homeotic gene, maker-scaffold495_size155559-snap-gene-0.32 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of homeotic gene vs. L. salmonis genes
Match: EMLSAG00000000894 (supercontig:LSalAtl2s:LSalAtl2s1155:69336:76256:-1 gene:EMLSAG00000000894 transcript:EMLSAT00000000894 description:"maker-LSalAtl2s1155-augustus-gene-0.8") HSP 1 Score: 87.4261 bits (215), Expect = 2.211e-17 Identity = 52/132 (39.39%), Postives = 79/132 (59.85%), Query Frame = 0 Query: 1224 DEFANQNRKKKKSSAKRLQKKMATLMQIVVQYKDQDERVLSEPFMKLPSKKELPDYYEVIKRPVDIARIMNKIADGKYEDVDAMEKDFVLMCANTQKYNEDGSLIYEDSIVLQSVF-TNARER-LDADPDAG 1353 DE N + +S +K+M +L V+ +K +DE L FM+ PSKK+ PDYYE+I P+D++ I KI G Y+ + + +D LM N ++YNE+GS IY+D+ +L+ V T ARE ++A P G Sbjct: 315 DESGNSLEGRPRSQRANTRKRMRSLYNAVLNFKTEDELSLVGMFMEKPSKKDYPDYYEIITNPIDMSMIDAKIKTGVYKSEEDVIQDMKLMFINCRRYNEEGSDIYKDANLLEKVLVTKAREMGINAGPGRG 446 HSP 2 Score: 87.0409 bits (214), Expect = 2.596e-17 Identity = 43/98 (43.88%), Postives = 60/98 (61.22%), Query Frame = 0 Query: 1241 LQKKMATLMQIVVQYKDQDERVLSEPFMKLPSKKELPDYYEVIKRPVDIARIMNKIADGKYEDVDAMEKDFVLMCANTQKYNEDGSLIYEDSIVLQSV 1338 L +K+ L + + YKD R LS F+ LP+ +E DYYE IK+P+D +I K+ YE V+ +DF+LM N KYNE S IY+D+I LQS+ Sbjct: 455 LSQKLKILFETLRDYKDHKGRQLSLIFLXLPNLREFADYYETIKKPIDFEKISGKMKQNAYESVEEALRDFILMFDNACKYNEPDSQIYKDAITLQSL 552 HSP 3 Score: 66.2402 bits (160), Expect = 5.596e-11 Identity = 39/126 (30.95%), Postives = 65/126 (51.59%), Query Frame = 0 Query: 1230 NRKKKKSSAKRLQKKMATLMQIVVQYKD--QDERVLSEPFMKLPSKKELPDYYEVIKRPVDIARIMNKIADGKYEDVDAMEKDFVLMCANTQKYNEDGSLIYEDSIVLQSVFTNARERLDADPDAG 1353 R++ + A L + + L+ +V+ D R++ PF LPS+K P+Y++VI P+D+ I KI Y + +E D + MC N +NE GS IY D+ + + + R L+A+ A Sbjct: 72 TREEPHNEAGXLIEMLEDLLAVVMXAIDPFDPNRLVHIPFRLLPSQKRYPEYFKVINDPIDLKMIATKIQTTSYTTLSELEDDLIKMCRNAMTFNEPGSQIYRDAKQVLKLTKSKRYELEANKIAA 197
BLAST of homeotic gene vs. L. salmonis genes
Match: EMLSAG00000010402 (supercontig:LSalAtl2s:LSalAtl2s68:516095:533261:1 gene:EMLSAG00000010402 transcript:EMLSAT00000010402 description:"maker-LSalAtl2s68-augustus-gene-5.2") HSP 1 Score: 85.8853 bits (211), Expect = 7.267e-17 Identity = 43/97 (44.33%), Postives = 63/97 (64.95%), Query Frame = 0 Query: 1243 KKMATLMQIVVQYKDQDERVLSEPFMKLPSKKELPDYYEVIKRPVDIARIMNKIADGKYEDVDAMEKDFVLMCANTQKYNEDGSLIYEDSIVLQSVF 1339 K M L ++ +KD + L FM+LPSKK+ PDYYEVI+ P+D+ I NKI +G Y++ + +D LM AN +KYNE+ S IY+D++ L+ V Sbjct: 366 KNMRILYNTILIHKDDEGVQLVSAFMELPSKKDYPDYYEVIEHPMDMNTINNKIKNGAYKNEEEYLQDMKLMFANCKKYNEERSEIYKDAVTLERVL 462 HSP 2 Score: 83.9593 bits (206), Expect = 2.415e-16 Identity = 44/107 (41.12%), Postives = 65/107 (60.75%), Query Frame = 0 Query: 1232 KKKKSSAKRLQKKMATLMQIVVQYKDQDERVLSEPFMKLPSKKELPDYYEVIKRPVDIARIMNKIADGKYEDVDAMEKDFVLMCANTQKYNEDGSLIYEDSIVLQSV 1338 KKK S+ KM L + YKD R LS F++LP++++ DYYEVIK+P+D +I KI Y++++ DF+LM N K+NE S IY+D++ LQS+ Sbjct: 482 KKKFLSSDSKNIKMKALFDALRDYKDVKGRQLSLIFLRLPNQRDFADYYEVIKKPIDFEKISTKIKTYVYDNLEETLADFILMFDNACKFNEPDSQIYKDALTLQSL 588 HSP 3 Score: 56.9954 bits (136), Expect = 4.590e-8 Identity = 31/105 (29.52%), Postives = 60/105 (57.14%), Query Frame = 0 Query: 1244 KMATLMQIVVQYKDQDERVLSEPFMKLPSKKELPDYYEVIKRPVDIARIMNKIADGKYEDVDAMEKDFVLMCANTQKYNEDGSLIYEDSIVLQSVFTNARERLDA 1348 +++TL + +YK +D L EPF++ P ++ P +YE + P+D+ RI K+ +YE + ++D LM ++ Y + S +++ L+ +F A ER++A Sbjct: 35 QISTLYDFIRKYKREDGTELCEPFIRAPKRRNDPGFYEGVSTPMDLLRIQQKMKMEEYESLWVFKEDVDLMLSHWLXYYPENSEESKNARELKELFYKAYERVEA 139
BLAST of homeotic gene vs. L. salmonis genes
Match: EMLSAG00000004415 (supercontig:LSalAtl2s:LSalAtl2s231:1197910:1199938:1 gene:EMLSAG00000004415 transcript:EMLSAT00000004415 description:"snap_masked-LSalAtl2s231-processed-gene-12.23") HSP 1 Score: 77.0258 bits (188), Expect = 2.014e-14 Identity = 62/235 (26.38%), Postives = 104/235 (44.26%), Query Frame = 0 Query: 910 SGKFELIDRILPKLKATGHRVLMFCQMTQCMTIIEDYFNYRGFKFL-------------------------RLDGMTKSEDRADMLKIFNEKAS-DYFIFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARFKLNMDEKVIQAGRFNNRSTGSERRELLQSILRADEEEEEENEVPDDEVINQMIARSEDEFEKFTQMD 1118 S K L+ IL G + L+F Q + +IE + + FL R+DG T R FN+ ++ + +FL+ST+AGGLG+NL A+ V+IFD+ WNP DLQ+ R +R GQ V+ +E+I K ++ +V+ + + +E EL + +EE +VP D V +++++ ++ K+ D Sbjct: 122 SPKMTLLMEILKNADILGDKTLVFSQSLLSLDMIETFLSKMNEYFLESDKEKIPECLKPFIRPWIQERNYFRMDGSTPPHVRKKWCNYFNKTSNKEMKLFLISTKAGGLGINLVAANRVIIFDASWNPAHDLQSIFRVYRFGQTKPVQ---------WKEKIYDRQVTKQSLSARVVDEQQIERHFSMNELTELYTFKDQDLDEERPVPKVPIDNVFAEILSKYPEKIWKYHDHD 347
BLAST of homeotic gene vs. L. salmonis genes
Match: EMLSAG00000004414 (supercontig:LSalAtl2s:LSalAtl2s231:1196161:1197658:1 gene:EMLSAG00000004414 transcript:EMLSAT00000004414 description:"snap_masked-LSalAtl2s231-processed-gene-12.26") HSP 1 Score: 75.8702 bits (185), Expect = 3.622e-14 Identity = 58/178 (32.58%), Postives = 83/178 (46.63%), Query Frame = 0 Query: 609 GILADEMGLGKTIQTIALI-TYLMERKKNMGPYLIIVPLSTLSNWALEFEKWAP---ACNVVSYKGSPAARRTAQNAMRGSKFNVLVTTYEYVIKDKAMLSKI----------RWKYMII-------------DEGHRMKNHHCKLTQILNTFYTSNNRLLLTGTPLQNKLPELWALL 759 ILA MGLGKT+QTIALI T L +++ L+I P++T+ NW EF+KW +V G N R + N + +I M + R K +I+ DEGH +KN + L + +N T R++LTGTPLQN L E +A++ Sbjct: 310 AILAHCMGLGKTLQTIALIHTVLTNFPEHITKVLVICPVNTVKNWKDEFDKWCKDSLELDVYELSGDKG------NDDRTDRLNYWLKEGGXLIIGYDMFRNLTTSASRKLNKRQKGIILRSLVDPGPDLVVCDEGHVLKNRNSALNKSINKIGTK-RRIILTGTPLQNNLSEYFAMV 480
BLAST of homeotic gene vs. L. salmonis genes
Match: EMLSAG00000000927 (supercontig:LSalAtl2s:LSalAtl2s1161:15715:16165:-1 gene:EMLSAG00000000927 transcript:EMLSAT00000000927 description:"maker-LSalAtl2s1161-snap-gene-0.17") HSP 1 Score: 67.0106 bits (162), Expect = 1.311e-13 Identity = 32/57 (56.14%), Postives = 43/57 (75.44%), Query Frame = 0 Query: 323 KRQGLREARATEKLEKQQRLEAERRRRQKHQEYLNAVLTHGRDLQNFHRNNLGKIQK 379 K+QG EA +EKLEKQ R+EAER+ RQ+HQE+L + +H RD Q+FH+NN K+ K Sbjct: 14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLK 70
BLAST of homeotic gene vs. SwissProt
