pdz and lim domain protein zasp, maker-scaffold493_size155937-snap-gene-0.19 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of pdz and lim domain protein zasp vs. L. salmonis genes
Match: EMLSAG00000012903 (supercontig:LSalAtl2s:LSalAtl2s981:232799:243926:-1 gene:EMLSAG00000012903 transcript:EMLSAT00000012903 description:"maker-LSalAtl2s981-augustus-gene-1.70") HSP 1 Score: 154.836 bits (390), Expect = 2.500e-39 Identity = 94/237 (39.66%), Postives = 134/237 (56.54%), Query Frame = 0 Query: 572 LYPKPMDDYDYPWAGSLKPVSNQLFAKDYKSKREANDPGPCPWAGSLRPVRDKRNRAQRRSRHDDEFDGKAPWAGSLKHVP---NPPHSTFHRHQVTQFKRYPDEDAPNPYQGYR---------------INELQMKEEE------EQMERIRNNLRERKTVSNSLLKVLMPKLLAEHSSKYEPMSEDESLKIMQDILAMKIGLNSDQNIEDNEEAEQMIRAITHGEISKDVYSQMA 784 YP+ +D++YPW GSL+PVS+ + + R+ +D G PWA SLR V D +Q+R + APW G+L+HV NPP + QFKRYPDEDAPNP+Q R +N +E + +E IR NLRE +SN+LL+VLMPKLL EH SKYEP+S +ES +IMQ+IL+ KIG ++ + D + +++ A+ G++ D+ S M Sbjct: 465 FYPQLFEDFEYPWKGSLRPVSDNMHRHE---SRDFDDEG-VPWASSLRHVPD----SQKRKKPSKTESTTAPWVGTLRHVKATNNPPK----KFTKPQFKRYPDEDAPNPFQSLRGKDARPAYPLTPAAYVNSSSKDGDELAGNANDDVEXIRANLREXXAISNALLRVLMPKLLKEHESKYEPLSFEESQRIMQEILSQKIGTKENEALNDLDLNKEIDEALL-GKVEDDLKSAMT 688 HSP 2 Score: 93.2041 bits (230), Expect = 9.121e-20 Identity = 51/120 (42.50%), Postives = 70/120 (58.33%), Query Frame = 0 Query: 210 EDTKYDNLASEDRRVVGFKDILKPTLRKDWNCPWVKRDGRGLKHLVRGQYAAEPVVAPVATSHWHFYSQPHSILDPG---LSEEEVREMQRKFFEEQERLIQMEEDKRREEIEDAQRRRD 326 ED + SE+R +G D+ KP RKDWN PW+++DG+GLK + R + +PV APV TSH HFYS+PHS+L P + E++ EM+ E +Q E +R EE RR D Sbjct: 34 EDIVIEKARSEER--IGEHDVRKPHSRKDWNTPWIRKDGKGLKKIFRNVHGIDPVAAPVKTSHNHFYSEPHSLLGPEPEPIPLEKLEEMREAISRTHE--LQRSEKRREEESLRTHRRVD 149
BLAST of pdz and lim domain protein zasp vs. L. salmonis genes
Match: EMLSAG00000011910 (supercontig:LSalAtl2s:LSalAtl2s83:648777:650831:1 gene:EMLSAG00000011910 transcript:EMLSAT00000011910 description:"maker-LSalAtl2s83-augustus-gene-6.20") HSP 1 Score: 67.3958 bits (163), Expect = 6.687e-13 Identity = 34/91 (37.36%), Postives = 51/91 (56.04%), Query Frame = 0 Query: 1 MPAELITVDLFRDFKDEPWGFTITGGKAYDEPLSISDIQVKSIAERLGLKIDDVLIKINGEEAEEFTYEEACQEIAKGEDSFDMVIERTTH 91 MP E++ + L R K+EPWGF I GGK + + + I+ S AE GLK D + +ING+E E ++ + +EI + S + ER H Sbjct: 1 MPKEIVNLALKRSGKNEPWGFVIIGGKDQNLTVKVGKIKPYSPAEEAGLKTMDYVWQINGKEVFEMSHNDCVKEIKESGTSLSLSTERGDH 91
BLAST of pdz and lim domain protein zasp vs. SwissProt
