orphan nuclear receptor, maker-scaffold491_size156641-snap-gene-0.24 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of orphan nuclear receptor vs. L. salmonis genes
Match: EMLSAG00000000733 (supercontig:LSalAtl2s:LSalAtl2s1117:84476:96586:1 gene:EMLSAG00000000733 transcript:EMLSAT00000000733 description:"maker-LSalAtl2s1117-snap-gene-1.23") HSP 1 Score: 93.5893 bits (231), Expect = 3.461e-20 Identity = 36/70 (51.43%), Postives = 50/70 (71.43%), Query Frame = 0 Query: 191 ESLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGM 260 E + C +C DK++G+HYG+ITCEGCKGFF+R+ + Y C +C +++ RNRCQ+CR QKCL GM Sbjct: 43 EIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPRQKNCIVDRVNRNRCQFCRLQKCLALGM 112
BLAST of orphan nuclear receptor vs. L. salmonis genes
Match: EMLSAG00000009940 (supercontig:LSalAtl2s:LSalAtl2s649:353131:422335:-1 gene:EMLSAG00000009940 transcript:EMLSAT00000009940 description:"maker-LSalAtl2s649-augustus-gene-4.7") HSP 1 Score: 92.4337 bits (228), Expect = 8.765e-20 Identity = 37/84 (44.05%), Postives = 54/84 (64.29%), Query Frame = 0 Query: 191 ESLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGR 274 + + C++C DK++G HYG TCEGCK FFKR+V+ Y C C I++ RN+CQ+CR +KC+ GM AV+ R+P + Sbjct: 430 QDISCVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRALTYQCRGSRSCPIDQHHRNQCQHCRLKKCIKMGMRKEAVQRGRIPASQ 513
BLAST of orphan nuclear receptor vs. L. salmonis genes
Match: EMLSAG00000007894 (supercontig:LSalAtl2s:LSalAtl2s466:351370:353021:1 gene:EMLSAG00000007894 transcript:EMLSAT00000007894 description:"maker-LSalAtl2s466-augustus-gene-2.7") HSP 1 Score: 90.1225 bits (222), Expect = 1.724e-19 Identity = 41/103 (39.81%), Postives = 65/103 (63.11%), Query Frame = 0 Query: 195 CMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVA--DGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYNMYKVKYKKNKNKSS 295 C +C D ++G HYGI C+GC GFFKR+++ R+Y C A +G C ++K RN+C+ CR ++C+ GM AV+ +R G RNS M + +K++ N ++ Sbjct: 34 CKVCTDHSSGKHYGIFACDGCAGFFKRSIRRNRLYVCKAKSEGSCLVDKTHRNQCRACRLKRCVDVGMNKDAVQHER--GPRNSTLRRQM-SLYFKEHSNNNT 133
BLAST of orphan nuclear receptor vs. L. salmonis genes
Match: EMLSAG00000007741 (supercontig:LSalAtl2s:LSalAtl2s450:172104:174744:-1 gene:EMLSAG00000007741 transcript:EMLSAT00000007741 description:"maker-LSalAtl2s450-snap-gene-2.9") HSP 1 Score: 89.7373 bits (221), Expect = 5.124e-19 Identity = 37/81 (45.68%), Postives = 52/81 (64.20%), Query Frame = 0 Query: 195 CMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVAD----GHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMP 271 C +C D+++G HYGI +C+GC GFFKR++ +RIY C A G C I+K RN+C+ CR +KC M AV+ +R P Sbjct: 108 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRQRIYTCKAQGEFKGRCPIDKTHRNQCRACRLKKCFDCSMNKDAVQHERGP 188
BLAST of orphan nuclear receptor vs. L. salmonis genes
Match: EMLSAG00000005090 (supercontig:LSalAtl2s:LSalAtl2s269:306853:308464:-1 gene:EMLSAG00000005090 transcript:EMLSAT00000005090 description:"augustus_masked-LSalAtl2s269-processed-gene-3.0") HSP 1 Score: 87.0409 bits (214), Expect = 2.461e-18 Identity = 33/76 (43.42%), Postives = 47/76 (61.84%), Query Frame = 0 Query: 194 ICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDR 269 +C++C D+A+G HY + CEGCKGFF+R++ Y C +G CEI+ R +CQ CR +KC GM V +R Sbjct: 172 LCLVCGDRASGYHYNALACEGCKGFFRRSITKNSNYTCKWNGDCEIDMYMRRKCQACRLKKCYATGMRAECVVPER 247
BLAST of orphan nuclear receptor vs. L. salmonis genes
Match: EMLSAG00000005619 (supercontig:LSalAtl2s:LSalAtl2s301:354064:356113:1 gene:EMLSAG00000005619 transcript:EMLSAT00000005619 description:"maker-LSalAtl2s301-augustus-gene-3.7") HSP 1 Score: 80.1073 bits (196), Expect = 3.791e-16 Identity = 36/101 (35.64%), Postives = 54/101 (53.47%), Query Frame = 0 Query: 170 PANAKKLTEGTTQEGDDHIEEESLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKR-IYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDR 269 P+ +L + E D ++ + +C +CE+ A G H+G TCEGCK FF RT N+ I C + C ++K R C+ CR +KC+ GM + R R Sbjct: 34 PSIGNQLEQPPKFEAMDPMQNQ--LCRVCEEPAAGFHFGAFTCEGCKSFFGRTCNNQSVIQECKNNYRCVVDKKNRTACKACRLRKCIMVGMSKSGSRYGR 132