Match: gi|19857556|sp|P25439.2|BRM_DROME (RecName: Full=ATP-dependent helicase brm; AltName: Full=Homeotic gene regulator; AltName: Full=Protein brahma) HSP 1 Score: 1497.26 bits (3875), Expect = 0.000e+0 Identity = 833/1493 (55.79%), Postives = 1007/1493 (67.45%), Query Frame = 0 Query: 25 GPHSPMPPPESPSPGMRPSPSPSPMTG-PPNSYPPTQ------------------GPPSDLQKLQNSINQMEERGMQNDPRYNQARQLHQNMMSRQGPPPGAPGAPPGAGPPGGPAGPPGQDKGQFQN-PQMLQLRAQIMAYRFLARNQPLPPQIAMAV---------------------------------------------SGKRPEGQGPPGAPPYGPSRPGGPPGSASPGGPPNMQAPAPGG--------------------------------------RGPTPNTTGPTGGTP---------------------------------GVAPTG----KPNRVTPVAKPAGIDPITLLQERENRLAARVAHRIDELSNLPVSMADDTRTKAEIELRALRLLNFQRQLRAEVVACTRRDTTLETAINVKAYKRTKRQGLREARATEKLEKQQRLEAERRRRQKHQEYLNAVLTHGRDLQNFHRNNLGKIQKLNKAVLNWHANHEREQKKEQERIEKERLRRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYINQLTDMVKQHKVEQVQKQKELRKKAKLEEQAGAM------LDESSQMSDVRVHVKELSTGKIIRGDNAPLASELESWLEKNPGFEQVPRDEDSDDSDGEEKP---ETTSSAEAILAKAKEEATKEDEGDGV---------------DYYTIAHTISEEITEQAPMLVGGKLKEYQVKGLEWLVSLYNNCLNGILADEMGLGKTIQTIALITYLMERKKNMGPYLIIVPLSTLSNWALEFEKWAPACNVVSYKGSPAARRTAQNAMRGSKFNVLVTTYEYVIKDKAMLSKIRWKYMIIDEGHRMKNHHCKLTQILNTFYTSNNRLLLTGTPLQNKLPELWALLNFLLPSIFKACNTFEQWFNAPFAITGEKVELNEEETILIIRRLHKVLRPFLLRRLKKDVESQLPDKVEYIVKCEMSGLQRTLYNHMQEKGVMKTD---KINKGKKGAKALMNTIMQLRKLCNHPFMYQPIEEAYAKHIGMPTDIVTGPDVYRSSGKFELIDRILPKLKATGHRVLMFCQMTQCMTIIEDYFNYRGFKFLRLDGMTKSEDRADMLKIFNEKASDYFIFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARFKLNMDEKVIQAGRFNNRSTGSERRELLQSIL-RADEEEEEENEVPDDEVINQMIARSEDEFEKFTQMDLDRRREEAALGPNRKDRLIQIKELPEFLLAEDDDDDE---EEEEEIVYGRGSRAKKETNYNDQLSDKEWLKVIGAEDEEFDDDDEDDEEIKKPGKRVKRKKREDEEVEDEFANQNRKKKKSSAKRLQKKMATLMQIVVQYKDQDERVLSEPFMKLPSKKELPDYYEVIKRPVDIARIMNKIADGKYEDVDAMEKDFVLMCANTQKYNEDGSLIYEDSIVLQSVFTNARERL 1346 GPH M P + P+ SP G PPN+ PTQ +L LQ +I+ MEE+G+Q DPRY+Q + K Q N Q+ LR QI AYR LARN+P+ Q+ A+ +G P+ PP + PYGP PG A P PP+MQ P G P + GP+GG P V P G KPNR+T VAKP G+DPITLLQERENR+AAR++ R+ EL LP +M++D R +A IELRALR+LNFQRQLR E V CTRRDTTLETA+N+K YKRTKRQGLREARATEKLEKQQ+LEAER+RRQKH E+L AVL HG+DL+ FHRNN ++ ++NKAV+N HAN EREQKKEQERIEKER+RRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYI+ LT MVKQHK +Q++K++E K+ ++ M +DE S ++D+RVHV E TGK + GD+AP+ L WL +PG++ + +EDS S+ + KP E ++ E KA+ ED D + YY+IAHTI E++ EQA ++V G LKEYQ+KGLEWLVSLYNN LNGILADEMGLGKTIQTI+L+TYLM+RKK MGPYLIIVPLSTL NW LEFEKWAPA VVSYKGSP RR QN MR +KFNVL+TTYEYVIKDKA+L+KI+WKYMIIDEGHRMKNHHCKLTQ+LNT Y + RLLLTGTPLQNKLPELWALLNFLLPSIFK+C+TFEQWFNAPFA TGEKVELNEEETILIIRRLHKVLRPFLLRRLKK+VE QLPDKVEYI+KC+MS LQR LY HMQ KGV+ TD K GK GAKALMNTI+QLRKLCNHPFM+Q IEE Y H G +V+GPD+YR SGKFEL+DRILPKLKAT HRVL+FCQMTQCMTIIEDY +R F +LRLDG TK+EDR ++L+ FN K SD F+FLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQ+NEVRVLRLMTVNSVEERILAAAR+KLNMDEKVIQAG F+ +STGSER++ LQ+IL + D EEEEENEVPDDE+IN MIARSE+E E F +MD +R++E+ + P R +RLI ELP++L +DD+ + + +E+ + GRGSR +KE +Y D L++KEWLK I E +++EE ++ +++K EE +D+ R+++++ KR +K+M +M V+++ +QD R LSEPFMKLPS++ LPDYYE+IKRPVDI +I+ +I D KY D++ +EKDF+ +C N Q YNE+ SLIY DSI LQ VF AR+R+ Sbjct: 85 GPHMGMQMPPTG-----PNMSPYQTHGMPPNA--PTQPCIVSPGGPPGGPPPPERSSQENLHALQRAIDSMEEKGLQEDPRYSQLLAMR------------------------------ATSKHQHLNGNQVNLLRTQITAYRLLARNKPISMQMQQALQAAQQQPPPGPPIGPPGAPGGPPPGSQHAGQPPVPPQQQQQPPPSAGTPPQCSTPPASNPYGPPVPGQKMQVAPP--PPHMQQGQPLPPQPPQVGGPPPIQQQQPPQQQQQQSQPPPPEPHQHQLPNGGKPLSMGPSGGQPLIPSSPMQPQVRGTLPGMPPGSQVPQPGGGPQRQVPPAGMPMPKPNRITTVAKPVGLDPITLLQERENRIAARISLRMQELQRLPATMSEDLRLQAAIELRALRVLNFQRQLRMEFVQCTRRDTTLETALNIKLYKRTKRQGLREARATEKLEKQQKLEAERKRRQKHLEFLAAVLQHGKDLREFHRNNKAQLARMNKAVMNHHANAEREQKKEQERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYISNLTQMVKQHKDDQMKKKEEEGKRLIQFKKELLMSGEYIGIDEGSIVADMRVHVVEQCTGKKLTGDDAPMLKHLHRWLNMHPGWDWIDDEEDSCGSNDDHKPKVEEQPTATEDATDKAQATGNDEDAKDLITKAKVEDDEYRTEEQTYYSIAHTIHEKVVEQASIMVNGTLKEYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTISLVTYLMDRKKVMGPYLIIVPLSTLPNWVLEFEKWAPAVGVVSYKGSPQGRRLLQNQMRATKFNVLLTTYEYVIKDKAVLAKIQWKYMIIDEGHRMKNHHCKLTQVLNTHYIAPYRLLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVEHQLPDKVEYIIKCDMSALQRVLYKHMQSKGVLLTDGSEKGKHGKGGAKALMNTIVQLRKLCNHPFMFQHIEEKYCDHTG-GHGVVSGPDLYRVSGKFELLDRILPKLKATNHRVLLFCQMTQCMTIIEDYLGWRQFGYLRLDGTTKAEDRGELLRKFNAKGSDVFVFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQRNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERQQFLQTILHQDDNEEEEENEVPDDEMINMMIARSEEEIEIFKRMDAERKKEDEEIHPGR-ERLIDESELPDWLTKDDDEVERFHYQYDEDTILGRGSRQRKEVDYTDSLTEKEWLKAIDDGAEF-----DEEEEEDDSKRKRRKRKNRKEESDDDSLILKRRRRQNLDKRSKKQMHKIMSAVIKH-NQDGRTLSEPFMKLPSRQRLPDYYEIIKRPVDIKKILQRIEDCKYADLNELEKDFMQLCQNAQIYNEEASLIYLDSIALQKVFVGARQRI 1530
BLAST of homeotic gene vs. SwissProt
Match: gi|116242792|sp|P51532.2|SMCA4_HUMAN (RecName: Full=Transcription activator BRG1; AltName: Full=ATP-dependent helicase SMARCA4; AltName: Full=BRG1-associated factor 190A; Short=BAF190A; AltName: Full=Mitotic growth and transcription activator; AltName: Full=Protein BRG-1; AltName: Full=Protein brahma homolog 1; AltName: Full=SNF2-beta; AltName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 4) HSP 1 Score: 1403.65 bits (3632), Expect = 0.000e+0 Identity = 739/1268 (58.28%), Postives = 916/1268 (72.24%), Query Frame = 0 Query: 196 PPNMQAPAPGGRGPTPNTTGPTGGTPGVAPTGKPNRVTPVAKPAGIDPITLLQERENRLAARVAHRIDELSNLPVSMADDTRTKAEIELRALRLLNFQRQLRAEVVACTRRDTTLETAINVKAYKRTKRQGLREARATEKLEKQQRLEAERRRRQKHQEYLNAVLTHGRDLQNFHRNNLGKIQKLNKAVLNWHANHEREQKKEQERIEKERLRRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYINQLTDMVKQHKVEQVQKQKELRKKAKLEEQA----------GAMLDESSQMSDVRVHVKELSTGKIIRGDNAPLASELESWLEKNPGFEQVPR-------------------------------------DEDSDDSDGEEKPETTSSAEAILAKAKEEATKEDEGDGVD---------YYTIAHTISEEITEQAPMLVGGKLKEYQVKGLEWLVSLYNNCLNGILADEMGLGKTIQTIALITYLMERKKNMGPYLIIVPLSTLSNWALEFEKWAPACNVVSYKGSPAARRTAQNAMRGSKFNVLVTTYEYVIKDKAMLSKIRWKYMIIDEGHRMKNHHCKLTQILNTFYTSNNRLLLTGTPLQNKLPELWALLNFLLPSIFKACNTFEQWFNAPFAITGEKVELNEEETILIIRRLHKVLRPFLLRRLKKDVESQLPDKVEYIVKCEMSGLQRTLYNHMQEKGVMKTD---KINKGKKGAKALMNTIMQLRKLCNHPFMYQPIEEAYAKHIGMPTDIVTGPDVYRSSGKFELIDRILPKLKATGHRVLMFCQMTQCMTIIEDYFNYRGFKFLRLDGMTKSEDRADMLKIFNEKASDYFIFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARFKLNMDEKVIQAGRFNNRSTGSERRELLQSILRADEEEE---------------------------------EENEVPDDEVINQMIARSEDEFEKFTQMDLDRRREEAALGPNRKDRLIQIKELPEFLLAEDDDDDE---EEEEEIVYGRGSRAKKETNYNDQLSDKEWLKVIGAEDEEFDDDDEDDEEIKKPGKRVKRKKREDEEV-------------EDEFANQNRKKKKSSAKRLQ-------KKMATLMQIVVQYKDQDE-RVLSEPFMKLPSKKELPDYYEVIKRPVDIARIMNKIADGKYEDVDAMEKDFVLMCANTQKYNEDGSLIYEDSIVLQSVFTNARERLD 