orphan nuclear receptor, maker-scaffold491_size156641-snap-gene-0.24 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of orphan nuclear receptor vs. L. salmonis genes
Match: EMLSAG00000011907 (supercontig:LSalAtl2s:LSalAtl2s83:639505:641027:-1 gene:EMLSAG00000011907 transcript:EMLSAT00000011907 description:"maker-LSalAtl2s83-augustus-gene-6.22") HSP 1 Score: 65.855 bits (159), Expect = 1.146e-11 Identity = 41/119 (34.45%), Postives = 55/119 (46.22%), Query Frame = 0 Query: 171 ANAKKLTEGTTQEGDDHI--EEESL--ICMICEDKATG-LHYGIITCEGCKGFFKRTVQN---KRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYN 281 N +L T E I E+L +C IC + A ++YG C C+ FF+R+VQN K+ C C IN R CQ CRFQKC+ GM + V D + S + N Sbjct: 78 VNFNELNSATLSEPSSQIIIRREALPRLCQICGEVAGKHVYYGGQCCTSCRAFFRRSVQNNSYKQFSCCSKTEDCIINLQTRKSCQLCRFQKCISAGMRASWVLPDGERRSKKSAMILN 196
BLAST of orphan nuclear receptor vs. L. salmonis genes
Match: EMLSAG00000004174 (supercontig:LSalAtl2s:LSalAtl2s220:369739:371271:-1 gene:EMLSAG00000004174 transcript:EMLSAT00000004174 description:"augustus_masked-LSalAtl2s220-processed-gene-3.5") HSP 1 Score: 63.1586 bits (152), Expect = 1.057e-10 Identity = 35/87 (40.23%), Postives = 45/87 (51.72%), Query Frame = 0 Query: 194 ICMICEDKATGL-HYGIITCEGCKGFFKRTVQ--NKRIYNCV-----ADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAV--REDRM 270 +C IC D A HYG I C C+ FF RTV + + CV G C I KA R CQ+CR++ CL GM + V E+R+ Sbjct: 136 VCRICGDIAPPHNHYGAIACFSCRAFFGRTVHKGTQERFRCVRGNPDESGQCMITKATRTHCQFCRYRGCLSAGMXPSYVTTAEERL 222
BLAST of orphan nuclear receptor vs. L. salmonis genes
Match: EMLSAG00000003771 (supercontig:LSalAtl2s:LSalAtl2s2039:3647:12796:1 gene:EMLSAG00000003771 transcript:EMLSAT00000003771 description:"maker-LSalAtl2s2039-snap-gene-0.4") HSP 1 Score: 63.1586 bits (152), Expect = 1.249e-10 Identity = 27/57 (47.37%), Postives = 36/57 (63.16%), Query Frame = 0 Query: 216 KGFFKRTVQNKRIYN-CVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMP 271 +GFF+R++Q K Y C + C I + RNRCQYCR +KC+ GM AVR R+P Sbjct: 17 QGFFRRSIQQKIQYRPCTKNQQCNIQRINRNRCQYCRLKKCIASGMSRDAVRFGRVP 73
BLAST of orphan nuclear receptor vs. L. salmonis genes
Match: EMLSAG00000011488 (supercontig:LSalAtl2s:LSalAtl2s794:281844:292908:-1 gene:EMLSAG00000011488 transcript:EMLSAT00000011488 description:"maker-LSalAtl2s794-snap-gene-2.22") HSP 1 Score: 56.9954 bits (136), Expect = 5.153e-9 Identity = 56/230 (24.35%), Postives = 103/230 (44.78%), Query Frame = 0 Query: 229 YNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYNMYKVKYKKNKNKSSGKTGGEISTKETHQFDMPCQ---NINIL-RAALTGN---SQISTQYKHLFVNRDAEK-------NSFDHMQLINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLTTSAYQAIHGSTRM 444 Y C +G+C I+ A+RN+CQ CRF+KCL M AV+++R P A + KNKSS IS++ + + N I+ LT N + ++++ +++ +N + K N+ H + + F T+ LL++N+ L +I +++ +V W + +P + E V+ LL W L +L T+ + + ++ Sbjct: 4 YVCKGNGNCTIDVARRNQCQSCRFKKCLMVKMKKEAVQQERTPRISCIKATQTT-SYTFSNLKNKSSK--ANPISSRRLYLLSTSFRESSNTEIIDDTYLTKNILSTVVNSKKENIVINIENNKKCIETILNAPSHKRTTPSF----QFYPSPTI----TLLSENS------LHEISVKLLFTVVHWAKSVPSFVEFSVNDQNVLLREAWSRLFILGTAQWAILINEEKL 216
BLAST of orphan nuclear receptor vs. L. salmonis genes
Match: EMLSAG00000007233 (supercontig:LSalAtl2s:LSalAtl2s405:178614:197434:1 gene:EMLSAG00000007233 transcript:EMLSAT00000007233 description:"maker-LSalAtl2s405-snap-gene-2.21") HSP 1 Score: 56.225 bits (134), Expect = 1.338e-8 Identity = 28/55 (50.91%), Postives = 35/55 (63.64%), Query Frame = 0 Query: 226 KRIYNCVAD-GHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAV 279 K IY C A G C I+KA RN+CQ CR +KCLH GM AV+ +R P RN+ + Sbjct: 60 KLIYRCQAGTGMCVIDKAHRNQCQACRLRKCLHMGMNKDAVQNERQP--RNTATL 112