BLAST of orphan nuclear receptor vs. L. salmonis genes
Match: EMLSAG00000012651 (supercontig:LSalAtl2s:LSalAtl2s959:3535:5114:-1 gene:EMLSAG00000012651 transcript:EMLSAT00000012651 description:"maker-LSalAtl2s959-snap-gene-0.24") HSP 1 Score: 75.8702 bits (185), Expect = 9.715e-15 Identity = 39/117 (33.33%), Postives = 56/117 (47.86%), Query Frame = 0 Query: 193 LICMICEDKATG-LHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYNMYKVKYKKNKNKSSGKTGGEISTKETH 308 ++C +C DKA +HYG I C C+ FF+R+V Y C D C I R CQ+CR++KCL GM + V + RN +KY + + GK +T E + Sbjct: 89 MVCNVCGDKAPDHIHYGGIACFSCRAFFRRSVPKHTTYFCSTDQACMITITTRKNCQFCRYKKCLESGMKPSWVLSEEEKSSRN--------LIKYVRKNKTTCGKNVNNNNTIEVN 197
BLAST of orphan nuclear receptor vs. L. salmonis genes
Match: EMLSAG00000005620 (supercontig:LSalAtl2s:LSalAtl2s301:514440:538934:1 gene:EMLSAG00000005620 transcript:EMLSAT00000005620 description:"maker-LSalAtl2s301-augustus-gene-5.4") HSP 1 Score: 71.2478 bits (173), Expect = 1.872e-14 Identity = 34/79 (43.04%), Postives = 42/79 (53.16%), Query Frame = 0 Query: 194 ICMICEDKATGLHYGIITCEGCKGFFKRTVQNKR---IYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDR 269 IC +C++ A G H+G TCEGCK FF RT I C + C I+K R C+ CR +KCL GM A R R Sbjct: 37 ICRVCDEPAAGYHFGAFTCEGCKSFFGRTCGKSNLNSISECKNNYSCVIDKKNRTSCKACRLRKCLRVGMSKAGSRYGR 115
BLAST of orphan nuclear receptor vs. L. salmonis genes
Match: EMLSAG00000008261 (supercontig:LSalAtl2s:LSalAtl2s49:858199:860758:1 gene:EMLSAG00000008261 transcript:EMLSAT00000008261 description:"maker-LSalAtl2s49-augustus-gene-8.3") HSP 1 Score: 72.4034 bits (176), Expect = 1.147e-13 Identity = 32/67 (47.76%), Postives = 37/67 (55.22%), Query Frame = 0 Query: 195 CMICEDKATG-LHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGM 260 C IC D A +HYG I C C+ FF+R V Y+C D C I K R CQ+CRF KCL GM Sbjct: 63 CHICSDTANDHIHYGAIACXSCRAFFRRAVICNAEYHCSRDKTCFITKETRKHCQFCRFNKCLEAGM 129
BLAST of orphan nuclear receptor vs. L. salmonis genes
Match: EMLSAG00000010267 (supercontig:LSalAtl2s:LSalAtl2s680:110406:112508:1 gene:EMLSAG00000010267 transcript:EMLSAT00000010267 description:"maker-LSalAtl2s680-augustus-gene-1.19") HSP 1 Score: 67.781 bits (164), Expect = 3.228e-12 Identity = 41/114 (35.96%), Postives = 55/114 (48.25%), Query Frame = 0 Query: 194 ICMICEDKATG-LHYGIITCEGCKGFFKRTVQN---KRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYNMYKVKYKKNKNKSSGKTGGEIS 303 +C IC + A ++YG C C+ FF+R+VQN K+ C C IN R CQ CRFQKC+ GM ++ V DR + S N K + N G T E+S Sbjct: 106 LCQICGEVAGKHVYYGGQCCTSCRAFFRRSVQNNSYKQFICCSQTKDCIINLKTRKACQLCRFQKCVSAGMRVSWVFPDRERRSKKSAMTLNNNKPPL-PSFNDPEGLTSIEVS 218
BLAST of orphan nuclear receptor vs. SwissProt
Match: gi|75025546|sp|Q9U2R6.2|NHR91_CAEEL (RecName: Full=Nuclear hormone receptor family member nhr-91) HSP 1 Score: 248.825 bits (634), Expect = 1.335e-74 Identity = 150/408 (36.76%), Postives = 222/408 (54.41%), Query Frame = 0 Query: 192 SLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYNMYKVKYKKNKNKSSGKTGGEISTKETHQFDMPCQNINILRAALTGNSQISTQYKHLFVNRDAEKNSFDHMQLINNLIVCDDFEDIATLKN--IGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLTTSAYQ-AIHGSTRMGTIRTDGEKAEL-HQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMVE-NSDSTSPSLV-----PIYNRYLKCLRAYATQHHPLEPDRVDKL---LVRLPEVRVAAALLLESKMFYVPFLL 586 S +C +C DK+TGLHYG TCEGCKGFFKR+VQNK++Y+C D CEI+K RNRCQ CRF+KC+ KGM+ AVREDRMPGGRN ++Y+ YK Q +I+R + Q + F + + K +LI L+ D + + LK I N + + ++L +IGD IV +LV+WT+ LPF+ ELPV+ HT LLT +W EL++L+ Y ++ T E E+ NL LQ L+ ++GK I ++ + ++ G +V + T ++ F K+ E YVC+K I ++ ++DST + + + ++K L+ + H P E + L L LP++R A+++LL SKMFYVPFLL Sbjct: 97 SKLCSVCGDKSTGLHYGAATCEGCKGFFKRSVQNKKVYHCSQDNCCEIDKQNRNRCQSCRFRKCISKGMLTEAVREDRMPGGRNGNSIYSNYK------------------------------QRRSIIRKT---KDYVEEQERRPFQSLPSGK------KLIKELVEMDCLDRLINLKGLRINPSANCDIAPACKRLTRIGDEIVEQLVEWTKTLPFFDELPVEAHTHLLTQRWAELVLLSAGYYACSVFTPDSPDTTEMIDETDEISFTNPQVNLRLLQNRLSLVLGKEIPLEHVAKEAGPLVTRFTTLLHSFSNLKVSPEAYVCIKAITLLHLSADSTLDRSIIDKVNTLQDHFVKTLQIHL--HQPGEDAQTTSLAQILDWLPDLRNASSVLLHSKMFYVPFLL 463