Match: gi|20178312|sp|O00151.4|PDLI1_HUMAN (RecName: Full=PDZ and LIM domain protein 1; AltName: Full=C-terminal LIM domain protein 1; AltName: Full=Elfin; AltName: Full=LIM domain protein CLP-36) HSP 1 Score: 59.3066 bits (142), Expect = 4.403e-8 Identity = 27/74 (36.49%), Postives = 40/74 (54.05%), Query Frame = 0 Query: 18 PWGFTITGGKAYDEPLSISDIQVKSIAERLGLKIDDVLIKINGEEAEEFTYEEACQEIAKGEDSFDMVIERTTH 91 PWGF + GGK +++PL+IS + S A L I DV+ I+GE T+ EA I D+ + + R+ H Sbjct: 13 PWGFRLVGGKDFEQPLAISRVTPGSKAALANLCIGDVITAIDGENTSNMTHLEAQNRIKGCTDNLTLTVARSEH 86
BLAST of pdz and lim domain protein zasp vs. SwissProt
Match: gi|317373590|sp|Q96HC4.5|PDLI5_HUMAN (RecName: Full=PDZ and LIM domain protein 5; AltName: Full=Enigma homolog; AltName: Full=Enigma-like PDZ and LIM domains protein) HSP 1 Score: 58.5362 bits (140), Expect = 1.416e-7 Identity = 26/75 (34.67%), Postives = 45/75 (60.00%), Query Frame = 0 Query: 18 PWGFTITGGKAYDEPLSISDIQVKSIAERLGLKIDDVLIKINGEEAEEFTYEEACQEIAKGEDSFDMVIERTTHA 92 PWGF + GGK ++ PL+IS ++ A + ++I DV++ I+G A+ T+ EA +I S +M ++R + A Sbjct: 13 PWGFRLQGGKDFNMPLTISSLKDGGKAAQANVRIGDVVLSIDGINAQGMTHLEAQNKIKGCTGSLNMTLQRASAA 87
BLAST of pdz and lim domain protein zasp vs. SwissProt
Match: gi|47605563|sp|Q62920.2|PDLI5_RAT (RecName: Full=PDZ and LIM domain protein 5; AltName: Full=Enigma homolog; AltName: Full=Enigma-like PDZ and LIM domains protein) HSP 1 Score: 58.5362 bits (140), Expect = 1.589e-7 Identity = 26/75 (34.67%), Postives = 45/75 (60.00%), Query Frame = 0 Query: 18 PWGFTITGGKAYDEPLSISDIQVKSIAERLGLKIDDVLIKINGEEAEEFTYEEACQEIAKGEDSFDMVIERTTHA 92 PWGF + GGK ++ PL+IS ++ A + ++I DV++ I+G A+ T+ EA +I S +M ++R + A Sbjct: 13 PWGFRLQGGKDFNMPLTISSLKDGGKASQAHVRIGDVVLSIDGISAQGMTHLEAQNKIKACTGSLNMTLQRASAA 87
BLAST of pdz and lim domain protein zasp vs. SwissProt
Match: gi|341942252|sp|Q8CI51.4|PDLI5_MOUSE (RecName: Full=PDZ and LIM domain protein 5; AltName: Full=Enigma homolog; AltName: Full=Enigma-like PDZ and LIM domains protein) HSP 1 Score: 58.5362 bits (140), Expect = 1.644e-7 Identity = 26/75 (34.67%), Postives = 45/75 (60.00%), Query Frame = 0 Query: 18 PWGFTITGGKAYDEPLSISDIQVKSIAERLGLKIDDVLIKINGEEAEEFTYEEACQEIAKGEDSFDMVIERTTHA 92 PWGF + GGK ++ PL+IS ++ A + ++I DV++ I+G A+ T+ EA +I S +M ++R + A Sbjct: 13 PWGFRLQGGKDFNMPLTISSLKDGGKASQAHVRIGDVVLSIDGISAQGMTHLEAQNKIKACTGSLNMTLQRASAA 87
BLAST of pdz and lim domain protein zasp vs. SwissProt
Match: gi|1179881477|sp|D4A702.2|SYNP2_RAT (RecName: Full=Synaptopodin-2; AltName: Full=Myopodin) HSP 1 Score: 57.3806 bits (137), Expect = 4.164e-7 Identity = 26/75 (34.67%), Postives = 41/75 (54.67%), Query Frame = 0 Query: 18 PWGFTITGGKAYDEPLSISDIQVKSIAERLGLKIDDVLIKINGEEAEEFTYEEACQEIAKGEDSFDMVIERTTHA 92 PWGF + GGK +PL ++ I+ +S A GL + D ++ ING + TY E + + DS ++I+R T Sbjct: 16 PWGFRLQGGKEEKQPLQVAKIRSQSKASDSGLCVGDEVVSINGNPCADLTYPEVIKLMESITDSLHLLIKRPTSG 90