BLAST of orphan nuclear receptor vs. SwissProt
Match: gi|52788288|sp|Q90416.2|RXRGA_DANRE (RecName: Full=Retinoic acid receptor RXR-gamma-A; AltName: Full=Nuclear receptor subfamily 2 group B member 3-A; AltName: Full=Retinoic acid receptor RXR-alpha; AltName: Full=Retinoid X receptor alpha; AltName: Full=Retinoid X receptor gamma-A) HSP 1 Score: 150.984 bits (380), Expect = 1.238e-38 Identity = 105/393 (26.72%), Postives = 173/393 (44.02%), Query Frame = 0 Query: 194 ICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYNMYKVKYKKNKNKSSGKTGGEISTKETHQFDMPCQNINILRAALTGNSQISTQYKHLFVNRDAEKNSFDHMQLINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLTTSAYQAIHGSTRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKI-TRVIALFRQCKLKMEEYVCLKVIAMVENSDS---TSPSLV-PIYNRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVRVAAALLLESKMFY 581 IC IC D+++G HYG+ +CEGCKGFFKRT++ Y C + C+I+K QRNRCQYCR+QKCL GM AV+E+ + + ++ E+ + + +MP + I L A L E + +M+ ++ +T+D +CQ D ++ LV+W +R+P + +LP+D LL W+ELL+ + S + + G + G LH S+ VG++ +++ T +++ R ++ E CL+ I + N D+ ++PS V + + L Y ++P +P R KLL+RLP +R LE F+ Sbjct: 116 ICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYTCRDNKDCQIDKRQRNRCQYCRYQKCLAMGMKREAVQEE----------------------RQRGRERSDNEVDSSSSFNEEMPVEKI--LDAELA-----------------VEPKTEAYME---------------------SSMSNSTNDPVTNICQAADKQLFTLVEWAKRIPHFSDLPLDDQVILLRAGWNELLIASFSHRSV---TVKDGILLATG----LHVHRSS--------------------AHSAGVGSIFDRVLTELVSKMRDMQMDKTELGCLRAIVLF-NPDAKGLSNPSEVEALREKVYASLEGYTKHNYPDQPGRFAKLLLRLPALRSIGLKCLEHLFFF 418
BLAST of orphan nuclear receptor vs. SwissProt
Match: gi|52783388|sp|Q7SYN5.1|RXRBA_DANRE (RecName: Full=Retinoic acid receptor RXR-beta-A; AltName: Full=Nuclear receptor subfamily 2 group B member 2-A; AltName: Full=Retinoid X receptor beta-A) HSP 1 Score: 151.369 bits (381), Expect = 1.534e-38 Identity = 110/394 (27.92%), Postives = 179/394 (45.43%), Query Frame = 0 Query: 194 ICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYNMYKVKYKKNKNKSSGKTGGEISTKETHQFDMPCQNINILRAALTGNSQISTQYKHLFVNRDAEKNSFDHMQLINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLTTSAYQAIHGSTRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQL-RQDVGNMVEKI-TRVIALFRQCKLKMEEYVCLKVIAMVENSDS---TSPSLVPIY-NRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVRVAAALLLESKMFY 581 +C IC D+++G HYG+ +CEGCKGFFKRTV+ Y C + C ++K QRNRCQYCR+QKCL GM V+++R V+ ++ +NK + GE+ + +MP + IL A + E L G + +D +CQ D ++ LV+W +R+P + EL +D LL W+ELL+ + S +++I + + G + G LH V + ++ +G + +VG + +++ T +++ R ++ E CL+ I + N D+ +SPS V + + L AY Q +P + R KLL+RLP +R LE F+ Sbjct: 124 LCAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLSYTCRDNKDCLVDKRQRNRCQYCRYQKCLAMGMKREVVQDER------------QRSVQEERQRNK---ERDGEVESSSAANEEMPVE--KILEAEMA-------------------------------------VEQKTELHADGSSGGSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSELSLDDQVILLRAGWNELLIASFS-HRSI--TVKDGILLATG----LH-------VHRNSAHSAGVGAIFDRESAHNAEVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIILF-NPDAKGLSSPSEVELLREKVYASLEAYCKQRYPDQQGRFAKLLLRLPALRSIGLKCLEHLFFF 448
BLAST of orphan nuclear receptor vs. SwissProt