1347 PP Q+P P P V K +R+TP+ KP G+DP+ +LQERE RL AR+AHRI EL NLP S+A D RTKA IEL+ALRLLNFQRQLR EVV C RRDT LETA+N KAYKR+KRQ LREAR TEKLEKQQ++E ER+RRQKHQEYLN++L H +D + +HR+ GKIQKL KAV +HAN EREQKKE ERIEKER+RRLMAEDEEGYRKLIDQKKDKRLA+LL QTDEY+ LT++V+QHK QV K+K+ +KK K E A G LDE+SQMSD+ V V + +GKI+ G +AP A +LE+WLE NPG+E PR D DSDD + A I+ AK++ D+ GV YY +AH ++E + +Q+ ++V G LK+YQ+KGLEWLVSLYNN LNGILADEMGLGKTIQTIALITYLME K+ GP+LIIVPLSTLSNWA EF+KWAP+ VSYKGSPAARR +R KFNVL+TTYEY+IKDK +L+KIRWKYMI+DEGHRMKNHHCKLTQ+LNT Y + RLLLTGTPLQNKLPELWALLNFLLP+IFK+C+TFEQWFNAPFA+TGEKV+LNEEETILIIRRLHKVLRPFLLRRLKK+VE+QLP+KVEY++KC+MS LQR LY HMQ KGV+ TD K KGK G K LMNTIMQLRK+CNHP+M+Q IEE++++H+G IV G D+YR+SGKFEL+DRILPKL+AT H+VL+FCQMT MTI+EDYF YRGFK+LRLDG TK+EDR +LK FNE S+YFIFLLSTRAGGLGLNLQ+ADTV+IFDSDWNPHQDLQAQDRAHRIGQ+NEVRVLRL TVNSVEE+ILAAA++KLN+D+KVIQAG F+ +S+ ERR LQ+IL +E++E EE+EVPDDE +NQMIAR E+EF+ F +MDLDRRREEA P RK RL++ ELP +++ +D + + EEEEE ++GRGSR +KE +Y+D L++K+WLK I E E +EE+++ K+ RK++ D + +D+ + + +K+ + A++L KKM ++ V++YKD R LSE F++LPS+KELP+YYE+I++PVD +I +I + KY ++ +EKD +L+C N Q +N +GSLIYEDSIVLQSVFT+ R++++ Sbjct: 327 PPQTQSPG-----------QPAQPAPMVPLHQKQSRITPIQKPRGLDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIGPDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEESGSEEEEEEEEEEQPQAAQPPTLPVEEKKKIPDPDSDDV-------SEVDARHIIENAKQDV---DDEYGVSQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDESRHCSTGSGSASFAHTAPPPAGVNPDLEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMRMDLDRRREEAR-NPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYSDSLTEKQWLKAIEEGTLE-----EIEEEVRQ--KKSSRKRKRDSDAGSSTPTTSTRSRDKDDESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIE 1565 HSP 2 Score: 87.0409 bits (214), Expect = 1.039e-15 Identity = 73/189 (38.62%), Postives = 88/189 (46.56%), Query Frame = 0 Query: 40 MRPSPSPSPMTGPPNSYPPTQGP---PSD-LQKLQNSINQMEERGMQNDPRYNQARQL------HQNMMSRQGPPPG-----APGAP-------------PGAGPPGGP---AGPPG--------QDKGQ-------FQNPQMLQLRAQIMAYRFLARNQPLPPQIAMAVSGKRP----EGQGPPGAPP 178 M PSP P P G P PTQGP P D + ++ + M E+GM +DPRYNQ + + H M GPPP + G P P +GP GP +GP G Q GQ F Q+ QLRAQIMAY+ LAR QPLP + MAV GKRP + Q P PP Sbjct: 43 MGPSPGP-PSAGHPI---PTQGPGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGM----GPPPSPMDQHSQGYPSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQLRAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPP 223
BLAST of homeotic gene vs. SwissProt
Match: gi|212276472|sp|P51531.2|SMCA2_HUMAN (RecName: Full=Probable global transcription activator SNF2L2; AltName: Full=ATP-dependent helicase SMARCA2; AltName: Full=BRG1-associated factor 190B; Short=BAF190B; AltName: Full=Protein brahma homolog; Short=hBRM; AltName: Full=SNF2-alpha; AltName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2) HSP 1 Score: 1403.27 bits (3631), Expect = 0.000e+0 Identity = 781/1489 (52.45%), Postives = 986/1489 (66.22%), Query Frame = 0 Query: 40 MRPSPSPSPMTGPPNSYPPTQGPPSDLQKLQNSINQMEERGMQND-------------------PRYNQARQLHQNMMSRQGPPPGAP---------GAP---------PGAGPPGGPAG--PPGQDKGQFQNPQMLQLRAQIMAYRFLARNQPLPPQIAMAVSGK---------------------------------------------------RPEGQGPPGAPPYGPSRPGGPPGSASPGGPPNMQAPAPGGRG--------------------PTPNTTGPTGGTPGVAPTGKPNRVTPVAKPAGIDPITLLQERENRLAARVAHRIDELSNLPVSMADDTRTKAEIELRALRLLNFQRQLRAEVVACTRRDTTLETAINVKAYKRTKRQGLREARATEKLEKQQRLEAERRRRQKHQEYLNAVLTHGRDLQNFHRNNLGKIQKLNKAVLNWHANHEREQKKEQERIEKERLRRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYINQLTDMVKQHKVEQ--------VQKQKELRKKAKLEEQA----GAMLDESSQMSDVRVHVKELSTGKIIRGDNAPLASELESWLEKNPGFEQVPRDEDSD-------------------------DSDGEEKPETTSSAEAILAKAKEEATKE-----DEGDGVDYYTIAHTISEEITEQAPMLVGGKLKEYQVKGLEWLVSLYNNCLNGILADEMGLGKTIQTIALITYLMERKKNMGPYLIIVPLSTLSNWALEFEKWAPACNVVSYKGSPAARRTAQNAMRGSKFNVLVTTYEYVIKDKAMLSKIRWKYMIIDEGHRMKNHHCKLTQILNTFYTSNNRLLLTGTPLQNKLPELWALLNFLLPSIFKACNTFEQWFNAPFAITGEKVELNEEETILIIRRLHKVLRPFLLRRLKKDVESQLPDKVEYIVKCEMSGLQRTLYNHMQEKGVMKTD---KINKGKKGAKALMNTIMQLRKLCNHPFMYQPIEEAYAKHIGMPTDIVTGPDVYRSSGKFELIDRILPKLKATGHRVLMFCQMTQCMTIIEDYFNYRGFKFLRLDGMTKSEDRADMLKIFNEKASDYFIFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARFKLNMDEKVIQAGRFNNRSTGSERRELLQSILRADEEEEEENEVPDDEVINQMIARSEDEFEKFTQMDLDRRREEAALGPNRKDRLIQIKELPEFLLAEDDDDDE---EEEEEIVYGRGSRAKKETNYNDQLSDKEWLKVIGAEDEEFDDDDEDDEEIKKPGKRVKRKKREDEEVEDEFANQNRKKKKSSAK------RLQKKMATLMQIVVQYKDQ------------------DERVLSEPFMKLPSKKELPDYYEVIKRPVDIARIMNKIADGKYEDVDAMEKDFVLMCANTQKYNEDGSLIYEDSIVLQSVFTNARERL 1346 M PSP P ++ P + T P + ++ I+ + ++G+ D P + Q Q MS P GAP G P PGA PG P P + F Q+ QLRAQI+AY+ LAR QPLP + +AV GK RP G GP + GPS P P PAPGGR P P P +P + K +R++P+ KP G+DP+ +LQERE RL AR+AHRI EL NLP S+ D RTKA +EL+ALRLLNFQRQLR EVVAC RRDTTLETA+N KAYKR+KRQ LREAR TEKLEKQQ++E ER+RRQKHQEYLN++L H +D + +HR+ GKIQKL+KAV WHAN EREQKKE ERIEKER+RRLMAEDEEGYRKLIDQKKD+RLA+LL QTDEY+ LT++V +HK Q +++K+ + A+ E A G +DESSQMSD+ V V TGK++ G AP AS+L++WLE NPG+E PR + + D + EE E A+ I+ AK++ E YYT+AH ISE + +Q+ +L+ G LK YQ++GLEW+VSLYNN LNGILADEMGLGKTIQTIALITYLME K+ GPYLIIVPLSTLSNW EF+KWAP+ +SYKG+PA RR+ +R KFNVL+TTYEY+IKDK +L+KIRWKYMI+DEGHRMKNHHCKLTQ+LNT Y + R+LLTGTPLQNKLPELWALLNFLLP+IFK+C+TFEQWFNAPFA+TGE+V+LNEEETILIIRRLHKVLRPFLLRRLKK+VESQLP+KVEY++KC+MS LQ+ LY HMQ KG++ TD K KGK GAK LMNTIMQLRK+CNHP+M+Q IEE++A+H+G ++ G ++YR+SGKFEL+DRILPKL+AT HRVL+FCQMT MTI+EDYF +R F +LRLDG TKSEDRA +LK FNE S YFIFLLSTRAGGLGLNLQ ADTVVIFDSDWNPHQDLQAQDRAHRIGQ+NEVRVLRL TVNSVEE+ILAAA++KLN+D+KVIQAG F+ +S+ ERR LQ+IL +EE EEE+EVPDDE +NQMIAR E+EF+ F +MD+DRRRE+A P RK RL++ ELP +++ +D + + EEEEE ++GRGSR +++ +Y+D L++K+WL+ I E + +E +EE++ ++ +R +D ED + R+ + + K +L K+M ++ V+ YKD+ R LSE F++LPS+KELP+YYE+I++PVD +I +I + KY + +EKD +L+C N Q +N +GS IYEDSIVLQSVF +AR+++ Sbjct: 44 MGPSPGPPSVSHPMPTMGSTDFPQEGMHQMHKPIDGIHDKGIVEDIHCGSMKGTGMRPPHPGMGPPQSPMDQHSQGYMSPHPSPLGAPEHVSSPMSGGGPTPPQMPPSQPGALIPGDPQAMSQPNRGPSPFSPVQLHQLRAQILAYKMLARGQPLPETLQLAVQGKRTLPGLQQQQQQQQQQQQQQQQQQQQQQQPQQQPPQPQTQQQQQPALVNYNRPSGPGPELS---GPSTPQKLP------------VPAPGGRPSPAPPAAAQPPAAAVPGPSVPQP---APGQPSPVLQLQQKQSRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELENLPGSLPPDLRTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHANTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVWEHKQAQAAKEKKKRRRRKKKAEENAEGGESALGPDGEPIDESSQMSDLPVKVTHTETGKVLFGPEAPKASQLDAWLEMNPGYEVAPRSDSEESDSDYEEEDEEEESSRQETEEKILLDPNSEEVSE--KDAKQIIETAKQDVDDEYSMQYSARGSQSYYTVAHAISERVEKQSALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDRRREDAR-NPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQWLRAI-----EDGNLEEMEEEVRLKKRKRRRNVDKDPAKEDVEKAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVINYKDRCNVEKVPSNSQLEIEGNSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKI 1506
BLAST of homeotic gene vs. SwissProt
Match: gi|123790047|sp|Q3TKT4.1|SMCA4_MOUSE (RecName: Full=Transcription activator BRG1; AltName: Full=ATP-dependent helicase SMARCA4; AltName: Full=BRG1-associated factor 190A; Short=BAF190A; AltName: Full=Protein brahma homolog 1; AltName: Full=SNF2-beta; AltName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 4) HSP 1 Score: 1398.65 bits (3619), Expect = 0.000e+0 Identity = 740/1234 (59.97%), Postives = 916/1234 (74.23%), Query Frame = 0 Query: 196 PPNMQAPAPGGRGPTPNTTGPTGGTPGVAPTGKPNRVTPVAKPAGIDPITLLQERENRLAARVAHRIDELSNLPVSMADDTRTKAEIELRALRLLNFQRQLRAEVVACTRRDTTLETAINVKAYKRTKRQGLREARATEKLEKQQRLEAERRRRQKHQEYLNAVLTHGRDLQNFHRNNLGKIQKLNKAVLNWHANHEREQKKEQERIEKERLRRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYINQLTDMVKQHKVEQVQKQKELRKKAKLEEQA----------GAMLDESSQMSDVRVHVKELSTGKIIRGDNAPLASELESWLEKNPGFEQVPR-------------------------------------DEDSDDSDGEEKPETTSSAEAILAKAKEEATKEDEGDGVD---------YYTIAHTISEEITEQAPMLVGGKLKEYQVKGLEWLVSLYNNCLNGILADEMGLGKTIQTIALITYLMERKKNMGPYLIIVPLSTLSNWALEFEKWAPACNVVSYKGSPAARRTAQNAMRGSKFNVLVTTYEYVIKDKAMLSKIRWKYMIIDEGHRMKNHHCKLTQILNTFYTSNNRLLLTGTPLQNKLPELWALLNFLLPSIFKACNTFEQWFNAPFAITGEKVELNEEETILIIRRLHKVLRPFLLRRLKKDVESQLPDKVEYIVKCEMSGLQRTLYNHMQEKGVMKTD---KINKGKKGAKALMNTIMQLRKLCNHPFMYQPIEEAYAKHIGMPTDIVTGPDVYRSSGKFELIDRILPKLKATGHRVLMFCQMTQCMTIIEDYFNYRGFKFLRLDGMTKSEDRADMLKIFNEKASDYFIFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARFKLNMDEKVIQAGRFNNRSTGSERRELLQSILRADEEEEEENEVPDDEVINQMIARSEDEFEKFTQMDLDRRREEAALGPNRKDRLIQIKELPEFLLAEDDDDDE---EEEEEIVYGRGSRAKKETNYNDQLSDKEWLKVIGAEDEEFDDDDEDDEEIKKPGKRVKRKKREDEEV-------------EDEFANQNRKKKKSSAKRLQ-------KKMATLMQIVVQYKDQDERVLSEPFMKLPSKKELPDYYEVIKRPVDIARIMNKIADGKYEDVDAMEKDFVLMCANTQKYNEDGSLIYEDSIVLQSVFTNARERLD 1347 PP Q+P P P V K +R+TP+ KP G+DP+ +LQERE RL AR+AHRI EL NLP S+A D RTKA IEL+ALRLLNFQRQLR EVV C RRDT LETA+N KAYKR+KRQ LREAR TEKLEKQQ++E ER+RRQKHQEYLN++L H +D + +HR+ GK+QKL KAV +HAN EREQKKE ERIEKER+RRLMAEDEEGYRKLIDQKKDKRLA+LL QTDEY+ LT++V+QHK QV K+K+ +KK K E A G LDE+SQMSD+ V V + +GKI+ G +AP A +LE+WLE NPG+E PR D DSDD + A I+ AK++ D+ GV YY +AH ++E + +Q+ ++V G LK+YQ+KGLEWLVSLYNN LNGILADEMGLGKTIQTIALITYLME K+ GP+LIIVPLSTLSNWA EF+KWAP+ VSYKGSPAARR +R KFNVL+TTYEY+IKDK +L+KIRWKYMI+DEGHRMKNHHCKLTQ+LNT Y + RLLLTGTPLQNKLPELWALLNFLLP+IFK+C+TFEQWFNAPFA+TGEKV+LNEEETILIIRRLHKVLRPFLLRRLKK+VE+QLP+KVEY++KC+MS LQR LY HMQ KGV+ TD K KGK G K LMNTIMQLRK+CNHP+M+Q IEE++++H+G IV G D+YR+SGKFEL+DRILPKL+AT H+VL+FCQMT MTI+EDYF YRGFK+LRLDG TK+EDR +LK FNE S+YFIFLLSTRAGGLGLNLQ+ADTV+IFDSDWNPHQDLQAQDRAHRIGQ+NEVRVLRL TVNSVEE+ILAAA++KLN+D+KVIQAG F+ +S+ ERR LQ+IL +E++EEE+EVPDDE +NQMIAR E+EF+ F +MDLDRRREEA P RK RL++ ELP +++ +D + + EEEEE ++GRGSR +KE +Y+D L++K+WLK I E E +EE+++ K+ RK++ D E +DE + + +K+ + A++L KKM ++ V++YKD R LSE F++LPS+KELP+YYE+I++PVD +I +I + KY ++ +EKD +L+C N Q +N +GSLIYEDSIVLQSVFT+ R++++ Sbjct: 327 PPQTQSPG-----------QPAQPAPLVPLHQKQSRITPIQKPRGLDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFREYHRSVTGKLQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIGPDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEESGSEEEEEEEEEEQPQPAQPPTLPVEEKKKIPDPDSDDV-------SEVDARHIIENAKQDV---DDEYGVSQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDEEEDEVPDDETVNQMIARHEEEFDLFMRMDLDRRREEAR-NPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYSDSLTEKQWLKAIEEGTLE-----EIEEEVRQ--KKSSRKRKRDSEAGSSTPTTSTRSRDKDEESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIE 1531 HSP 2 Score: 85.8853 bits (211), Expect = 2.207e-15 Identity = 71/185 (38.38%), Postives = 87/185 (47.03%), Query Frame = 0 Query: 40 MRPSPSPSPMTGPPNSYPPTQGP---PSD-LQKLQNSINQMEERGMQNDPRYNQARQLHQNMMSRQG--PPPG-----APGAP-------------PGAGPPGGP---AGPPG--------QDKGQ-------FQNPQMLQLRAQIMAYRFLARNQPLPPQIAMAVSGKRP----EGQGPPGAPP 178 M PSP P P G P PTQGP P D + ++ + M E+GM +DPRYNQ + + + G PPP + G P P +GP GP +GP G Q GQ F Q+ QLRAQIMAY+ LAR QPLP + MAV GKRP + Q P PP Sbjct: 43 MGPSPGP-PSAGHPM---PTQGPGGYPQDNMHQMHKPMESMHEKGMPDDPRYNQMKGMGMRSGAHTGMAPPPSPMDQHSQGYPSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGSDPQALGQQNRGPTPFNQNQLHQLRAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPP 223
BLAST of homeotic gene vs. SwissProt