BLAST of orphan nuclear receptor vs. SwissProt
Match: gi|68056708|sp|Q9W539.4|HR4_DROME (RecName: Full=Hormone receptor 4; Short=dHR4; AltName: Full=Nuclear receptor subfamily 6 group A member 2) HSP 1 Score: 254.218 bits (648), Expect = 1.062e-71 Identity = 141/310 (45.48%), Postives = 196/310 (63.23%), Query Frame = 0 Query: 316 NINILRAALTGNSQISTQYKHLFVNRDAEKN---SFDH-MQLINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLTTSAYQAIHG-------------------STRMGTIRTDG----------EKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMVENSDSTSPSLVPIYNRYLKCLRAYATQHHPLEPD-RVDKLLVRLPEVRVAAALLLESKMFYVPFLLNSSIV 591 N IL+ ALT S+I L + K+ S++H + +I LI CD EDIATL + E L ++ S++ +KLC IGDSIV+KLV WT++LPFY E+PV++HTKLLT KWHE+L+LTT+AYQA+HG ST GT + + E EV+++L TLQTCLT++MG+PI M+QL+ DVG+MV+K+T++ +FR+ KLKMEEYVCLKV ++ L I RY++ LR+Y P P R+ +LL +PE++ AA+LLLESKMFYVPF+LNS+ + Sbjct: 1213 NGTILKTALTNPSEIVHLRHRLDSAVSSSKDRQISYEHALGMIQTLIDCDAMEDIATLPHFSEFL-EDKSEISEKLCNIGDSIVHKLVSWTKKLPFYLEIPVEIHTKLLTDKWHEILILTTAAYQALHGKRRGEGGGSRHGSPASTPLSTPTGTPLSTPIPSPAQPLHKDDPEFVSEVNSHLSTLQTCLTTLMGQPIAMEQLKLDVGHMVDKMTQITIMFRRIKLKMEEYVCLKVYILLNKEV----ELESIQERYVQVLRSYLQNSSPQNPQARLSELLSHIPEIQAAASLLLESKMFYVPFVLNSASI 1517 HSP 2 Score: 203.756 bits (517), Expect = 1.746e-54 Identity = 93/154 (60.39%), Postives = 107/154 (69.48%), Query Frame = 0 Query: 156 INMEKLWDGDRTQLPAN---AKKLTEGTTQEGDDHI------------------------EEESLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYNM 282 +NME+LW GD +QLP A L+ Q G + +E+ L+CMICEDKATGLHYGIITCEGCKGFFKRTVQN+R+Y CVADG CEI KAQRNRCQYCRF+KC+ +GMVL AVREDRMPGGRNSGAVYN+ Sbjct: 855 LNMERLWAGDYSQLPPGQLQALNLSAQQQQWGSSNSTGLGGVGGGMGGRNLEAPHEPTDEDEQPLVCMICEDKATGLHYGIITCEGCKGFFKRTVQNRRVYTCVADGTCEITKAQRNRCQYCRFKKCIEQGMVLQAVREDRMPGGRNSGAVYNL 1008
BLAST of orphan nuclear receptor vs. SwissProt
Match: gi|148886998|sp|P70033.2|NR6A1_XENLA (RecName: Full=Nuclear receptor subfamily 6 group A member 1; AltName: Full=Germ cell nuclear factor; Short=GCNF; Short=xGCNF) HSP 1 Score: 205.682 bits (522), Expect = 8.101e-59 Identity = 137/448 (30.58%), Postives = 214/448 (47.77%), Query Frame = 0 Query: 185 DDHIEEESLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNS--GAVY--------NMYKVKYKKNKNKSSGKTGGEI------STKETHQFDMPCQNINILRAALTGNSQISTQY------------KHLFVNR------DAEKNSFDHMQ--LINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLT--TSAYQAIHGSTRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMVENSD----STSPSLVPIYNRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVRVAAALLLESKMFYVPFLLNSSI 590 DD +++ + C+IC D+ATGLHYGII+CEGCKGFFKR++ NKR+Y C D +C +++ QRNRCQYCR KCL GM A+RED MPGGRN G V M ++++ N S G + E++Q + L G S + QY HLF A+ S D LIN L+ +D E + T I + S+L LC++ D ++++ + W ++LPF+ +L + +T LL+ W EL++L+ T+ + I G T + + ELH + +D ++E++ + F Q K+ EEYVC+K I + N D S++ + + RY + + +P +P+R L++ LPEVR A L+ + +P L + + Sbjct: 6 DDRVDQRA--CLICGDRATGLHYGIISCEGCKGFFKRSICNKRVYRCSRDKNCVMSRKQRNRCQYCRLLKCLQMGMNRKAIREDGMPGGRNKSIGPVQISDEEVERIMSGQEFEEEANTSWSNNGDSDHSSPGNAVSESNQPSPVSTPSSSRSMELNGFSSLRDQYLGTPGPTHYQYLPHLFSFSAHPTIIPAQSRSLDPQSHTLINQLLTAEDIEPLNTPMLIEDGYKVTQSELFALLCRLADELLFRQITWVKKLPFFCDLSIKDYTCLLSTTWQELILLSSITTYSKQIFGDLTDVTSKYSPSEDELH-------------------------RFSEDGMEVMERLIYLFRKFSQLKVSNEEYVCMKAINFL-NQDIQGISSASQVEQLNKRYWYVCQDFTEYRYPHQPNRFPDLMMCLPEVRYIAGKLVNVPLEQLPLLFKAFL 425
BLAST of orphan nuclear receptor vs. SwissProt
