACTAAATGGGTCTGACGAGAGATTCGT
TTTCTCTGTAAAAAAAATAAATATAGTGGGCATTGCGATGTTAGGGTGGC
GTAATTGGACCCGAACAGGCTTCTGACGAGGCTTTTCTATGCTCGAAATT
CGGTATTGGTTCTCGTTAAGAACCGTCACGATGTAGACTGTTTTATACTG
AATGAGCCTCGAGATGAGTGTTTAATCCAGTATTCTCAATACGATGTTAA
GTGTAGGAGGATATTTGTGGCGTCGAAATGAAACTCGTTTGTTATGGGTT
TACCCCGAATTGGACATTTTGCACAAATATAGATTCGCCTATGTAGTACA
AGACTTGCCTAAATGATGCAGTTTACAAAGAATCCAGAATCTACTGTCAT
CTCAACAGAGAGTTGGGCCATAAAAATCGGCCCTTCAAGCAGCTGAACCT
CAACTTCCATGGGCTAAATATTGGCATTGGCTTTCTACCGTACATTCACT
GTTATTAGCTATCCATGGCAAAGCATGAGCTTCTGGAGGACAGAAGGAAG
TAGGAATTTCCCATTCCATAATAATCATCCCTAGAATCAACACATTGCAC
TTTACTCCACAGAGTTGCAGGAAGTCAGATAATGAAAAAAAAGTACATTG
CAGTGCTCACAAATTATCTGCATGGTCTTACCGACAGTAAATAAAGCATT
GGGATTGAAGTTAGTTTAGACCTACGGGTAGATGATCAAAACAAGCGTAA
TTTGCAAAGCTCTCAGTCTTCTTTCTTGCCAATTGAACGCCGCACCAGAA
GCCAGCAATTGACCGAATTTGTCCGAGTGTTTCCAGCACTGTTTGGCCAA
ACAAAAAGCATTGTCCCAATGAATTCACCTGTCTGGTTTACTAGAAATCG
CTAGTTCTGTGAGTGGAGTTAGAATCAAAGATCTCTCTTCATATGTATGA
GTAAAAAACGTATGTAGGGACCCTTTATAAAACATAGACATACAGATATG
GCCAGTCTTTTTCGGATTACTTATATCATCAGGAATCCGGAGCCAGTTGT
TTGAATTACTTAAATTGGACAGCAAATAGTCCAGCTTATCCAAACTCAGT
CAACGCTGACATCATATTAACACACAATCGATGAAGAGGATTCTCAATGA
GCCAATATGTACATTCACCGCGATGATAACCACAATCACCTACAAACAAG
GAAGCAGGCAAACAGCTCAACTGATAAATATAGCCTTATTGAGAGCCGGA
TGGCTTACATTTGAGGTTTGATTATCCACTGGAGCTGAACCAAGTTTGGG
TGCAAATGAGTTGCCCTTAGGGCTGCCATACCGGTACAAGAGAATCGCCA
GCTCGATCTCTAAAGATATACAAAATAACTGCATAAGAATATCCCATGTC
GAAACGATTGGTAGGTTAAGAGCAAGCCTTCTGGATGTTTACAATTATAA
ATCTAGAAAGAAATACGATTTAAGGCTGAAAACGTGATTTTGCAAAAAAA
GACGAACAGTCGATTTTTTTATTTGGAACCCAAAAAACAACATTTTATCC
TAAATATATAAATTACGATGAGGAAAATATATGAAGGAGCGATTAACAAT
GTTGCGTAAAGTCCGAAATCAATAAAATGTAATACATCCATAAATTCTTA
GAAAACAAGTTTTCTGGTTGAGATTTGTTCCATATAACTAAGGACCTAAC
TCACGTATGCCCCAAAAAAAGGATAGTACATTATGTTTTTTTATAAATGG
CTGAAAGAGAGTTCCAGGTCAAAGTCGATATTGGTGTTTTCCATTGGTTC
GAAAATTTGGAGGCCGTAAGTCCAATCCGTCATATTGGACACTTTAGACA
ATATGCAGTAGGTTAGGAACTTTCAAAAAAGAATCAGACATACAGACCAT
TCTCTACATTCTACGACAGACAGGGGTAGATTAAAAATGAGAGCATGCGC
GTCATCAGAAACCTAATTTGCATTTCTTTCTGACTTGGGCACTGTTTTGG
TTTTGACTAGTGTTCCAAAGTTGAGCAGTACGTTATGTAGTAATGTGGAA
TACGTACGTATCCCCAACCTCATAAAAAGCAGGAAAACCGACGTTAATCA
ACTGGTCTCGAATGAGCCATTCCAGCCTTTGGTCTAAAATGCTGGGCCAG
TCTCAAGGCTGAGCTTCATTTACCAAAGGCTTACAAAAAGTTGATCGAGG