Match: gi|82200328|sp|Q6DHP9.1|RXRGB_DANRE (RecName: Full=Retinoic acid receptor RXR-gamma-B; AltName: Full=Nuclear receptor subfamily 2 group B member 3-B; AltName: Full=Retinoid X receptor gamma-B) HSP 1 Score: 149.058 bits (375), Expect = 6.688e-38 Identity = 106/393 (26.97%), Postives = 163/393 (41.48%), Query Frame = 0 Query: 194 ICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYNMYKVKYKKNKNKSSGKTGGEISTKETHQFDMPCQNINILRAALTGNSQISTQYKHLFVNRDAEKNSFDHMQLINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLTTSAYQAIHGSTRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKI-TRVIALFRQCKLKMEEYVCLKVIAMVENSD----STSPSLVPIYNRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVRVAAALLLESKMFY 581 IC IC D+++G HYG+ +CEGCKGFFKRT++ Y C C I+K QRNRCQYCR+QKCL GM AV+E+R G K+ E+ T DMP I ++++S + K + NS T+D +C D ++ LV+W +R+P + +LP+D LL W+ELL+ + S H S + G +H+ + + VG++ ++ T +++ + ++ E CL+ I + N D S S + + + L Y Q +P +P R KLL+RLP +R LE F+ Sbjct: 127 ICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYTCRDIKECLIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRGKE----------------------KSDTEVETTSRFNEDMPVDKIL--------DAELSVEPKTETYTESSPSNS--------------------------------TNDPVTNICHAADKQLFTLVEWAKRIPHFSDLPLDDQVILLRAGWNELLIASFS-----HRSITVKDGILLGTGLHVHRSSAHS----------------------AGVGSIFNRVLTELVSKMKDMQMDKTELGCLRAIVLF-NPDAKGLSNSLEVEALREKVYASLETYTKQKYPDQPGRFAKLLLRLPALRSIGLKCLEHLFFF 429
BLAST of orphan nuclear receptor vs. SwissProt
Match: gi|167016572|sp|Q0GFF6.2|RXRG_PIG (RecName: Full=Retinoic acid receptor RXR-gamma; AltName: Full=Nuclear receptor subfamily 2 group B member 3; AltName: Full=Retinoid X receptor gamma) HSP 1 Score: 148.673 bits (374), Expect = 9.118e-38 Identity = 109/393 (27.74%), Postives = 174/393 (44.27%), Query Frame = 0 Query: 194 ICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYNMYKVKYKKNKNKSSGKTGGEISTKETHQFDMPCQNINILRAALTGNSQISTQYKHLFVNRDAEKNSFDHMQLINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLTTSAYQAIHGSTRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKI-TRVIALFRQCKLKMEEYVCLKVIAMVENSDS---TSPSLV-PIYNRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVRVAAALLLESKMFY 581 IC IC D+++G HYG+ +CEGCKGFFKRT++ IY C + C I+K QRNRCQYCR+QKCL GM AV+E+R +S + E + DMP + IL A L + + S+ M + N +T+D +C D ++ LV+W +R+P + +L ++ LL W+ELL+ + S ++++ S + G + G LH S+ VG++ +++ T +++ + ++ E CL+ I + N D+ ++PS V + + L AY Q +P +P R KLL+RLP +R LE F+ Sbjct: 138 ICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKDCLIDKRQRNRCQYCRYQKCLVMGMKREAVQEER----------------------QRSRERAESEAECASSGHEDMPVE--RILEAELA---------------VEPKTESYGDMNMEN-----------------------STNDPVTNICHAADKQLFTLVEWAKRIPHFSDLTLEDQVILLRAGWNELLIASFS-HRSV--SVQDGILLATG----LHVHRSS--------------------AHSAGVGSIFDRVLTELVSKMKDMQMDKSELGCLRAIVLF-NPDAKGLSNPSEVETLREKVYATLEAYTKQKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFF 440
BLAST of orphan nuclear receptor vs. SwissProt
Match: gi|75062013|sp|Q5REL6.1|RXRG_PONAB (RecName: Full=Retinoic acid receptor RXR-gamma; AltName: Full=Nuclear receptor subfamily 2 group B member 3; AltName: Full=Retinoid X receptor gamma) HSP 1 Score: 148.673 bits (374), Expect = 1.006e-37 Identity = 109/393 (27.74%), Postives = 174/393 (44.27%), Query Frame = 0 Query: 194 ICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYNMYKVKYKKNKNKSSGKTGGEISTKETHQFDMPCQNINILRAALTGNSQISTQYKHLFVNRDAEKNSFDHMQLINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLTTSAYQAIHGSTRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKI-TRVIALFRQCKLKMEEYVCLKVIAMVENSDS---TSPSLV-PIYNRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVRVAAALLLESKMFY 581 IC IC D+++G HYG+ +CEGCKGFFKRT++ IY C + C I+K QRNRCQYCR+QKCL GM AV+E+R +S + E + DMP + IL A L + + S+ M + N +T+D +C D ++ LV+W +R+P + +L ++ LL W+ELL+ + S ++++ S + G + G LH S+ VG++ +++ T +++ + ++ E CL+ I + N D+ ++PS V + + L AY Q +P +P R KLL+RLP +R LE F+ Sbjct: 138 ICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKDCLIDKRQRNRCQYCRYQKCLVMGMKREAVQEER----------------------QRSRERAESEAECASSGHEDMPVE--RILEAELA---------------VEPKTESYGDMNMEN-----------------------STNDPVTNICHAADKQLFTLVEWAKRIPHFSDLTLEDQVILLRAGWNELLIASFS-HRSV--SVQDGILLATG----LHVHRSS--------------------AHSAGVGSIFDRVLTELVSKMKDMQMDKSELGCLRAIVLF-NPDAKGLSNPSEVETLREKVYATLEAYTKQKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFF 440