Match: gi|81914599|sp|Q8K1P7.1|SMCA4_RAT (RecName: Full=Transcription activator BRG1; AltName: Full=ATP-dependent helicase SMARCA4; AltName: Full=BRG1-associated factor 190A; Short=BAF190A; AltName: Full=Protein brahma homolog 1; AltName: Full=SNF2-beta; AltName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 4) HSP 1 Score: 1396.33 bits (3613), Expect = 0.000e+0 Identity = 739/1234 (59.89%), Postives = 915/1234 (74.15%), Query Frame = 0 Query: 196 PPNMQAPAPGGRGPTPNTTGPTGGTPGVAPTGKPNRVTPVAKPAGIDPITLLQERENRLAARVAHRIDELSNLPVSMADDTRTKAEIELRALRLLNFQRQLRAEVVACTRRDTTLETAINVKAYKRTKRQGLREARATEKLEKQQRLEAERRRRQKHQEYLNAVLTHGRDLQNFHRNNLGKIQKLNKAVLNWHANHEREQKKEQERIEKERLRRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYINQLTDMVKQHKVEQVQKQKELRKKAKLEEQA----------GAMLDESSQMSDVRVHVKELSTGKIIRGDNAPLASELESWLEKNPGFEQVPR-------------------------------------DEDSDDSDGEEKPETTSSAEAILAKAKEEATKEDEGDGVD---------YYTIAHTISEEITEQAPMLVGGKLKEYQVKGLEWLVSLYNNCLNGILADEMGLGKTIQTIALITYLMERKKNMGPYLIIVPLSTLSNWALEFEKWAPACNVVSYKGSPAARRTAQNAMRGSKFNVLVTTYEYVIKDKAMLSKIRWKYMIIDEGHRMKNHHCKLTQILNTFYTSNNRLLLTGTPLQNKLPELWALLNFLLPSIFKACNTFEQWFNAPFAITGEKVELNEEETILIIRRLHKVLRPFLLRRLKKDVESQLPDKVEYIVKCEMSGLQRTLYNHMQEKGVMKTD---KINKGKKGAKALMNTIMQLRKLCNHPFMYQPIEEAYAKHIGMPTDIVTGPDVYRSSGKFELIDRILPKLKATGHRVLMFCQMTQCMTIIEDYFNYRGFKFLRLDGMTKSEDRADMLKIFNEKASDYFIFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARFKLNMDEKVIQAGRFNNRSTGSERRELLQSILRADEEEEEENEVPDDEVINQMIARSEDEFEKFTQMDLDRRREEAALGPNRKDRLIQIKELPEFLLAEDDDDDE---EEEEEIVYGRGSRAKKETNYNDQLSDKEWLKVIGAEDEEFDDDDEDDEEIKKPGKRVKRKKREDEEV-------------EDEFANQNRKKKKSSAKRLQ-------KKMATLMQIVVQYKDQDERVLSEPFMKLPSKKELPDYYEVIKRPVDIARIMNKIADGKYEDVDAMEKDFVLMCANTQKYNEDGSLIYEDSIVLQSVFTNARERLD 1347 PP Q+P P P V K +R+TP+ KP G+DP+ +LQERE RL AR+ HRI EL NLP S+A D RTKA IEL+ALRLLNFQRQLR EVV C RRDT LETA+N KAYKR+KRQ LREAR TEKLEKQQ++E ER+RRQKHQEYLN++L H +D + +HR+ GK+QKL KAV +HAN EREQKKE ERIEKER+RRLMAEDEEGYRKLIDQKKDKRLA+LL QTDEY+ LT++V+QHK QV K+K+ +KK K E A G LDE+SQMSD+ V V + +GKI+ G +AP A +LE+WLE NPG+E PR D DSDD + A I+ AK++ D+ GV YY +AH ++E + +Q+ ++V G LK+YQ+KGLEWLVSLYNN LNGILADEMGLGKTIQTIALITYLME K+ GP+LIIVPLSTLSNWA EF+KWAP+ VSYKGSPAARR +R KFNVL+TTYEY+IKDK +L+KIRWKYMI+DEGHRMKNHHCKLTQ+LNT Y + RLLLTGTPLQNKLPELWALLNFLLP+IFK+C+TFEQWFNAPFA+TGEKV+LNEEETILIIRRLHKVLRPFLLRRLKK+VE+QLP+KVEY++KC+MS LQR LY HMQ KGV+ TD K KGK G K LMNTIMQLRK+CNHP+M+Q IEE++++H+G IV G D+YR+SGKFEL+DRILPKL+AT H+VL+FCQMT MTI+EDYF YRGFK+LRLDG TK+EDR +LK FNE S+YFIFLLSTRAGGLGLNLQ+ADTV+IFDSDWNPHQDLQAQDRAHRIGQ+NEVRVLRL TVNSVEE+ILAAA++KLN+D+KVIQAG F+ +S+ ERR LQ+IL +E++EEE+EVPDDE +NQMIAR E+EF+ F +MDLDRRREEA P RK RL++ ELP +++ +D + + EEEEE ++GRGSR +KE +Y+D L++K+WLK I E E +EE+++ K+ RK++ D E +DE + + +K+ + A++L KKM ++ V++YKD R LSE F++LPS+KELP+YYE+I++PVD +I +I + KY ++ +EKD +L+C N Q +N +GSLIYEDSIVLQSVFT+ R++++ Sbjct: 327 PPQTQSPG-----------QPAQPAPLVPLHQKQSRITPIQKPRGLDPVEILQEREYRLQARIVHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFREYHRSVTGKLQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIGPDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEESGSEEEEEEEEEEQPQPAQPPTLPVEEKKKIPDPDSDDV-------SEVDARHIIENAKQDV---DDEYGVSQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDEEEDEVPDDETVNQMIARHEEEFDLFMRMDLDRRREEAR-NPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYSDSLTEKQWLKAIEEGTLE-----EIEEEVRQ--KKSSRKRKRDSEAGSSTPTTSTRSRDKDEESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIE 1531 HSP 2 Score: 86.6557 bits (213), Expect = 1.212e-15 Identity = 73/189 (38.62%), Postives = 88/189 (46.56%), Query Frame = 0 Query: 40 MRPSPSPSPMTGPPNSYPPTQGP---PSD-LQKLQNSINQMEERGMQNDPRYNQARQL------HQNMMSRQGPPPG-----APGAP-------------PGAGPPGGP---AGPPG--------QDKGQ-------FQNPQMLQLRAQIMAYRFLARNQPLPPQIAMAVSGKRP----EGQGPPGAPP 178 M PSP P P G P PTQGP P D + ++ + M E+GM +DPRYNQ + + H M GPPP + G P P +GP GP +GP G Q GQ F Q+ QLRAQIMAY+ LAR QPLP + MAV GKRP + Q P PP Sbjct: 43 MGPSPGP-PSAGHPM---PTQGPGGYPQDNMHQMHKPMESMHEKGMPDDPRYNQMKGMGMRSGAHTGM----GPPPSPMDQHSQGYPSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGSDPQALGQQNRGPTPFNQNQLHQLRAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPP 223
BLAST of homeotic gene vs. SwissProt
Match: gi|288559138|sp|A7Z019.1|SMCA4_BOVIN (RecName: Full=Transcription activator BRG1; AltName: Full=ATP-dependent helicase SMARCA4; AltName: Full=BRG1-associated factor 190A; Short=BAF190A; AltName: Full=Protein brahma homolog 1; AltName: Full=SNF2-beta; AltName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 4) HSP 1 Score: 1394.79 bits (3609), Expect = 0.000e+0 Identity = 739/1235 (59.84%), Postives = 916/1235 (74.17%), Query Frame = 0 Query: 196 PPNMQAPAPGGRGPTPNTTGPTGGTPGVAPTGKPNRVTPVAKPAGIDPITLLQERENRLAARVAHRIDELSNLPVSMADDTRTKAEIELRALRLLNFQRQLRAEVVACTRRDTTLETAINVKAYKRTKRQGLREARATEKLEKQQRLEAERRRRQKHQEYLNAVLTHGRDLQNFHRNNLGKIQKLNKAVLNWHANHEREQKKEQERIEKERLRRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYINQLTDMVKQHKVEQVQKQKELRKKAKLEEQA----------GAMLDESSQMSDVRVHVKELSTGKIIRGDNAPLASELESWLEKNPGFEQVPR-------------------------------------DEDSDDSDGEEKPETTSSAEAILAKAKEEATKEDEGDGVD---------YYTIAHTISEEITEQAPMLVGGKLKEYQVKGLEWLVSLYNNCLNGILADEMGLGKTIQTIALITYLMERKKNMGPYLIIVPLSTLSNWALEFEKWAPACNVVSYKGSPAARRTAQNAMRGSKFNVLVTTYEYVIKDKAMLSKIRWKYMIIDEGHRMKNHHCKLTQILNTFYTSNNRLLLTGTPLQNKLPELWALLNFLLPSIFKACNTFEQWFNAPFAITGEKVELNEEETILIIRRLHKVLRPFLLRRLKKDVESQLPDKVEYIVKCEMSGLQRTLYNHMQEKGVMKTD---KINKGKKGAKALMNTIMQLRKLCNHPFMYQPIEEAYAKHIGMPTDIVTGPDVYRSSGKFELIDRILPKLKATGHRVLMFCQMTQCMTIIEDYFNYRGFKFLRLDGMTKSEDRADMLKIFNEKASDYFIFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARFKLNMDEKVIQAGRFNNRSTGSERRELLQSILRADEEEEEENEVPDDEVINQMIARSEDEFEKFTQMDLDRRREEAALGPNRKDRLIQIKELPEFLLAEDDDDDE---EEEEEIVYGRGSRAKKETNYNDQLSDKEWLKVIGAEDEEFDDDDEDDEEIKKPGKRVKRKKREDEEV-------------EDEFANQNRKKKKSSAKRLQ-------KKMATLMQIVVQYKDQDE-RVLSEPFMKLPSKKELPDYYEVIKRPVDIARIMNKIADGKYEDVDAMEKDFVLMCANTQKYNEDGSLIYEDSIVLQSVFTNARERLD 1347 PP Q+P P P V K +R+TP+ KP G+DP+ +LQERE RL AR+AHRI EL NLP S+A D RTKA IEL+ALRLLNFQRQLR EVV C RRDT LETA+N KAYKR+KRQ LREAR TEKLEKQQ++E ER+RRQKHQEYLN++L H +D + +HR+ GKIQKL KAV +HAN EREQKKE ERIEKER+RRLMAEDEEGYRKLIDQKKDKRLA+LL QTDEY+ LT++V+QHK QV K+K+ +KK K E A G LDE+SQMSD+ V V + +GKI+ G +AP A +LE+WLE NPG+E PR D DSDD + A I+ AK++ D+ GV YY +AH ++E + +Q+ ++V G LK+YQ+KGLEWLVSLYNN LNGILADEMGLGKTIQTIALITYLME K+ GP+LIIVPLSTLSNWA EF+KWAP+ VSYKGSPAARR +R KFNVL+TTYEY+IKDK +L+KIRWKYMI+DEGHRMKNHHCKLTQ+LNT Y + RLLLTGTPLQNKLPELWALLNFLLP+IFK+C+TFEQWFNAPFA+TGEKV+LNEEETILIIRRLHKVLRPFLLRRLKK+VE+QLP+KVEY++KC+MS LQR LY HMQ KGV+ TD K KGK G K LMNTIMQLRK+CNHP+M+Q IEE++++H+G IV G D+YR+SGKFEL+DRILPKL+AT H+VL+FCQMT MTI+EDYF YRGFK+LRLDG TK+EDR +LK FNE S+YFIFLLSTRAGGLGLNLQ+ADTV+IFDSDWNPHQDLQAQDRAHRIGQ+NEVRVLRL TVNSVEE+ILAAA++KLN+D+KVIQAG F+ +S+ ERR LQ+IL +E++EEE+EVPDDE +NQMIAR E+EF+ F +MDLDRRREEA P RK RL++ ELP +++ +D + + EEEEE ++GRGSR +KE +Y+D L++K+WLK I E E +EE+++ K+ RK++ D + +D+ + + +K+ + A++L KKM ++ V++YKD R LSE F++LPS+KELP+YYE+I++PVD +I +I + KY ++ +EKD +L+C N Q +N +GSLIYEDSIVLQSVFT+ R++++ Sbjct: 319 PPQTQSPG-----------QPAQPAPMVPLHQKQSRITPIQKPRGLDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIGPDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEESGSEEEEEEEEEEQPQPAQPPTLPVEEKKKIPDPDSDDV-------SEVDARHIIENAKQDV---DDEYGVSQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDEEEDEVPDDETVNQMIARHEEEFDLFMRMDLDRRREEAR-NPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYSDSLTEKQWLKAIEEGTLE-----EIEEEVRQ--KKSSRKRKRDSDAGPSTPTTSTRSRDKDDESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIE 1524
BLAST of homeotic gene vs. SwissProt
Match: gi|81884744|sp|Q6DIC0.1|SMCA2_MOUSE (RecName: Full=Probable global transcription activator SNF2L2; AltName: Full=ATP-dependent helicase SMARCA2; AltName: Full=BRG1-associated factor 190B; Short=BAF190B; AltName: Full=Protein brahma homolog; AltName: Full=SNF2-alpha; AltName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2) HSP 1 Score: 1391.33 bits (3600), Expect = 0.000e+0 Identity = 729/1257 (58.00%), Postives = 925/1257 (73.59%), Query Frame = 0 Query: 148 FLARNQPLPPQIAMAVSGK----RPEGQGPPGAPPYGPSRPGGPPGSASPGGPPNMQAPAPGGRGPTPNTTGPTGGTPGVAPTGKPNRVTPVAKPAGIDPITLLQERENRLAARVAHRIDELSNLPVSMADDTRTKAEIELRALRLLNFQRQLRAEVVACTRRDTTLETAINVKAYKRTKRQGLREARATEKLEKQQRLEAERRRRQKHQEYLNAVLTHGRDLQNFHRNNLGKIQKLNKAVLNWHANHEREQKKEQERIEKERLRRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYINQLTDMVKQHKVEQVQKQKELRKKAKLEEQA------------GAMLDESSQMSDVRVHVKELSTGKIIRGDNAPLASELESWLEKNPGFEQVPRDEDSD-------------------------DSDGEEKPETTSSAEAILAKAKEEATKE-----DEGDGVDYYTIAHTISEEITEQAPMLVGGKLKEYQVKGLEWLVSLYNNCLNGILADEMGLGKTIQTIALITYLMERKKNMGPYLIIVPLSTLSNWALEFEKWAPACNVVSYKGSPAARRTAQNAMRGSKFNVLVTTYEYVIKDKAMLSKIRWKYMIIDEGHRMKNHHCKLTQILNTFYTSNNRLLLTGTPLQNKLPELWALLNFLLPSIFKACNTFEQWFNAPFAITGEKVELNEEETILIIRRLHKVLRPFLLRRLKKDVESQLPDKVEYIVKCEMSGLQRTLYNHMQEKGVMKTD---KINKGKKGAKALMNTIMQLRKLCNHPFMYQPIEEAYAKHIGMPTDIVTGPDVYRSSGKFELIDRILPKLKATGHRVLMFCQMTQCMTIIEDYFNYRGFKFLRLDGMTKSEDRADMLKIFNEKASDYFIFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARFKLNMDEKVIQAGRFNNRSTGSERRELLQSILRADEEEEEENEVPDDEVINQMIARSEDEFEKFTQMDLDRRREEAALGPNRKDRLIQIKELPEFLLAEDDDDDE---EEEEEIVYGRGSRAKKETNYNDQLSDKEWLKVIGAEDEEFDDDDEDDEEIKKPGKRVKRKKREDEEVEDEFANQNRKKKKSSAK------RLQKKMATLMQIVVQYKDQDERVLSEPFMKLPSKKELPDYYEVIKRPVDIARIMNKIADGKYEDVDAMEKDFVLMCANTQKYNEDGSLIYEDSIVLQSVFTNARERL 1346 ++ N+P P + +SG+ + P G P P P +A PG P++Q PAPG P + K +R++P+ KP G+DP+ +LQERE RL AR+AHRI EL +LP S+ D RTKA +EL+ALRLLNFQRQLR EVVAC RRDTTLETA+N KAYKR+KRQ LREAR TEKLEKQQ++E ER+RRQKHQEYLN++L H +D + +HR+ GKIQKL+KAV WHAN EREQKKE ERIEKER+RRLMAEDEEGYRKLIDQKKD+RLA+LL QTDEY+ LT++V +HK Q K+K+ R++ K + + G +DESSQMSD+ V V TGK++ G AP AS+L++WLE NPG+E PR + + D + EE E A+ I+ AK++ E YYT+AH ISE + +Q+ +L+ G LK YQ++GLEW+VSLYNN LNGILADEMGLGKTIQTIALITYLME K+ GPYLIIVPLSTLSNW EF+KWAP+ +SYKG+PA RR+ +R KFNVL+TTYEY+IKDK +L+KIRWKYMI+DEGHRMKNHHCKLTQ+LNT Y + R+LLTGTPLQNKLPELWALLNFLLP+IFK+C+TFEQWFNAPFA+TGE+V+LNEEETILIIRRLHKVLRPFLLRRLKK+VESQLP+KVEY++KC+MS LQ+ LY HMQ KG++ TD K KGK GAK LMNTIMQLRK+CNHP+M+Q IEE++A+H+G ++ G ++YR+SGKFEL+DRILPKL+AT HRVL+FCQMT MTI+EDYF +R F +LRLDG TKSEDRA +LK FNE S YFIFLLSTRAGGLGLNLQ ADTVVIFDSDWNPHQDLQAQDRAHRIGQ+NEVRVLRL TVNSVEE+ILAAA++KLN+D+KVIQAG F+ +S+ ERR LQ+IL +EE EEE+EVPDDE +NQMIAR E+EF+ F +MD+DRRRE+A P RK RL++ ELP +++ +D + + EEEEE ++GRGSR +++ +Y+D L++K+WL+ I E + +E +EE++ ++ +R +D ED + R+ + + K +L K+M ++ V+ YKD R LSE F++LPS+K+LP+YYE+I++PVD +I +I + KY + +EKD +L+C N Q +N +GS IYEDSIVLQSVF +AR+++ Sbjct: 259 LVSYNRPSGPGQELLLSGQSAPQKLSAPAPSGRPSPAPQAAVQPTATAVPG--PSVQQPAPGQPSPV------------LQLQQKQSRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELESLPGSLPPDLRTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHANTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVWEHKQAQAAKEKKKRRRRKKKAEENAEGGEPALGPDGEPIDESSQMSDLPVKVTHTETGKVLFGPEAPKASQLDAWLEMNPGYEVAPRSDSEESESDYEEEDEEEESSRQETEEKILLDPNSEEVSE--KDAKQIIETAKQDVDDEYSMQYSARGSQSYYTVAHAISERVEKQSALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDRRREDAR-NPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQWLRAI-----EDGNLEEMEEEVRLKKRKRRRNVDKDPVKEDVEKAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVINYKDSSGRQLSEVFIQLPSRKDLPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKI 1493 HSP 2 Score: 60.077 bits (144), Expect = 1.644e-7 Identity = 47/161 (29.19%), Postives = 66/161 (40.99%), Query Frame = 0 Query: 40 MRPSPSPSPMTGPPNSYPPTQGPPSDLQKLQNSINQMEERGMQNDPRY-----NQARQLHQNMMSRQGP--------------------------PPGAPGAPPGAGPPGGPAG--PPGQDKGQFQNPQMLQLRAQIMAYRFLARNQPLPPQIAMAVSGKR 167 M PSP P ++ P ++ P + +L ++ + ++G+ D R H M Q P PP P + PGA PG P P + F Q+ QLRAQI+AY+ LAR QPLP + +AV GKR Sbjct: 44 MGPSPGPPSVSHPLSTMGSADFPQEGMHQLHKPMDGIHDKGIVEDVHCGSMKGTSMRPPHPGMGPPQSPMDQHSQGYMSPHPSPLGAPEHVSSPTPPQMPPSQPGALIPGDPQAMNQPNRGPSPFSPVQLHQLRAQILAYKMLARGQPLPETLQLAVQGKR 204
BLAST of homeotic gene vs. SwissProt
