homeotic gene, maker-scaffold495_size155559-snap-gene-0.32 (gene) Tigriopus kingsejongensis
|
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of homeotic gene vs. L. salmonis genes
Match: EMLSAG00000001280 (supercontig:LSalAtl2s:LSalAtl2s1211:177823:184435:1 gene:EMLSAG00000001280 transcript:EMLSAT00000001280 description:"augustus_masked-LSalAtl2s1211-processed-gene-1.3") HSP 1 Score: 265.774 bits (678), Expect = 3.639e-72 Identity = 170/479 (35.49%), Postives = 260/479 (54.28%), Query Frame = 0
Query: 588 LKEYQVKGLEWLVSLYNNCLNGILADEMGLGKTIQTIALIT--YLMERKKNMG--PYLIIVPLSTLSNWALEFEKWAPA--CNVVSYKGSPAARRTAQNAMRGSKFNVLVTTYEYVIKDKAMLSKIRWKYMIIDEGHRMKNHHCKLTQILNTFYTSNNRLLLTGTPLQNKLPELWALLNFLLPSIFKACNTFEQWFNAPFAITGEK--VELNEEETILIIRRLHKVLRPFLLRRLKKDVESQLPDKVEYIVKCEMSGLQRTLYNHMQEKGVMKTDKINKGKKGAKA-LMNTIMQLRKLCNHP-FMYQPIEEAYAKHIGMPTDIVTGPDVYRSSGKFELIDRILPKLKATGHRVLMFCQMTQCMTIIEDYFNYR---GFKFLRLDGMTKSEDRADMLKIFNEKASDYFIFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARFKL 1053
L+ YQ G+ WL L L+GIL D+MGLGKT+Q+I ++ + +NM P L+I P + +W E K+ + + Y G+ R + + + K N+L+T+Y+ V KD L +I+W Y+I+DEGH +KN K T + + +SN+RL+L+GTP+QN + E+W+L +FL+P + F F+ P + E + ++E L LH+ + PF+LRR+K+DV LP K+ C++S LQ LY K + N K +K+ + + LRK+CNHP + + ++ I + + ++ G + A+ HR L+F Q+ + I+E+ +LRLDG + R ++++ FN S I LLST GGLGLNL ADTV+ + DWNP +DLQA DRAHRIGQK V V RL+T N++EE+IL +FKL
Sbjct: 1130 LRSYQRSGVNWLAFLNRYKLHGILCDDMGLGKTLQSICILAGDHYNRINQNMENIPSLVICPPTLRWHWKEEILKFTKGKFLSPLLYNGNTVNRSSTRTFIE--KNNILITSYDIVRKDIEFLKEIKWNYIILDEGHIIKNAKAKTTIAIKSL-SSNHRLILSGTPIQNSVLEIWSLFDFLMPGYLGSEREFSSKFSKPIIASRESKCSKRDKEAGALATESLHRQILPFVLRRMKEDVLKDLPPKITQDYYCDLSPLQIRLYEEYTLKQKLDDLDXNSIKPTSKSHIFQALQYLRKVCNHPKLVSNELSVTQSQDISVAAKLPALKELLLECGIGIVEGEDNQLCLASQHRALIFFQLKSMIDIVENDLLKNLMPSVTYLRLDGSVPTNMRHEIVQRFNNDVS-IDILLLSTSVGGLGLNLTGADTVIFAEHDWNPMKDLQAMDRAHRIGQKKVVNVYRLITRNTIEEKILGLQKFKL 1604
BLAST of homeotic gene vs. L. salmonis genes
Match: EMLSAG00000000949 (supercontig:LSalAtl2s:LSalAtl2s1166:23108:29489:-1 gene:EMLSAG00000000949 transcript:EMLSAT00000000949 description:"maker-LSalAtl2s1166-augustus-gene-0.44") HSP 1 Score: 252.677 bits (644), Expect = 5.388e-68 Identity = 143/376 (38.03%), Postives = 223/376 (59.31%), Query Frame = 0
Query: 745 GTPLQNKLPELWALLNFLLPSIFKACNTFEQWFNAPFAITGEKVELNEEETILIIRRLHKVLRPFLLRRLKKDVESQLPDKVEYIVKCEMSGLQRTLYNHMQEKGVMKTDKINKGKKGAK-ALMNTIMQLRKLCNHPFMYQPIEEAYAKHIGMPTDIVTGPDVYRSSGKFELIDRILPKLKATGHRVLMFCQMTQCMTIIEDYFNYRGFKFLRLDGMTKSEDRADMLKIFNEKASDYFIFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARFKLNMDEKVIQAGRFNNRSTGSERRELLQSILRADEEE------EEENEVPDDEVINQMIARSEDEFEK 1113
GTPLQN L EL+ LLNFL PS F + F+ F ++ +EE + ++LH +L P +LRR+K DV +P K E+IV+ +S +Q+ Y ++ + + + + G + +L+N +M+L+K+ NHP + E + ++ + ++ GK L+ ++L KLK TGHRVL+F QMT+ + ++ED+ G+K+ R+DG R D + FN ++ F+FLLSTRAGGLG+NL TADTVVI+DSDWNPH D+QA RAHRIGQKN+V + R +T N+VEER+ A+ K+ + V+Q G +++ S++ + IL+ EE EE+ V +D I ++ RS++ E+
Sbjct: 745 GTPLQNNLEELFYLLNFLTPSKFNDLDAFQSNF----------TDIAKEEQV---KQLHALLGPHMLRRMKADVLKNMPSKSEFIVRTNLSNMQKKYYKNI----LTHNFEALRARSGVQTSLLNVMMELKKVANHPXLLAAAAEEAPLSVSGLFEVKA---MTQACGKLVLLSKMLRKLKETGHRVLIFSQMTKMLDLLEDFMEGEGYKYERIDGGVTGTLRQDAIDRFNYPNAEQFVFLLSTRAGGLGINLYTADTVVIYDSDWNPHNDIQALSRAHRIGQKNKVMIYRFVTRNTVEERVTQVAKKKMMLTHLVVQPGLSGSKTNLSKKE--IDDILKFGTEELFNTENREEDIVYNDTAIESLLDRSQEGIEE 1098
BLAST of homeotic gene vs. L. salmonis genes
Match: EMLSAG00000012427 (supercontig:LSalAtl2s:LSalAtl2s90:869777:873113:1 gene:EMLSAG00000012427 transcript:EMLSAT00000012427 description:"maker-LSalAtl2s90-augustus-gene-8.6") HSP 1 Score: 216.853 bits (551), Expect = 1.604e-57 Identity = 190/684 (27.78%), Postives = 320/684 (46.78%), Query Frame = 0
Query: 581 PMLVGGKLKEYQVKGLEWLVSLYNN--CLNGILADEMGLGKTIQTIALITYLME-----------RKKNMGPYLIIVPLSTLSNWALEFEKWAPACNVVSYKGSPAARRTAQNAMRGSKFNVLVTTYEYVIKDKAMLSKIR-WKYMIIDEGHRMKNHHCKLTQILNTFYTSN-NRLLLTGTPLQNKLPELWALLNFLLPSIFKACNTFEQWFNAPFAITGEKVELNEEETIL----IIRRLHKVLR-PFLLRRLKKDVESQLPDKVEYIVKCEMSGLQRTLYNHMQEKGVMKT-----------------DKINKGKKGAKALMNTIMQLRKLCNHPFMYQP-------------------IEEAYAKHIGMPTDIVTGPDVYRSSGKFELIDRILPKLKA-TGHRVLMFCQMTQCMTIIEDYFNYRGFKFLRLDGMTKSEDRADMLKIFNEKASDYFIFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARFKLNMDEK---VIQAGRFNNRSTGSERRELLQS----ILRADEEEEEENEVPDDEVINQMIARSEDEFEKFTQMDLDRRREEAALGPNRKDRLIQIKELPEFLLAEDDDDDEEEEEEIVYGRGSRAKKETNYNDQLSDKEWL------KVIGAEDEE 1194
P + L+ YQ+ G+ +L LY+ G+LADEMGLGKTIQ I + L ++K G L++ P S + NW E + W+ ++ Y G + N+ K+ +++T+Y+ + +D ++S + WK +I+DE HR+K+ + + ++L ++ +S ++ L G LQNK ELWALL ++ F ++ P + + LN + L +++R +L+ +LRR+KKD LP K++ I+ C + LQ L+ + M+ K + K K + I K+ NH + P + + K I + ++ D R SGK ++ +L LK G+++L+F T+ + I+E + R + R+DG T ++ R ++ FNE + F+ LLST+AGGLGLN+ A+ V+I+D +WNP DLQAQDRA+RIGQ +VRV RL+T +EE I +K + ++ R+ S ++RE+ + +R + E ++ + Q ++ E F +LD + RL + K+ P FL+ D D+E+ +E+I+ + T + LS K L VIG EE
Sbjct: 36 PAPLAKCLRPYQIDGIRFLYGLYSKPGVNGGLLADEMGLGKTIQVIGFLASLSNKTNIGVIDGNLKRKIRGRXLLVSPASIIYNWESELQTWS-YFSIGLYYGPNRKKEILYNS--PEKYEIILTSYDILREDIDIISSLFPWKVIILDEIHRLKDPNGRNHKVLKSYLSSIPLKIGLAGVLLQNKYQELWALLEWVNAGCLGTWKDFNAKYSRPIELG---LRLNATTSQLARARLLQRDFDILKDEMILRRMKKDKFVDLPLKLDKIIYCAPTPLQIALFRKLLNTPEMQALWKKKKKGKYWNKGQSESKSSPDSKKIK-VFTFIHLFLKIANHVGLLSPKFNQSSKTQREFASRAISQVVSDFYKEIANXS-FLSLADT-RYSGKMVVLADLLTALKKEQGNKLLLFSYSTKVLNILEQFIKLRXYXXRRIDGATPAKTRFSIVNEFNEHP-NIFVLLLSTKAGGLGLNITGANVVIIYDPNWNPSHDLQAQDRAYRIGQTKDVRVFRLITSGCIEENIYLRQLYKQQLCSNAVDCVKVKRYFQGSPNFDKREVFGTKNLFTIRTGGLCQTETIFKRNKEMEQSFKGNKYHIEDF---ELDPK------------RLFEGKDDP-FLI---DVDEEDSDEKIISNYQKKKSNATEVDSVLSSKNILHVHENNSVIGGSREE 690
BLAST of homeotic gene vs. L. salmonis genes
Match: EMLSAG00000000885 (supercontig:LSalAtl2s:LSalAtl2s1153:27270:31467:1 gene:EMLSAG00000000885 transcript:EMLSAT00000000885 description:"snap_masked-LSalAtl2s1153-processed-gene-0.34") HSP 1 Score: 197.593 bits (501), Expect = 1.443e-52 Identity = 144/511 (28.18%), Postives = 247/511 (48.34%), Query Frame = 0
Query: 588 LKEYQVKGLEWLVSLYNNCLNGI---------LADEMGLGKTIQTIALITYLMERKKNMGPYL----IIVPLSTLSNWALEFEKWAPACNVVSYKGSPAARRTAQNAMRGSKFN--------VLVTTYEYVIKDKAMLSKIRWKYMIIDEGHRMKNHHCKLTQILNTFYTSNNRLLLTGTPLQNKLPELWALLNFLLPSIFKACNTFEQWFNAPFAITGEKVELNEEETILIIRRLHK---VLRPFLLRRLKKDVESQLPDKVEYIVKCEMSGLQRTLYNHMQEKGVMKTDKINKGKKGAKAL----MNTIMQLRKLCNHP-FMYQPIEEAYAKHIGMPTDIVTGPDVYR--------SSGKFELIDRILPKLK-ATGHRVLMFCQMTQCMTIIEDYFNYRGFKFLRLDGMTKSEDRADMLKIFNEKASDYFIFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARFKLNMDEKVI 1060
L+ +Q +G++++ +C+ GI +A EMGLGKT+Q I L+ L+++ P + ++ P S + NW E KW V ++ + + G +L+ +YE ++L ++ DEGHR+KN Q L S R+LL+GTP+QN L E ++L++F+ + F + F P + G + +++ +++L + V+ ++RR + + LP K E ++ +++ LQ+ +Y + ++D I K KG++ + + I L+KL NHP +Y +E H G + P Y SGK ++D +L +K + +V++ TQ + + E + R + F+RLDG + RA ++ FN+ S FIF+LS++AGG GLNL A+ +V+FD DWNP D QA R R GQK E + R + V ++EE+I K + V+
Sbjct: 142 LRPHQREGVKFMY----DCVTGIRIPENYGCIMAXEMGLGKTLQCITLMWTLLKQSPECKPTIEKAIVVCPSSLVKNWYNEISKWLGG-RVQPLAMDGGSKDSIDKDLSGFINTYGRRPVNPILIISYETFRLHSSVLQSGEVGLVLCDEGHRLKNSENLTYQSLMGI-KSKRRVLLSGTPIQNDLLEYFSLIHFVNEGLLGTAQEFRKKFENPI-LRGRDADATDDDHKKGVQKLQEMAEVVNRCIIRRTQALLSKYLPVKYEQVICVQLTDLQKDIY-----QSFCRSDTIRKNLKGSEKVGFSPLRAITSLKKLVNHPDLIYNVCKEG---HEGFEKSLXYYPANYXPNGRLXPAYSGKLSVLDCLLAFVKNCSTDKVVLVSNYTQMLDLFERLCSLRNYGFVRLDGSMSIKKRAKVVDKFNDPTSPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKECFIYRFLAVGTIEEKIFQRQAHKKALSSCVV 637
BLAST of homeotic gene vs. L. salmonis genes
Match: EMLSAG00000000926 (supercontig:LSalAtl2s:LSalAtl2s1161:15078:15672:-1 gene:EMLSAG00000000926 transcript:EMLSAT00000000926 description:"maker-LSalAtl2s1161-snap-gene-0.15") HSP 1 Score: 142.895 bits (359), Expect = 1.122e-39 Identity = 91/197 (46.19%), Postives = 112/197 (56.85%), Query Frame = 0
Query: 437 TDEYINQLTDMVKQHKVEQVQKQKELRKKAKLEEQAGAMLDESSQMSDVRVHVKELSTGKIIRGDNAPLASELESWLEKNPGFEQVPRDEDSDDSDGEEKPETTSSAEAILAKAKEEATKEDEGDGVDYYTIAHTISEEITEQAPMLVGGKLKEYQVKGLEWLVSLYNNCLNGILADEMGLGKTIQTIALITYLMER 633
T+EYINQL DM KL E G +LDESS +S +R+HVKE+ +GK++RG L ++LE + + R +D+ KP +YY IAHT++E+IT Q+ +LVGG LKEYQ KGLEWLVSLY N LNGILADEMGLGKTIQTI LITYLMER
Sbjct: 3 TEEYINQLIDM-------------------KLREMEG-ILDESSLISHIRIHVKEILSGKVLRG------VLLLNFLE----IKTLMRSDDT-------KPNRE-----------------------NYYLIAHTVTEQITYQSKILVGGILKEYQNKGLEWLVSLYYNNLNGILADEMGLGKTIQTITLITYLMER 139
BLAST of homeotic gene vs. L. salmonis genes
Match: EMLSAG00000007056 (supercontig:LSalAtl2s:LSalAtl2s3:1778107:1780625:-1 gene:EMLSAG00000007056 transcript:EMLSAT00000007056 description:"augustus_masked-LSalAtl2s3-processed-gene-17.6") HSP 1 Score: 144.821 bits (364), Expect = 8.321e-36 Identity = 90/282 (31.91%), Postives = 142/282 (50.35%), Query Frame = 0
Query: 797 LIIRRLHKVLRPFLLRRLKKDVESQLPDKVEYIVKCEMSGLQRTLYNHMQEKGVMKTDKINKGKKGAKALMNTIMQLRKLCNHPFMYQPIEEAYAKHIGMPTDIVTGPDVYRSSGKFELIDRILPKLKATGHRVLMFCQMTQCMTIIEDYFNYRGFKFLRLDGMTKSEDRADMLKIFNEKASDYFIFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARFKLNMDEKVIQAGRFNNRSTGSERRELL 1078
L I L + F+LRR + + S LP K E ++ C +S LQ+ LY + D+I ++ + TI+ LRK+CN + +G +D + + K E++ +L LK+TG ++++ T+ + ++E + FK LRLDG T R ++ FN K SD F+ LLS++AGG GLNL A ++++D DWNP D+ A R R GQ V V RL+T ++EE+I K + + V+ A N T E ++L
Sbjct: 289 LKIEELSSITEKFILRRTQDVISSFLPPKTENVLFCGLSPLQKELYKKV-------IDQIFCEGFNSECVFTTIITLRKICNDTSLI----------LGNESD--SNSENKDRGSKIEIVSSMLNTLKSTGEKIVIVSISTKVLDVLEILCSKFNFKSLRLDGSTPGSKRQSIVNRFNNKFSDDFVLLLSSKAGGTGLNLIGASRIIMYDLDWNPSHDIXAMARVWRDGQTKPVFVYRLITTGTIEEKIFQRQVTKQGLGDGVVDAKTAINHFTQEELKDLF 551 HSP 2 Score: 55.4546 bits (132), Expect = 9.148e-8 Identity = 34/96 (35.42%), Postives = 52/96 (54.17%), Query Frame = 0
Query: 609 GILADEMGLGKTIQTIALITYLMERKKNMGPY---------LIIVPLSTLSNWALEFEKWAPACNVVSYKGSPAARRTAQNAMRGSKFNVLVTTYE 695
ILADEMGLGKT+QTI+L+ L+++ GP+ LI+ P S L NW EF KW + Y G ++ + + ++ V++ +YE
Sbjct: 169 AILADEMGLGKTLQTISLVYTLLKQ----GPWNGMPEIKRCLILAPSSLLGNWKEEFNKWLGPERLKVYVGESSSSKITE-YLKYPNEPVVIISYE 259
BLAST of homeotic gene vs. L. salmonis genes