BLAST of orphan nuclear receptor vs. nr
Match: gi|657600392|gb|AID52857.1| (hormone receptor 4 [Tigriopus japonicus]) HSP 1 Score: 734.176 bits (1894), Expect = 0.000e+0 Identity = 373/505 (73.86%), Postives = 414/505 (81.98%), Query Frame = 0 Query: 99 HHRLSEQAQ---KISSAVDGMLSLQSANTVARV------SSSGSSMEKVFPVCPRSEGSSYTRGIPINMEKLWDGDRTQLPANAKKLTEGTTQEGDDHIEEESLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYNMYKVKYKKNKNKSSGKT----GGEISTKETHQFDMPCQNINILRAALTGNSQISTQYKHLFVNRDAEKNSFDHMQLINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLTTSAYQAIHGSTRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMVENSDSTSPSLVPIYNRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVRVAAALLLESKMFYVPFLLNSSI 590 HH + Q K+S+AVDG+LSLQS + R S+S +S+ + V P SY RG+PINMEKLW+GD++QLP +E T + E+E LICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVA+G CEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYN+YKVKYKK+K S G++ I+ E QF+ QNINILRAALTGN +IS+ YK + N +++ LIN LI CD+FED+ATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLV+WTRRLPFY ELPVD+HTKLLTHKWHELLVLTTSAYQAIHGS RMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKIT+VIALFRQCKLKMEEYVCLKVIAMV +D+ SPSLV I+NRYL CL+A+A QHHP EP+RV+ LLVRLPEVRVAA LLLESKMFYVPFLLNSSI Sbjct: 160 HHDMGSNEQHALKMSNAVDGLLSLQSGGPLTRFPQEMPQSTSQTSITEEIRVNP----PSYARGLPINMEKLWEGDKSQLPTQTTAKSEETDGKVGLAEEDEPLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVAEGSCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYNLYKVKYKKHKKSSPGRSEMYGSKPINDLEVAQFNSHSQNINILRAALTGNVEISSHYKSILGRCQNHVNDQENINLINELIACDEFEDMATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVEWTRRLPFYKELPVDIHTKLLTHKWHELLVLTTSAYQAIHGSRRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITKVIALFRQCKLKMEEYVCLKVIAMVATADNPSPSLVTIHNRYLACLKAFAQQHHPQEPNRVENLLVRLPEVRVAAGLLLESKMFYVPFLLNSSI 660
BLAST of orphan nuclear receptor vs. nr
Match: gi|242009214|ref|XP_002425386.1| (orphan nuclear receptor nr6a1, putative [Pediculus humanus corporis] >gi|212509180|gb|EEB12648.1| orphan nuclear receptor nr6a1, putative [Pediculus humanus corporis]) HSP 1 Score: 538.11 bits (1385), Expect = 2.508e-180 Identity = 268/468 (57.26%), Postives = 336/468 (71.79%), Query Frame = 0 Query: 155 PINMEKLWDGDRTQLPANAKKLT----------------EGTTQEG----DDHIEEESLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYNMYKVKYKKNKNK------SSGKTGGEISTKETHQFDMPCQNIN--ILRAALTGNSQISTQYKHL----FVNRDAEKNSFDHMQLINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLTTSAYQAIHGSTRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMVENSDSTSPSLVPIYNRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVRVAAALLLESKMFYVPFLLNSSI 590 P+NME+LW GD TQLP + + +G T G D +E+ +ICMICED+ATGLHYGIITCEGCKGFFKRTVQN+R+Y CVADG+CEI KAQRNRCQYCRF+KC+ +GMVL AVREDRMPGGRNSGAVYN+YKV ++ NK ++ + G + + + + +P +N IL+ ALT S++ + L +RD + +I L+ CD+F+DIATL+N+ +LL+ SDL +KLCQIGDSIVYKLVQWT+RLPFY ELPV+VHT+LLTHKWHELLVLTTSAYQAIHG ++ + T G++A+ QEVS NLVTLQTCLTSMMG+PITMDQLRQDVG MVEKIT V +FR+ KL+MEEYVCLKVI M+ S L I +RY+ CL+++ P +P R +LL+RLPE++ AA+LLLESKMFYVPFLLNS+I Sbjct: 310 PLNMERLWAGDLTQLPVSQQNQALNLALPPGDWPRDGRPQGITIIGEPKHDPEDDEQPMICMICEDRATGLHYGIITCEGCKGFFKRTVQNRRVYTCVADGNCEITKAQRNRCQYCRFKKCIEQGMVLQAVREDRMPGGRNSGAVYNLYKVLMRERDNKFLNVIFNNNEKGNQQKSSISSEQTLPSHIVNGTILKTALTNPSEVVHLRQRLDNTVSSSRDRTFPLDTILNMIQALVDCDEFQDIATLRNLEDLLDHK-SDLSEKLCQIGDSIVYKLVQWTKRLPFYLELPVEVHTRLLTHKWHELLVLTTSAYQAIHGVHKLSSTSTAGQEADFTQEVSNNLVTLQTCLTSMMGRPITMDQLRQDVGLMVEKITHVTLMFRRVKLRMEEYVCLKVITMLNQGRGGSNELEAIQDRYMMCLKSFVEHSFPQQPARFHELLLRLPEIQSAASLLLESKMFYVPFLLNSAI 776