Match: gi|46397098|sp|O94421.2|SNF22_SCHPO (RecName: Full=SWI/SNF chromatin-remodeling complex subunit snf22; AltName: Full=ATP-dependent helicase snf22; AltName: Full=SWI/SNF complex subunit snf22) HSP 1 Score: 822.772 bits (2124), Expect = 0.000e+0 Identity = 473/1141 (41.45%), Postives = 669/1141 (58.63%), Query Frame = 0 Query: 232 VTPVAKPAGIDPITLLQERENRLAARVAHRIDELS--NLPVS----MADDTRTKAEIELRALRLLNFQRQLRAEVVACTRRDTTLETAINVKAYKRTKRQGLREARATEKLEKQQRLEAERRRRQKHQEYLNAVLTHGRDLQNFHRNNLGKIQKLNKAVLNWHANHEREQKKEQERIEKERLRRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYINQLTDMVKQHKVEQVQKQKELRKKAKLEEQAGAMLDESSQMSDVRVHVKELSTGKIIRGDNAPLASELESWLEKNPGFEQVPRDEDSDDSDGEEKPETTSSAEAILAKAKEEATKEDEGDGVDYYTIAHTISEEITEQAPMLVGGKLKEYQVKGLEWLVSLYNNCLNGILADEMGLGKTIQTIALITYLMERKKNMGPYLIIVPLSTLSNWALEFEKWAPACNVVSYKGSPAARRTAQNAMRGSKFNVLVTTYEYVIKDKAMLSKIRWKYMIIDEGHRMKNHHCKLTQILNTFYTSNNRLLLTGTPLQNKLPELWALLNFLLPSIFKACNTFEQWFNAPFAITG--EKVELNEEETILIIRRLHKVLRPFLLRRLKKDVESQLPDKVEYIVKCEMSGLQRTLYNHMQEKGVMKTDKINKGKKGAKALMNTIMQLRKLCNHPFMYQPIEEAYAKHIGMPTDIVTGPDVYRSSGKFELIDRILPKLKATGHRVLMFCQMTQCMTIIEDYFNYRGFKFLRLDGMTKSEDRADMLKIFNEKASDYFIFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARFKLNMDEKVIQAGRFNNRSTGSERRELLQSILRADEEEEEE---NEVPDDEVINQMIARSEDEFEKFTQMDLDRRREEAALGPNRKDRLIQIKELPEFLLAEDDD---DDEEEEEEIVYGRGSRAKKETNYNDQLSDKEWLKVIGAEDEEFDDDDEDDEEIKKPGKRVKRKKREDE--------EVEDEFANQNRKKKKS-SAKRLQKKMATLMQIVVQYKDQDERVLSEPFMKLPSKKELPDYYEVIKRPVDIARIMNKIADGKYEDVDAMEKDFVLMCANTQKYNEDGSLIYEDSIVLQSVFTNARERLDAD 1349 + P P I + E +A +A+RID L N P S + ++K+ IELR LRLL QR LR + + +L ++ KRQ ++EA L ++Q+ E R+++K +LTH LR +M +RK I K DK Q + D++ H + +++K + + A+ QA DE++ +++ L K R + L + + +LE + R + S+ G + ++SAE EA +E +DY+ +AH I EE+ EQ + VGG LK+YQ+KGLEW++SLYNN LNGILADEMGLGKTIQTIA ITYL+E+K GP+LIIVPLSTL+NW +EFEKWAP+ ++YKG P R+T Q+ +R S FNVL+TT+EY+IKD+ +LS+I+W +MIIDEGHR+KN KLT L+T+Y S RL+LTGTPLQN LPELWALLNF+LP IF + +F++WFN PFA TG +K+ LNEEE +LII+RLHKVLRPFL RRLKKDVE +LPDKVE ++KC +SGLQ LY M++ G++ D KGK G K L NT+MQL+K+CNHPF+++ +E A G D+ ++R++GKFEL+DRILPKL TGH+ LMF QMTQ MTI+EDY + +K+LRLDG TKS+DR +L FN+ SD +IF+LSTRAGGLGLNLQTADTV+IFD+DWNPHQDLQAQDRAHRIGQ EVR+LRL+T S+EE IL+ A++KL++D KVIQAG+F+N+ST ER L+S+L D +++ + E+ DDE +N++I+R+++E F ++D +R + +RL+ + ELP+F E D E E+ R R + +Y + D E + D D P KR + +K+ + E A RK S K L++ + + + + +D R ++ F+ P++K PDYY +IKRP+ + +I I + +Y DV + DF+LM N YNE+ S++YED+ +++ E L+ + Sbjct: 590 LIPSLLPPSISWDDVFLSSEIAIACSIANRIDFLEKENRPKSVNKKILQQDKSKSMIELRCLRLLEKQRSLRETINSVIPHSDSLAAGNLRLMFRNVKRQTMQEANLVLALAEKQKTEHAMRQKEK-------LLTH--------------------------------------------LRSIML-----HRKSIVTKVDK-------QNKAKTQRCKDIINFHAHLEKEEKKRIERSARQRLQALRADDEAA-------YLQLLDKAKDTRITH--LLKQTDQYLE---NLTRAVRIQQSNIHSGNTSGKGSNSAEL-------EAPISEEDKNLDYFKVAHRIHEEV-EQPKIFVGGTLKDYQLKGLEWMLSLYNNNLNGILADEMGLGKTIQTIAFITYLIEKKNQQGPFLIIVPLSTLTNWIMEFEKWAPSVKKIAYKGPPQLRKTLQSQIRSSNFNVLLTTFEYIIKDRPLLSRIKWVHMIIDEGHRIKNTQSKLTSTLSTYYHSQYRLILTGTPLQNNLPELWALLNFVLPKIFNSIKSFDEWFNTPFANTGGQDKIGLNEEEALLIIKRLHKVLRPFLFRRLKKDVEKELPDKVEKVIKCPLSGLQLKLYQQMKKHGMLFVDG-EKGKTGIKGLQNTVMQLKKICNHPFIFEDVERAIDPS-GTNVDL-----LWRAAGKFELLDRILPKLFLTGHKTLMFFQMTQIMTIMEDYLRSKNWKYLRLDGSTKSDDRCSLLAQFNDPKSDVYIFMLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQTKEVRILRLITEKSIEENILSRAQYKLDLDGKVIQAGKFDNKSTPEEREAFLRSLLEHDGDDDHDLTYGELQDDE-LNELISRTDEELVLFKKLDKERAATDIYGKGKPLERLLTVNELPDFYKVEVDSFAVQSSSELEDQYLERKRRRRNSISYTELTLD------------ELNTVD-DPSSTLMPRKRGRPRKKTNSGSSLSTPLSQESSLARSGRKNTPSYKQKALRRYCMEIFERLYNLQSEDGRFVNGLFLYPPNRKLYPDYYIIIKRPIALGKIKRNIKNDRYGDVGELIADFMLMFNNAYTYNEEHSIVYEDAKLMEKTLKEVIEDLEKN 1626
BLAST of homeotic gene vs. SwissProt
Match: gi|46397295|sp|Q9UTN6.1|SNF21_SCHPO (RecName: Full=Chromatin structure-remodeling complex subunit snf21; AltName: Full=ATP-dependent helicase snf21; AltName: Full=RSC complex subunit snf21) HSP 1 Score: 815.068 bits (2104), Expect = 0.000e+0 Identity = 414/803 (51.56%), Postives = 564/803 (70.24%), Query Frame = 0 Query: 563 VDYYTIAHTISEEITEQAPMLVGGKLKEYQVKGLEWLVSLYNNCLNGILADEMGLGKTIQTIALITYLMERKKNMGPYLIIVPLSTLSNWALEFEKWAPACNVVSYKGSPAARRTAQNAMRGSKFNVLVTTYEYVIKDKAMLSKIRWKYMIIDEGHRMKNHHCKLTQILNTFYTSNNRLLLTGTPLQNKLPELWALLNFLLPSIFKACNTFEQWFNAPFAITG--EKVELNEEETILIIRRLHKVLRPFLLRRLKKDVESQLPDKVEYIVKCEMSGLQRTLYNHMQEKGVMKTDKINKGKKGAKALMNTIMQLRKLCNHPFMYQPIEEAYAKHIGMPTDIVTGPDVYRSSGKFELIDRILPKLKATGHRVLMFCQMTQCMTIIEDYFNYRGFKFLRLDGMTKSEDRADMLKIFNEKASDYFIFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARFKLNMDEKVIQAGRFNNRSTGSERRELLQSIL---RADEEEEEENEVPDDEVINQMIARSEDEFEKFTQMDLDRRREEAALGPNR-KDRLIQIKELPEFLLAEDDDDDEEEEEEIVYGRGSRAKKETNYNDQLSDKEWLKVIGAEDEEFDDDDEDDEEIKKPGK-RVKRKKREDEEVEDEFANQNRKKKKSSA---------KRLQKKMATLMQIVVQYKDQDERVLSEPFMKLPSKKELPDYYEVIKRPVDIARIMNKIADGKYEDVDAMEKDFVLMCANTQKYNEDGSLIYEDSIVLQSVFTNARERLDAD 1349 +DYY +AH I E +TEQ +LVGGKLKEYQ++GL+W++SLYNN LNGILADEMGLGKTIQTI+LIT+L+E+K+ GP+L+IVPLSTL+NW +EFE+WAP+ + YKG P R+ +R S F VL+TTYEY+IKD+ +LS+I+W YMIIDEGHRMKN KLT L T+Y+S RL+LTGTPLQN LPELWALLNF+LP IF + +F++WFN PFA TG +K+EL EEE++L+IRRLHKVLRPFLLRRLKKDVE++LPDKVE +++C+MSGLQ+ LY M++ G++ + +GK G K L NT+MQL+K+CNHPF+++ +E + G D+ ++R SGKFEL+DRILPKL +GHR+LMF QMTQ M I+EDY +YR +++LRLDG TK++DR+ +L +FN+ ++ +FLLSTRAGGLGLNLQTADTV+IFDSDWNPHQDLQAQDRAHRIGQ EVR+ RL+T SVEE ILA A++KL++D KVIQAG+F+N+ST ER L+S+L +EE +E+ E+ DDE +N+++AR +DE F QM D R E+ G N+ K+RLIQ+ ELPEF E+ + + +E GRG+R + Y++ + D +W+ + E E +P + R KR +E N KKK+ A L++ + + V + +D + R L++ F++LPSKK PDYY +IK P+ + I I Y+ ++AM+ D + M N + YNE+GS +YED+ +Q+ E L+ D Sbjct: 392 IDYYNVAHNIREVVTEQPSILVGGKLKEYQLRGLQWMISLYNNHLNGILADEMGLGKTIQTISLITHLIEKKRQNGPFLVIVPLSTLTNWTMEFERWAPSIVKIVYKGPPQVRKALHPQVRHSNFQVLLTTYEYIIKDRPLLSRIKWIYMIIDEGHRMKNTQSKLTNTLTTYYSSRYRLILTGTPLQNNLPELWALLNFVLPRIFNSIKSFDEWFNTPFANTGGQDKMELTEEESLLVIRRLHKVLRPFLLRRLKKDVEAELPDKVEKVIRCQMSGLQQKLYYQMKKHGMLYVEDAKRGKTGIKGLQNTVMQLKKICNHPFVFEDVERS-IDPTGFNYDM-----LWRVSGKFELLDRILPKLFRSGHRILMFFQMTQIMNIMEDYLHYRQWRYLRLDGSTKADDRSKLLGVFNDPTAEVNLFLLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQTKEVRIYRLITEKSVEENILARAQYKLDIDGKVIQAGKFDNKSTPEEREAFLRSLLENENGEEENDEKGELDDDE-LNEILARGDDELRLFKQMTEDLER-ESPYGKNKEKERLIQVSELPEFYQREEPEKTTDLLQEEPLGRGARRRTPVVYDEAVRDAQWMAEMDMESE------------ARPTRGRPKRNIASVDETPALTLNGKPKKKRGPAPDTLTSEHRSLLRRVCLEIYKAVNELEDDNGRPLNKLFLELPSKKLYPDYYMIIKSPIALDAIRKHINGTFYKTLEAMKSDLMTMFNNARTYNEEGSFVYEDANKMQTAMETKIEELEED 1174 HSP 2 Score: 123.635 bits (309), Expect = 5.240e-27 Identity = 100/340 (29.41%), Postives = 156/340 (45.88%), Query Frame = 0 Query: 132 