Match: EMLSAG00000010347 (supercontig:LSalAtl2s:LSalAtl2s685:51126:60163:-1 gene:EMLSAG00000010347 transcript:EMLSAT00000010347 description:"maker-LSalAtl2s685-augustus-gene-0.11") HSP 1 Score: 140.584 bits (353), Expect = 1.367e-33 Identity = 123/415 (29.64%), Postives = 185/415 (44.58%), Query Frame = 0
Query: 712 MIIDEGHRMKNHHCKLTQILNTFYTSNNRLLLTGTPLQNKLPELWALLNFLLPSIFKACNTFEQWFNAPFAITGEKVELNEEETILIIRR---LHKVLRPFLLRRLKKDVESQLPDKVEYIVKCEMSGLQRTLYNHMQEKGVMKTDKINKGKKGAKALMNTIMQLRKLCNHP-FMYQPI---EEAYAKHIGMPTD---IVTGPDVYRSSGKFELID--------------------------RILPKLKATGHRVLMFCQMTQCMTIIEDYFNYRG--FKFLRLDGMTKSEDRADMLKIFNEKASDYFIFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARFKLNMDEKVIQAGRFNNRSTGSERRELLQSILRADEEE 1088
+I DEGHR+KN H ++ L T R++LTG PLQN L E W +++F+ P+ F F P G+ + ++ L+ R LH L+ F+ RR + LP K E+I+ M+ QR LY + + N K A AL K+ NHP +Y + E A + D + P + S K E ID +L K R+L+F Q + +IE++ K+ RLDG T +R ++ FN+ S +FL+ST+AG LG+NL A+ VV+FD+ WNP D QA R +R GQK + RL+ N +E I K M +++ R E +Q++LR++EE+
Sbjct: 1177 IICDEGHRIKNSHASISSALKAVKT-RRRVVLTGYPLQNNLMEYWCMVDFVRPNFLGTKTEFANMFERPIQ-NGQCADSLTKDVRLMKHRAHVLHNQLKGFVQRRSHVVLTKSLPPKEEHIIMLRMTPFQRYLYTAFMKDLLGANSVTNPLKAFAVAL--------KIYNHPDVLYHFLKKREINNAMDLDFDFDEFGVAINPKNGKVSFKKEEIDYDWINDSMDNYETGLIENSPKMCVFFSLLRKTLQENDRMLLFSQSLLSLNLIEEFLKKEEPELKYFRLDGSTSGLEREKLISTFNKDDS-IKLFLISTKAGSLGINLIGANRVVVFDASWNPCHDSQAVCRVYRYGQKKTSFIYRLIVDNCLERTIYDRQINKQGMSNRIVDELNPELRFQTKE----IQTLLRSNEED 1576 HSP 2 Score: 54.6842 bits (130), Expect = 2.320e-7 Identity = 32/82 (39.02%), Postives = 46/82 (56.10%), Query Frame = 0
Query: 588 LKEYQVKGLEWL-------VSLYNNCLNG-ILADEMGLGKTIQTIALITYLMERKKNMGPYLIIVPLSTLSNWALEFEKWAP 661
+K +Q+ G+ +L +S YN+ G ILA MGLGKTIQ + T + R LIIVP++T+ NW E+ +W P
Sbjct: 996 VKPHQIGGIRFLYDNIIESLSNYNSIGYGCILAHSMGLGKTIQVVCF-TDIFLRYTPGKRVLIIVPINTIQNWLNEYNQWIP 1076
BLAST of homeotic gene vs. L. salmonis genes
Match: EMLSAG00000006257 (supercontig:LSalAtl2s:LSalAtl2s340:718272:727664:1 gene:EMLSAG00000006257 transcript:EMLSAT00000006257 description:"snap_masked-LSalAtl2s340-processed-gene-7.12") HSP 1 Score: 126.716 bits (317), Expect = 2.612e-29 Identity = 112/432 (25.93%), Postives = 195/432 (45.14%), Query Frame = 0
Query: 491 ELSTGKIIRGDNAPLASELESWLEKNPG--------FEQVPRDEDSDDSDGEEK---------------PETTSSAEAILAKAKEEATKEDEGDGVDYYTI--AHTISEEITEQAPM----------------LVGGKLKEYQVKGLEWLVSLYNNCLNGILADEMGLGKTIQTIALITYLMERKKNMGPYLIIVPLSTLSNWALEFEKWAPACNVVSYKGSPAARRTAQNAMRGSKFNVLVTTYEYVIKDKAMLSKIRWKYMIIDEGHRMKNHHCKLTQILNTFYTSNNRLLLTGTPLQNKLPELWALLNFLLPSIFKACNTFEQWFNAPFAITGEKVELNEEETILIIRRLHKVLRPFLLRRLKKDVESQLPDKVEYIVKCEMSGLQRTLYNHMQEKGVMKTDKINKGKKG-AKALMNTIMQLRKLCNHP 880
E+ K++ PL+ L S PG ++Q+ +DE ++ S +E PE+ +S E L +K D + ++ I T++EE P+ + G L++YQ G++W +S+ + + G +ADE GLG+ I +A +++L P+LII P+S++S+W+ ++W P+ NV Y GS RR+ + R ++ +++T+Y D K W Y+I+ E + ++T IL+ S+ RL + L + +LW +L L P + Q + + G EE +++LH ++ PFLLRR + VE LP E + EM QR LY+ + +D + + G A+ N + +LR +C+HP
Sbjct: 21 EVELTKLLSDSQTPLSQILRS---DYPGVLSEYLDLYDQLIQDEQAEFSSSDEATSSEDEGDELELMTPPESGNSLEISLDSL---LSKNDTSNSINNLRIRDIQTLAEEADRHKPLKSSLRQLEVPHQKVIPFIRGDLRDYQRIGVDWXISMXKSKIXGAIADEPGLGRKIMIVAFLSWLSSSDMCRKPHLIITPVSSMSSWSSTLKRWCPSLNVQKYDGSENLRRSLRKCWRSNQ--IILTSYRVFFGDSHHFLKRFWNYLILHEAQNL-GRVSQMTSILD--LKSHLRLSVLDGHLPSNPIDLWNILYLLQPKTY----ALHQEIESRTFVEG------TEEYAETVKKLHAIISPFLLRRTRSQVERXLPLPEEKVYILEMMPKQRRLYDDF----LATSDTRSTLQTGDPVAVSNVLKKLRLICDHP 427 HSP 2 Score: 59.6918 bits (143), Expect = 5.641e-9 Identity = 37/138 (26.81%), Postives = 67/138 (48.55%), Query Frame = 0
Query: 910 SGKFELIDRILPKLKATGHRVLMFCQMTQCMTIIEDYFNYRGFKFLRLDGMTKSEDRADMLKIFNEKASDYFIFLLSTRAGGLGLNLQTADT--VVIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERI 1045
S K ++ I+ V +FC++ + +I+ Y ++ + + L+ E ++ L +N SD FI L STR +GLN+ + + +V++DS W+ H ++ I + V + RL+ SVEE I
Sbjct: 738 SAKLNKLNEIIIDAVKRKEHVAIFCEVKEMRDLIQIYLRHKFYSYTVLEPENSFECNSESLLSYN--MSDVFILLTSTRTSAIGLNVSSLNIKNIVLYDSSWD-HDGFRSNPWVQGITRSPGVVIHRLLCKGSVEESI 872
BLAST of homeotic gene vs. L. salmonis genes
Match: EMLSAG00000005883 (supercontig:LSalAtl2s:LSalAtl2s319:103877:107532:-1 gene:EMLSAG00000005883 transcript:EMLSAT00000005883 description:"maker-LSalAtl2s319-augustus-gene-1.32") HSP 1 Score: 120.939 bits (302), Expect = 1.028e-27 Identity = 153/629 (24.32%), Postives = 271/629 (43.08%), Query Frame = 0
Query: 578 EQAPMLVGGKLKEY--QVKGLEWLVSLYNNCLN---GILADEMGLGKTIQTIALI---TYLMERKKN-------MGP---------YLIIVPLSTLSNWALEFEKW--APACNVVSYKGSPAARRTAQNAMRGSKFNVLVTTYEYVIKD---------------------------KAMLSKIRWKYMIIDEGHRMKNHHCKLTQILNTFYTSNNRLLLTGTPLQNKLPELWALLNFLLPSIFKACNTFEQWFNAPFAITGEKVELNEEETILIIRRLHKVLRPFLLRRLKKDVESQ-------LPDK--VEYIVKCE----------MSGLQRTLYNHM----QEKG--VMKTDKINKGK-----------------------KGAKA--LMNTIMQLRKLCNHPFMYQPIEEAYAKH----------------------IGMPTDI-----------VTGPDVYR---SSGKFELIDRI--LPKLKATGHRVLMFCQMTQCMTIIEDYFNYRGFKFLRLDGMTKSEDRADMLKIFNEKASDY-FIFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARFKLNMDEKVIQAGR 1064
E+ P+L+ + + Q L WL L+ + GILAD+MGLGKT+ I+L+ L++ +K +G L++ P S +S W E +K + + N++ Y G A+R Q+A S++++++TTY ++ D + K+ W+ +I+DE H+++N K Q + + R +TGTP+QNK +L++L+ FL S F ++ W E +T R++ +++ LLRR K S LP K +E+ +K + S Q + N+M +EKG + DK ++G+ K KA L+ ++ LR++C HP + Q + ++ K I DI V+ P + SS +L++ + + + + + ++ Q T + I+E Y N G K + ++G + R D+++ FN + + I LLS AGG+GLNL + + + D WNP + QA DR +R+GQ V + + + N+VE +I + KL++ + V+ +
Sbjct: 566 EEDPLLLKKSISLFPHQRHALAWL--LWRETQHPPGGILADDMGLGKTLTMISLVLKSNELIKLQKKSEEDEEWLGTKEGLIRSKGTLVVCPASLISQWENEVKKKIKSDSLNILVYHG--ASR--GQSARSLSRYDLVITTYHTIMNDMKGALGESSKGKLEEMGAVSENTVGSKHIQVLKVAWERIILDEAHQIRNPKSKTAQAVCRLRGAR-RWCVTGTPIQNKELDLYSLIRFLRCSPFDEYRVWKTWV--------------ENKTSQGQTRMNTLIKSLLLRRTKDQKSSTTGNAIVDLPKKTIIEHSIKLKENEQKVYDKVFSLSQSAMINYMKKYHEEKGDSIDVNDKYSQGRPSSNNNPVDYTYKPPGSSLVSNPKDVKAHHLLVLLLXLRQICCHPVLIQSMLDSEVKSNEGIEDEDGEELDLISRMEEMSIFKKRDISNHEEEEKLLVVSNPVFDKDTPSSKILKLVEALNEIASKENSREKAVIVSQWTSMLNIVESYVNSLGMKSVAINGKVNVKHRGDIVEEFNSDSKNSPRIMLLSLGAGGVGLNLVGGNHLFLLDMHWNPQLEQQAXDRIYRVGQTRPVWIHKFLCENTVESKIHLLQQKKLSIADGVLTGAK 1173
BLAST of homeotic gene vs. L. salmonis genes
Match: EMLSAG00000010608 (supercontig:LSalAtl2s:LSalAtl2s705:284685:288095:1 gene:EMLSAG00000010608 transcript:EMLSAT00000010608 description:"augustus_masked-LSalAtl2s705-processed-gene-2.4") HSP 1 Score: 87.4261 bits (215), Expect = 5.893e-18 Identity = 50/148 (33.78%), Postives = 79/148 (53.38%), Query Frame = 0
Query: 929 RVLMFCQMTQCMTIIEDYFNYRGFKFLRLDGMTKSEDRADMLKIFNEKASDYFIFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARFKLNMDEKVIQAGRFNNRSTGSERRE 1076
+V++ Q T +++I + F+RLDG R ++L FN + I LLS +AGG+GLNL A+ +++ D WNP + Q DR +RIGQ+ V + + + NS+E+RILA K + + FN S+ + RE
Sbjct: 315 KVIIVSQFTSFLSMIHPILTRENYDFVRLDGTMSMRQRGEVLYTFNRGSPR--ILLLSLKAGGIGLNLIAANHLLLLDPAWNPADEDQCFDRIYRIGQEKPVVIYKYIVDNSIEDRILALQEHK-----RKLAKTAFNRNSSRNSLRE 455
BLAST of homeotic gene vs. SwissProt
Match: gi|19857556|sp|P25439.2|BRM_DROME (RecName: Full=ATP-dependent helicase brm; AltName: Full=Homeotic gene regulator; AltName: Full=Protein brahma) HSP 1 Score: 1497.26 bits (3875), Expect = 0.000e+0 Identity = 833/1493 (55.79%), Postives = 1007/1493 (67.45%), Query Frame = 0
Query: 25 GPHSPMPPPESPSPGMRPSPSPSPMTG-PPNSYPPTQ------------------GPPSDLQKLQNSINQMEERGMQNDPRYNQARQLHQNMMSRQGPPPGAPGAPPGAGPPGGPAGPPGQDKGQFQN-PQMLQLRAQIMAYRFLARNQPLPPQIAMAV---------------------------------------------SGKRPEGQGPPGAPPYGPSRPGGPPGSASPGGPPNMQAPAPGG--------------------------------------RGPTPNTTGPTGGTP---------------------------------GVAPTG----KPNRVTPVAKPAGIDPITLLQERENRLAARVAHRIDELSNLPVSMADDTRTKAEIELRALRLLNFQRQLRAEVVACTRRDTTLETAINVKAYKRTKRQGLREARATEKLEKQQRLEAERRRRQKHQEYLNAVLTHGRDLQNFHRNNLGKIQKLNKAVLNWHANHEREQKKEQERIEKERLRRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYINQLTDMVKQHKVEQVQKQKELRKKAKLEEQAGAM------LDESSQMSDVRVHVKELSTGKIIRGDNAPLASELESWLEKNPGFEQVPRDEDSDDSDGEEKP---ETTSSAEAILAKAKEEATKEDEGDGV---------------DYYTIAHTISEEITEQAPMLVGGKLKEYQVKGLEWLVSLYNNCLNGILADEMGLGKTIQTIALITYLMERKKNMGPYLIIVPLSTLSNWALEFEKWAPACNVVSYKGSPAARRTAQNAMRGSKFNVLVTTYEYVIKDKAMLSKIRWKYMIIDEGHRMKNHHCKLTQILNTFYTSNNRLLLTGTPLQNKLPELWALLNFLLPSIFKACNTFEQWFNAPFAITGEKVELNEEETILIIRRLHKVLRPFLLRRLKKDVESQLPDKVEYIVKCEMSGLQRTLYNHMQEKGVMKTD---KINKGKKGAKALMNTIMQLRKLCNHPFMYQPIEEAYAKHIGMPTDIVTGPDVYRSSGKFELIDRILPKLKATGHRVLMFCQMTQCMTIIEDYFNYRGFKFLRLDGMTKSEDRADMLKIFNEKASDYFIFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARFKLNMDEKVIQAGRFNNRSTGSERRELLQSIL-RADEEEEEENEVPDDEVINQMIARSEDEFEKFTQMDLDRRREEAALGPNRKDRLIQIKELPEFLLAEDDDDDE---EEEEEIVYGRGSRAKKETNYNDQLSDKEWLKVIGAEDEEFDDDDEDDEEIKKPGKRVKRKKREDEEVEDEFANQNRKKKKSSAKRLQKKMATLMQIVVQYKDQDERVLSEPFMKLPSKKELPDYYEVIKRPVDIARIMNKIADGKYEDVDAMEKDFVLMCANTQKYNEDGSLIYEDSIVLQSVFTNARERL 1346
GPH M P + P+ SP G PPN+ PTQ +L LQ +I+ MEE+G+Q DPRY+Q + K Q N Q+ LR QI AYR LARN+P+ Q+ A+ +G P+ PP + PYGP PG A P PP+MQ P G P + GP+GG P V P G KPNR+T VAKP G+DPITLLQERENR+AAR++ R+ EL LP +M++D R +A IELRALR+LNFQRQLR E V CTRRDTTLETA+N+K YKRTKRQGLREARATEKLEKQQ+LEAER+RRQKH E+L AVL HG+DL+ FHRNN ++ ++NKAV+N HAN EREQKKEQERIEKER+RRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYI+ LT MVKQHK +Q++K++E K+ ++ M +DE S ++D+RVHV E TGK + GD+AP+ L WL +PG++ + +EDS S+ + KP E ++ E KA+ ED D + YY+IAHTI E++ EQA ++V G LKEYQ+KGLEWLVSLYNN LNGILADEMGLGKTIQTI+L+TYLM+RKK MGPYLIIVPLSTL NW LEFEKWAPA VVSYKGSP RR QN MR +KFNVL+TTYEYVIKDKA+L+KI+WKYMIIDEGHRMKNHHCKLTQ+LNT Y + RLLLTGTPLQNKLPELWALLNFLLPSIFK+C+TFEQWFNAPFA TGEKVELNEEETILIIRRLHKVLRPFLLRRLKK+VE QLPDKVEYI+KC+MS LQR LY HMQ KGV+ TD K GK GAKALMNTI+QLRKLCNHPFM+Q IEE Y H G +V+GPD+YR SGKFEL+DRILPKLKAT HRVL+FCQMTQCMTIIEDY +R F +LRLDG TK+EDR ++L+ FN K SD F+FLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQ+NEVRVLRLMTVNSVEERILAAAR+KLNMDEKVIQAG F+ +STGSER++ LQ+IL + D EEEEENEVPDDE+IN MIARSE+E E F +MD +R++E+ + P R +RLI ELP++L +DD+ + + +E+ + GRGSR +KE +Y D L++KEWLK I E +++EE ++ +++K EE +D+ R+++++ KR +K+M +M V+++ +QD R LSEPFMKLPS++ LPDYYE+IKRPVDI +I+ +I D KY D++ +EKDF+ +C N Q YNE+ SLIY DSI LQ VF AR+R+