Match: gi|82198466|sp|Q66JK1.1|NR6A1_XENTR (RecName: Full=Nuclear receptor subfamily 6 group A member 1; AltName: Full=Germ cell nuclear factor; Short=GCNF) HSP 1 Score: 202.216 bits (513), Expect = 1.792e-57 Identity = 135/448 (30.13%), Postives = 211/448 (47.10%), Query Frame = 0 Query: 185 DDHIEEESLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNS--GAVY--------NMYKVKYKKNKNKSSGKTGGEI------STKETHQFDMPCQNINILRAALTGNSQISTQY------------KHLFVNR------DAEKNSFDHMQ--LINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLT--TSAYQAIHGSTRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMVENSD----STSPSLVPIYNRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVRVAAALLLESKMFYVPFLLNSSI 590 DD +++ + C+IC D+ATGLHYGII+CEGCKGFFKR++ NKR+Y C D +C +++ QRNRCQYCR KCL GM A+RED MPGGRN G V M ++++ N S G E++Q + L G + QY HLF + S D LIN L+ +D E ++T I + S+L LC++ D ++++ + W ++LPF+ +L + +T LL+ W EL++L+ T+ + I G T + + ELH + +D ++E++ + F Q K+ EEYVC+K I + N D S+ + + RY + + +P +P+R L++ LPEVR A L+ + +P L + + Sbjct: 6 DDRVDQRA--CLICGDRATGLHYGIISCEGCKGFFKRSICNKRVYRCSRDKNCVMSRKQRNRCQYCRLLKCLQMGMNRKAIREDGMPGGRNKSIGPVQISDEEIERIMSGQEFEEEANTSWSNNGDSDHSSPGNGVSESNQPSPVSTPSSSRSMELNGFGSLRDQYLGTPGPMHYQYLPHLFSYSAHPTLIPTQSRSLDPQSHTLINQLLTAEDIEPLSTPMLIEDGYKVTQSELFALLCRLADELLFRQITWVKKLPFFCDLSIKDYTCLLSTTWQELILLSSLTTYSKQIFGDLADVTSKYSPSEDELH-------------------------RFSEDGMEVMERLIYLFRKFSQLKVSNEEYVCMKAINFL-NQDIQGISSVSQVEQLNKRYWYVCQDFTEYRYPHQPNRFPDLMMCLPEVRYIAGKLVNVPLEQLPLLFKAFL 425
BLAST of orphan nuclear receptor vs. SwissProt
Match: gi|150383440|sp|Q9PU65.2|GCNFA_DANRE (RecName: Full=Nuclear receptor subfamily 6 group A member 1-A; AltName: Full=Germ cell nuclear factor A; Short=GCNF-A; Short=zfGCNF) HSP 1 Score: 197.978 bits (502), Expect = 1.502e-55 Identity = 133/450 (29.56%), Postives = 210/450 (46.67%), Query Frame = 0 Query: 181 TQEGDDHIEEESLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRN-----------------SGAVY----NMYKVKYKKNKNK---------SSGKTGGEISTKETHQFDMPCQNINILRAALTGNSQISTQYK---HLFVNRDAEKNSFDHMQ-LINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLTT-SAYQA-IHGSTRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMVENSD----STSPSLVPIYNRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVRVAAALLLESKMFYVPFLLNSSI 590 +E H + E C+IC D+ATGLHYGII+CEGCKGFFKR++ NKR+Y C D +CE+++ QRNRCQYCR KCL GM A+RED MPGGRN SG + NM + + N + S G +ST +++ LR GN+ ++ Y+ HLF ++ + LI L+ +D + T I + +L LC++ D ++++ + W ++LPF+ +L ++ +T+LL+ W EL++L + Y A + G T + ELH +D ++EK+ + F Q K+ EEY C+K I + N D + L + RY + Y +P +P R ++++ LPE+R A L+ + +P L + + Sbjct: 29 AEENGIHDQAEQRSCLICGDRATGLHYGIISCEGCKGFFKRSICNKRVYRCSRDKNCEMSRKQRNRCQYCRLLKCLQMGMNRKAIREDGMPGGRNKSIGPVQISDEEIERIMSGQEFKDEANMPEHTWGNNGDSDHSSPGNGVSDGNQPSPVSTLSSNRSVELNGYTTALREQYIGNA-MAQHYQFLPHLFGYAAQPRSLYPQSHTLIGQLVAAEDLAPLGTPMLIEDGYRVTQVELFALLCRLADELLFRQISWIKKLPFFCDLSIEDYTRLLSATWQELILLACLTVYSAQVLGDLANVTHKYTPSDDELH-------------------------SFSEDGMEVMEKLIYLFRKFHQLKVSNEEYACMKAINFL-NQDIRGLTNVTQLEQLNKRYWYVCQDYTEYKYPHQPKRFPEIMMCLPEIRCIAGKLVNIPLEQLPLLFKAVL 451
BLAST of orphan nuclear receptor vs. SwissProt
Match: gi|12643728|sp|Q15406.2|NR6A1_HUMAN (RecName: Full=Nuclear receptor subfamily 6 group A member 1; AltName: Full=Germ cell nuclear factor; Short=GCNF; Short=hGCNF; AltName: Full=Retinoid receptor-related testis-specific receptor; Short=RTR; Short=hRTR) HSP 1 Score: 191.815 bits (486), Expect = 3.299e-53 Identity = 132/456 (28.95%), Postives = 208/456 (45.61%), Query Frame = 0 Query: 175 KLTEGTTQEGDDHIEEESLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRN-----------------SGAVYNMYKVKYKKNKNKSSGKTGGEISTKETHQFDMPCQNINILRAA-LTGNSQISTQY------------KHLF--------VNRDAEKNSFDHMQLINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLT--TSAYQAIHGSTRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMVENSD----STSPSLVPIYNRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVRVAAALLLESKMFYVPFLL 586 +L GT DD E+ + C+IC D+ATGLHYGII+CEGCKGFFKR++ NKR+Y C D +C +++ QRNRCQYCR KCL GM A+RED MPGGRN SG + + + + G S E++Q P ++ R+ L G QY HLF + + A LI+ L+ +D E + T I + ++L LC++ D ++++ + W ++LPF+ EL + +T LL+ W EL++L+ T + I G T + ELH+ + ++E++ + F Q K+ EEY C+K I + N D +++ L + RY + + + +P+R L++ LPE+R A ++ + +P L Sbjct: 42 ELDPGTISVSDDRAEQRT--CLICGDRATGLHYGIISCEGCKGFFKRSICNKRVYRCSRDKNCVMSRKQRNRCQYCRLLKCLQMGMNRKAIREDGMPGGRNKSIGPVQISEEEIERIMSGQEFEEEANHWSNHGDSDHSSPGNRAS--ESNQ-PSPGSTLSSSRSVELNGFMAFREQYMGMSVPPHYQYIPHLFSYSGHSPLLPQQARSLDPQSYSLIHQLLSAEDLEPLGTPMLIEDGYAVTQAELFALLCRLADELLFRQIAWIKKLPFFCELSIKDYTCLLSSTWQELILLSSLTVYSKQIFGELADVTAKYSPSDEELHRFSDEGM-------------------------EVIERLIYLYHKFHQLKVSNEEYACMKAINFL-NQDIRGLTSASQLEQLNKRYWYICQDFTEYKYTHQPNRFPDLMMCLPEIRYIAGKMVNVPLEQLPLLF 466