TAGCTCACTGCTTGGAAATGGGAATGAGTGAGCTTTGGTCTCGCCAAGTG
GAACTAGTGTACGTAAATGCCATTTGGGCTTTTGGCTTACACATTGGGTC
TCGGTTAAATGAAAATCAAGGGTGCTCCGATTTGGATAAAGCCAGTTTAC
TAACCTTAGATCCAGCTGCTATTACGACATAGTTTCTCCTCAGCTGCTTT
GAGGGGAGATTTGACGAGTCTCTAAAAGGCTGACACAGGCTTTTAACGTT
AAAATTGGACTCAGAGCCCAAAATCGAGAGGGGACGATGAATTTTTTGAT
GCTATTAACAAGTGGTTTACATCAGCAGGGCAATCAAGCCAACCAAGCCA
TACAGCTTAAGTCCGTTACCATACTAATATCAAATAGTATTGTTTTAGTC
GTGTTAGAGGTGTGACTTTTGCATTCTGAAGCTCAGGCGAATAAGTTCAC
CTCCGCTCTAAAATACTATCCCGCTGGTCAAGGTTCGGTTCCCCGCCCAG
CTCACTCTTCAGTGCGCCTGTGTTCATGGTGAGAAATTCTGTGCTCGCAG
GTAATTCATGTATTAGTACCCCTGTTGATCTCGAAAATAGTACTTGTACT
GCAATCTCTTGGGAAATCAAGTGAATAAACTCACAATGCCTTCACATTGG
GTGTGGCATTCCAGTCAATTTTCTCACGATCATGACACCCACAGATTTTT
GGGGAACTTGTTTTTTTGTTCATTGCCTCTTGAACTATAGCACCTCCACC
TTTTTAGTGGGAGAAAGACGCATGGAGATAGCCAGTGAAATGTGCTAAAT
ACGATAACATAAATTGATATTGAATCCATCTGTTGAACAGTTCTTACAAT
TTTGATCCATAAATATTTGTGAAAACATTGTCGGGGAAACTTATGCATTG
CCAAATATGTCTCGCAAAGCACGGGAATGGCTTGGCCAGTGATTAATGAA
ATATTTTTTAATAATACCCCAGAAATGGTTCTCAGCCAGTTTAAGCCGTC
CAATAGTATAGACCTAAAAGCCATCTTCAACGGGAATGAGGCACAAAGGG
CTAAGTTTGTCATGATCTGCCAATGGCGAACCAAGCCTAATTAGGGAGCA
GAACAAACCTACCAATATCGTGTGATTGAACCACTACCATTGGATACGCG
ATTCGAACGCCCAAACTTAGCCCGATCGTCGATGACATGCCGGTGTTATC
GCAAATATATTGTAACCAATTGTTAGTTAGCGCCGACTACGGTTATTCGA
GTGCAAGTGTGATTTTTAGCTTAGGATCTCGTCCATCTGAAGCGTTGCTC
CATGGCGTAGACTGCATTTCTATAGTGCTGATTTACTGAGGTTTGGGCTT
TTAGAGCTGACAGCAAAAATGCTTGTGTCTATTTTTGGTCCAGCAGAAAG
GCTCAATCAGTCTTCTCGCATTGGGTCATCCAAGAGTCGAAAGTTCGATC
CATGAGGTGTGAGAGGTTGGGCTGGCTGAGGTTAATTCAAATTCAAGAGC
GGACACTTGTATATGGTAGGATATCGCAGTGTCCAAGCTTCGAGGGTAAG
ATCAGACTTCACGATACATTTTCATACCAAGCTGGGCCATAAACAAGATA
GCATTGCGTGTATCATGTTTGAGCGACATATCCATCCTGCCATAACAAAT
GAATTTAGGGATACCCATGGAAGGCTGACTCTTGTCGCCATTGAGCATAA
GACGGCTGATTTTTGCCTGTTTGAGTTTCCTGACTAATAATACTCATATC
AAGGATGAACTCAACGAGCCAGAGTCAGGTAAAATCGGGGCACAGGCAGA
TATGGCAAATTTATGATATCTTAGCCAGGTATACCAACGATCAATTCAAA
TGAAACCTGTCCATACTGGTTAATTGACATTAATGCGTATGAAAAACAAA
TCAAATGGTGTTAAGGCTTTGTAATGAAATCAAGAAAATGATTTCAAGTT
TACGAATGAATTCATCAAGCTTGGCTATATTTTGAGCATCATGCATACTT
CACCCACGCACACGCTTGGAAGATGGATATCTGAACCATACAGTTGGTCT
CCCACAATCCAAATACAGGATCCTCTTTCACTGATTCAGAAACAGGACTA
TTTTCACGGTCCAATTTCCTTGTAATATTACGTGAAAAGCAGGTGTTTCT