Sbjct: 85 GPHMGMQMPPTG-----PNMSPYQTHGMPPNA--PTQPCIVSPGGPPGGPPPPERSSQENLHALQRAIDSMEEKGLQEDPRYSQLLAMR------------------------------ATSKHQHLNGNQVNLLRTQITAYRLLARNKPISMQMQQALQAAQQQPPPGPPIGPPGAPGGPPPGSQHAGQPPVPPQQQQQPPPSAGTPPQCSTPPASNPYGPPVPGQKMQVAPP--PPHMQQGQPLPPQPPQVGGPPPIQQQQPPQQQQQQSQPPPPEPHQHQLPNGGKPLSMGPSGGQPLIPSSPMQPQVRGTLPGMPPGSQVPQPGGGPQRQVPPAGMPMPKPNRITTVAKPVGLDPITLLQERENRIAARISLRMQELQRLPATMSEDLRLQAAIELRALRVLNFQRQLRMEFVQCTRRDTTLETALNIKLYKRTKRQGLREARATEKLEKQQKLEAERKRRQKHLEFLAAVLQHGKDLREFHRNNKAQLARMNKAVMNHHANAEREQKKEQERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYISNLTQMVKQHKDDQMKKKEEEGKRLIQFKKELLMSGEYIGIDEGSIVADMRVHVVEQCTGKKLTGDDAPMLKHLHRWLNMHPGWDWIDDEEDSCGSNDDHKPKVEEQPTATEDATDKAQATGNDEDAKDLITKAKVEDDEYRTEEQTYYSIAHTIHEKVVEQASIMVNGTLKEYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTISLVTYLMDRKKVMGPYLIIVPLSTLPNWVLEFEKWAPAVGVVSYKGSPQGRRLLQNQMRATKFNVLLTTYEYVIKDKAVLAKIQWKYMIIDEGHRMKNHHCKLTQVLNTHYIAPYRLLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVEHQLPDKVEYIIKCDMSALQRVLYKHMQSKGVLLTDGSEKGKHGKGGAKALMNTIVQLRKLCNHPFMFQHIEEKYCDHTG-GHGVVSGPDLYRVSGKFELLDRILPKLKATNHRVLLFCQMTQCMTIIEDYLGWRQFGYLRLDGTTKAEDRGELLRKFNAKGSDVFVFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQRNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERQQFLQTILHQDDNEEEEENEVPDDEMINMMIARSEEEIEIFKRMDAERKKEDEEIHPGR-ERLIDESELPDWLTKDDDEVERFHYQYDEDTILGRGSRQRKEVDYTDSLTEKEWLKAIDDGAEF-----DEEEEEDDSKRKRRKRKNRKEESDDDSLILKRRRRQNLDKRSKKQMHKIMSAVIKH-NQDGRTLSEPFMKLPSRQRLPDYYEIIKRPVDIKKILQRIEDCKYADLNELEKDFMQLCQNAQIYNEEASLIYLDSIALQKVFVGARQRI 1530
BLAST of homeotic gene vs. SwissProt
Match: gi|116242792|sp|P51532.2|SMCA4_HUMAN (RecName: Full=Transcription activator BRG1; AltName: Full=ATP-dependent helicase SMARCA4; AltName: Full=BRG1-associated factor 190A; Short=BAF190A; AltName: Full=Mitotic growth and transcription activator; AltName: Full=Protein BRG-1; AltName: Full=Protein brahma homolog 1; AltName: Full=SNF2-beta; AltName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 4) HSP 1 Score: 1403.65 bits (3632), Expect = 0.000e+0 Identity = 739/1268 (58.28%), Postives = 916/1268 (72.24%), Query Frame = 0
Query: 196 PPNMQAPAPGGRGPTPNTTGPTGGTPGVAPTGKPNRVTPVAKPAGIDPITLLQERENRLAARVAHRIDELSNLPVSMADDTRTKAEIELRALRLLNFQRQLRAEVVACTRRDTTLETAINVKAYKRTKRQGLREARATEKLEKQQRLEAERRRRQKHQEYLNAVLTHGRDLQNFHRNNLGKIQKLNKAVLNWHANHEREQKKEQERIEKERLRRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYINQLTDMVKQHKVEQVQKQKELRKKAKLEEQA----------GAMLDESSQMSDVRVHVKELSTGKIIRGDNAPLASELESWLEKNPGFEQVPR-------------------------------------DEDSDDSDGEEKPETTSSAEAILAKAKEEATKEDEGDGVD---------YYTIAHTISEEITEQAPMLVGGKLKEYQVKGLEWLVSLYNNCLNGILADEMGLGKTIQTIALITYLMERKKNMGPYLIIVPLSTLSNWALEFEKWAPACNVVSYKGSPAARRTAQNAMRGSKFNVLVTTYEYVIKDKAMLSKIRWKYMIIDEGHRMKNHHCKLTQILNTFYTSNNRLLLTGTPLQNKLPELWALLNFLLPSIFKACNTFEQWFNAPFAITGEKVELNEEETILIIRRLHKVLRPFLLRRLKKDVESQLPDKVEYIVKCEMSGLQRTLYNHMQEKGVMKTD---KINKGKKGAKALMNTIMQLRKLCNHPFMYQPIEEAYAKHIGMPTDIVTGPDVYRSSGKFELIDRILPKLKATGHRVLMFCQMTQCMTIIEDYFNYRGFKFLRLDGMTKSEDRADMLKIFNEKASDYFIFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARFKLNMDEKVIQAGRFNNRSTGSERRELLQSILRADEEEE---------------------------------EENEVPDDEVINQMIARSEDEFEKFTQMDLDRRREEAALGPNRKDRLIQIKELPEFLLAEDDDDDE---EEEEEIVYGRGSRAKKETNYNDQLSDKEWLKVIGAEDEEFDDDDEDDEEIKKPGKRVKRKKREDEEV-------------EDEFANQNRKKKKSSAKRLQ-------KKMATLMQIVVQYKDQDE-RVLSEPFMKLPSKKELPDYYEVIKRPVDIARIMNKIADGKYEDVDAMEKDFVLMCANTQKYNEDGSLIYEDSIVLQSVFTNARERLD 1347
PP Q+P P P V K +R+TP+ KP G+DP+ +LQERE RL AR+AHRI EL NLP S+A D RTKA IEL+ALRLLNFQRQLR EVV C RRDT LETA+N KAYKR+KRQ LREAR TEKLEKQQ++E ER+RRQKHQEYLN++L H +D + +HR+ GKIQKL KAV +HAN EREQKKE ERIEKER+RRLMAEDEEGYRKLIDQKKDKRLA+LL QTDEY+ LT++V+QHK QV K+K+ +KK K E A G LDE+SQMSD+ V V + +GKI+ G +AP A +LE+WLE NPG+E PR D DSDD + A I+ AK++ D+ GV YY +AH ++E + +Q+ ++V G LK+YQ+KGLEWLVSLYNN LNGILADEMGLGKTIQTIALITYLME K+ GP+LIIVPLSTLSNWA EF+KWAP+ VSYKGSPAARR +R KFNVL+TTYEY+IKDK +L+KIRWKYMI+DEGHRMKNHHCKLTQ+LNT Y + RLLLTGTPLQNKLPELWALLNFLLP+IFK+C+TFEQWFNAPFA+TGEKV+LNEEETILIIRRLHKVLRPFLLRRLKK+VE+QLP+KVEY++KC+MS LQR LY HMQ KGV+ TD K KGK G K LMNTIMQLRK+CNHP+M+Q IEE++++H+G IV G D+YR+SGKFEL+DRILPKL+AT H+VL+FCQMT MTI+EDYF YRGFK+LRLDG TK+EDR +LK FNE S+YFIFLLSTRAGGLGLNLQ+ADTV+IFDSDWNPHQDLQAQDRAHRIGQ+NEVRVLRL TVNSVEE+ILAAA++KLN+D+KVIQAG F+ +S+ ERR LQ+IL +E++E EE+EVPDDE +NQMIAR E+EF+ F +MDLDRRREEA P RK RL++ ELP +++ +D + + EEEEE ++GRGSR +KE +Y+D L++K+WLK I E E +EE+++ K+ RK++ D + +D+ + + +K+ + A++L KKM ++ V++YKD R LSE F++LPS+KELP+YYE+I++PVD +I +I + KY ++ +EKD +L+C N Q +N +GSLIYEDSIVLQSVFT+ R++++
Sbjct: 327 PPQTQSPG-----------QPAQPAPMVPLHQKQSRITPIQKPRGLDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIGPDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEESGSEEEEEEEEEEQPQAAQPPTLPVEEKKKIPDPDSDDV-------SEVDARHIIENAKQDV---DDEYGVSQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDESRHCSTGSGSASFAHTAPPPAGVNPDLEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMRMDLDRRREEAR-NPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYSDSLTEKQWLKAIEEGTLE-----EIEEEVRQ--KKSSRKRKRDSDAGSSTPTTSTRSRDKDDESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIE 1565 HSP 2 Score: 87.0409 bits (214), Expect = 1.039e-15 Identity = 73/189 (38.62%), Postives = 88/189 (46.56%), Query Frame = 0
Query: 40 MRPSPSPSPMTGPPNSYPPTQGP---PSD-LQKLQNSINQMEERGMQNDPRYNQARQL------HQNMMSRQGPPPG-----APGAP-------------PGAGPPGGP---AGPPG--------QDKGQ-------FQNPQMLQLRAQIMAYRFLARNQPLPPQIAMAVSGKRP----EGQGPPGAPP 178
M PSP P P G P PTQGP P D + ++ + M E+GM +DPRYNQ + + H M GPPP + G P P +GP GP +GP G Q GQ F Q+ QLRAQIMAY+ LAR QPLP + MAV GKRP + Q P PP
Sbjct: 43 MGPSPGP-PSAGHPI---PTQGPGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGM----GPPPSPMDQHSQGYPSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQLRAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPP 223
BLAST of homeotic gene vs. SwissProt
Match: gi|212276472|sp|P51531.2|SMCA2_HUMAN (RecName: Full=Probable global transcription activator SNF2L2; AltName: Full=ATP-dependent helicase SMARCA2; AltName: Full=BRG1-associated factor 190B; Short=BAF190B; AltName: Full=Protein brahma homolog; Short=hBRM; AltName: Full=SNF2-alpha; AltName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2) HSP 1 Score: 1403.27 bits (3631), Expect = 0.000e+0 Identity = 781/1489 (52.45%), Postives = 986/1489 (66.22%), Query Frame = 0
Query: 40 MRPSPSPSPMTGPPNSYPPTQGPPSDLQKLQNSINQMEERGMQND-------------------PRYNQARQLHQNMMSRQGPPPGAP---------GAP---------PGAGPPGGPAG--PPGQDKGQFQNPQMLQLRAQIMAYRFLARNQPLPPQIAMAVSGK---------------------------------------------------RPEGQGPPGAPPYGPSRPGGPPGSASPGGPPNMQAPAPGGRG--------------------PTPNTTGPTGGTPGVAPTGKPNRVTPVAKPAGIDPITLLQERENRLAARVAHRIDELSNLPVSMADDTRTKAEIELRALRLLNFQRQLRAEVVACTRRDTTLETAINVKAYKRTKRQGLREARATEKLEKQQRLEAERRRRQKHQEYLNAVLTHGRDLQNFHRNNLGKIQKLNKAVLNWHANHEREQKKEQERIEKERLRRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYINQLTDMVKQHKVEQ--------VQKQKELRKKAKLEEQA----GAMLDESSQMSDVRVHVKELSTGKIIRGDNAPLASELESWLEKNPGFEQVPRDEDSD-------------------------DSDGEEKPETTSSAEAILAKAKEEATKE-----DEGDGVDYYTIAHTISEEITEQAPMLVGGKLKEYQVKGLEWLVSLYNNCLNGILADEMGLGKTIQTIALITYLMERKKNMGPYLIIVPLSTLSNWALEFEKWAPACNVVSYKGSPAARRTAQNAMRGSKFNVLVTTYEYVIKDKAMLSKIRWKYMIIDEGHRMKNHHCKLTQILNTFYTSNNRLLLTGTPLQNKLPELWALLNFLLPSIFKACNTFEQWFNAPFAITGEKVELNEEETILIIRRLHKVLRPFLLRRLKKDVESQLPDKVEYIVKCEMSGLQRTLYNHMQEKGVMKTD---KINKGKKGAKALMNTIMQLRKLCNHPFMYQPIEEAYAKHIGMPTDIVTGPDVYRSSGKFELIDRILPKLKATGHRVLMFCQMTQCMTIIEDYFNYRGFKFLRLDGMTKSEDRADMLKIFNEKASDYFIFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARFKLNMDEKVIQAGRFNNRSTGSERRELLQSILRADEEEEEENEVPDDEVINQMIARSEDEFEKFTQMDLDRRREEAALGPNRKDRLIQIKELPEFLLAEDDDDDE---EEEEEIVYGRGSRAKKETNYNDQLSDKEWLKVIGAEDEEFDDDDEDDEEIKKPGKRVKRKKREDEEVEDEFANQNRKKKKSSAK------RLQKKMATLMQIVVQYKDQ------------------DERVLSEPFMKLPSKKELPDYYEVIKRPVDIARIMNKIADGKYEDVDAMEKDFVLMCANTQKYNEDGSLIYEDSIVLQSVFTNARERL 1346
M PSP P ++ P + T P + ++ I+ + ++G+ D P + Q Q MS P GAP G P PGA PG P P + F Q+ QLRAQI+AY+ LAR QPLP + +AV GK RP G GP + GPS P P PAPGGR P P P +P + K +R++P+ KP G+DP+ +LQERE RL AR+AHRI EL NLP S+ D RTKA +EL+ALRLLNFQRQLR EVVAC RRDTTLETA+N KAYKR+KRQ LREAR TEKLEKQQ++E ER+RRQKHQEYLN++L H +D + +HR+ GKIQKL+KAV WHAN EREQKKE ERIEKER+RRLMAEDEEGYRKLIDQKKD+RLA+LL QTDEY+ LT++V +HK Q +++K+ + A+ E A G +DESSQMSD+ V V TGK++ G AP AS+L++WLE NPG+E PR + + D + EE E A+ I+ AK++ E YYT+AH ISE + +Q+ +L+ G LK YQ++GLEW+VSLYNN LNGILADEMGLGKTIQTIALITYLME K+ GPYLIIVPLSTLSNW EF+KWAP+ +SYKG+PA RR+ +R KFNVL+TTYEY+IKDK +L+KIRWKYMI+DEGHRMKNHHCKLTQ+LNT Y + R+LLTGTPLQNKLPELWALLNFLLP+IFK+C+TFEQWFNAPFA+TGE+V+LNEEETILIIRRLHKVLRPFLLRRLKK+VESQLP+KVEY++KC+MS LQ+ LY HMQ KG++ TD K KGK GAK LMNTIMQLRK+CNHP+M+Q IEE++A+H+G ++ G ++YR+SGKFEL+DRILPKL+AT HRVL+FCQMT MTI+EDYF +R F +LRLDG TKSEDRA +LK FNE S YFIFLLSTRAGGLGLNLQ ADTVVIFDSDWNPHQDLQAQDRAHRIGQ+NEVRVLRL TVNSVEE+ILAAA++KLN+D+KVIQAG F+ +S+ ERR LQ+IL +EE EEE+EVPDDE +NQMIAR E+EF+ F +MD+DRRRE+A P RK RL++ ELP +++ +D + + EEEEE ++GRGSR +++ +Y+D L++K+WL+ I E + +E +EE++ ++ +R +D ED + R+ + + K +L K+M ++ V+ YKD+ R LSE F++LPS+KELP+YYE+I++PVD +I +I + KY + +EKD +L+C N Q +N +GS IYEDSIVLQSVF +AR+++
Sbjct: 44 MGPSPGPPSVSHPMPTMGSTDFPQEGMHQMHKPIDGIHDKGIVEDIHCGSMKGTGMRPPHPGMGPPQSPMDQHSQGYMSPHPSPLGAPEHVSSPMSGGGPTPPQMPPSQPGALIPGDPQAMSQPNRGPSPFSPVQLHQLRAQILAYKMLARGQPLPETLQLAVQGKRTLPGLQQQQQQQQQQQQQQQQQQQQQQQPQQQPPQPQTQQQQQPALVNYNRPSGPGPELS---GPSTPQKLP------------VPAPGGRPSPAPPAAAQPPAAAVPGPSVPQP---APGQPSPVLQLQQKQSRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELENLPGSLPPDLRTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHANTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVWEHKQAQAAKEKKKRRRRKKKAEENAEGGESALGPDGEPIDESSQMSDLPVKVTHTETGKVLFGPEAPKASQLDAWLEMNPGYEVAPRSDSEESDSDYEEEDEEEESSRQETEEKILLDPNSEEVSE--KDAKQIIETAKQDVDDEYSMQYSARGSQSYYTVAHAISERVEKQSALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDRRREDAR-NPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQWLRAI-----EDGNLEEMEEEVRLKKRKRRRNVDKDPAKEDVEKAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVINYKDRCNVEKVPSNSQLEIEGNSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKI 1506
BLAST of homeotic gene vs. SwissProt