BLAST of orphan nuclear receptor vs. SwissProt
Match: gi|82225956|sp|Q4V8R7.1|GCNFB_DANRE (RecName: Full=Nuclear receptor subfamily 6 group A member 1-B; AltName: Full=Germ cell nuclear factor B; Short=GCNF-B) HSP 1 Score: 191.045 bits (484), Expect = 4.583e-53 Identity = 132/436 (30.28%), Postives = 207/436 (47.48%), Query Frame = 0 Query: 183 EGDDHIEEESLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNS--GAVYNMYKVKYKKNKNKSSG---KTGGEISTKETHQFDMPCQNINILRAA------------LTGNSQISTQYKHLFV----NRDAEKNSFDHMQ---LINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLTTSAYQAIHGSTRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMVENSDST----SPSLVPIYNRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVRVAAALLLESKMFYVPFLLNSSI 590 E DD E C+IC D+A+GLHYGII+CEGCKGFFKR++ NKRIY C D +C++++ QRNRCQYCR QKCL GM A+RED MPGGRN G V+ + ++ + SG K G ++S +H + N L + IS Q H F+ S Q L ++ +D + T I + + S+L LC I D ++++ + W +RLPF+ +L + T+LL WH+L++L++ +H + + GE A + + + TLQ + +D ++E + + F Q + EEY CLK I ++ N ++T + L + RY R + HP P R ++ L E+R + ++ + +P L + + Sbjct: 32 ETDDGGER---WCLICGDRASGLHYGIISCEGCKGFFKRSICNKRIYRCNRDKNCQMSRKQRNRCQYCRLQKCLQMGMNRKAIREDGMPGGRNKMIGPVH----ISLEEIERLMSGQEFKEGSDLSDSWSHGYSNHSSPGNSLSEGGQSLSFSSSRSVSCRDECISPQLTHTFLMCKYPLPPPTGSILKTQTHTLTGQILADEDLTPLTTPMLIEDGYSVTQSELLALLCGIADELLFRQIVWLKRLPFFTDLSIKDCTRLLGSSWHQLILLSSI---TVHSAQIL------GELANVTHHYTPSSHTLQ--------------RFGEDAMEVMESLNFLFRKFHQLNISNEEYSCLKTITLL-NQETTGLCNTSMLKQLSERYWTLCRELTERLHPQRPKRFSDIITCLTEIRHTSGKMMSIPLEQLPLLFKAVL 436
BLAST of orphan nuclear receptor vs. SwissProt
Match: gi|160419011|sp|A0P8Z4.2|NR6A1_PIG (RecName: Full=Nuclear receptor subfamily 6 group A member 1; AltName: Full=Germ cell nuclear factor; Short=GCNF) HSP 1 Score: 190.66 bits (483), Expect = 9.936e-53 Identity = 131/458 (28.60%), Postives = 206/458 (44.98%), Query Frame = 0 Query: 175 KLTEGTTQEGDDHIEEESLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRN-----------------SGAVYNMYKVKYKKNKNKSSGKTGGEISTKETHQFDMPCQNINILRAALTGNSQISTQY------------KHLFV-----------NRDAEKNSFDHMQLINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLT--TSAYQAIHGSTRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMVENSD----STSPSLVPIYNRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVRVAAALLLESKMFYVPFLL 586 +L T DD E+ + C+IC D+ATGLHYGII+CEGCKGFFKR++ NKR+Y C D +C +++ QRNRCQYCR KCL GM A+RED MPGGRN SG + + + + G S E++Q P ++ L G QY HLF R + S+ LI+ L+ +D E + T I + ++L LC++ D ++++ + W ++LPF+ EL + +T LL+ W EL++L+ T + I G T + ELH+ + ++E++ + F Q K+ EEY C+K I + N D +++ L + RY + + + +P+R L++ LPE+R A ++ + +P L Sbjct: 42 ELDPSTISVPDDRAEQRT--CLICGDRATGLHYGIISCEGCKGFFKRSICNKRVYRCSRDKNCVMSRKQRNRCQYCRLLKCLQMGMNRKAIREDGMPGGRNKSIGPVQISEEEIERIMSGQEFEEEANHWSNHGDSDHSSPGNRAS--ESNQ-PSPGSTLSSRSVELNGFMAFRDQYMGMSVPPHYQYIPHLFSYSAHSPLLPPQARSLDPQSYS---LIHQLVSAEDLEPLGTPMLIEDGYAVTQAELFALLCRLADELLFRQIAWIKKLPFFCELSIKDYTCLLSSTWQELILLSSLTVYSKQIFGELADVTAKYSPSDEELHRFSDEGM-------------------------EVIERLIYLYHKFHQLKVSNEEYACMKAINFL-NQDIRGLTSASQLEQLNKRYWYICQDFTEYKYTHQPNRFPDLMMCLPEIRYIAGKMVNVPLEQLPLLF 465
BLAST of orphan nuclear receptor vs. SwissProt