BLAST of orphan nuclear receptor vs. nr
Match: gi|1325293207|ref|XP_023330232.1| (hormone receptor 4-like isoform X1 [Eurytemora affinis]) HSP 1 Score: 542.732 bits (1397), Expect = 5.507e-179 Identity = 277/483 (57.35%), Postives = 343/483 (71.01%), Query Frame = 0 Query: 156 INMEKLWDGDRTQLPANAKK----LTEGTTQEGDDHIEEES--LICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYNMYKVKYKKNKNKSSGKTG-------GEISTKETHQFDMP-------------------------------CQNINILRAALTGNSQISTQYKHLFVNRDAEKNSFDHMQLINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLTTSAYQAIHGSTRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMV-ENSDSTSPSLVPIYNRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVRVAAALLLESKMFYVPFLLNSSIVGS 593 ++M +LW G+ QLPA A+ + + G+ ++E+ +ICMIC+DKATGLHYGIITCEGCKGFFKRTVQNKR+Y CVADG+CEINKAQRNRCQYCRFQKCL +GMVLAAVREDRMPGGRNSGAVYNMYKVKYKK K + G + E Q D P +INIL+A LTG+ + QY+ R E+ D ++LI LI CDDFEDI+T +++ +LL+ + ++L +L +IGD+IV KLVQWTRRLPFY ++PV++HT LLT+KWHELLVLTTS+YQAI+GS RMGT R+DGE AELHQEV+TNLVTLQTCLTSMMG+PITMDQLRQDVGNMVEK+T+VI R +L +EEYVCLKV+AM+ E+ L I++RY+ CL+ Y + P +P+RV +LLV+LPEV+ AA LLL SKMFYVPFLLNS+I S Sbjct: 544 VDMAELWKGNLDQLPAQAQPSGSIFNRDSGEPGNRILDEDDQPMICMICDDKATGLHYGIITCEGCKGFFKRTVQNKRVYTCVADGNCEINKAQRNRCQYCRFQKCLERGMVLAAVREDRMPGGRNSGAVYNMYKVKYKKQKKHPKPQMGQFNVMSKPSMKNIEFEQMDSPKSLLNLREEQKTASFQSTSLSSPSSPHPDTISPSINILKAVLTGSQEGLPQYRQFDRARRRERYE-DSLRLIQELIDCDDFEDISTFRDVNDLLDHSNAELSDRLSRIGDNIVVKLVQWTRRLPFYEDIPVNIHTSLLTNKWHELLVLTTSSYQAINGSRRMGTTRSDGETAELHQEVATNLVTLQTCLTSMMGRPITMDQLRQDVGNMVEKVTKVITSLRNFRLTIEEYVCLKVVAMLTEDGLVQHSELEEIHDRYMNCLKIYTEWNFPTQPNRVQELLVKLPEVQEAAGLLLASKMFYVPFLLNSTISSS 1025
BLAST of orphan nuclear receptor vs. nr
Match: gi|1325293212|ref|XP_023330233.1| (hormone receptor 4-like isoform X2 [Eurytemora affinis]) HSP 1 Score: 541.576 bits (1394), Expect = 1.403e-178 Identity = 269/481 (55.93%), Postives = 341/481 (70.89%), Query Frame = 0 Query: 156 INMEKLWDGDRTQLPANAKK----LTEGTTQEGDDHIEEES--LICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYNM----------------YKVKYK--------------------KNKNKSSGKTGGEISTKETHQFDMPCQNINILRAALTGNSQISTQYKHLFVNRDAEKNSFDHMQLINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLTTSAYQAIHGSTRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMV-ENSDSTSPSLVPIYNRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVRVAAALLLESKMFYVPFLLNSSIVGS 593 ++M +LW G+ QLPA A+ + + G+ ++E+ +ICMIC+DKATGLHYGIITCEGCKGFFKRTVQNKR+Y CVADG+CEINKAQRNRCQYCRFQKCL +GMVLAAVREDRMPGGRNSGAVYNM + V K + + K++ +S+ + D +INIL+A LTG+ + QY+ R E+ D ++LI LI CDDFEDI+T +++ +LL+ + ++L +L +IGD+IV KLVQWTRRLPFY ++PV++HT LLT+KWHELLVLTTS+YQAI+GS RMGT R+DGE AELHQEV+TNLVTLQTCLTSMMG+PITMDQLRQDVGNMVEK+T+VI R +L +EEYVCLKV+AM+ E+ L I++RY+ CL+ Y + P +P+RV +LLV+LPEV+ AA LLL SKMFYVPFLLNS+I S Sbjct: 544 VDMAELWKGNLDQLPAQAQPSGSIFNRDSGEPGNRILDEDDQPMICMICDDKATGLHYGIITCEGCKGFFKRTVQNKRVYTCVADGNCEINKAQRNRCQYCRFQKCLERGMVLAAVREDRMPGGRNSGAVYNMYKYKKQKKHPKPQMGQFNVMSKPSMKNIEFEQMDSPKSLLNLREEQKTASFQSTSLSSPSSPHPDTISPSINILKAVLTGSQEGLPQYRQFDRARRRERYE-DSLRLIQELIDCDDFEDISTFRDVNDLLDHSNAELSDRLSRIGDNIVVKLVQWTRRLPFYEDIPVNIHTSLLTNKWHELLVLTTSSYQAINGSRRMGTTRSDGETAELHQEVATNLVTLQTCLTSMMGRPITMDQLRQDVGNMVEKVTKVITSLRNFRLTIEEYVCLKVVAMLTEDGLVQHSELEEIHDRYMNCLKIYTEWNFPTQPNRVQELLVKLPEVQEAAGLLLASKMFYVPFLLNSTISSS 1023