Match: gi|123790047|sp|Q3TKT4.1|SMCA4_MOUSE (RecName: Full=Transcription activator BRG1; AltName: Full=ATP-dependent helicase SMARCA4; AltName: Full=BRG1-associated factor 190A; Short=BAF190A; AltName: Full=Protein brahma homolog 1; AltName: Full=SNF2-beta; AltName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 4) HSP 1 Score: 1398.65 bits (3619), Expect = 0.000e+0 Identity = 740/1234 (59.97%), Postives = 916/1234 (74.23%), Query Frame = 0
Query: 196 PPNMQAPAPGGRGPTPNTTGPTGGTPGVAPTGKPNRVTPVAKPAGIDPITLLQERENRLAARVAHRIDELSNLPVSMADDTRTKAEIELRALRLLNFQRQLRAEVVACTRRDTTLETAINVKAYKRTKRQGLREARATEKLEKQQRLEAERRRRQKHQEYLNAVLTHGRDLQNFHRNNLGKIQKLNKAVLNWHANHEREQKKEQERIEKERLRRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYINQLTDMVKQHKVEQVQKQKELRKKAKLEEQA----------GAMLDESSQMSDVRVHVKELSTGKIIRGDNAPLASELESWLEKNPGFEQVPR-------------------------------------DEDSDDSDGEEKPETTSSAEAILAKAKEEATKEDEGDGVD---------YYTIAHTISEEITEQAPMLVGGKLKEYQVKGLEWLVSLYNNCLNGILADEMGLGKTIQTIALITYLMERKKNMGPYLIIVPLSTLSNWALEFEKWAPACNVVSYKGSPAARRTAQNAMRGSKFNVLVTTYEYVIKDKAMLSKIRWKYMIIDEGHRMKNHHCKLTQILNTFYTSNNRLLLTGTPLQNKLPELWALLNFLLPSIFKACNTFEQWFNAPFAITGEKVELNEEETILIIRRLHKVLRPFLLRRLKKDVESQLPDKVEYIVKCEMSGLQRTLYNHMQEKGVMKTD---KINKGKKGAKALMNTIMQLRKLCNHPFMYQPIEEAYAKHIGMPTDIVTGPDVYRSSGKFELIDRILPKLKATGHRVLMFCQMTQCMTIIEDYFNYRGFKFLRLDGMTKSEDRADMLKIFNEKASDYFIFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARFKLNMDEKVIQAGRFNNRSTGSERRELLQSILRADEEEEEENEVPDDEVINQMIARSEDEFEKFTQMDLDRRREEAALGPNRKDRLIQIKELPEFLLAEDDDDDE---EEEEEIVYGRGSRAKKETNYNDQLSDKEWLKVIGAEDEEFDDDDEDDEEIKKPGKRVKRKKREDEEV-------------EDEFANQNRKKKKSSAKRLQ-------KKMATLMQIVVQYKDQDERVLSEPFMKLPSKKELPDYYEVIKRPVDIARIMNKIADGKYEDVDAMEKDFVLMCANTQKYNEDGSLIYEDSIVLQSVFTNARERLD 1347
PP Q+P P P V K +R+TP+ KP G+DP+ +LQERE RL AR+AHRI EL NLP S+A D RTKA IEL+ALRLLNFQRQLR EVV C RRDT LETA+N KAYKR+KRQ LREAR TEKLEKQQ++E ER+RRQKHQEYLN++L H +D + +HR+ GK+QKL KAV +HAN EREQKKE ERIEKER+RRLMAEDEEGYRKLIDQKKDKRLA+LL QTDEY+ LT++V+QHK QV K+K+ +KK K E A G LDE+SQMSD+ V V + +GKI+ G +AP A +LE+WLE NPG+E PR D DSDD + A I+ AK++ D+ GV YY +AH ++E + +Q+ ++V G LK+YQ+KGLEWLVSLYNN LNGILADEMGLGKTIQTIALITYLME K+ GP+LIIVPLSTLSNWA EF+KWAP+ VSYKGSPAARR +R KFNVL+TTYEY+IKDK +L+KIRWKYMI+DEGHRMKNHHCKLTQ+LNT Y + RLLLTGTPLQNKLPELWALLNFLLP+IFK+C+TFEQWFNAPFA+TGEKV+LNEEETILIIRRLHKVLRPFLLRRLKK+VE+QLP+KVEY++KC+MS LQR LY HMQ KGV+ TD K KGK G K LMNTIMQLRK+CNHP+M+Q IEE++++H+G IV G D+YR+SGKFEL+DRILPKL+AT H+VL+FCQMT MTI+EDYF YRGFK+LRLDG TK+EDR +LK FNE S+YFIFLLSTRAGGLGLNLQ+ADTV+IFDSDWNPHQDLQAQDRAHRIGQ+NEVRVLRL TVNSVEE+ILAAA++KLN+D+KVIQAG F+ +S+ ERR LQ+IL +E++EEE+EVPDDE +NQMIAR E+EF+ F +MDLDRRREEA P RK RL++ ELP +++ +D + + EEEEE ++GRGSR +KE +Y+D L++K+WLK I E E +EE+++ K+ RK++ D E +DE + + +K+ + A++L KKM ++ V++YKD R LSE F++LPS+KELP+YYE+I++PVD +I +I + KY ++ +EKD +L+C N Q +N +GSLIYEDSIVLQSVFT+ R++++
Sbjct: 327 PPQTQSPG-----------QPAQPAPLVPLHQKQSRITPIQKPRGLDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFREYHRSVTGKLQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIGPDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEESGSEEEEEEEEEEQPQPAQPPTLPVEEKKKIPDPDSDDV-------SEVDARHIIENAKQDV---DDEYGVSQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDEEEDEVPDDETVNQMIARHEEEFDLFMRMDLDRRREEAR-NPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYSDSLTEKQWLKAIEEGTLE-----EIEEEVRQ--KKSSRKRKRDSEAGSSTPTTSTRSRDKDEESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIE 1531 HSP 2 Score: 85.8853 bits (211), Expect = 2.207e-15 Identity = 71/185 (38.38%), Postives = 87/185 (47.03%), Query Frame = 0
Query: 40 MRPSPSPSPMTGPPNSYPPTQGP---PSD-LQKLQNSINQMEERGMQNDPRYNQARQLHQNMMSRQG--PPPG-----APGAP-------------PGAGPPGGP---AGPPG--------QDKGQ-------FQNPQMLQLRAQIMAYRFLARNQPLPPQIAMAVSGKRP----EGQGPPGAPP 178
M PSP P P G P PTQGP P D + ++ + M E+GM +DPRYNQ + + + G PPP + G P P +GP GP +GP G Q GQ F Q+ QLRAQIMAY+ LAR QPLP + MAV GKRP + Q P PP
Sbjct: 43 MGPSPGP-PSAGHPM---PTQGPGGYPQDNMHQMHKPMESMHEKGMPDDPRYNQMKGMGMRSGAHTGMAPPPSPMDQHSQGYPSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGSDPQALGQQNRGPTPFNQNQLHQLRAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPP 223
BLAST of homeotic gene vs. SwissProt
Match: gi|81914599|sp|Q8K1P7.1|SMCA4_RAT (RecName: Full=Transcription activator BRG1; AltName: Full=ATP-dependent helicase SMARCA4; AltName: Full=BRG1-associated factor 190A; Short=BAF190A; AltName: Full=Protein brahma homolog 1; AltName: Full=SNF2-beta; AltName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 4) HSP 1 Score: 1396.33 bits (3613), Expect = 0.000e+0 Identity = 739/1234 (59.89%), Postives = 915/1234 (74.15%), Query Frame = 0
Query: 196 PPNMQAPAPGGRGPTPNTTGPTGGTPGVAPTGKPNRVTPVAKPAGIDPITLLQERENRLAARVAHRIDELSNLPVSMADDTRTKAEIELRALRLLNFQRQLRAEVVACTRRDTTLETAINVKAYKRTKRQGLREARATEKLEKQQRLEAERRRRQKHQEYLNAVLTHGRDLQNFHRNNLGKIQKLNKAVLNWHANHEREQKKEQERIEKERLRRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYINQLTDMVKQHKVEQVQKQKELRKKAKLEEQA----------GAMLDESSQMSDVRVHVKELSTGKIIRGDNAPLASELESWLEKNPGFEQVPR-------------------------------------DEDSDDSDGEEKPETTSSAEAILAKAKEEATKEDEGDGVD---------YYTIAHTISEEITEQAPMLVGGKLKEYQVKGLEWLVSLYNNCLNGILADEMGLGKTIQTIALITYLMERKKNMGPYLIIVPLSTLSNWALEFEKWAPACNVVSYKGSPAARRTAQNAMRGSKFNVLVTTYEYVIKDKAMLSKIRWKYMIIDEGHRMKNHHCKLTQILNTFYTSNNRLLLTGTPLQNKLPELWALLNFLLPSIFKACNTFEQWFNAPFAITGEKVELNEEETILIIRRLHKVLRPFLLRRLKKDVESQLPDKVEYIVKCEMSGLQRTLYNHMQEKGVMKTD---KINKGKKGAKALMNTIMQLRKLCNHPFMYQPIEEAYAKHIGMPTDIVTGPDVYRSSGKFELIDRILPKLKATGHRVLMFCQMTQCMTIIEDYFNYRGFKFLRLDGMTKSEDRADMLKIFNEKASDYFIFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARFKLNMDEKVIQAGRFNNRSTGSERRELLQSILRADEEEEEENEVPDDEVINQMIARSEDEFEKFTQMDLDRRREEAALGPNRKDRLIQIKELPEFLLAEDDDDDE---EEEEEIVYGRGSRAKKETNYNDQLSDKEWLKVIGAEDEEFDDDDEDDEEIKKPGKRVKRKKREDEEV-------------EDEFANQNRKKKKSSAKRLQ-------KKMATLMQIVVQYKDQDERVLSEPFMKLPSKKELPDYYEVIKRPVDIARIMNKIADGKYEDVDAMEKDFVLMCANTQKYNEDGSLIYEDSIVLQSVFTNARERLD 1347
PP Q+P P P V K +R+TP+ KP G+DP+ +LQERE RL AR+ HRI EL NLP S+A D RTKA IEL+ALRLLNFQRQLR EVV C RRDT LETA+N KAYKR+KRQ LREAR TEKLEKQQ++E ER+RRQKHQEYLN++L H +D + +HR+ GK+QKL KAV +HAN EREQKKE ERIEKER+RRLMAEDEEGYRKLIDQKKDKRLA+LL QTDEY+ LT++V+QHK QV K+K+ +KK K E A G LDE+SQMSD+ V V + +GKI+ G +AP A +LE+WLE NPG+E PR D DSDD + A I+ AK++ D+ GV YY +AH ++E + +Q+ ++V G LK+YQ+KGLEWLVSLYNN LNGILADEMGLGKTIQTIALITYLME K+ GP+LIIVPLSTLSNWA EF+KWAP+ VSYKGSPAARR +R KFNVL+TTYEY+IKDK +L+KIRWKYMI+DEGHRMKNHHCKLTQ+LNT Y + RLLLTGTPLQNKLPELWALLNFLLP+IFK+C+TFEQWFNAPFA+TGEKV+LNEEETILIIRRLHKVLRPFLLRRLKK+VE+QLP+KVEY++KC+MS LQR LY HMQ KGV+ TD K KGK G K LMNTIMQLRK+CNHP+M+Q IEE++++H+G IV G D+YR+SGKFEL+DRILPKL+AT H+VL+FCQMT MTI+EDYF YRGFK+LRLDG TK+EDR +LK FNE S+YFIFLLSTRAGGLGLNLQ+ADTV+IFDSDWNPHQDLQAQDRAHRIGQ+NEVRVLRL TVNSVEE+ILAAA++KLN+D+KVIQAG F+ +S+ ERR LQ+IL +E++EEE+EVPDDE +NQMIAR E+EF+ F +MDLDRRREEA P RK RL++ ELP +++ +D + + EEEEE ++GRGSR +KE +Y+D L++K+WLK I E E +EE+++ K+ RK++ D E +DE + + +K+ + A++L KKM ++ V++YKD R LSE F++LPS+KELP+YYE+I++PVD +I +I + KY ++ +EKD +L+C N Q +N +GSLIYEDSIVLQSVFT+ R++++
Sbjct: 327 PPQTQSPG-----------QPAQPAPLVPLHQKQSRITPIQKPRGLDPVEILQEREYRLQARIVHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFREYHRSVTGKLQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIGPDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEESGSEEEEEEEEEEQPQPAQPPTLPVEEKKKIPDPDSDDV-------SEVDARHIIENAKQDV---DDEYGVSQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDEEEDEVPDDETVNQMIARHEEEFDLFMRMDLDRRREEAR-NPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYSDSLTEKQWLKAIEEGTLE-----EIEEEVRQ--KKSSRKRKRDSEAGSSTPTTSTRSRDKDEESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIE 1531 HSP 2 Score: 86.6557 bits (213), Expect = 1.212e-15 Identity = 73/189 (38.62%), Postives = 88/189 (46.56%), Query Frame = 0
Query: 40 MRPSPSPSPMTGPPNSYPPTQGP---PSD-LQKLQNSINQMEERGMQNDPRYNQARQL------HQNMMSRQGPPPG-----APGAP-------------PGAGPPGGP---AGPPG--------QDKGQ-------FQNPQMLQLRAQIMAYRFLARNQPLPPQIAMAVSGKRP----EGQGPPGAPP 178
M PSP P P G P PTQGP P D + ++ + M E+GM +DPRYNQ + + H M GPPP + G P P +GP GP +GP G Q GQ F Q+ QLRAQIMAY+ LAR QPLP + MAV GKRP + Q P PP
Sbjct: 43 MGPSPGP-PSAGHPM---PTQGPGGYPQDNMHQMHKPMESMHEKGMPDDPRYNQMKGMGMRSGAHTGM----GPPPSPMDQHSQGYPSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGSDPQALGQQNRGPTPFNQNQLHQLRAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPP 223
BLAST of homeotic gene vs. SwissProt
Match: gi|288559138|sp|A7Z019.1|SMCA4_BOVIN (RecName: Full=Transcription activator BRG1; AltName: Full=ATP-dependent helicase SMARCA4; AltName: Full=BRG1-associated factor 190A; Short=BAF190A; AltName: Full=Protein brahma homolog 1; AltName: Full=SNF2-beta; AltName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 4) HSP 1 Score: 1394.79 bits (3609), Expect = 0.000e+0 Identity = 739/1235 (59.84%), Postives = 916/1235 (74.17%), Query Frame = 0
Query: 196 PPNMQAPAPGGRGPTPNTTGPTGGTPGVAPTGKPNRVTPVAKPAGIDPITLLQERENRLAARVAHRIDELSNLPVSMADDTRTKAEIELRALRLLNFQRQLRAEVVACTRRDTTLETAINVKAYKRTKRQGLREARATEKLEKQQRLEAERRRRQKHQEYLNAVLTHGRDLQNFHRNNLGKIQKLNKAVLNWHANHEREQKKEQERIEKERLRRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYINQLTDMVKQHKVEQVQKQKELRKKAKLEEQA----------GAMLDESSQMSDVRVHVKELSTGKIIRGDNAPLASELESWLEKNPGFEQVPR-------------------------------------DEDSDDSDGEEKPETTSSAEAILAKAKEEATKEDEGDGVD---------YYTIAHTISEEITEQAPMLVGGKLKEYQVKGLEWLVSLYNNCLNGILADEMGLGKTIQTIALITYLMERKKNMGPYLIIVPLSTLSNWALEFEKWAPACNVVSYKGSPAARRTAQNAMRGSKFNVLVTTYEYVIKDKAMLSKIRWKYMIIDEGHRMKNHHCKLTQILNTFYTSNNRLLLTGTPLQNKLPELWALLNFLLPSIFKACNTFEQWFNAPFAITGEKVELNEEETILIIRRLHKVLRPFLLRRLKKDVESQLPDKVEYIVKCEMSGLQRTLYNHMQEKGVMKTD---KINKGKKGAKALMNTIMQLRKLCNHPFMYQPIEEAYAKHIGMPTDIVTGPDVYRSSGKFELIDRILPKLKATGHRVLMFCQMTQCMTIIEDYFNYRGFKFLRLDGMTKSEDRADMLKIFNEKASDYFIFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARFKLNMDEKVIQAGRFNNRSTGSERRELLQSILRADEEEEEENEVPDDEVINQMIARSEDEFEKFTQMDLDRRREEAALGPNRKDRLIQIKELPEFLLAEDDDDDE---EEEEEIVYGRGSRAKKETNYNDQLSDKEWLKVIGAEDEEFDDDDEDDEEIKKPGKRVKRKKREDEEV-------------EDEFANQNRKKKKSSAKRLQ-------KKMATLMQIVVQYKDQDE-RVLSEPFMKLPSKKELPDYYEVIKRPVDIARIMNKIADGKYEDVDAMEKDFVLMCANTQKYNEDGSLIYEDSIVLQSVFTNARERLD 1347