Match: gi|10720144|sp|Q64249.1|NR6A1_MOUSE (RecName: Full=Nuclear receptor subfamily 6 group A member 1; AltName: Full=Germ cell nuclear factor; Short=GCNF; Short=mGCNF; AltName: Full=Retinoid receptor-related testis-specific receptor; Short=RTR) HSP 1 Score: 187.963 bits (476), Expect = 1.162e-51 Identity = 130/446 (29.15%), Postives = 204/446 (45.74%), Query Frame = 0 Query: 185 DDHIEEESLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRN-----------------SGAVYNMYKVKYKKNKNKSSGKTGGEISTKETHQFDMPCQNINILRAA-LTGNSQISTQY------------KHLFVNRD------AEKNSFD--HMQLINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLT--TSAYQAIHGSTRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMVENSD----STSPSLVPIYNRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVRVAAALLLESKMFYVPFLL 586 DD E+ + C+IC D+ATGLHYGII+CEGCKGFFKR++ NKR+Y C D +C +++ QRNRCQYCR KCL GM A+RED MPGGRN SG + + + + G S E++Q P ++ R+ L G QY HLF + S D LI+ L+ +D E + T I + ++L LC++ D ++++ + W ++LPF+ EL + +T LL+ W EL++L+ T + I G T + ELH+ + ++E++ + F Q K+ EEY C+K I + N D +++ L + RY + + + +P+R L++ LPE+R A ++ + +P L Sbjct: 67 DDRAEQRT--CLICGDRATGLHYGIISCEGCKGFFKRSICNKRVYRCSRDKNCVMSRKQRNRCQYCRLLKCLQMGMNRKAIREDGMPGGRNKSIGPVQISEEEIERIMSGQEFEEEANHWSNHGDSDHSSPGNRAS--ESNQ-PSPGSTLSSSRSVELNGFMAFRDQYMGMSVPPHYQYIPHLFSYSGHSPLLPPQARSLDPQSYSLIHQLMSAEDLEPLGTPMLIEDGYAVTQAELFALLCRLADELLFRQIAWIKKLPFFCELSIKDYTCLLSSTWQELILLSSLTVYSKQIFGELADVTAKYSPSDEELHRFSDEGM-------------------------EVIERLIYLYHKFHQLKVSNEEYACMKAINFL-NQDIRGLTSASQLEQLNKRYWYICQDFTEYKYTHQPNRFPDLMMCLPEIRYIAGKMVNVPLEQLPLLF 481
BLAST of orphan nuclear receptor vs. SwissProt
Match: gi|55584048|sp|Q05192.3|FTF1B_DROME (RecName: Full=Nuclear hormone receptor FTZ-F1 beta; AltName: Full=Nuclear hormone receptor HR39; Short=dHR39; AltName: Full=Nuclear receptor subfamily 5 group B member 1) HSP 1 Score: 167.548 bits (423), Expect = 9.248e-43 Identity = 124/440 (28.18%), Postives = 194/440 (44.09%), Query Frame = 0 Query: 195 CMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVY-----NMYKVKYKKNKNKSSGKTGGEISTKETHQ----------FDMPCQNINILRAALTGNSQISTQY-----------------------KHLFVNRDAEKNSFD-----------------------HMQLINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLTTSAYQAIH--GSTRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMVENSDSTSPSLVPI---YNRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVR 568 C IC DK +G HYGI +CE CKGFFKRTVQN++ Y CV G C+++ + R +C CRF+KCL KGM L A+REDR GGR++ +M ++ ++ S ++ HQ +PC +L G S S + +HL+ DAE + H QL N L+ A L + GE N DL LC + D +YK+V+W + LP + + +D LL + W ELL+ + +++I G +M + G K L Q S LQTC+ M+ N+ + + R+ ++ EYV +KVI ++++ + V + + L+ L+AY H+P P + +LL+R+P+++ Sbjct: 376 CPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCVRGGPCQVSISTRKKCPACRFEKCLQKGMKLEAIREDRTRGGRSTYQCSYTLPNSMLSPLLSPDQAAAAAAAAAVASQQQPHQRLHQLNGFGGVPIPCSTSLPASPSLAGTSVKSEEMAETGKQSLRTGSVPPLLQEIMDVEHLWQYTDAELARINQPLSAFASGSSSSSSSSGTSSGAHAQLTNPLLAS------AGLSSNGENAN---PDLIAHLCNVADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSC-CFRSIDTPGEIKM----SQGRKITLSQAKSNG---LQTCIERML--------------NLTDHLRRL-------RVDRYEYVAMKVIVLLQSDTTELQEAVKVRECQEKALQSLQAYTLAHYPDTPSKFGELLLRIPDLQ 777
BLAST of orphan nuclear receptor vs. nr
Match: gi|985401230|ref|XP_015368325.1| (PREDICTED: hormone receptor 4-like isoform X2 [Diuraphis noxia] >gi|985401232|ref|XP_015368326.1| PREDICTED: hormone receptor 4-like isoform X2 [Diuraphis noxia] >gi|985401234|ref|XP_015368327.1| PREDICTED: hormone receptor 4-like isoform X2 [Diuraphis noxia]) HSP 1 Score: 523.472 bits (1347), Expect = 1.358e-172 Identity = 274/493 (55.58%), Postives = 335/493 (67.95%), Query Frame = 0 Query: 154 IPINMEKLWDGDRTQLPANAK------KLTEGT-----------------------TQEGDDHIEEESLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYNMYKVKYKKNKNKSSGK----------TGGEISTKETHQFDMPCQ------NINILRAALTGNSQISTQYKHL----FVNRDAEKNSFDHMQLINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLTTSAYQAIHG------STRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMV-ENSDSTSPSLVPIYNRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVRVAAALLLESKMFYVPFLLNSSI 590 +P+NME+LW GD +QLP A LT T +E D+ +E+ ++CMIC+D+ATGLHYGIITCEGCKGFFKRTVQN+RIY C+A+G CEI KAQRNRCQYCRF+KC+ +GMVL AVREDRMPGGRNSGAVYN+YKVKYKK + +G+ T ++T +T D N IL+ ALT S++ + L +RD + + +I NL+ CD+F+DIATL+N+ +LL N SDL KL QIGDSIVYKLVQWT+RLPFY ELPV+VHT+LLTHKWHELLVLTTSAYQAIHG ST M R E +E HQEV NL LQ CL+SMMGKPITMDQLRQDVG MVEKIT V +FR+ KL+MEEYVCLKVI M+ +N+ +T+ L I RY CL+ Y P++P+R+ LL RLPE++ AA+LLLESKMFYVPFLLNS+I Sbjct: 447 VPLNMERLWAGDLSQLPVAATHQMHALNLTANTGPGWPMAGSNNDNKSAPVNAYHQMEEADE--QEQPMVCMICDDRATGLHYGIITCEGCKGFFKRTVQNRRIYTCIAEGTCEITKAQRNRCQYCRFKKCIGQGMVLQAVREDRMPGGRNSGAVYNLYKVKYKKKRPPKNGQVKMEKSVACTTASTMTTIKTENQDNNSSSMSTLVNGTILKTALTNPSEVVYLRQRLDNAVSSSRDRTFSIEATVNMIKNLMDCDEFQDIATLRNMEDLLEHN-SDLSAKLMQIGDSIVYKLVQWTKRLPFYLELPVEVHTRLLTHKWHELLVLTTSAYQAIHGPQKIWNSTNMNGDR--NEDSEFHQEVFQNLCILQNCLSSMMGKPITMDQLRQDVGVMVEKITHVTLMFRRVKLRMEEYVCLKVIIMLTQNNGNTTSELETIQERYTSCLKTYVEHTFPMQPNRLQDLLQRLPEIQSAASLLLESKMFYVPFLLNSTI 934