BLAST of orphan nuclear receptor vs. nr
Match: gi|939683917|ref|XP_014286562.1| (PREDICTED: hormone receptor 4 isoform X5 [Halyomorpha halys]) HSP 1 Score: 523.857 bits (1348), Expect = 1.648e-176 Identity = 277/478 (57.95%), Postives = 333/478 (69.67%), Query Frame = 0 Query: 146 EGSSYTRGI--------PINMEKLWDGDRTQLPANAKKLT------------EGTTQEGDDHIEEESLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYNMYKV-------KYKKNKNKSSGKTGGEISTKETHQFDMPCQNIN--ILRAALTGNSQISTQYKHL----FVNRDAEKNSFDHMQLINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLTTSAYQAIHGSTRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMVENSDSTSPSLVPIYNRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVRVAAALLLESKMFYVPFLLNSSI 590 EGSS + G +NME+LW GD +QLP A++LT + QEGD E++ +ICMICEDKATGLHYGIITCEGCKGFFKRTVQN+R+Y CVADG CEI KAQRNRCQYCRF+KC+ +GMVL AVREDRMPGGRNSGAVYN+YKV + + K G + + E MP +N IL+ ALT S++ + L +RD + + +I LI CD+F+DIATL+N+ +LL+ SDL KL QIGDSIVYKLVQWT+RLPFY ELPV+VHTKLLTH WHELLVLTTSAYQAIHG+ R+ + +DG +A QEVS NL TLQTCLTSMMG+PITMDQLRQDVG MVEKIT V +FR+ KL M+EYVCLKVI M+ S + L + RY+ CLR Y P +P+R LL+RLPEV+ AA+LLLESKMFYVPFLLNS+I Sbjct: 168 EGSSISPGAVTGSASGRSLNMERLWAGDLSQLPG-AQQLTALNLSWAKPGLHQDKQQEGDIEEEDQPMICMICEDKATGLHYGIITCEGCKGFFKRTVQNRRVYTCVADGVCEITKAQRNRCQYCRFKKCIEQGMVLQAVREDRMPGGRNSGAVYNLYKVKYKKHKKSVRNGQMKGQADKGKPLISPEPASH-MPPHLVNGTILKTALTNPSEVVHLRQRLDSAVSSSRDRALSVDTTLSVIQTLIDCDEFQDIATLRNLEDLLDHK-SDLSDKLMQIGDSIVYKLVQWTKRLPFYLELPVEVHTKLLTHTWHELLVLTTSAYQAIHGAHRLVSTGSDGTEANFTQEVSNNLCTLQTCLTSMMGRPITMDQLRQDVGLMVEKITYVTLMFRRIKLTMQEYVCLKVIIMLNPSRGDANELEAMQERYMTCLRTYVEHSFPNQPNRFHDLLLRLPEVQSAASLLLESKMFYVPFLLNSTI 642
BLAST of orphan nuclear receptor vs. nr
Match: gi|939683920|ref|XP_014286563.1| (PREDICTED: hormone receptor 4 isoform X6 [Halyomorpha halys]) HSP 1 Score: 523.087 bits (1346), Expect = 2.235e-176 Identity = 277/478 (57.95%), Postives = 333/478 (69.67%), Query Frame = 0 Query: 146 EGSSYTRGI--------PINMEKLWDGDRTQLPANAKKLT------------EGTTQEGDDHIEEESLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYNMYKV-------KYKKNKNKSSGKTGGEISTKETHQFDMPCQNIN--ILRAALTGNSQISTQYKHL----FVNRDAEKNSFDHMQLINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLTTSAYQAIHGSTRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMVENSDSTSPSLVPIYNRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVRVAAALLLESKMFYVPFLLNSSI 590 EGSS + G +NME+LW GD +QLP A++LT + QEGD E++ +ICMICEDKATGLHYGIITCEGCKGFFKRTVQN+R+Y CVADG CEI KAQRNRCQYCRF+KC+ +GMVL AVREDRMPGGRNSGAVYN+YKV + + K G + + E MP +N IL+ ALT S++ + L +RD + + +I LI CD+F+DIATL+N+ +LL+ SDL KL QIGDSIVYKLVQWT+RLPFY ELPV+VHTKLLTH WHELLVLTTSAYQAIHG+ R+ + +DG +A QEVS NL TLQTCLTSMMG+PITMDQLRQDVG MVEKIT V +FR+ KL M+EYVCLKVI M+ S + L + RY+ CLR Y P +P+R LL+RLPEV+ AA+LLLESKMFYVPFLLNS+I Sbjct: 161 EGSSISPGAVTGSASGRSLNMERLWAGDLSQLPG-AQQLTALNLSWAKPGLHQDKQQEGDIEEEDQPMICMICEDKATGLHYGIITCEGCKGFFKRTVQNRRVYTCVADGVCEITKAQRNRCQYCRFKKCIEQGMVLQAVREDRMPGGRNSGAVYNLYKVKYKKHKKSVRNGQMKGQADKGKPLISPEPASH-MPPHLVNGTILKTALTNPSEVVHLRQRLDSAVSSSRDRALSVDTTLSVIQTLIDCDEFQDIATLRNLEDLLDHK-SDLSDKLMQIGDSIVYKLVQWTKRLPFYLELPVEVHTKLLTHTWHELLVLTTSAYQAIHGAHRLVSTGSDGTEANFTQEVSNNLCTLQTCLTSMMGRPITMDQLRQDVGLMVEKITYVTLMFRRIKLTMQEYVCLKVIIMLNPSRGDANELEAMQERYMTCLRTYVEHSFPNQPNRFHDLLLRLPEVQSAASLLLESKMFYVPFLLNSTI 635
BLAST of orphan nuclear receptor vs. nr