BLAST of pdz and lim domain protein zasp vs. SwissProt
Match: gi|82202428|sp|Q6P7E4.1|PDLI7_DANRE (RecName: Full=PDZ and LIM domain protein 7) HSP 1 Score: 56.225 bits (134), Expect = 5.315e-7 Identity = 30/94 (31.91%), Postives = 46/94 (48.94%), Query Frame = 0 Query: 18 PWGFTITGGKAYDEPLSISDIQVKSIAERLGLKIDDVLIKINGEEAEEFTYEEACQEIAKGEDSFDMVIERTTHAEIRLNPEQQASEAEDDRQP 111 PWGF + GGK ++ PL++S + A + G+ + D ++ I AEE T+ EA +I DS + + R H EQ+ S QP Sbjct: 13 PWGFRLQGGKDFNTPLTVSRLTPGGKAAQAGVGVGDWVVSIFDANAEEMTHVEAQNKIRAATDSLKLTLSRAFHPA---GGEQKDSLTSSSSQP 103
BLAST of pdz and lim domain protein zasp vs. nr
Match: gi|225713230|gb|ACO12461.1| (PDZ and LIM domain protein 3 [Lepeophtheirus salmonis] >gi|225714146|gb|ACO12919.1| PDZ and LIM domain protein 3 [Lepeophtheirus salmonis] >gi|290462547|gb|ADD24321.1| PDZ and LIM domain protein 3 [Lepeophtheirus salmonis]) HSP 1 Score: 67.781 bits (164), Expect = 5.806e-9 Identity = 34/91 (37.36%), Postives = 51/91 (56.04%), Query Frame = 0 Query: 1 MPAELITVDLFRDFKDEPWGFTITGGKAYDEPLSISDIQVKSIAERLGLKIDDVLIKINGEEAEEFTYEEACQEIAKGEDSFDMVIERTTH 91 MP E++ + L R K+EPWGF I GGK + + + I+ S AE GLK D + +ING+E E ++ + +EI + S + ER H Sbjct: 1 MPKEIVNLALKRSGKNEPWGFVIIGGKDQNLTVKVGKIKPYSPAEEAGLKTMDYVWQINGKEVFEMSHNDCVKEIKESGTSLSLSTERGDH 91
BLAST of pdz and lim domain protein zasp vs. nr
Match: gi|1036807963|ref|XP_017136930.1| (PREDICTED: synaptopodin 2-like protein isoform X3 [Drosophila miranda]) HSP 1 Score: 71.2478 bits (173), Expect = 5.812e-9 Identity = 51/168 (30.36%), Postives = 81/168 (48.21%), Query Frame = 0 Query: 5 LITVDLFRDFKDEPWGFTITGGKAYDEPLSISDIQVKSIAERLGLKIDDVLIKINGEEAEEFTYEEACQEIAKGEDSFDMVIERTTHAEIRLNPEQ-QASEAEDDRQPVEEPIFMAVNIPKTYSDSPPPDLEALSTAATSGVTPELGSVDRESSEQPPELEPIPPSAG 171 ++ + + R F + PWGF + GG YD PL++ + SIA+ GL+++D++++IN A T++EA + I F + R ++ P++ SE+ + P P S SP P L L+ AA + TPEL S EP+PP AG Sbjct: 2 VLDIKMCR-FDNVPWGFRLVGGADYDYPLTVVKVTEGSIADEAGLRVEDIIVRINDTAAMPLTHDEAHRLIMNSGSVFYFGVYRELEEDVYECPKRFPTSESSLTKSPTPTPPL---------SLSPTPSLLRLAEAANAR-TPELWS------------EPVPPVAG 146
BLAST of pdz and lim domain protein zasp vs. nr
Match: gi|1316171870|ref|XP_023231380.1| (PDZ and LIM domain protein Zasp-like isoform X2 [Centruroides sculpturatus]) HSP 1 Score: 71.2478 bits (173), Expect = 5.818e-9 Identity = 35/83 (42.17%), Postives = 49/83 (59.04%), Query Frame = 0 Query: 6 ITVDLFRDFKDEPWGFTITGGKAYDEPLSISDIQVKSIAERLGLKIDDVLIKINGEEAEEFTYEEACQEIAKGEDSFDMVIER 88 ITV L R ++ PWGF + GGK + PLSI + SIAER GL+ D ++KI G E ++EA I K + +M++ER Sbjct: 4 ITVKLSRG-ENTPWGFRLQGGKDFSAPLSIGRVNPDSIAERAGLQTGDAILKIMGRSTETMKHKEAQDTIVKSGNLLEMIVER 85