PP Q+P P P V K +R+TP+ KP G+DP+ +LQERE RL AR+AHRI EL NLP S+A D RTKA IEL+ALRLLNFQRQLR EVV C RRDT LETA+N KAYKR+KRQ LREAR TEKLEKQQ++E ER+RRQKHQEYLN++L H +D + +HR+ GKIQKL KAV +HAN EREQKKE ERIEKER+RRLMAEDEEGYRKLIDQKKDKRLA+LL QTDEY+ LT++V+QHK QV K+K+ +KK K E A G LDE+SQMSD+ V V + +GKI+ G +AP A +LE+WLE NPG+E PR D DSDD + A I+ AK++ D+ GV YY +AH ++E + +Q+ ++V G LK+YQ+KGLEWLVSLYNN LNGILADEMGLGKTIQTIALITYLME K+ GP+LIIVPLSTLSNWA EF+KWAP+ VSYKGSPAARR +R KFNVL+TTYEY+IKDK +L+KIRWKYMI+DEGHRMKNHHCKLTQ+LNT Y + RLLLTGTPLQNKLPELWALLNFLLP+IFK+C+TFEQWFNAPFA+TGEKV+LNEEETILIIRRLHKVLRPFLLRRLKK+VE+QLP+KVEY++KC+MS LQR LY HMQ KGV+ TD K KGK G K LMNTIMQLRK+CNHP+M+Q IEE++++H+G IV G D+YR+SGKFEL+DRILPKL+AT H+VL+FCQMT MTI+EDYF YRGFK+LRLDG TK+EDR +LK FNE S+YFIFLLSTRAGGLGLNLQ+ADTV+IFDSDWNPHQDLQAQDRAHRIGQ+NEVRVLRL TVNSVEE+ILAAA++KLN+D+KVIQAG F+ +S+ ERR LQ+IL +E++EEE+EVPDDE +NQMIAR E+EF+ F +MDLDRRREEA P RK RL++ ELP +++ +D + + EEEEE ++GRGSR +KE +Y+D L++K+WLK I E E +EE+++ K+ RK++ D + +D+ + + +K+ + A++L KKM ++ V++YKD R LSE F++LPS+KELP+YYE+I++PVD +I +I + KY ++ +EKD +L+C N Q +N +GSLIYEDSIVLQSVFT+ R++++
Sbjct: 319 PPQTQSPG-----------QPAQPAPMVPLHQKQSRITPIQKPRGLDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIGPDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEESGSEEEEEEEEEEQPQPAQPPTLPVEEKKKIPDPDSDDV-------SEVDARHIIENAKQDV---DDEYGVSQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDEEEDEVPDDETVNQMIARHEEEFDLFMRMDLDRRREEAR-NPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYSDSLTEKQWLKAIEEGTLE-----EIEEEVRQ--KKSSRKRKRDSDAGPSTPTTSTRSRDKDDESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIE 1524
BLAST of homeotic gene vs. SwissProt
Match: gi|81884744|sp|Q6DIC0.1|SMCA2_MOUSE (RecName: Full=Probable global transcription activator SNF2L2; AltName: Full=ATP-dependent helicase SMARCA2; AltName: Full=BRG1-associated factor 190B; Short=BAF190B; AltName: Full=Protein brahma homolog; AltName: Full=SNF2-alpha; AltName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2) HSP 1 Score: 1391.33 bits (3600), Expect = 0.000e+0 Identity = 729/1257 (58.00%), Postives = 925/1257 (73.59%), Query Frame = 0
Query: 148 FLARNQPLPPQIAMAVSGK----RPEGQGPPGAPPYGPSRPGGPPGSASPGGPPNMQAPAPGGRGPTPNTTGPTGGTPGVAPTGKPNRVTPVAKPAGIDPITLLQERENRLAARVAHRIDELSNLPVSMADDTRTKAEIELRALRLLNFQRQLRAEVVACTRRDTTLETAINVKAYKRTKRQGLREARATEKLEKQQRLEAERRRRQKHQEYLNAVLTHGRDLQNFHRNNLGKIQKLNKAVLNWHANHEREQKKEQERIEKERLRRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYINQLTDMVKQHKVEQVQKQKELRKKAKLEEQA------------GAMLDESSQMSDVRVHVKELSTGKIIRGDNAPLASELESWLEKNPGFEQVPRDEDSD-------------------------DSDGEEKPETTSSAEAILAKAKEEATKE-----DEGDGVDYYTIAHTISEEITEQAPMLVGGKLKEYQVKGLEWLVSLYNNCLNGILADEMGLGKTIQTIALITYLMERKKNMGPYLIIVPLSTLSNWALEFEKWAPACNVVSYKGSPAARRTAQNAMRGSKFNVLVTTYEYVIKDKAMLSKIRWKYMIIDEGHRMKNHHCKLTQILNTFYTSNNRLLLTGTPLQNKLPELWALLNFLLPSIFKACNTFEQWFNAPFAITGEKVELNEEETILIIRRLHKVLRPFLLRRLKKDVESQLPDKVEYIVKCEMSGLQRTLYNHMQEKGVMKTD---KINKGKKGAKALMNTIMQLRKLCNHPFMYQPIEEAYAKHIGMPTDIVTGPDVYRSSGKFELIDRILPKLKATGHRVLMFCQMTQCMTIIEDYFNYRGFKFLRLDGMTKSEDRADMLKIFNEKASDYFIFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARFKLNMDEKVIQAGRFNNRSTGSERRELLQSILRADEEEEEENEVPDDEVINQMIARSEDEFEKFTQMDLDRRREEAALGPNRKDRLIQIKELPEFLLAEDDDDDE---EEEEEIVYGRGSRAKKETNYNDQLSDKEWLKVIGAEDEEFDDDDEDDEEIKKPGKRVKRKKREDEEVEDEFANQNRKKKKSSAK------RLQKKMATLMQIVVQYKDQDERVLSEPFMKLPSKKELPDYYEVIKRPVDIARIMNKIADGKYEDVDAMEKDFVLMCANTQKYNEDGSLIYEDSIVLQSVFTNARERL 1346
++ N+P P + +SG+ + P G P P P +A PG P++Q PAPG P + K +R++P+ KP G+DP+ +LQERE RL AR+AHRI EL +LP S+ D RTKA +EL+ALRLLNFQRQLR EVVAC RRDTTLETA+N KAYKR+KRQ LREAR TEKLEKQQ++E ER+RRQKHQEYLN++L H +D + +HR+ GKIQKL+KAV WHAN EREQKKE ERIEKER+RRLMAEDEEGYRKLIDQKKD+RLA+LL QTDEY+ LT++V +HK Q K+K+ R++ K + + G +DESSQMSD+ V V TGK++ G AP AS+L++WLE NPG+E PR + + D + EE E A+ I+ AK++ E YYT+AH ISE + +Q+ +L+ G LK YQ++GLEW+VSLYNN LNGILADEMGLGKTIQTIALITYLME K+ GPYLIIVPLSTLSNW EF+KWAP+ +SYKG+PA RR+ +R KFNVL+TTYEY+IKDK +L+KIRWKYMI+DEGHRMKNHHCKLTQ+LNT Y + R+LLTGTPLQNKLPELWALLNFLLP+IFK+C+TFEQWFNAPFA+TGE+V+LNEEETILIIRRLHKVLRPFLLRRLKK+VESQLP+KVEY++KC+MS LQ+ LY HMQ KG++ TD K KGK GAK LMNTIMQLRK+CNHP+M+Q IEE++A+H+G ++ G ++YR+SGKFEL+DRILPKL+AT HRVL+FCQMT MTI+EDYF +R F +LRLDG TKSEDRA +LK FNE S YFIFLLSTRAGGLGLNLQ ADTVVIFDSDWNPHQDLQAQDRAHRIGQ+NEVRVLRL TVNSVEE+ILAAA++KLN+D+KVIQAG F+ +S+ ERR LQ+IL +EE EEE+EVPDDE +NQMIAR E+EF+ F +MD+DRRRE+A P RK RL++ ELP +++ +D + + EEEEE ++GRGSR +++ +Y+D L++K+WL+ I E + +E +EE++ ++ +R +D ED + R+ + + K +L K+M ++ V+ YKD R LSE F++LPS+K+LP+YYE+I++PVD +I +I + KY + +EKD +L+C N Q +N +GS IYEDSIVLQSVF +AR+++
Sbjct: 259 LVSYNRPSGPGQELLLSGQSAPQKLSAPAPSGRPSPAPQAAVQPTATAVPG--PSVQQPAPGQPSPV------------LQLQQKQSRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELESLPGSLPPDLRTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHANTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVWEHKQAQAAKEKKKRRRRKKKAEENAEGGEPALGPDGEPIDESSQMSDLPVKVTHTETGKVLFGPEAPKASQLDAWLEMNPGYEVAPRSDSEESESDYEEEDEEEESSRQETEEKILLDPNSEEVSE--KDAKQIIETAKQDVDDEYSMQYSARGSQSYYTVAHAISERVEKQSALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDRRREDAR-NPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQWLRAI-----EDGNLEEMEEEVRLKKRKRRRNVDKDPVKEDVEKAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVINYKDSSGRQLSEVFIQLPSRKDLPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKI 1493 HSP 2 Score: 60.077 bits (144), Expect = 1.644e-7 Identity = 47/161 (29.19%), Postives = 66/161 (40.99%), Query Frame = 0
Query: 40 MRPSPSPSPMTGPPNSYPPTQGPPSDLQKLQNSINQMEERGMQNDPRY-----NQARQLHQNMMSRQGP--------------------------PPGAPGAPPGAGPPGGPAG--PPGQDKGQFQNPQMLQLRAQIMAYRFLARNQPLPPQIAMAVSGKR 167
M PSP P ++ P ++ P + +L ++ + ++G+ D R H M Q P PP P + PGA PG P P + F Q+ QLRAQI+AY+ LAR QPLP + +AV GKR
Sbjct: 44 MGPSPGPPSVSHPLSTMGSADFPQEGMHQLHKPMDGIHDKGIVEDVHCGSMKGTSMRPPHPGMGPPQSPMDQHSQGYMSPHPSPLGAPEHVSSPTPPQMPPSQPGALIPGDPQAMNQPNRGPSPFSPVQLHQLRAQILAYKMLARGQPLPETLQLAVQGKR 204
BLAST of homeotic gene vs. SwissProt
Match: gi|46397098|sp|O94421.2|SNF22_SCHPO (RecName: Full=SWI/SNF chromatin-remodeling complex subunit snf22; AltName: Full=ATP-dependent helicase snf22; AltName: Full=SWI/SNF complex subunit snf22) HSP 1 Score: 822.772 bits (2124), Expect = 0.000e+0 Identity = 473/1141 (41.45%), Postives = 669/1141 (58.63%), Query Frame = 0
Query: 232 VTPVAKPAGIDPITLLQERENRLAARVAHRIDELS--NLPVS----MADDTRTKAEIELRALRLLNFQRQLRAEVVACTRRDTTLETAINVKAYKRTKRQGLREARATEKLEKQQRLEAERRRRQKHQEYLNAVLTHGRDLQNFHRNNLGKIQKLNKAVLNWHANHEREQKKEQERIEKERLRRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYINQLTDMVKQHKVEQVQKQKELRKKAKLEEQAGAMLDESSQMSDVRVHVKELSTGKIIRGDNAPLASELESWLEKNPGFEQVPRDEDSDDSDGEEKPETTSSAEAILAKAKEEATKEDEGDGVDYYTIAHTISEEITEQAPMLVGGKLKEYQVKGLEWLVSLYNNCLNGILADEMGLGKTIQTIALITYLMERKKNMGPYLIIVPLSTLSNWALEFEKWAPACNVVSYKGSPAARRTAQNAMRGSKFNVLVTTYEYVIKDKAMLSKIRWKYMIIDEGHRMKNHHCKLTQILNTFYTSNNRLLLTGTPLQNKLPELWALLNFLLPSIFKACNTFEQWFNAPFAITG--EKVELNEEETILIIRRLHKVLRPFLLRRLKKDVESQLPDKVEYIVKCEMSGLQRTLYNHMQEKGVMKTDKINKGKKGAKALMNTIMQLRKLCNHPFMYQPIEEAYAKHIGMPTDIVTGPDVYRSSGKFELIDRILPKLKATGHRVLMFCQMTQCMTIIEDYFNYRGFKFLRLDGMTKSEDRADMLKIFNEKASDYFIFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARFKLNMDEKVIQAGRFNNRSTGSERRELLQSILRADEEEEEE---NEVPDDEVINQMIARSEDEFEKFTQMDLDRRREEAALGPNRKDRLIQIKELPEFLLAEDDD---DDEEEEEEIVYGRGSRAKKETNYNDQLSDKEWLKVIGAEDEEFDDDDEDDEEIKKPGKRVKRKKREDE--------EVEDEFANQNRKKKKS-SAKRLQKKMATLMQIVVQYKDQDERVLSEPFMKLPSKKELPDYYEVIKRPVDIARIMNKIADGKYEDVDAMEKDFVLMCANTQKYNEDGSLIYEDSIVLQSVFTNARERLDAD 1349
+ P P I + E +A +A+RID L N P S + ++K+ IELR LRLL QR LR + + +L ++ KRQ ++EA L ++Q+ E R+++K +LTH LR +M +RK I K DK Q + D++ H + +++K + + A+ QA DE++ +++ L K R + L + + +LE + R + S+ G + ++SAE EA +E +DY+ +AH I EE+ EQ + VGG LK+YQ+KGLEW++SLYNN LNGILADEMGLGKTIQTIA ITYL+E+K GP+LIIVPLSTL+NW +EFEKWAP+ ++YKG P R+T Q+ +R S FNVL+TT+EY+IKD+ +LS+I+W +MIIDEGHR+KN KLT L+T+Y S RL+LTGTPLQN LPELWALLNF+LP IF + +F++WFN PFA TG +K+ LNEEE +LII+RLHKVLRPFL RRLKKDVE +LPDKVE ++KC +SGLQ LY M++ G++ D KGK G K L NT+MQL+K+CNHPF+++ +E A G D+ ++R++GKFEL+DRILPKL TGH+ LMF QMTQ MTI+EDY + +K+LRLDG TKS+DR +L FN+ SD +IF+LSTRAGGLGLNLQTADTV+IFD+DWNPHQDLQAQDRAHRIGQ EVR+LRL+T S+EE IL+ A++KL++D KVIQAG+F+N+ST ER L+S+L D +++ + E+ DDE +N++I+R+++E F ++D +R + +RL+ + ELP+F E D E E+ R R + +Y + D E + D D P KR + +K+ + E A RK S K L++ + + + + +D R ++ F+ P++K PDYY +IKRP+ + +I I + +Y DV + DF+LM N YNE+ S++YED+ +++ E L+ +
Sbjct: 590 LIPSLLPPSISWDDVFLSSEIAIACSIANRIDFLEKENRPKSVNKKILQQDKSKSMIELRCLRLLEKQRSLRETINSVIPHSDSLAAGNLRLMFRNVKRQTMQEANLVLALAEKQKTEHAMRQKEK-------LLTH--------------------------------------------LRSIML-----HRKSIVTKVDK-------QNKAKTQRCKDIINFHAHLEKEEKKRIERSARQRLQALRADDEAA-------YLQLLDKAKDTRITH--LLKQTDQYLE---NLTRAVRIQQSNIHSGNTSGKGSNSAEL-------EAPISEEDKNLDYFKVAHRIHEEV-EQPKIFVGGTLKDYQLKGLEWMLSLYNNNLNGILADEMGLGKTIQTIAFITYLIEKKNQQGPFLIIVPLSTLTNWIMEFEKWAPSVKKIAYKGPPQLRKTLQSQIRSSNFNVLLTTFEYIIKDRPLLSRIKWVHMIIDEGHRIKNTQSKLTSTLSTYYHSQYRLILTGTPLQNNLPELWALLNFVLPKIFNSIKSFDEWFNTPFANTGGQDKIGLNEEEALLIIKRLHKVLRPFLFRRLKKDVEKELPDKVEKVIKCPLSGLQLKLYQQMKKHGMLFVDG-EKGKTGIKGLQNTVMQLKKICNHPFIFEDVERAIDPS-GTNVDL-----LWRAAGKFELLDRILPKLFLTGHKTLMFFQMTQIMTIMEDYLRSKNWKYLRLDGSTKSDDRCSLLAQFNDPKSDVYIFMLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQTKEVRILRLITEKSIEENILSRAQYKLDLDGKVIQAGKFDNKSTPEEREAFLRSLLEHDGDDDHDLTYGELQDDE-LNELISRTDEELVLFKKLDKERAATDIYGKGKPLERLLTVNELPDFYKVEVDSFAVQSSSELEDQYLERKRRRRNSISYTELTLD------------ELNTVD-DPSSTLMPRKRGRPRKKTNSGSSLSTPLSQESSLARSGRKNTPSYKQKALRRYCMEIFERLYNLQSEDGRFVNGLFLYPPNRKLYPDYYIIIKRPIALGKIKRNIKNDRYGDVGELIADFMLMFNNAYTYNEEHSIVYEDAKLMEKTLKEVIEDLEKN 1626
BLAST of homeotic gene vs. SwissProt
Match: gi|46397295|sp|Q9UTN6.1|SNF21_SCHPO (RecName: Full=Chromatin structure-remodeling complex subunit snf21; AltName: Full=ATP-dependent helicase snf21; AltName: Full=RSC complex subunit snf21) HSP 1 Score: 815.068 bits (2104), Expect = 0.000e+0 Identity = 414/803 (51.56%), Postives = 564/803 (70.24%), Query Frame = 0