Match: gi|939683914|ref|XP_014286561.1| (PREDICTED: hormone receptor 4 isoform X4 [Halyomorpha halys]) HSP 1 Score: 523.472 bits (1347), Expect = 3.363e-176 Identity = 277/478 (57.95%), Postives = 333/478 (69.67%), Query Frame = 0 Query: 146 EGSSYTRGI--------PINMEKLWDGDRTQLPANAKKLT------------EGTTQEGDDHIEEESLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYNMYKV-------KYKKNKNKSSGKTGGEISTKETHQFDMPCQNIN--ILRAALTGNSQISTQYKHL----FVNRDAEKNSFDHMQLINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLTTSAYQAIHGSTRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMVENSDSTSPSLVPIYNRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVRVAAALLLESKMFYVPFLLNSSI 590 EGSS + G +NME+LW GD +QLP A++LT + QEGD E++ +ICMICEDKATGLHYGIITCEGCKGFFKRTVQN+R+Y CVADG CEI KAQRNRCQYCRF+KC+ +GMVL AVREDRMPGGRNSGAVYN+YKV + + K G + + E MP +N IL+ ALT S++ + L +RD + + +I LI CD+F+DIATL+N+ +LL+ SDL KL QIGDSIVYKLVQWT+RLPFY ELPV+VHTKLLTH WHELLVLTTSAYQAIHG+ R+ + +DG +A QEVS NL TLQTCLTSMMG+PITMDQLRQDVG MVEKIT V +FR+ KL M+EYVCLKVI M+ S + L + RY+ CLR Y P +P+R LL+RLPEV+ AA+LLLESKMFYVPFLLNS+I Sbjct: 181 EGSSISPGAVTGSASGRSLNMERLWAGDLSQLPG-AQQLTALNLSWAKPGLHQDKQQEGDIEEEDQPMICMICEDKATGLHYGIITCEGCKGFFKRTVQNRRVYTCVADGVCEITKAQRNRCQYCRFKKCIEQGMVLQAVREDRMPGGRNSGAVYNLYKVKYKKHKKSVRNGQMKGQADKGKPLISPEPASH-MPPHLVNGTILKTALTNPSEVVHLRQRLDSAVSSSRDRALSVDTTLSVIQTLIDCDEFQDIATLRNLEDLLDHK-SDLSDKLMQIGDSIVYKLVQWTKRLPFYLELPVEVHTKLLTHTWHELLVLTTSAYQAIHGAHRLVSTGSDGTEANFTQEVSNNLCTLQTCLTSMMGRPITMDQLRQDVGLMVEKITYVTLMFRRIKLTMQEYVCLKVIIMLNPSRGDANELEAMQERYMTCLRTYVEHSFPNQPNRFHDLLLRLPEVQSAASLLLESKMFYVPFLLNSTI 655
BLAST of orphan nuclear receptor vs. nr
Match: gi|939683912|ref|XP_014286560.1| (PREDICTED: hormone receptor 4 isoform X3 [Halyomorpha halys]) HSP 1 Score: 523.087 bits (1346), Expect = 4.452e-176 Identity = 277/478 (57.95%), Postives = 333/478 (69.67%), Query Frame = 0 Query: 146 EGSSYTRGI--------PINMEKLWDGDRTQLPANAKKLT------------EGTTQEGDDHIEEESLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYNMYKV-------KYKKNKNKSSGKTGGEISTKETHQFDMPCQNIN--ILRAALTGNSQISTQYKHL----FVNRDAEKNSFDHMQLINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLTTSAYQAIHGSTRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMVENSDSTSPSLVPIYNRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVRVAAALLLESKMFYVPFLLNSSI 590 EGSS + G +NME+LW GD +QLP A++LT + QEGD E++ +ICMICEDKATGLHYGIITCEGCKGFFKRTVQN+R+Y CVADG CEI KAQRNRCQYCRF+KC+ +GMVL AVREDRMPGGRNSGAVYN+YKV + + K G + + E MP +N IL+ ALT S++ + L +RD + + +I LI CD+F+DIATL+N+ +LL+ SDL KL QIGDSIVYKLVQWT+RLPFY ELPV+VHTKLLTH WHELLVLTTSAYQAIHG+ R+ + +DG +A QEVS NL TLQTCLTSMMG+PITMDQLRQDVG MVEKIT V +FR+ KL M+EYVCLKVI M+ S + L + RY+ CLR Y P +P+R LL+RLPEV+ AA+LLLESKMFYVPFLLNS+I Sbjct: 185 EGSSISPGAVTGSASGRSLNMERLWAGDLSQLPG-AQQLTALNLSWAKPGLHQDKQQEGDIEEEDQPMICMICEDKATGLHYGIITCEGCKGFFKRTVQNRRVYTCVADGVCEITKAQRNRCQYCRFKKCIEQGMVLQAVREDRMPGGRNSGAVYNLYKVKYKKHKKSVRNGQMKGQADKGKPLISPEPASH-MPPHLVNGTILKTALTNPSEVVHLRQRLDSAVSSSRDRALSVDTTLSVIQTLIDCDEFQDIATLRNLEDLLDHK-SDLSDKLMQIGDSIVYKLVQWTKRLPFYLELPVEVHTKLLTHTWHELLVLTTSAYQAIHGAHRLVSTGSDGTEANFTQEVSNNLCTLQTCLTSMMGRPITMDQLRQDVGLMVEKITYVTLMFRRIKLTMQEYVCLKVIIMLNPSRGDANELEAMQERYMTCLRTYVEHSFPNQPNRFHDLLLRLPEVQSAASLLLESKMFYVPFLLNSTI 659
BLAST of orphan nuclear receptor vs. nr