BLAST of pdz and lim domain protein zasp vs. nr
Match: gi|1036807981|ref|XP_017136931.1| (PREDICTED: synaptopodin 2-like protein isoform X4 [Drosophila miranda]) HSP 1 Score: 70.8626 bits (172), Expect = 6.128e-9 Identity = 51/168 (30.36%), Postives = 81/168 (48.21%), Query Frame = 0 Query: 5 LITVDLFRDFKDEPWGFTITGGKAYDEPLSISDIQVKSIAERLGLKIDDVLIKINGEEAEEFTYEEACQEIAKGEDSFDMVIERTTHAEIRLNPEQ-QASEAEDDRQPVEEPIFMAVNIPKTYSDSPPPDLEALSTAATSGVTPELGSVDRESSEQPPELEPIPPSAG 171 ++ + + R F + PWGF + GG YD PL++ + SIA+ GL+++D++++IN A T++EA + I F + R ++ P++ SE+ + P P S SP P L L+ AA + TPEL S EP+PP AG Sbjct: 2 VLDIKMCR-FDNVPWGFRLVGGADYDYPLTVVKVTEGSIADEAGLRVEDIIVRINDTAAMPLTHDEAHRLIMNSGSVFYFGVYRELEEDVYECPKRFPTSESSLTKSPTPTPPL---------SLSPTPSLLRLAEAANAR-TPELWS------------EPVPPVAG 146
BLAST of pdz and lim domain protein zasp vs. nr
Match: gi|290562191|gb|ADD38492.1| (PDZ and LIM domain protein 3 [Lepeophtheirus salmonis]) HSP 1 Score: 67.3958 bits (163), Expect = 6.263e-9 Identity = 34/91 (37.36%), Postives = 51/91 (56.04%), Query Frame = 0 Query: 1 MPAELITVDLFRDFKDEPWGFTITGGKAYDEPLSISDIQVKSIAERLGLKIDDVLIKINGEEAEEFTYEEACQEIAKGEDSFDMVIERTTH 91 MP E++ + L R K+EPWGF I GGK + + + I+ S AE GLK D + +ING+E E ++ + +EI + S + ER H Sbjct: 1 MPKEIVNLALKRSGKNEPWGFVIIGGKDQNLTVKVGKIKPYSPAEEAGLKTMDYVWQINGKEVFEMSHNDCVKEIKESGTSLSLSTERGDH 91
BLAST of pdz and lim domain protein zasp vs. nr
Match: gi|674588050|emb|CDS32950.1| (PDZ and LIM domain protein Zasp [Hymenolepis microstoma]) HSP 1 Score: 68.5514 bits (166), Expect = 7.821e-9 Identity = 31/88 (35.23%), Postives = 51/88 (57.95%), Query Frame = 0 Query: 1 MPAELITVDLFRDFKDEPWGFTITGGKAYDEPLSISDIQVKSIAERLGLKIDDVLIKINGEEAEEFTYEEACQEIAKGEDSFDMVIER 88 M +L+T+ LFR WGF + GG PL+I I S+AER GL+ D +++IN + T+E+A EI + + F+++++R Sbjct: 1 MAGQLLTLKLFRPDSSIQWGFRLEGGVDVGHPLNIQRITNGSVAERCGLRGGDYVLRINKTDTRNLTHEQAKMEIIRSSNDFEVLVQR 88
BLAST of pdz and lim domain protein zasp vs. nr
Match: gi|1101342906|ref|XP_018897108.1| (PREDICTED: PDZ and LIM domain protein Zasp-like isoform X2 [Bemisia tabaci]) HSP 1 Score: 71.2478 bits (173), Expect = 8.320e-9 Identity = 32/86 (37.21%), Postives = 50/86 (58.14%), Query Frame = 0 Query: 3 AELITVDLFRDFKDEPWGFTITGGKAYDEPLSISDIQVKSIAERLGLKIDDVLIKINGEEAEEFTYEEACQEIAKGEDSFDMVIER 88 A+L+TV L R + PWGF + GGK + PL I + SIAER GL + D L+ +NG + ++EA I +G + ++ ++R Sbjct: 2 AQLVTVKLVRH-DNTPWGFRLQGGKDFGTPLLIQKVNGGSIAERAGLAVGDGLVTVNGYDVFNLKHKEAQDAIVQGGNCLELQVQR 86