Query: 563 VDYYTIAHTISEEITEQAPMLVGGKLKEYQVKGLEWLVSLYNNCLNGILADEMGLGKTIQTIALITYLMERKKNMGPYLIIVPLSTLSNWALEFEKWAPACNVVSYKGSPAARRTAQNAMRGSKFNVLVTTYEYVIKDKAMLSKIRWKYMIIDEGHRMKNHHCKLTQILNTFYTSNNRLLLTGTPLQNKLPELWALLNFLLPSIFKACNTFEQWFNAPFAITG--EKVELNEEETILIIRRLHKVLRPFLLRRLKKDVESQLPDKVEYIVKCEMSGLQRTLYNHMQEKGVMKTDKINKGKKGAKALMNTIMQLRKLCNHPFMYQPIEEAYAKHIGMPTDIVTGPDVYRSSGKFELIDRILPKLKATGHRVLMFCQMTQCMTIIEDYFNYRGFKFLRLDGMTKSEDRADMLKIFNEKASDYFIFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARFKLNMDEKVIQAGRFNNRSTGSERRELLQSIL---RADEEEEEENEVPDDEVINQMIARSEDEFEKFTQMDLDRRREEAALGPNR-KDRLIQIKELPEFLLAEDDDDDEEEEEEIVYGRGSRAKKETNYNDQLSDKEWLKVIGAEDEEFDDDDEDDEEIKKPGK-RVKRKKREDEEVEDEFANQNRKKKKSSA---------KRLQKKMATLMQIVVQYKDQDERVLSEPFMKLPSKKELPDYYEVIKRPVDIARIMNKIADGKYEDVDAMEKDFVLMCANTQKYNEDGSLIYEDSIVLQSVFTNARERLDAD 1349
+DYY +AH I E +TEQ +LVGGKLKEYQ++GL+W++SLYNN LNGILADEMGLGKTIQTI+LIT+L+E+K+ GP+L+IVPLSTL+NW +EFE+WAP+ + YKG P R+ +R S F VL+TTYEY+IKD+ +LS+I+W YMIIDEGHRMKN KLT L T+Y+S RL+LTGTPLQN LPELWALLNF+LP IF + +F++WFN PFA TG +K+EL EEE++L+IRRLHKVLRPFLLRRLKKDVE++LPDKVE +++C+MSGLQ+ LY M++ G++ + +GK G K L NT+MQL+K+CNHPF+++ +E + G D+ ++R SGKFEL+DRILPKL +GHR+LMF QMTQ M I+EDY +YR +++LRLDG TK++DR+ +L +FN+ ++ +FLLSTRAGGLGLNLQTADTV+IFDSDWNPHQDLQAQDRAHRIGQ EVR+ RL+T SVEE ILA A++KL++D KVIQAG+F+N+ST ER L+S+L +EE +E+ E+ DDE +N+++AR +DE F QM D R E+ G N+ K+RLIQ+ ELPEF E+ + + +E GRG+R + Y++ + D +W+ + E E +P + R KR +E N KKK+ A L++ + + V + +D + R L++ F++LPSKK PDYY +IK P+ + I I Y+ ++AM+ D + M N + YNE+GS +YED+ +Q+ E L+ D
Sbjct: 392 IDYYNVAHNIREVVTEQPSILVGGKLKEYQLRGLQWMISLYNNHLNGILADEMGLGKTIQTISLITHLIEKKRQNGPFLVIVPLSTLTNWTMEFERWAPSIVKIVYKGPPQVRKALHPQVRHSNFQVLLTTYEYIIKDRPLLSRIKWIYMIIDEGHRMKNTQSKLTNTLTTYYSSRYRLILTGTPLQNNLPELWALLNFVLPRIFNSIKSFDEWFNTPFANTGGQDKMELTEEESLLVIRRLHKVLRPFLLRRLKKDVEAELPDKVEKVIRCQMSGLQQKLYYQMKKHGMLYVEDAKRGKTGIKGLQNTVMQLKKICNHPFVFEDVERS-IDPTGFNYDM-----LWRVSGKFELLDRILPKLFRSGHRILMFFQMTQIMNIMEDYLHYRQWRYLRLDGSTKADDRSKLLGVFNDPTAEVNLFLLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQTKEVRIYRLITEKSVEENILARAQYKLDIDGKVIQAGKFDNKSTPEEREAFLRSLLENENGEEENDEKGELDDDE-LNEILARGDDELRLFKQMTEDLER-ESPYGKNKEKERLIQVSELPEFYQREEPEKTTDLLQEEPLGRGARRRTPVVYDEAVRDAQWMAEMDMESE------------ARPTRGRPKRNIASVDETPALTLNGKPKKKRGPAPDTLTSEHRSLLRRVCLEIYKAVNELEDDNGRPLNKLFLELPSKKLYPDYYMIIKSPIALDAIRKHINGTFYKTLEAMKSDLMTMFNNARTYNEEGSFVYEDANKMQTAMETKIEELEED 1174 HSP 2 Score: 123.635 bits (309), Expect = 5.240e-27 Identity = 100/340 (29.41%), Postives = 156/340 (45.88%), Query Frame = 0
Query: 132 QNPQMLQLRAQIMAYRFLARNQPLPPQIAMAVSGKRPEGQGPPGAPPYGPSRPGGPPGSASPGGPPNMQAPAPGGRGPTPNTTGPTGGTPGVAPTGKPNRVTPVAKPAGIDPITLLQERENRLAARVAHRIDELSNLPVSMADDTRTK--------------AEIELRALRLLNFQRQLRAEVVACTRRDTTLETAINVKAYKRTKRQGLREARATEKLEKQQRLEAERRRRQKHQEYLNAVLTHGRDLQNFHRNNLGKIQKLNKAVLNWHANHEREQKKEQERIEKERLRRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYINQLTDMVKQHKVEQVQ 457
+N + L L+ Q++AY+ L++N P P ++V + + + + P + G G+ + P+ K R + + D I R+ R+ +L + P M D K A +EL+ LRL+ Q LR +V+ C T+ A+ + +R K + R TE LE+QQR + ERR +QK +YL V HGR++ +N + QK N+AVL +H++ E+E+++ ER K+RL+ L DEE Y KLIDQ KD R+ LL QTD Y++ L V KV+Q Q
Sbjct: 68 KNTEKLILKQQVLAYKKLSQNLPAPDDCILSVLLRLSKDEQLLQSIVKQPLQNSKVDGKVRRDF-----------------------GSCQITPSAKQQRKYLQYQISEDDAI----------KNRMFRRMSDLESYPAVMRDVAELKDDNERLNLDTIKRNALVELKKLRLIKQQESLRHQVMHCQPHLRTIVNAVERMSCRRPKLVP-QATRLTEVLERQQRSDRERRLKQKQCDYLQTVCAHGREINVRTKNAQARAQKANRAVLAYHSHIEKEEQRRAERNAKQRLQALKENDEEAYLKLIDQAKDTRITHLLRQTDHYLDSLAAAV---KVQQSQ 370
BLAST of homeotic gene vs. SwissProt
Match: gi|134589|sp|P22082.1|SNF2_YEAST (RecName: Full=Transcription regulatory protein SNF2; AltName: Full=ATP-dependent helicase SNF2; AltName: Full=Regulatory protein GAM1; AltName: Full=Regulatory protein SWI2; AltName: Full=SWI/SNF complex component SNF2; AltName: Full=Transcription factor TYE3) HSP 1 Score: 771.541 bits (1991), Expect = 0.000e+0 Identity = 450/972 (46.30%), Postives = 621/972 (63.89%), Query Frame = 0
Query: 268 LPVSMADDTRTKAEIELRALRLLNFQRQLRAEVVACTRRDTTLETAINVKAYKRTKRQGLREARATEKLEKQQRLEAERRRRQKHQEYLNAVLTHGRDLQNFHRNNLGKIQKLN--KAVLN--WHANHE--REQKKEQERIEKERLRRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYINQLTDMVKQHKVEQVQKQKELRKKAKLEEQAGAMLDESSQMSDVRVHVKELSTGKIIRGDNAPLASELESWLEKNPGFEQVPRDEDSDDSDGEEKPETTSSAEAILAKAKEEATKEDEGDGVDYYTIAHTISEEITEQAPMLVGGKLKEYQVKGLEWLVSLYNNCLNGILADEMGLGKTIQTIALITYLMERKKNMGPYLIIVPLSTLSNWALEFEKWAPACNVVSYKGSPAARRTAQNAMRGSKFNVLVTTYEYVIKDKAMLSKIRWKYMIIDEGHRMKNHHCKLTQILNTFYTSNNRLLLTGTPLQNKLPELWALLNFLLPSIFKACNTFEQWFNAPFAITG--EKVELNEEETILIIRRLHKVLRPFLLRRLKKDVESQLPDKVEYIVKCEMSGLQRTLYNHM-QEKGVMKTDKINKGKKGAKALMNTIMQLRKLCNHPFMYQPIEEAYAKHIGMPTDIVTGPDVYRSSGKFELIDRILPKLKATGHRVLMFCQMTQCMTIIEDYFNYRGFKFLRLDGMTKSEDRADMLKIFNEKASDYFIFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARFKLNMDEKVIQAGRFNNRSTGSERRELLQSILRADEEEEEENE-------VPDDEVINQMIARSEDEFEKFTQMDLDRRREEAALGPNRKDRLIQIKELPEFL---LAEDDDDDEEEEEEIVYGRGSRAKKETNYNDQLSDKEWLKVIGAEDEEFDDDDEDDEEIKKPGKRVKRKKREDE 1220
LPV + DT T +I + L LN L V C L+ +N + + T+ L + A + L Q+ + + + HQ N++LT N H N L KI+ +N A+L + NHE + ++K+ E + RL+ + Y + D KK+KRL F + N D +Q + E+ K++ KA EE +LD Q D R+ ++R NA L S + + Q ++ DS +E E + EE +D+ VDYY +AH I E+I +Q +LVGG LK+YQ+KGL+W+VSL+NN LNGILADEMGLGKTIQTI+L+TYL E K GPYL+IVPLSTLSNW+ EF KWAP +S+KGSP R+ Q +R +F+V++TT+EY+IK++A+LSK++W +MIIDEGHRMKN KL+ LNT Y ++ RL+LTGTPLQN LPELWALLNF+LP IF + +F++WFN PFA TG +K+EL+EEET+L+IRRLHKVLRPFLLRRLKKDVE +LPDKVE +VKC+MS LQ+ +Y M + + + D+ NK G + N IMQL+K+CNHPF+++ +E+ PT T D++R +GKFEL+DRILPKLKATGHRVL+F QMTQ M I+ED+ Y K+LRLDG TKS++R+++L++FN S+Y F+LSTRAGGLGLNLQTADTV+IFD+DWNPHQDLQAQDRAHRIGQKNEVR+LRL+T NSVEE IL A KL++D KVIQAG+F+N+ST E+ LL+S+L A+EE ++ E D IN+++AR+++E T+MD DR ++E LG K RL++ ELP+ + + +E E + GRG+R +K YND +S+++WL+ E DD+++D++ +K +R K+ED+
Sbjct: 484 LPVGI--DTHTATDI-YQTLIALN----LDTTVNDC------LDKLLNDECTESTRENALYDYYALQLLPLQKAVRGHVLQFEWHQ---NSLLT------NTHPNFLSKIRNINVQDALLTNQLYKNHELLKLERKKTEAVA--RLKSMNKSAINQYNRRQD-KKNKRLKFGHRLIATHTNLERD--EQKRAEKKAKERLQALKANDEEAYIKLLD---QTKDTRI-------THLLRQTNAFLDSLTRAVKD------QQKYTKEMIDSHIKEASEEVDDLSMVPKMKDEEYDDDDDNSNVDYYNVAHRIKEDIKKQPSILVGGTLKDYQIKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTYLYEMKNIRGPYLVIVPLSTLSNWSSEFAKWAPTLRTISFKGSPNERKAKQAKIRAGEFDVVLTTFEYIIKERALLSKVKWVHMIIDEGHRMKNAQSKLSLTLNTHYHADYRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIELSEEETLLVIRRLHKVLRPFLLRRLKKDVEKELPDKVEKVVKCKMSALQQIMYQQMLKYRRLFIGDQNNKKMVGLRGFNNQIMQLKKICNHPFVFEEVEDQIN-----PTR-ETNDDIWRVAGKFELLDRILPKLKATGHRVLIFFQMTQIMDIMEDFLRYINIKYLRLDGHTKSDERSELLRLFNAPDSEYLCFILSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTNSVEEVILERAYKKLDIDGKVIQAGKFDNKSTSEEQEALLRSLLDAEEERRKKRESGVEEEEELKDSEINEILARNDEEMAVLTRMDEDRSKKEEELGV--KSRLLEKSELPDIYSRDIGAELKREESESAAVYNGRGARERKTATYNDNMSEEQWLRQF-----EVSDDEKNDKQARK-----QRTKKEDK 1394 HSP 2 Score: 80.8777 bits (198), Expect = 6.506e-14 Identity = 61/220 (27.73%), Postives = 104/220 (47.27%), Query Frame = 0
Query: 232 VTPVAKPAGIDPITLLQERENRLAARVAHRIDELSN--LPVSMADDTRTKAEIELRALRLLNFQRQLRAEVVACTRRDTTLETAINVKAYKRTKRQGLREARATEKLEKQQRLEAERRRRQKHQEYLNAVLTHGRDLQNFHRNNLGKIQKLNKAVLNWHANHEREQKKEQERIEKERLRRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYINQLTDMVK 449
+ P P GID T + +A + +++ + L + TR A + AL+LL Q+ +R V+ +L T + + + +++A T +L K L R++ + L ++ + N ++ K K ++ H N ER+++K E+ KERL+ L A DEE Y KL+DQ KD R+ LL QT+ +++ LT VK
Sbjct: 479 IEPGVLPVGIDTHTATDIYQTLIALNLDTTVNDCLDKLLNDECTESTRENALYDYYALQLLPLQKAVRGHVLQFEWHQNSLLTNTHPNFLSKIRNINVQDALLTNQLYKNHELLKLERKKTEAVARLKSMNKSAINQYNRRQDKKNKRLKFGHRLIATHTNLERDEQKRAEKKAKERLQALKANDEEAYIKLLDQTKDTRITHLLRQTNAFLDSLTRAVK 698 HSP 3 Score: 71.633 bits (174), Expect = 4.002e-11 Identity = 36/102 (35.29%), Postives = 57/102 (55.88%), Query Frame = 0
Query: 1239 KRLQKKMATLMQIVVQYKDQDERVLSEPFMKLPSKKELPDYYEVIKRPVDIARIMNKIADGKYEDVDAMEKDFVLMCANTQKYNEDGSLIYEDSIVLQSVFT 1340
+++ K+ L + Y+++ R LS+ F+ PSK PDYY +IK PV I I Y + +DF L+ +N + YN +GS++YEDS+ L+ V T
Sbjct: 1548 EKVAKQALDLYHFALNYENEAGRKLSDIFLSKPSKALYPDYYMIIKYPVAFDNINTHIETLAYNSLKETLQDFHLIFSNARIYNTEGSVVYEDSLELEKVVT 1649
BLAST of homeotic gene vs. nr
Match: gi|1068385357|ref|XP_018059755.1| (PREDICTED: ATP-dependent helicase brm isoform X1 [Atta colombica]) HSP 1 Score: 1597.41 bits (4135), Expect = 0.000e+0 Identity = 833/1329 (62.68%), Postives = 1022/1329 (76.90%), Query Frame = 0
Query: 65 DLQKLQNSINQMEERGMQNDPRYNQARQLHQNMMSRQGPPPGAPGAPPGAGPPGGPAGPPGQDKGQFQNPQMLQLRAQIMAYRFLARNQPLPPQIAMAVSGKRPEGQGPPGAPPYGPSRPGGPPG-SASPGGPPNMQAPAPGGRGPTPNTTGPTGGT-PGVAPT----------GKPNRVTPVAKPAGIDPITLLQERENRLAARVAHRIDELSNLPVSMADDTRTKAEIELRALRLLNFQRQLRAEVVACTRRDTTLETAINVKAYKRTKRQGLREARATEKLEKQQRLEAERRRRQKHQEYLNAVLTHGRDLQNFHRNNLGKIQKLNKAVLNWHANHEREQKKEQERIEKERLRRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYINQLTDMVKQHKVEQVQKQKELRKKAKLEE--QAGAMLDESSQMSDVRVHVKELSTGKIIRGDNAPLASELESWLEKNPGFEQVP-------------------RDEDSDDSDGEEKPETTSSAEAILAKAKEEATKEDEGDGVDYYTIAHTISEEITEQAPMLVGGKLKEYQVKGLEWLVSLYNNCLNGILADEMGLGKTIQTIALITYLMERKKNMGPYLIIVPLSTLSNWALEFEKWAPACNVVSYKGSPAARRTAQNAMRGSKFNVLVTTYEYVIKDKAMLSKIRWKYMIIDEGHRMKNHHCKLTQILNTFYTSNNRLLLTGTPLQNKLPELWALLNFLLPSIFKACNTFEQWFNAPFAITGEKVELNEEETILIIRRLHKVLRPFLLRRLKKDVESQLPDKVEYIVKCEMSGLQRTLYNHMQEKGVMKTD---KINKGKKGAKALMNTIMQLRKLCNHPFMYQPIEEAYAKHIGM-PTDIVTGPDVYRSSGKFELIDRILPKLKATGHRVLMFCQMTQCMTIIEDYFNYRGFKFLRLDGMTKSEDRADMLKIFNEKASDYFIFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARFKLNMDEKVIQAGRFNNRSTGSERRELLQSIL-RADEEEEEENEVPDDEVINQMIARSEDEFEKFTQMDLDRRREEAALGPNRKDRLIQIKELPEFLLAEDDDDDE---EEEEEIVYGRGSRAKKETNYNDQLSDKEWLKVIGAEDEEFDDDDEDDEEIKKPGKRVKRKKREDEEVEDEFANQNRKKKKSSAK----RLQKKMATLMQIVVQYKD-QDERVLSEPFMKLPSKKELPDYYEVIKRPVDIARIMNKIADGKYEDVDAMEKDFVLMCANTQKYNEDGSLIYEDSIVLQSVFTNARERLD 1347
+L LQ +I+ MEE+G+Q DPRY+Q L +RQG G DK F + Q+ QLRAQIMAYR LARNQ +P Q+A+A G GAPP PPG S P P G + P PN GPTG PG K NRVT V KPAG+DP+ +LQERENR+AAR++ R+++LSNLP +M +D R +A+IELR LR+LNFQRQLR+E++ACTR+DTTLETA+NVKAYKRTKRQGLREARATEKLEKQQ+LEAER+RRQKHQE+L++VL HG+D + FHRNN+ K+ +LNKAVLN+HAN EREQKKEQERIEKER+RRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYI+ LT+MVKQHK+EQ +KQ E +K+ K ++ Q G ++ D R+ V E +TG+ + GD APL S+L ++LE +PG+E + +D+ DS+ E+ +T A K +++ K +E YY+IAHT+ E +TEQA ++V GKLKEYQ+KGLEWLVSL+NN LNGILADEMGLGKTIQTIAL+TYLME+KK GP+LIIVPLSTLSNW LEFEKWAP+ VVSYKGSPA RRT Q+ MR +KFNVL+TTYEYVIKDK +L+K++WKYMIIDEGHRMKNHHCKLTQ+LNT Y + +RLLLTGTPLQNKLPELWALLNFLLPSIFK+C+TFEQWFNAPFA TGEKVELNEEETILIIRRLHKVLRPFLLRRLKK+VESQLPDKVEYI+KC+MSGLQ+ LY HMQ KGV+ TD K +GK GAKALMNTI+QLRKLCNHPFM+Q IEE Y +H+G + ++TGPD+YR+SGKFEL+DRILPKLKAT HRVL+FCQMTQ MTI+EDY ++RGF +LRLDG TK+EDR D+LK FN+ S+YF+FLLSTRAGGLGLNLQ ADTV+IFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAAR+KLNMDEKVIQAG F+ +STGSER++ LQSIL + D ++EEENEVPDDE +NQMIAR+E EFE F ++DL+RRREEA LGPNRK RL++ ELP++L+ +DD+ + EE+E+ GRGSR +KE +Y D L++KEWLK I + E+++++EDD++ KK KR K+ + +DE + KK++ + ++++ M L+ +VV Y D D R+LSEPFMKLPS++ELPDYYE+IK+P+ I +++ KI +GKY D+D +EKDF+ +C N Q YNE+ SLI+EDSIVLQSVFTNAR+RL+