Match: gi|939683905|ref|XP_014286557.1| (PREDICTED: hormone receptor 4 isoform X1 [Halyomorpha halys]) HSP 1 Score: 523.472 bits (1347), Expect = 6.255e-176 Identity = 273/463 (58.96%), Postives = 328/463 (70.84%), Query Frame = 0 Query: 153 GIPINMEKLWDGDRTQLPANAKKLT------------EGTTQEGDDHIEEESLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYNMYKV-------KYKKNKNKSSGKTGGEISTKETHQFDMPCQNIN--ILRAALTGNSQISTQYKHL----FVNRDAEKNSFDHMQLINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLTTSAYQAIHGSTRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMVENSDSTSPSLVPIYNRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVRVAAALLLESKMFYVPFLLNSSI 590 G +NME+LW GD +QLP A++LT + QEGD E++ +ICMICEDKATGLHYGIITCEGCKGFFKRTVQN+R+Y CVADG CEI KAQRNRCQYCRF+KC+ +GMVL AVREDRMPGGRNSGAVYN+YKV + + K G + + E MP +N IL+ ALT S++ + L +RD + + +I LI CD+F+DIATL+N+ +LL+ SDL KL QIGDSIVYKLVQWT+RLPFY ELPV+VHTKLLTH WHELLVLTTSAYQAIHG+ R+ + +DG +A QEVS NL TLQTCLTSMMG+PITMDQLRQDVG MVEKIT V +FR+ KL M+EYVCLKVI M+ S + L + RY+ CLR Y P +P+R LL+RLPEV+ AA+LLLESKMFYVPFLLNS+I Sbjct: 214 GRSLNMERLWAGDLSQLPG-AQQLTALNLSWAKPGLHQDKQQEGDIEEEDQPMICMICEDKATGLHYGIITCEGCKGFFKRTVQNRRVYTCVADGVCEITKAQRNRCQYCRFKKCIEQGMVLQAVREDRMPGGRNSGAVYNLYKVKYKKHKKSVRNGQMKGQADKGKPLISPEPASH-MPPHLVNGTILKTALTNPSEVVHLRQRLDSAVSSSRDRALSVDTTLSVIQTLIDCDEFQDIATLRNLEDLLDHK-SDLSDKLMQIGDSIVYKLVQWTKRLPFYLELPVEVHTKLLTHTWHELLVLTTSAYQAIHGAHRLVSTGSDGTEANFTQEVSNNLCTLQTCLTSMMGRPITMDQLRQDVGLMVEKITYVTLMFRRIKLTMQEYVCLKVIIMLNPSRGDANELEAMQERYMTCLRTYVEHSFPNQPNRFHDLLLRLPEVQSAASLLLESKMFYVPFLLNSTI 673
BLAST of orphan nuclear receptor vs. nr
Match: gi|939683908|ref|XP_014286558.1| (PREDICTED: hormone receptor 4 isoform X2 [Halyomorpha halys]) HSP 1 Score: 523.087 bits (1346), Expect = 7.625e-176 Identity = 277/478 (57.95%), Postives = 333/478 (69.67%), Query Frame = 0 Query: 146 EGSSYTRGI--------PINMEKLWDGDRTQLPANAKKLT------------EGTTQEGDDHIEEESLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYNMYKV-------KYKKNKNKSSGKTGGEISTKETHQFDMPCQNIN--ILRAALTGNSQISTQYKHL----FVNRDAEKNSFDHMQLINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLTTSAYQAIHGSTRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMVENSDSTSPSLVPIYNRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVRVAAALLLESKMFYVPFLLNSSI 590 EGSS + G +NME+LW GD +QLP A++LT + QEGD E++ +ICMICEDKATGLHYGIITCEGCKGFFKRTVQN+R+Y CVADG CEI KAQRNRCQYCRF+KC+ +GMVL AVREDRMPGGRNSGAVYN+YKV + + K G + + E MP +N IL+ ALT S++ + L +RD + + +I LI CD+F+DIATL+N+ +LL+ SDL KL QIGDSIVYKLVQWT+RLPFY ELPV+VHTKLLTH WHELLVLTTSAYQAIHG+ R+ + +DG +A QEVS NL TLQTCLTSMMG+PITMDQLRQDVG MVEKIT V +FR+ KL M+EYVCLKVI M+ S + L + RY+ CLR Y P +P+R LL+RLPEV+ AA+LLLESKMFYVPFLLNS+I Sbjct: 194 EGSSISPGAVTGSASGRSLNMERLWAGDLSQLPG-AQQLTALNLSWAKPGLHQDKQQEGDIEEEDQPMICMICEDKATGLHYGIITCEGCKGFFKRTVQNRRVYTCVADGVCEITKAQRNRCQYCRFKKCIEQGMVLQAVREDRMPGGRNSGAVYNLYKVKYKKHKKSVRNGQMKGQADKGKPLISPEPASH-MPPHLVNGTILKTALTNPSEVVHLRQRLDSAVSSSRDRALSVDTTLSVIQTLIDCDEFQDIATLRNLEDLLDHK-SDLSDKLMQIGDSIVYKLVQWTKRLPFYLELPVEVHTKLLTHTWHELLVLTTSAYQAIHGAHRLVSTGSDGTEANFTQEVSNNLCTLQTCLTSMMGRPITMDQLRQDVGLMVEKITYVTLMFRRIKLTMQEYVCLKVIIMLNPSRGDANELEAMQERYMTCLRTYVEHSFPNQPNRFHDLLLRLPEVQSAASLLLESKMFYVPFLLNSTI 668 The following BLAST results are available for this feature:
BLAST of orphan nuclear receptor vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 25
Pagesback to top
BLAST of orphan nuclear receptor vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
Pagesback to top
BLAST of orphan nuclear receptor vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold491_size156641:8337..11777+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold491_size156641-snap-gene-0.24 ID=maker-scaffold491_size156641-snap-gene-0.24|Name=orphan nuclear receptor|organism=Tigriopus kingsejongensis|type=gene|length=3441bp|location=Sequence derived from alignment at scaffold491_size156641:8337..11777+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'orphan nuclear receptor' has the following synonyms
Add to Basket
|