BLAST of orphan nuclear receptor vs. nr
Match: gi|1101367760|ref|XP_018915169.1| (PREDICTED: hormone receptor 4 isoform X2 [Bemisia tabaci]) HSP 1 Score: 520.005 bits (1338), Expect = 3.801e-171 Identity = 279/481 (58.00%), Postives = 339/481 (70.48%), Query Frame = 0 Query: 155 PINMEKLWDGDRTQLPA-------NAKKLTEGTTQE----------GDDHI--------------------EEESLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYNMYKVKYKKNK-NKSSGKTGGEISTKETHQFDMPCQNIN--ILRAALTGNSQISTQYKHL--FVNRDAEKN-SFDH-MQLINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLTTSAYQAIHGSTRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMVENSDSTSPS-LVPIYNRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVRVAAALLLESKMFYVPFLLNSSI 590 P+NMEKLW GD +QLPA N G GD H +E+ +ICMICEDKATGLHYGIITCEGCKGFFKRTVQN+R+Y CVADG CEI KAQRNRCQYCRF+KC+ +GMVL AVREDRMPGGRNSGAVYN+YKVKYKK+K N +G+ E + + +P +N IL+ ALT S++ + L V+ ++N + D + +I L+ CD+F+DIATL+N+ +LL ++ SDL KL +IGDSIVYKLVQWT+RLPFY ELPV+VHTKLLTHKWHELLVLTTSAYQAIHG+ ++G+ TDG +A+ Q+VS NL TLQTCLTSMMG+PITMDQLRQDVG MVEKIT V +FR+ KL+MEEYVCLKVI M+ S+ S L I RY+ CL+ Y P +P+R LLVRLPEV+ AA+LLL+SKMFYVPFLLNS+I Sbjct: 463 PLNMEKLWAGDLSQLPASQQIQALNLSSYGAGPPSSCWPVPYIKANGDAHAAGHALNPGPVVQKIHEETEEDEQPMICMICEDKATGLHYGIITCEGCKGFFKRTVQNRRVYTCVADGICEITKAQRNRCQYCRFKKCIEQGMVLQAVREDRMPGGRNSGAVYNLYKVKYKKHKKNTRNGQLKLEGKPNKGPEPTIPAHLVNGTILKTALTNPSEVVHLRQRLDNTVSSSRDRNLTLDATLSMIQGLVDCDEFQDIATLQNLDDLL-EHKSDLSDKLMKIGDSIVYKLVQWTKRLPFYLELPVEVHTKLLTHKWHELLVLTTSAYQAIHGAHKLGSTSTDGTEADFTQQVSNNLCTLQTCLTSMMGRPITMDQLRQDVGLMVEKITHVTLMFRRIKLRMEEYVCLKVIIMLNPSNRAGTSELESILERYMSCLKTYVENTAPQQPNRFHDLLVRLPEVQSAASLLLDSKMFYVPFLLNSTI 942
BLAST of orphan nuclear receptor vs. nr
Match: gi|1101367758|ref|XP_018915168.1| (PREDICTED: hormone receptor 4 isoform X1 [Bemisia tabaci]) HSP 1 Score: 519.235 bits (1336), Expect = 8.641e-171 Identity = 279/481 (58.00%), Postives = 339/481 (70.48%), Query Frame = 0 Query: 155 PINMEKLWDGDRTQLPA-------NAKKLTEGTTQE----------GDDHI--------------------EEESLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYNMYKVKYKKNK-NKSSGKTGGEISTKETHQFDMPCQNIN--ILRAALTGNSQISTQYKHL--FVNRDAEKN-SFDH-MQLINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLTTSAYQAIHGSTRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMVENSDSTSPS-LVPIYNRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVRVAAALLLESKMFYVPFLLNSSI 590 P+NMEKLW GD +QLPA N G GD H +E+ +ICMICEDKATGLHYGIITCEGCKGFFKRTVQN+R+Y CVADG CEI KAQRNRCQYCRF+KC+ +GMVL AVREDRMPGGRNSGAVYN+YKVKYKK+K N +G+ E + + +P +N IL+ ALT S++ + L V+ ++N + D + +I L+ CD+F+DIATL+N+ +LL ++ SDL KL +IGDSIVYKLVQWT+RLPFY ELPV+VHTKLLTHKWHELLVLTTSAYQAIHG+ ++G+ TDG +A+ Q+VS NL TLQTCLTSMMG+PITMDQLRQDVG MVEKIT V +FR+ KL+MEEYVCLKVI M+ S+ S L I RY+ CL+ Y P +P+R LLVRLPEV+ AA+LLL+SKMFYVPFLLNS+I Sbjct: 469 PLNMEKLWAGDLSQLPASQQIQALNLSSYGAGPPSSCWPVPYIKANGDAHAAGHALNPGPVVQKIHEETEEDEQPMICMICEDKATGLHYGIITCEGCKGFFKRTVQNRRVYTCVADGICEITKAQRNRCQYCRFKKCIEQGMVLQAVREDRMPGGRNSGAVYNLYKVKYKKHKKNTRNGQLKLEGKPNKGPEPTIPAHLVNGTILKTALTNPSEVVHLRQRLDNTVSSSRDRNLTLDATLSMIQGLVDCDEFQDIATLQNLDDLL-EHKSDLSDKLMKIGDSIVYKLVQWTKRLPFYLELPVEVHTKLLTHKWHELLVLTTSAYQAIHGAHKLGSTSTDGTEADFTQQVSNNLCTLQTCLTSMMGRPITMDQLRQDVGLMVEKITHVTLMFRRIKLRMEEYVCLKVIIMLNPSNRAGTSELESILERYMSCLKTYVENTAPQQPNRFHDLLVRLPEVQSAASLLLDSKMFYVPFLLNSTI 948
BLAST of orphan nuclear receptor vs. nr