BLAST of pdz and lim domain protein zasp vs. nr
Match: gi|1101342914|ref|XP_018897112.1| (PREDICTED: PDZ and LIM domain protein Zasp-like isoform X6 [Bemisia tabaci]) HSP 1 Score: 71.2478 bits (173), Expect = 8.546e-9 Identity = 32/86 (37.21%), Postives = 50/86 (58.14%), Query Frame = 0 Query: 3 AELITVDLFRDFKDEPWGFTITGGKAYDEPLSISDIQVKSIAERLGLKIDDVLIKINGEEAEEFTYEEACQEIAKGEDSFDMVIER 88 A+L+TV L R + PWGF + GGK + PL I + SIAER GL + D L+ +NG + ++EA I +G + ++ ++R Sbjct: 2 AQLVTVKLVRH-DNTPWGFRLQGGKDFGTPLLIQKVNGGSIAERAGLAVGDGLVTVNGYDVFNLKHKEAQDAIVQGGNCLELQVQR 86
BLAST of pdz and lim domain protein zasp vs. nr
Match: gi|1101342912|ref|XP_018897111.1| (PREDICTED: PDZ and LIM domain protein Zasp-like isoform X5 [Bemisia tabaci]) HSP 1 Score: 71.2478 bits (173), Expect = 8.711e-9 Identity = 32/86 (37.21%), Postives = 50/86 (58.14%), Query Frame = 0 Query: 3 AELITVDLFRDFKDEPWGFTITGGKAYDEPLSISDIQVKSIAERLGLKIDDVLIKINGEEAEEFTYEEACQEIAKGEDSFDMVIER 88 A+L+TV L R + PWGF + GGK + PL I + SIAER GL + D L+ +NG + ++EA I +G + ++ ++R Sbjct: 2 AQLVTVKLVRH-DNTPWGFRLQGGKDFGTPLLIQKVNGGSIAERAGLAVGDGLVTVNGYDVFNLKHKEAQDAIVQGGNCLELQVQR 86
BLAST of pdz and lim domain protein zasp vs. nr
Match: gi|1101342908|ref|XP_018897109.1| (PREDICTED: PDZ and LIM domain protein Zasp-like isoform X3 [Bemisia tabaci]) HSP 1 Score: 71.2478 bits (173), Expect = 8.830e-9 Identity = 32/86 (37.21%), Postives = 50/86 (58.14%), Query Frame = 0 Query: 3 AELITVDLFRDFKDEPWGFTITGGKAYDEPLSISDIQVKSIAERLGLKIDDVLIKINGEEAEEFTYEEACQEIAKGEDSFDMVIER 88 A+L+TV L R + PWGF + GGK + PL I + SIAER GL + D L+ +NG + ++EA I +G + ++ ++R Sbjct: 2 AQLVTVKLVRH-DNTPWGFRLQGGKDFGTPLLIQKVNGGSIAERAGLAVGDGLVTVNGYDVFNLKHKEAQDAIVQGGNCLELQVQR 86 The following BLAST results are available for this feature:
BLAST of pdz and lim domain protein zasp vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 2
BLAST of pdz and lim domain protein zasp vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 6
BLAST of pdz and lim domain protein zasp vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold493_size155937:138123..148464+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold493_size155937-snap-gene-0.19 ID=maker-scaffold493_size155937-snap-gene-0.19|Name=pdz and lim domain protein zasp|organism=Tigriopus kingsejongensis|type=gene|length=10342bp|location=Sequence derived from alignment at scaffold493_size155937:138123..148464+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'pdz and lim domain protein zasp' has the following synonyms
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