TGTGATTGGGACAAAGAAGGTTATCCTAGATCCTAGAATATGACAGGCTA
GTACCGTTTTGACTCATTCTATACGTCATTTAACACAGACAAAAATATGC
AAAATTGGCTTGGGTTTACCTGGGGATTTTTACTTTTGGATACAATAGGG
CTTTCAATTTAGGGCTGAATTGGCCTGTTCTGCCGGAATTAGCCTGTATG
CGCTACCCTCTATATCGACAGCCCTAGGTTTGTCTAATGTCGTTGGATGG
CTGGTCGACGTTGAGCGGTTTTAGGGTTGGTCTGTGTCGTAAAGCAAGGG
CGCAGAGTTGGGCGACTTCCTAAATGTCAAGAAGGTGGAAGGTGAGCAAC
CTTCTGTCGAAGCCAATGCGACATTTTGGGAATGCACACAGGTGGGAATA
TTTCTTGGACTGGATCGGCTGAATGCGTCTGCCGTCATTCTAATGTCTGA
ACTTTCCTACCGCTCTGTTTTCTCTATGGTCTCTTCCTCAGAGATCAAAC
AGACAATTTTCTGTTCACTGTTTGGCCAAACCAATTGGGGTGGTGGATTG
GCATCACACACTATGACATGTGCACAGAAAAGCGCTTTCAAGACCGGTTT
TGGGGCAATCGATAAAAAAGACTGATTACTAAATCGTCCATTTTACTGTC
TACGGATGTACAACAACAATGACCTTAGTTGTAACTAGGGCGCTCTAGTT
GTAACCACTAGAAATTCAAGAGTCATATTAAATAGTATGGTAATAGCTCC
AAATGTTGAAGCCAATGCGAAATTTTGCGTACACAGTGGACCGTGCCACT
AGCATAGTAGTTCTTATTAATTGCTTAACCCCTGCCTCCAGTAACACTAC
CCTAGCCAAGTGAAGTACATTGATGTGTCCCTCATTGATCCCTTGTCCTT
GCAGAAATGTCTAGACACGGGGATGAACCCATCTTGGGTCCTCTCGGATG
ATGAGCGTGAGCAGCGATTCCAGAAGAGAAAGGCCAAGCAGGAGCTGAAG
CAAGAGCAGCTGGCCTTCTCGGGCCATGGCCTGTCTAGGCGGATGGCCTC
CAGGTCTGGTCGTGAGAAGCAAAGTCATCCCAAGTTCGAGTCCGACTCAC
TGCCAACATCTGTCTTTTCAAGTACAAACGCTCCTCAAGCAGCCTCGATT
CCGGCCTCTTCAGGGGAATCAACCTCGCACGAGGAGAAAGCTGGGCCTCT
GGAAGGTAAGCGGGCCTTGAACACCGTACTCGTAGTATTGGGCAAGTTGA
GGAGGACCTGGTCGGAAACGTACGCGGACTTCTTAGAAGCCAACCCAATC
CTGAGAAACCCTTCAGCAGTTTTGCCACAGGTTCGATTGGACCAAGTTCT
AACGAGCTCATTTCTCGGAGGATGGAAGCCCCTTACTTATGGCTTAGTTG
CAACTCTTGAGGACTCTGTCCAGCAATCCCAATTGTTCGCATCAGGCTTT
CATCAGAGCATTGAACCATTTAACACTGGGTCCGTCACTCTATCTTGATA
CTACGAGTTGCCATGGATCTCATGGAGCAACCGATGATGAACCACTCAGT
GAGATATTGGGGGATTGGATTGGCTTTTCATTGGGTGAAAAATCTTTAGA
GCACCATTAGAATGAGACCGTTATCTACCAGGGAAAACGGGAAATATAAC
TTCGACATGGATGGGAAAAGAAAAGCGGCATGGTACATTGCTAGCCTTTT
ACTTCAACTAGTGGCTAGAACCGAGCTACAACCAGATTCCAATATTGATC
CAATTATTCAAACATATTTTCAAGTAAAATTGTAGCATGTTCCTATCTTG
CATGTTGAGATTTTTGGGATTCAGCTGGCCGTAGAGGCACAGACCCAATA
GACTCTTCAAAGCGCACAGTAAAGATGAACTTAGTTAGTTTGTTGCACTC
AATAATTGAAGCGGCCTCCTGTAGTGTTGAGATGTCAAACCTACAACTTG
GTTCGTTTCCTAGGTGGAACCAAGCTGATTACATTTTCCATTTTTCGGTG
AAATAGTTATGTCCCGTCTATTAGGTTTGTGTGAGAAGCCATTTGAGTAA

Synonyms

The feature 'retinoid x' has the following synonyms


Synonym
Tk05971

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