Sbjct: 728 NLNALQKAIDSMEEKGLQEDPRYSQLLALR----ARQGSGMG--------------------DKQAFNSQQLQQLRAQIMAYRLLARNQAVPQQVALAAQG---------GAPP--------PPGMSQRPIDPSQGPVTTSGPQIPGPNVIGPTGAPRPGCQTPQQQQQQPQSGAKANRVTSVGKPAGLDPLLILQERENRVAARISLRMEQLSNLPTNMPEDLRIQAQIELRMLRVLNFQRQLRSEIIACTRKDTTLETAVNVKAYKRTKRQGLREARATEKLEKQQKLEAERKRRQKHQEFLSSVLQHGKDFKEFHRNNVAKLARLNKAVLNYHANAEREQKKEQERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYISNLTEMVKQHKIEQKRKQVEEQKRKKKKKKLQDGENAEDGGANDDTRIGVIETATGRTLTGDEAPLMSQLSAFLEAHPGWEPIESDSEEDEDDDEEENGENESKDKSMGDSEEEKVKKTIHKA-----KVEDDEYKTEE---QTYYSIAHTVHEVVTEQASIMVNGKLKEYQIKGLEWLVSLFNNNLNGILADEMGLGKTIQTIALVTYLMEKKKVNGPFLIIVPLSTLSNWVLEFEKWAPSVVVVSYKGSPAGRRTIQSQMRATKFNVLLTTYEYVIKDKGVLAKLQWKYMIIDEGHRMKNHHCKLTQVLNTHYLAPHRLLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYKHMQSKGVLLTDGSEKGKQGKGGAKALMNTIVQLRKLCNHPFMFQAIEEKYCEHVGTQGSGVITGPDLYRASGKFELLDRILPKLKATNHRVLLFCQMTQLMTIMEDYLSWRGFMYLRLDGTTKAEDRGDLLKKFNDPGSEYFLFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERQQFLQSILHQDDADDEEENEVPDDETVNQMIARTEGEFEIFQKLDLERRREEAKLGPNRKSRLLEEAELPDWLVKDDDEVERWTYEEDEDRFLGRGSRQRKEVDYTDSLTEKEWLKAIDDDGAEYEEEEEDDKKKKKTRKRKKKGEEDDEPMP--------KKRRGAGSLVDPKMKRAMKKLITLVVNYTDSSDGRLLSEPFMKLPSRRELPDYYEIIKKPLTINKLLQKIEEGKYADLDELEKDFMQLCKNAQIYNEEASLIHEDSIVLQSVFTNARQRLE 1999
BLAST of homeotic gene vs. nr
Match: gi|746848537|ref|XP_011054677.1| (PREDICTED: ATP-dependent helicase brm isoform X1 [Acromyrmex echinatior]) HSP 1 Score: 1597.41 bits (4135), Expect = 0.000e+0 Identity = 836/1319 (63.38%), Postives = 1025/1319 (77.71%), Query Frame = 0
Query: 65 DLQKLQNSINQMEERGMQNDPRYNQARQLHQNMMSRQGPPPGAPGAPPGAGPPGGPAGPPGQDKGQFQNPQMLQLRAQIMAYRFLARNQPLPPQIAMAVSGKRPEGQGPPGAPPYGPSRPGGPPG-SASPGGPPNMQAPAPGGRGPTPNTTGPTGGT-PGVAPT----------GKPNRVTPVAKPAGIDPITLLQERENRLAARVAHRIDELSNLPVSMADDTRTKAEIELRALRLLNFQRQLRAEVVACTRRDTTLETAINVKAYKRTKRQGLREARATEKLEKQQRLEAERRRRQKHQEYLNAVLTHGRDLQNFHRNNLGKIQKLNKAVLNWHANHEREQKKEQERIEKERLRRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYINQLTDMVKQHKVEQVQKQKELRKKAKLEE--QAGAMLDESSQMSDVRVHVKELSTGKIIRGDNAPLASELESWLEKNPGFEQVPRDEDSDDS-----DGEEKPETTS-SAEAILAKAKEEATKEDEGDGVD---YYTIAHTISEEITEQAPMLVGGKLKEYQVKGLEWLVSLYNNCLNGILADEMGLGKTIQTIALITYLMERKKNMGPYLIIVPLSTLSNWALEFEKWAPACNVVSYKGSPAARRTAQNAMRGSKFNVLVTTYEYVIKDKAMLSKIRWKYMIIDEGHRMKNHHCKLTQILNTFYTSNNRLLLTGTPLQNKLPELWALLNFLLPSIFKACNTFEQWFNAPFAITGEKVELNEEETILIIRRLHKVLRPFLLRRLKKDVESQLPDKVEYIVKCEMSGLQRTLYNHMQEKGVMKTD---KINKGKKGAKALMNTIMQLRKLCNHPFMYQPIEEAYAKHIGM-PTDIVTGPDVYRSSGKFELIDRILPKLKATGHRVLMFCQMTQCMTIIEDYFNYRGFKFLRLDGMTKSEDRADMLKIFNEKASDYFIFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARFKLNMDEKVIQAGRFNNRSTGSERRELLQSIL-RADEEEEEENEVPDDEVINQMIARSEDEFEKFTQMDLDRRREEAALGPNRKDRLIQIKELPEFLLAEDDDDDE---EEEEEIVYGRGSRAKKETNYNDQLSDKEWLKVIGAEDEEFDDDDEDDEEIKKPGKRVKRKKREDEEVEDEFANQNRKKKKSSAK----RLQKKMATLMQIVVQYKD-QDERVLSEPFMKLPSKKELPDYYEVIKRPVDIARIMNKIADGKYEDVDAMEKDFVLMCANTQKYNEDGSLIYEDSIVLQSVFTNARERLD 1347
+L LQ +I+ MEE+G+Q DPRY+Q L +RQG G G DK F + Q+ QLRAQIMAYR LARNQ +P Q+A+A G GAPP PPG S P P G + P PN GPTG PG K NRVT V KPAG+DP+ +LQERENR+AAR++ R+++LSNLP +M +D R +A+IELR LR+LNFQRQLR+E++ACTR+DTTLETA+NVKAYKRTKRQGLREARATEKLEKQQ+LEAER+RRQKHQE+L++VL HG+D + FHRNN+ K+ +LNKAVLN+HAN EREQKKEQERIEKER+RRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYI+ LT+MVKQHK+EQ +KQ E +K+ K ++ Q G ++ D R+ V E +TG+ + GD APL S+L ++LE +PG+E + D + D+ +GE K ++ S E + K +A ED+ + YY+IAHT+ E +TEQA ++V GKLKEYQ+KGLEWLVSL+NN LNGILADEMGLGKTIQTIAL+TYLME+KK GP+LIIVPLSTLSNW LEFEKWAP+ VVSYKGSPA RRT Q+ MR +KFNVL+TTYEYVIKDK +L+K++WKYMIIDEGHRMKNHHCKLTQ+LNT Y + +RLLLTGTPLQNKLPELWALLNFLLPSIFK+C+TFEQWFNAPFA TGEKVELNEEETILIIRRLHKVLRPFLLRRLKK+VESQLPDKVEYI+KC+MSGLQ+ LY HMQ KGV+ TD K +GK GAKALMNTI+QLRKLCNHPFM+Q IEE Y +H+G + ++TGPD+YR+SGKFEL+DRILPKLKAT HRVL+FCQMTQ MTI+EDY ++RGF +LRLDG TK+EDR D+LK FN+ S+YF+FLLSTRAGGLGLNLQ ADTV+IFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAAR+KLNMDEKVIQAG F+ +STGSER++ LQSIL + D ++EEENEVPDDE +NQMIAR+E EFE F ++DL+RRREEA LGPNRK RL++ ELP++L+ +DD+ + EE+E+ GRGSR +KE +Y D L++KEWLK I + E+++++EDD++ KK KR K+ + +DE + KK++ + ++++ M L+ +VV Y D D R+LSEPFMKLPS++ELPDYYE+IK+P+ I +++ KI +GKY D+D +EKDF+ +C N Q YNE+ SLI+EDSIVLQSVFTNAR+RL+
Sbjct: 725 NLNALQKAIDSMEEKGLQEDPRYSQLLALR----ARQGS---------GMG-----------DKQAFNSQQLQQLRAQIMAYRLLARNQAVPQQVALAAQG---------GAPP--------PPGMSQRPIDPSQGPVTTSGPQIPGPNVIGPTGTPRPGCQTPQQQQQQPQSGAKANRVTSVGKPAGLDPLLILQERENRVAARISLRMEQLSNLPTNMPEDLRIQAQIELRMLRVLNFQRQLRSEIIACTRKDTTLETAVNVKAYKRTKRQGLREARATEKLEKQQKLEAERKRRQKHQEFLSSVLQHGKDFKEFHRNNVAKLARLNKAVLNYHANAEREQKKEQERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYISNLTEMVKQHKIEQKRKQVEEQKRKKKKKKLQDGENAEDGGVNDDTRIGVIETATGRTLTGDEAPLMSQLSAFLEAHPGWEPIESDSEEDEDDDEEENGESKDKSMGDSEEEKVKKTIHKAKVEDDEYKTEEQTYYSIAHTVHEVVTEQASIMVNGKLKEYQIKGLEWLVSLFNNNLNGILADEMGLGKTIQTIALVTYLMEKKKVNGPFLIIVPLSTLSNWVLEFEKWAPSVVVVSYKGSPAGRRTIQSQMRATKFNVLLTTYEYVIKDKGVLAKLQWKYMIIDEGHRMKNHHCKLTQVLNTHYLAPHRLLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYKHMQSKGVLLTDGSEKGKQGKGGAKALMNTIVQLRKLCNHPFMFQAIEEKYCEHVGTQGSGVITGPDLYRASGKFELLDRILPKLKATNHRVLLFCQMTQLMTIMEDYLSWRGFMYLRLDGTTKAEDRGDLLKKFNDPGSEYFLFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERQQFLQSILHQDDADDEEENEVPDDETVNQMIARTEGEFEIFQKLDLERRREEAKLGPNRKSRLLEEAELPDWLVKDDDEVERWTYEEDEDRFLGRGSRQRKEVDYTDSLTEKEWLKAIDDDGAEYEEEEEDDKKKKKTRKRKKKGEEDDEPMP--------KKRRGAGSLVDPKMKRAMKKLITLVVNYTDSSDGRLLSEPFMKLPSRRELPDYYEIIKKPLTINKLLQKIEEGKYADLDELEKDFMQLCKNAQIYNEEASLIHEDSIVLQSVFTNARQRLE 1994
BLAST of homeotic gene vs. nr
Match: gi|1227978062|ref|XP_021920576.1| (ATP-dependent helicase brm-like isoform X1 [Zootermopsis nevadensis] >gi|1227978064|ref|XP_021920578.1| ATP-dependent helicase brm-like isoform X1 [Zootermopsis nevadensis] >gi|1227978066|ref|XP_021920579.1| ATP-dependent helicase brm-like isoform X1 [Zootermopsis nevadensis]) HSP 1 Score: 1597.02 bits (4134), Expect = 0.000e+0 Identity = 860/1422 (60.48%), Postives = 1029/1422 (72.36%), Query Frame = 0
Query: 39 GMRPSPSPSPMTGPPNSYPPTQGPPSDLQKLQNSINQMEERGMQNDPRYNQARQLHQNMMSRQGPPPGAPGAPPGA---GPPGGPAGPPGQDKGQFQNPQMLQLRAQIMAYRFLARNQPLPPQIAMAVSGKRPE--------GQGPPGA-------PPYGPSRPGGPPGSASPGGPPNMQAPAPG----GRGPTPNT---TGPTGGTPGVAPTG---------------------------KPNRVTPVAKPAGIDPITLLQERENRLAARVAHRIDELSNLPVSMADDTRTKAEIELRALRLLNFQRQLRAEVVACTRRDTTLETAINVKAYKRTKRQGLREARATEKLEKQQRLEAERRRRQKHQEYLNAVLTHGRDLQNFHRNNLGKIQKLNKAVLNWHANHEREQKKEQERIEKERLRRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYINQLTDMVKQHKVEQVQKQKELRKKAKLE-------EQAGAMLDESSQMSDVRVHVKELSTGKIIRGDNAPLASELESWLEKNPGFEQVPR--------------------------DEDSDDSDGEEKPETTSSAEAILAKAK-EEATKEDEGDGVDYYTIAHTISEEITEQAPMLVGGKLKEYQVKGLEWLVSLYNNCLNGILADEMGLGKTIQTIALITYLMERKKNMGPYLIIVPLSTLSNWALEFEKWAPACNVVSYKGSPAARRTAQNAMRGSKFNVLVTTYEYVIKDKAMLSKIRWKYMIIDEGHRMKNHHCKLTQILNTFYTSNNRLLLTGTPLQNKLPELWALLNFLLPSIFKACNTFEQWFNAPFAITGEKVELNEEETILIIRRLHKVLRPFLLRRLKKDVESQLPDKVEYIVKCEMSGLQRTLYNHMQEKGVMKTD---KINKGKKGAKALMNTIMQLRKLCNHPFMYQPIEEAYAKHIGMPTDIVTGPDVYRSSGKFELIDRILPKLKATGHRVLMFCQMTQCMTIIEDYFNYRGFKFLRLDGMTKSEDRADMLKIFNEKASDYFIFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARFKLNMDEKVIQAGRFNNRSTGSERRELLQSIL-RADEEEEEENEVPDDEVINQMIARSEDEFEKFTQMDLDRRREEAALGPNRKDRLIQIKELPEFLLAEDDDDDE---EEEEEIVYGRGSRAKKETNYNDQLSDKEWLKV------------------IGAEDEEFDDDDEDDEEIKKPGKRVKRKKREDEEVEDEFANQNRKKKKSSAKRLQKKMATLMQIVVQYKDQDERVLSEPFMKLPSKKELPDYYEVIKRPVDIARIMNKIADGKYEDVDAMEKDFVLMCANTQKYNEDGSLIYEDSIVLQSVFTNARERLDAD 1349
GM PSP S P +S T Q LQ +I MEE+GMQ+DPRY+Q L +S P P GP G G P K F + Q+ QLR QIMAYR LARNQPL Q+A+AV GKR + Q PGA P P GG P S SP P AP+PG G PT +T TG GTP V PT K NRVTP+AKPAG+DP+ +LQERENRLAAR+AHRI+EL+NLP MA+D + KA+IELRALRLLNFQRQLR EVVACTR+DT LET+ ++K YKRTKRQGLREARATEKLEKQQ+LEAER+RRQKHQEYLNAVL HG+DL+ +HRNN+ KI +LN+AVLN HAN EREQKKEQERIEKER+RRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYI LT+MVKQHKVEQ +KQ+E +++ K + E + DESSQMSDVRV V E ++GKI+ GD APLAS+ + WL+ +PG+E PR + D + K A+ ++ KAK E+ ++ + YY+IAHTI+E++TEQA ++V GKLKEYQ++GLEWLVSLYNN LNGILADEMGLGKTIQTI LITYLME+K+ GPYLIIVPLSTLSNW LEFEKWAP+ VV+YKGSPA RRT Q+ MR +KFNVL+TTYEY+IKDKA+L+K+RWK+MIIDEGHRMKNHHCKLTQ+LNT Y + +RLLLTGTPLQNKLPELWALLNFLLPSIFK+ +TFEQWFNAPFA TGEKVELNEEETILIIRRLHKVLRPFLLRRLKK+VESQLPDKVEYI+KC+MSGLQR LY+HMQ KGV+ TD K +GK GAKALMNTIMQLRKLCNHPFM+Q IE+AY H+G+ +V GPD+YR+SGKFEL+DRILPKLKAT HRVL+FCQMTQ MTI+EDY +RGF +LRLDG TK+EDR ++L+ FN SDYF+FLLSTRAGGLGLNLQ+ADTV+IFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAAR+KLNMDEKVIQAG F+ +STGSER++ L++IL + + ++EEENEVPDDE +NQMIAR E EFE F +MDL+RRRE++ LG +R+ RL++ +ELP +L+ ED++ D+ EEEEE YGRGSR +KE +Y D L++KEWLK + + D+DD E V+ +K +++K+M L+ IV++Y D+D R LS PFMKLPSK+ELP YY +IKRP+DI +I ++ + KY +E+DF+ MC N QKYNE+ SLI+EDSIVL++VF NAR RL+ D
Sbjct: 93 GMLPSPQMSGQMVPQSSSQDT------YQALQRAIGAMEEKGMQSDPRYSQLLALRARQVSYSSPGQADPSRVMQTCLQGPGGFLDGTP---KYIFSSLQLQQLRVQIMAYRLLARNQPLTSQMALAVQGKRIDPAPLQRMPQQLDPGAVGGVMQQPMRAPGPVGGQPPSQSP--LPGQPAPSPGQQTVGTSPTTSTSPGTGAGTGTPVVQPTSATQCPRSLPSSGPAASAQSAAQPPPQQKQNRVTPIAKPAGLDPLIILQERENRLAARIAHRIEELNNLPTVMAEDLKIKAQIELRALRLLNFQRQLRTEVVACTRKDTMLETSCHIKTYKRTKRQGLREARATEKLEKQQKLEAERKRRQKHQEYLNAVLQHGKDLKEYHRNNIAKILRLNRAVLNHHANAEREQKKEQERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYIGNLTEMVKQHKVEQRRKQREQKERKKKKKKRSEDGEMIDGLNDESSQMSDVRVTVMETASGKILCGDEAPLASQFQMWLDMHPGWEAAPREDDDEDEDDDVSDDDSDDYEDEDRVVKKSRDGNSLNSKLSEEEKAKVVIQKAKVEDDEYKNFTEEQTYYSIAHTITEKVTEQASVMVNGKLKEYQIRGLEWLVSLYNNNLNGILADEMGLGKTIQTIGLITYLMEKKRVNGPYLIIVPLSTLSNWVLEFEKWAPSVIVVAYKGSPAMRRTIQSQMRATKFNVLLTTYEYIIKDKAVLAKLRWKFMIIDEGHRMKNHHCKLTQVLNTHYLAPHRLLLTGTPLQNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQRVLYSHMQSKGVLLTDGSEKGKQGKGGAKALMNTIMQLRKLCNHPFMFQHIEKAYCDHVGIHGSVVIGPDLYRASGKFELLDRILPKLKATSHRVLLFCQMTQLMTIMEDYLGWRGFIYLRLDGTTKAEDRGELLRKFNSPGSDYFVFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERQQFLKTILHQDEADDEEENEVPDDETVNQMIARCETEFELFQKMDLERRREDSKLGSDRRPRLMEEQELPTWLVKEDEEGDKWTAEEEEERYYGRGSRQRKEVDYTDSLTEKEWLKAIDEGIEEEDEEERKPARKKFRKRKRKDEDDPGSGSSATVVGPPVVMVVEQSHVKKRRGRPPLEKGSMLNSKIKKQMRKLVNIVIKYTDRDGRTLSGPFMKLPSKQELPGYYNIIKRPIDIKKIQQRLEENKYSSFFDLERDFIQMCRNAQKYNEEASLIHEDSIVLETVFANARVRLEQD 1503