Match: gi|641663899|ref|XP_008182814.1| (PREDICTED: hormone receptor 4 isoform X2 [Acyrthosiphon pisum]) HSP 1 Score: 515.768 bits (1327), Expect = 1.660e-169 Identity = 273/491 (55.60%), Postives = 333/491 (67.82%), Query Frame = 0 Query: 154 IPINMEKLWDGDRTQLPANAK------KLTEGTT-------QEGDDH--------------IEEESLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYNMYKVKYKKNKNKSSGKTGGEIST---------------KETHQFDMPCQ-NINILRAALTGNSQISTQYKHL----FVNRDAEKNSFDHMQLINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLTTSAYQAIHG------STRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMV-ENSDSTSPSLVPIYNRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVRVAAALLLESKMFYVPFLLNSSI 590 +P+NME+LW GD +QLP A LT T GD+ +E+ ++CMIC+D+ATGLHYGIITCEGCKGFFKRTVQN+RIY C+A+G CEI KAQRNRCQYCRF+KC+ +GMVL AVREDRMPGGRNSGAVYN+YKVKYKK + +G+ E S ++ + M N IL+ ALT S++ + L +RD + + +I NL+ CD+F+DIATL+N+ +LL N SDL KL QIGDSIVYKLVQWT+RLPFY ELPV+VHT+LLTHKWHELLVLTTSAYQAIHG ST M R E +E HQEV NL LQ CL+SMMGKPITMDQLRQDVG MVEKIT V +FR+ KL+MEEYVCLKVI M+ +N+ +T+ L I RY CL+ Y P++P+R+ LL RLPE++ AA+LLLESKMFYVPFLLNS+I Sbjct: 457 VPLNMERLWAGDLSQLPVAATHQMHALNLTANTGPGWPMAGSNGDNKSAPVNAYHQMEEAEEQEQPMVCMICDDRATGLHYGIITCEGCKGFFKRTVQNRRIYTCIAEGTCEITKAQRNRCQYCRFKKCIGQGMVLQAVREDRMPGGRNSGAVYNLYKVKYKKKRPPKNGQVKMEKSVTCTTASTMTTIKTENQDNNSSSMSTLVNGTILKTALTNPSEVVYLRQRLDNAVSSSRDRTFSIEATVNMIKNLMDCDEFQDIATLRNMEDLLEHN-SDLSAKLMQIGDSIVYKLVQWTKRLPFYLELPVEVHTRLLTHKWHELLVLTTSAYQAIHGPQKIWNSTNMNGDR--NEDSEFHQEVFQNLCILQNCLSSMMGKPITMDQLRQDVGVMVEKITHVTLMFRRLKLRMEEYVCLKVIIMLTQNNGNTTSELETIQERYTSCLKTYVEHTFPMQPNRLQDLLQRLPEIQSAASLLLESKMFYVPFLLNSTI 944
BLAST of orphan nuclear receptor vs. nr
Match: gi|321456767|gb|EFX67867.1| (hypothetical protein DAPPUDRAFT_203579 [Daphnia pulex]) HSP 1 Score: 508.449 bits (1308), Expect = 1.892e-169 Identity = 261/421 (62.00%), Postives = 312/421 (74.11%), Query Frame = 0 Query: 182 QEGDDHIEEESLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYNMYKVKY---KKNKNKS----SGKTGGEISTKETHQFDMPCQNINILRAALTGNSQISTQYKHL----FVNRDAEKNSFD-HMQLINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLTTSAYQAIHGSTRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMVENSDSTSPSLVPIYNRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVRVAAALLLESKMFYVPFLLNSSI 590 QE D E+ +ICMICEDKATGLHYGIITCEGCKGFFKRTVQNKR+Y CVA+G+CEI KAQRNRCQYCRFQKCL +GMVLAAVREDRMPGGRNSGAVYN+YKVKY KKN NKS + T G ++ ++ Q N NIL+ ALT S++ + L +RDA ++ M I LI CD+FEDIATLK + ELL+ ++L KLCQIGDSIVYKLVQWT+RLPFY ELPV+VHT+LLTHKWHELLVLTTSAYQAIHG + + E + Q+VS NLVTLQTCL +MMG+P+T+DQLRQDVG MVE+IT V + ++ +L+MEEYVCLKVIAM+ + L I RY++CL++Y ++P P R LL RLPEV+ AA LLLESKMFYVPFLLNS+I Sbjct: 316 QEDD---EDTPMICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRVYTCVAEGNCEITKAQRNRCQYCRFQKCLAQGMVLAAVREDRMPGGRNSGAVYNLYKVKYRKHKKNNNKSPPGTTANTNGGVTAQQQQQVPR-IANGNILKTALTNPSEVLHLRRRLESAVTSSRDAISMPYETAMPTICTLIYCDEFEDIATLK-LDELLD-TKAELSDKLCQIGDSIVYKLVQWTKRLPFYSELPVEVHTRLLTHKWHELLVLTTSAYQAIHGPRKTWSGPEPTEH-DFVQQVSANLVTLQTCLAAMMGRPLTLDQLRQDVGLMVERITHVTMMLQRSQLRMEEYVCLKVIAMLSQRNV---ELEAIQERYMQCLQSYVEHNYPQSPGRFSDLLTRLPEVQSAATLLLESKMFYVPFLLNSAI 726 The following BLAST results are available for this feature:
BLAST of orphan nuclear receptor vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 25
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BLAST of orphan nuclear receptor vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of orphan nuclear receptor vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
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The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold491_size156641:8337..11777+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold491_size156641-snap-gene-0.24 ID=maker-scaffold491_size156641-snap-gene-0.24|Name=orphan nuclear receptor|organism=Tigriopus kingsejongensis|type=gene|length=3441bp|location=Sequence derived from alignment at scaffold491_size156641:8337..11777+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'orphan nuclear receptor' has the following synonyms
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