BLAST of homeotic gene vs. nr
Match: gi|478261415|gb|ENN80792.1| (hypothetical protein YQE_02801, partial [Dendroctonus ponderosae] >gi|546680988|gb|ERL91162.1| hypothetical protein D910_08502 [Dendroctonus ponderosae]) HSP 1 Score: 1597.02 bits (4134), Expect = 0.000e+0 Identity = 866/1407 (61.55%), Postives = 1042/1407 (74.06%), Query Frame = 0
Query: 7 PPAGAPGPMPVRGGPPGSGPHSPMPPPESPSPGMRPSPSPSPMTGPPNSYPPTQGPPSDLQKLQNSINQMEERGMQNDPRYNQARQLHQNMMSRQGPPPGAPGAPPGAGPPGGPAGPPGQDKGQFQNPQMLQLRAQIMAYRFLARNQPLPPQIAMAVSGKRPEGQGPPGA--PPYGPSRPGGP------------PGSASPGGPPNMQAPAPGG-RGPTPNTTGPTGGTPGVAPTG-----KPNRVTPVAKPAGIDPITLLQERENRLAARVAHRIDELSNLPVSMADDTRTKAEIELRALRLLNFQRQLRAEVVACTRRDTTLETAINVK-AYKRTKRQGLREARATEKLEKQQRLEAERRRRQKHQEYLNAVLTHGRDLQNFHRNNLGKIQKLNKAVLNWHANHEREQKKEQERIEKERLRRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYINQLTDMVKQHKVEQVQKQKELRKKAKLEEQA----GAML--DESSQMSDVRVHVKELSTGKIIRGDNAPLASELESWLEKNPGFEQVPRDEDSDDSDGEEKP--ETTSSAEAILAKAKEEATKEDE-----GDGVDYYTIAHTISEEITEQAPMLVGGKLKEYQVKGLEWLVSLYNNCLNGILADEMGLGKTIQTIALITYLMERKKNMGPYLIIVPLSTLSNWALEFEKWAPACNVVSYKGSPAARRTAQNAMRGSKFNVLVTTYEYVIKDKAMLSKIRWKYMIIDEGHRMKNHHCKLTQILNTFYTSNNRLLLTGTPLQNKLPELWALLNFLLPSIFKACNTFEQWFNAPFAITGEKVELNEEETILIIRRLHKVLRPFLLRRLKKDVESQLPDKVEYIVKCEMSGLQRTLYNHMQEKGVMKTD---KINKGKKGAKALMNTIMQLRKLCNHPFMYQPIEEAYAKHIGMPTDIVTG----PDVYRSSGKFELIDRILPKLKATGHRVLMFCQMTQCMTIIEDYFNYRGFKFLRLDGMTKSEDRADMLKIFNEKASDYFIFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARFKLNMDEKVIQAGRFNNRSTGSERRELLQSIL-RADEEEEEENEVPDDEVINQMIARSEDEFEKFTQMDLDRRREEAALGPNRKDRLIQIKELPEFLLAEDDDDD--EEEEEEIVYGRGSRAKKETNYNDQLSDKEWLKVIGAEDEEFDDDDEDDEEIKKPGKRVKRKKREDEEVEDEFAN-QNRKKKKSSA---KRLQKKMATLMQIVVQYKDQDERVLSEPFMKLPSKKELPDYYEVIKRPVDIARIMNKIADGKYEDVDAMEKDFVLMCANTQKYNEDGSLIYEDSIVLQSVFTNARERLDADPDAGDDKDDKDDMSLG 1365
PP G P PP P MPP PS G PSP+ P +G S Q +L+ LQ++I+ M+E+GMQ DPRY+Q L A G PA QM QLR QIMAYR+LARNQP+P QI MA+ GKRP+G + PP G P P P A P PP P PGG + P P+ P G K R T V KP G+DPI LLQERENR+AAR+A R+++L+NLP M ++ R +A+IELRALR LNFQRQLR E++ACTRRDTTLETA+N+K AYKRTKRQGLREARATEKLEKQQ+LEAER+RRQKHQE+LN++L HG+D ++FHRN+LG++ KLNKA+LN+HAN EREQKKEQERIEKER+RRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYI LT+MVKQHK+EQ +KQ E ++ K + + G ++ DE SQ SD + V E+S+GK + GD APL S+L++WL++NPG+E D++ DD E K E S + A K+ ++DE G+ YY IAHT+ E +TEQA +++ G+LKEYQ+KGLEWLVSLYNN LNGILADEMGLGKTIQTI LITYLME+KK GP+LIIVPLSTLSNW LEFEKWAP+ VVSYKGSPA RR Q+ MR +KFNVL+TTYEYVIKDK +L+K++WKYMIIDEGHRMKNHHCKLTQ+LNT Y + +RLLLTGTPLQNKLPELWALLNFLLPSIFK+C+TFEQWFNAPFA TGEKVELNEEETILIIRRLHKVLRPFLLRRLKK+VESQLPDKVEYI+KC+MSGLQR LY HMQ KGV+ TD + NKGK GAKALMNTI+QLRKLCNHPFM+Q IEE + HIG+ +++G PD+YR+SGKFEL+DRILPKLK T HRVL+FCQMTQ MTI+EDY YRGF +LRLDG TK+EDR D+LK FN K S+YFIFLLSTRAGGLGLNLQ+ADTVVIFDSDWNPHQDLQAQDRAHRIGQ NEVRVLRLMTVNSVEERILAAAR+KLNMDEKVIQAG F+ +STGSER++ LQ+IL + ++EEEENEVPDDE +NQM+ARS DEFE F +MDL+RRRE+A LG RK RLI ELP++L+ EDD+ D ++ +++ GRGSR +KE +Y D L++KEW+K I D+ E+DEE +P KR + K+R+ E D A +RKK K +L+++M LM IV +Y D D R+LSEPFMKLP +K+ PDYYEVIK+P+DI RI+ +I D KY ++ +E+DF+L+C N Q YNE+ SLI+EDSIVLQSVFTNA+ R++ D G+DK + D G
Sbjct: 42 PPQGQGQLHP----PPHLSPQGHMPPG-PPSQG-HPSPTHQPSSG---SVQGLQQGQDNLRALQSAIDSMDEKGMQEDPRYSQLLALR-------------------ARANGTPA---------LSQIQMTQLRNQIMAYRYLARNQPVPQQILMAIQGKRPDGSPLQASTPPPGGQDCPRDPLEAPELSPSITMPPQAQPMRPPMQPHPHPGGYQQPPPSQLYKQQPQQQPRPVGGIQHLKQARTTTVPKPVGLDPIMLLQERENRVAARIAARMEQLANLPSDMTEELRLQAQIELRALRCLNFQRQLRTEIIACTRRDTTLETAVNMKQAYKRTKRQGLREARATEKLEKQQKLEAERKRRQKHQEFLNSILQHGKDFKDFHRNSLGRVGKLNKAILNYHANAEREQKKEQERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYIASLTEMVKQHKIEQRKKQHEEERRKKRKRKRLAAEGVLIGDDEGSQDSDKPITVVEVSSGKKLGGDEAPLLSQLQAWLQQNPGWEIADTDDEDDDDYPEHKAGQEPKSEEDKAKALIKKAKVEDDEYHKRIGEEQSYYGIAHTVHEMVTEQASIMINGQLKEYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIGLITYLMEKKKVNGPFLIIVPLSTLSNWVLEFEKWAPSVIVVSYKGSPAGRRQIQSQMRSTKFNVLLTTYEYVIKDKGVLAKLQWKYMIIDEGHRMKNHHCKLTQVLNTHYMAPHRLLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQRVLYRHMQSKGVLLTDGSERGNKGKGGAKALMNTIVQLRKLCNHPFMFQHIEEKWCDHIGIAGGVISGVMCSPDIYRASGKFELLDRILPKLKTTNHRVLLFCQMTQLMTIMEDYLTYRGFGYLRLDGTTKAEDRGDLLKKFNAKNSEYFIFLLSTRAGGLGLNLQSADTVVIFDSDWNPHQDLQAQDRAHRIGQLNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERQQFLQTILHQDGDDEEEENEVPDDETVNQMVARSVDEFELFQKMDLERRREDAKLGAARKPRLIVESELPDWLVKEDDEVDPWNYDDNDVIMGRGSRQRKEVDYTDSLTEKEWMKAIDESDD------EEDEEDDEPKKRKRGKRRKKAEDSDSDAGPSSRKKLKGKLPDENKLKRQMKKLMTIVTKYTDSDGRLLSEPFMKLPPRKDYPDYYEVIKKPMDIMRIITRIEDAKYTEMADLERDFMLLCQNAQIYNEEASLIHEDSIVLQSVFTNAKARIETD---GEDKQQEADEEAG 1402
BLAST of homeotic gene vs. nr
Match: gi|1069676195|ref|XP_018300426.1| (PREDICTED: ATP-dependent helicase brm isoform X1 [Trachymyrmex zeteki]) HSP 1 Score: 1596.64 bits (4133), Expect = 0.000e+0 Identity = 833/1331 (62.58%), Postives = 1024/1331 (76.93%), Query Frame = 0
Query: 65 DLQKLQNSINQMEERGMQNDPRYNQARQLHQNMMSRQGPPPGAPGAPPGAGPPGGPAGPPGQDKGQFQNPQMLQLRAQIMAYRFLARNQPLPPQIAMAVSGKRPEGQGPPGAPPYGPSRPGGPPG-SASPGGPPNMQAPAPGGRGPTPNTTGPTGGT-PGVAPT----------GKPNRVTPVAKPAGIDPITLLQERENRLAARVAHRIDELSNLPVSMADDTRTKAEIELRALRLLNFQRQLRAEVVACTRRDTTLETAINVKAYKRTKRQGLREARATEKLEKQQRLEAERRRRQKHQEYLNAVLTHGRDLQNFHRNNLGKIQKLNKAVLNWHANHEREQKKEQERIEKERLRRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYINQLTDMVKQHKVEQ----VQKQKELRKKAKLEEQAGAMLDESSQMSDVRVHVKELSTGKIIRGDNAPLASELESWLEKNPGFEQVP-------------------RDEDSDDSDGEEKPETTSSAEAILAKAKEEATKEDEGDGVDYYTIAHTISEEITEQAPMLVGGKLKEYQVKGLEWLVSLYNNCLNGILADEMGLGKTIQTIALITYLMERKKNMGPYLIIVPLSTLSNWALEFEKWAPACNVVSYKGSPAARRTAQNAMRGSKFNVLVTTYEYVIKDKAMLSKIRWKYMIIDEGHRMKNHHCKLTQILNTFYTSNNRLLLTGTPLQNKLPELWALLNFLLPSIFKACNTFEQWFNAPFAITGEKVELNEEETILIIRRLHKVLRPFLLRRLKKDVESQLPDKVEYIVKCEMSGLQRTLYNHMQEKGVMKTD---KINKGKKGAKALMNTIMQLRKLCNHPFMYQPIEEAYAKHIGM-PTDIVTGPDVYRSSGKFELIDRILPKLKATGHRVLMFCQMTQCMTIIEDYFNYRGFKFLRLDGMTKSEDRADMLKIFNEKASDYFIFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARFKLNMDEKVIQAGRFNNRSTGSERRELLQSIL-RADEEEEEENEVPDDEVINQMIARSEDEFEKFTQMDLDRRREEAALGPNRKDRLIQIKELPEFLLAEDDDDDE---EEEEEIVYGRGSRAKKETNYNDQLSDKEWLKVIGAEDEEFDDDDEDDEEIKKPGKRVKRKKREDEEVEDEFANQNRKKKKSSAK----RLQKKMATLMQIVVQYKD-QDERVLSEPFMKLPSKKELPDYYEVIKRPVDIARIMNKIADGKYEDVDAMEKDFVLMCANTQKYNEDGSLIYEDSIVLQSVFTNARERLD 1347
+L LQ +I+ MEE+G+Q DPRY+Q L +RQG G G DK F + Q+ QLRAQIMAYR LARNQ +P Q+A+A G GAPP PPG S P P G + P PN GPTG PG K NRVT VAKP G+DP+ +LQERENR+AAR++ R+++L+NLP +M +D R +A+IELR LR+LNFQRQLR+E++ACTR+DTTLETA+NVKAYKRTKRQGLREARATEKLEKQQ+LEAER+RRQKHQE+L++VL HG+D + FHRNN+ K+ +LNKAVLN+HAN EREQKKEQERIEKER+RRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYI+ LT+MVKQHK+EQ V++QK +KK KL++ A ++ D R+ V E++TG+ + GD APL S+L ++LE +PG+E + +D+ DS+ E+ +T A K +++ K +E YY+IAHT+ E +TEQA ++V G LKEYQ+KGLEWLVSL+NN LNGILADEMGLGKTIQTIAL+TYLME+KK GP+LIIVPLSTLSNW LEFEKWAP+ VVSYKGSPA RRT Q+ MR +KFNVL+TTYEYVIKDK +L+K++WKYMIIDEGHRMKNHHCKLTQ+LNT Y + +RLLLTGTPLQNKLPELWALLNFLLPSIFK+C+TFEQWFNAPFA TGEKVELNEEETILIIRRLHKVLRPFLLRRLKK+VESQLPDKVEYI+KC+MSGLQ+ LY HMQ KGV+ TD K +GK GAKALMNTI+QLRKLCNHPFM+Q IEE Y +H+G + ++TGPD+YR+SGKFEL+DRILPKLKAT HRVL+FCQMTQ MTI+EDY ++RGF +LRLDG TK+EDR D+LK FN+ S+YF+FLLSTRAGGLGLNLQ ADTV+IFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAAR+KLNMDEKVIQAG F+ +STGSER++ LQSIL + D ++EEENEVPDDE +NQMIAR+E EFE F ++DL+RRREEA LGPNRK RL++ ELP++L+ +DD+ + EE+E+ GRGSR +KE +Y D L++KEWLK I + E+++++EDD++ KK KR K+ + +DE + KK++ + ++++ M L+ +VV Y D D R+LSEPFMKLPS++ELPDYYE+IK+P+ I +++ KI +GKY D+D +EKDF+ +C N Q YNE+ SLI+EDSIVLQSVFTNAR+RL+
Sbjct: 735 NLNALQKAIDSMEEKGLQEDPRYSQLLALR----ARQGS---------GMG-----------DKQAFNSQQLQQLRAQIMAYRLLARNQAVPQQVALAAQG---------GAPP--------PPGMSQRPIDPSQGPVTTSGPQIPGPNVIGPTGAPRPGCQTPQQQQQQPQSGAKANRVTSVAKPVGLDPLLILQERENRVAARISLRMEQLTNLPTNMPEDLRIQAQIELRMLRVLNFQRQLRSEIIACTRKDTTLETAVNVKAYKRTKRQGLREARATEKLEKQQKLEAERKRRQKHQEFLSSVLQHGKDFKEFHRNNVAKLARLNKAVLNYHANAEREQKKEQERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYISNLTEMVKQHKIEQKRKQVEEQKRKKKKKKLQDSENA--EDGGANDDTRIGVIEIATGRTLIGDEAPLMSQLSAFLEAHPGWEPIESDSEEDEEDDEEENGESESKDKSMGDSEEEKVKKTIHKA-----KVEDDEYKTEE---QTYYSIAHTVHEVVTEQASIMVNGMLKEYQIKGLEWLVSLFNNNLNGILADEMGLGKTIQTIALVTYLMEKKKVNGPFLIIVPLSTLSNWVLEFEKWAPSVVVVSYKGSPAGRRTIQSQMRATKFNVLLTTYEYVIKDKGVLAKLQWKYMIIDEGHRMKNHHCKLTQVLNTHYLAPHRLLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYKHMQSKGVLLTDGSEKGKQGKGGAKALMNTIVQLRKLCNHPFMFQAIEEKYCEHVGTQGSGVITGPDLYRASGKFELLDRILPKLKATNHRVLLFCQMTQLMTIMEDYLSWRGFMYLRLDGTTKAEDRGDLLKKFNDPGSEYFLFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERQQFLQSILHQDDADDEEENEVPDDETVNQMIARTEGEFEIFQKLDLERRREEAKLGPNRKSRLLEEAELPDWLVKDDDEVERWTYEEDEDRFLGRGSRQRKEVDYTDSLTEKEWLKAIDDDGAEYEEEEEDDKKKKKTRKRKKKSEEDDEPMP--------KKRRGAGSLVDPKMKRAMKKLITLVVNYTDSSDGRLLSEPFMKLPSRRELPDYYEIIKKPLTINKLLQKIEEGKYADLDELEKDFMQLCKNAQIYNEEASLIHEDSIVLQSVFTNARQRLE 2006 The following BLAST results are available for this feature:
BLAST of homeotic gene vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 25
Pagesback to top
BLAST of homeotic gene vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
Pagesback to top
BLAST of homeotic gene vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold495_size155559:39973..44957+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold495_size155559-snap-gene-0.32 ID=maker-scaffold495_size155559-snap-gene-0.32|Name=homeotic gene|organism=Tigriopus kingsejongensis|type=gene|length=4985bp|location=Sequence derived from alignment at scaffold495_size155559:39973..44957+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'homeotic gene' has the following synonyms
Add to Basket
|