QNPQMLQLRAQIMAYRFLARNQPLPPQIAMAVSGKRPEGQGPPGAPPYGPSRPGGPPGSASPGGPPNMQAPAPGGRGPTPNTTGPTGGTPGVAPTGKPNRVTPVAKPAGIDPITLLQERENRLAARVAHRIDELSNLPVSMADDTRTK--------------AEIELRALRLLNFQRQLRAEVVACTRRDTTLETAINVKAYKRTKRQGLREARATEKLEKQQRLEAERRRRQKHQEYLNAVLTHGRDLQNFHRNNLGKIQKLNKAVLNWHANHEREQKKEQERIEKERLRRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYINQLTDMVKQHKVEQVQ 457 +N + L L+ Q++AY+ L++N P P ++V + + + + P + G G+ + P+ K R + + D I R+ R+ +L + P M D K A +EL+ LRL+ Q LR +V+ C T+ A+ + +R K + R TE LE+QQR + ERR +QK +YL V HGR++ +N + QK N+AVL +H++ E+E+++ ER K+RL+ L DEE Y KLIDQ KD R+ LL QTD Y++ L V KV+Q Q Sbjct: 68 KNTEKLILKQQVLAYKKLSQNLPAPDDCILSVLLRLSKDEQLLQSIVKQPLQNSKVDGKVRRDF-----------------------GSCQITPSAKQQRKYLQYQISEDDAI----------KNRMFRRMSDLESYPAVMRDVAELKDDNERLNLDTIKRNALVELKKLRLIKQQESLRHQVMHCQPHLRTIVNAVERMSCRRPKLVP-QATRLTEVLERQQRSDRERRLKQKQCDYLQTVCAHGREINVRTKNAQARAQKANRAVLAYHSHIEKEEQRRAERNAKQRLQALKENDEEAYLKLIDQAKDTRITHLLRQTDHYLDSLAAAV---KVQQSQ 370
BLAST of homeotic gene vs. SwissProt
Match: gi|134589|sp|P22082.1|SNF2_YEAST (RecName: Full=Transcription regulatory protein SNF2; AltName: Full=ATP-dependent helicase SNF2; AltName: Full=Regulatory protein GAM1; AltName: Full=Regulatory protein SWI2; AltName: Full=SWI/SNF complex component SNF2; AltName: Full=Transcription factor TYE3) HSP 1 Score: 771.541 bits (1991), Expect = 0.000e+0 Identity = 450/972 (46.30%), Postives = 621/972 (63.89%), Query Frame = 0 Query: 268 LPVSMADDTRTKAEIELRALRLLNFQRQLRAEVVACTRRDTTLETAINVKAYKRTKRQGLREARATEKLEKQQRLEAERRRRQKHQEYLNAVLTHGRDLQNFHRNNLGKIQKLN--KAVLN--WHANHE--REQKKEQERIEKERLRRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYINQLTDMVKQHKVEQVQKQKELRKKAKLEEQAGAMLDESSQMSDVRVHVKELSTGKIIRGDNAPLASELESWLEKNPGFEQVPRDEDSDDSDGEEKPETTSSAEAILAKAKEEATKEDEGDGVDYYTIAHTISEEITEQAPMLVGGKLKEYQVKGLEWLVSLYNNCLNGILADEMGLGKTIQTIALITYLMERKKNMGPYLIIVPLSTLSNWALEFEKWAPACNVVSYKGSPAARRTAQNAMRGSKFNVLVTTYEYVIKDKAMLSKIRWKYMIIDEGHRMKNHHCKLTQILNTFYTSNNRLLLTGTPLQNKLPELWALLNFLLPSIFKACNTFEQWFNAPFAITG--EKVELNEEETILIIRRLHKVLRPFLLRRLKKDVESQLPDKVEYIVKCEMSGLQRTLYNHM-QEKGVMKTDKINKGKKGAKALMNTIMQLRKLCNHPFMYQPIEEAYAKHIGMPTDIVTGPDVYRSSGKFELIDRILPKLKATGHRVLMFCQMTQCMTIIEDYFNYRGFKFLRLDGMTKSEDRADMLKIFNEKASDYFIFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARFKLNMDEKVIQAGRFNNRSTGSERRELLQSILRADEEEEEENE-------VPDDEVINQMIARSEDEFEKFTQMDLDRRREEAALGPNRKDRLIQIKELPEFL---LAEDDDDDEEEEEEIVYGRGSRAKKETNYNDQLSDKEWLKVIGAEDEEFDDDDEDDEEIKKPGKRVKRKKREDE 1220 LPV + DT T +I + L LN L V C L+ +N + + T+ L + A + L Q+ + + + HQ N++LT N H N L KI+ +N A+L + NHE + ++K+ E + RL+ + Y + D KK+KRL F + N D +Q + E+ K++ KA EE +LD Q D R+ ++R NA L S + + Q ++ DS +E E + EE +D+ VDYY +AH I E+I +Q +LVGG LK+YQ+KGL+W+VSL+NN LNGILADEMGLGKTIQTI+L+TYL E K GPYL+IVPLSTLSNW+ EF KWAP +S+KGSP R+ Q +R +F+V++TT+EY+IK++A+LSK++W +MIIDEGHRMKN KL+ LNT Y ++ RL+LTGTPLQN LPELWALLNF+LP IF + +F++WFN PFA TG +K+EL+EEET+L+IRRLHKVLRPFLLRRLKKDVE +LPDKVE +VKC+MS LQ+ +Y M + + + D+ NK G + N IMQL+K+CNHPF+++ +E+ PT T D++R +GKFEL+DRILPKLKATGHRVL+F QMTQ M I+ED+ Y K+LRLDG TKS++R+++L++FN S+Y F+LSTRAGGLGLNLQTADTV+IFD+DWNPHQDLQAQDRAHRIGQKNEVR+LRL+T NSVEE IL A KL++D KVIQAG+F+N+ST E+ LL+S+L A+EE ++ E D IN+++AR+++E T+MD DR ++E LG K RL++ ELP+ + + +E E + GRG+R +K YND +S+++WL+ E DD+++D++ +K +R K+ED+ Sbjct: 484 LPVGI--DTHTATDI-YQTLIALN----LDTTVNDC------LDKLLNDECTESTRENALYDYYALQLLPLQKAVRGHVLQFEWHQ---NSLLT------NTHPNFLSKIRNINVQDALLTNQLYKNHELLKLERKKTEAVA--RLKSMNKSAINQYNRRQD-KKNKRLKFGHRLIATHTNLERD--EQKRAEKKAKERLQALKANDEEAYIKLLD---QTKDTRI-------THLLRQTNAFLDSLTRAVKD------QQKYTKEMIDSHIKEASEEVDDLSMVPKMKDEEYDDDDDNSNVDYYNVAHRIKEDIKKQPSILVGGTLKDYQIKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTYLYEMKNIRGPYLVIVPLSTLSNWSSEFAKWAPTLRTISFKGSPNERKAKQAKIRAGEFDVVLTTFEYIIKERALLSKVKWVHMIIDEGHRMKNAQSKLSLTLNTHYHADYRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIELSEEETLLVIRRLHKVLRPFLLRRLKKDVEKELPDKVEKVVKCKMSALQQIMYQQMLKYRRLFIGDQNNKKMVGLRGFNNQIMQLKKICNHPFVFEEVEDQIN-----PTR-ETNDDIWRVAGKFELLDRILPKLKATGHRVLIFFQMTQIMDIMEDFLRYINIKYLRLDGHTKSDERSELLRLFNAPDSEYLCFILSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTNSVEEVILERAYKKLDIDGKVIQAGKFDNKSTSEEQEALLRSLLDAEEERRKKRESGVEEEEELKDSEINEILARNDEEMAVLTRMDEDRSKKEEELGV--KSRLLEKSELPDIYSRDIGAELKREESESAAVYNGRGARERKTATYNDNMSEEQWLRQF-----EVSDDEKNDKQARK-----QRTKKEDK 1394 HSP 2 Score: 80.8777 bits (198), Expect = 6.506e-14 Identity = 61/220 (27.73%), Postives = 104/220 (47.27%), Query Frame = 0 Query: 232 VTPVAKPAGIDPITLLQERENRLAARVAHRIDELSN--LPVSMADDTRTKAEIELRALRLLNFQRQLRAEVVACTRRDTTLETAINVKAYKRTKRQGLREARATEKLEKQQRLEAERRRRQKHQEYLNAVLTHGRDLQNFHRNNLGKIQKLNKAVLNWHANHEREQKKEQERIEKERLRRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYINQLTDMVK 449 + P P GID T + +A + +++ + L + TR A + AL+LL Q+ +R V+ +L T + + + +++A T +L K L R++ + L ++ + N ++ K K ++ H N ER+++K E+ KERL+ L A DEE Y KL+DQ KD R+ LL QT+ +++ LT VK Sbjct: 479 IEPGVLPVGIDTHTATDIYQTLIALNLDTTVNDCLDKLLNDECTESTRENALYDYYALQLLPLQKAVRGHVLQFEWHQNSLLTNTHPNFLSKIRNINVQDALLTNQLYKNHELLKLERKKTEAVARLKSMNKSAINQYNRRQDKKNKRLKFGHRLIATHTNLERDEQKRAEKKAKERLQALKANDEEAYIKLLDQTKDTRITHLLRQTNAFLDSLTRAVK 698 HSP 3 Score: 71.633 bits (174), Expect = 4.002e-11 Identity = 36/102 (35.29%), Postives = 57/102 (55.88%), Query Frame = 0 Query: 1239 KRLQKKMATLMQIVVQYKDQDERVLSEPFMKLPSKKELPDYYEVIKRPVDIARIMNKIADGKYEDVDAMEKDFVLMCANTQKYNEDGSLIYEDSIVLQSVFT 1340 +++ K+ L + Y+++ R LS+ F+ PSK PDYY +IK PV I I Y + +DF L+ +N + YN +GS++YEDS+ L+ V T Sbjct: 1548 EKVAKQALDLYHFALNYENEAGRKLSDIFLSKPSKALYPDYYMIIKYPVAFDNINTHIETLAYNSLKETLQDFHLIFSNARIYNTEGSVVYEDSLELEKVVT 1649
BLAST of homeotic gene vs. nr
Match: gi|1000232606|gb|AML25530.1| (ATP-dependent chromatin remodeler brahma [Euschistus heros]) HSP 1 Score: 1642.09 bits (4251), Expect = 0.000e+0 Identity = 890/1534 (58.02%), Postives = 1088/1534 (70.93%), Query Frame = 0 Query: 6 GPPAGAPGPMPVRGGPPGSGPHSPMPPPESP-SPGMRPSPSPSPMTGPPNSYPPTQGPPS-------------------------------DLQKLQNSINQMEERGMQNDPRYNQA---RQLHQNMMSRQGPPPGAPGAPPGAGPPGGPAGPPGQDKGQFQNPQMLQLRAQIMAYRFLARNQPLPPQIAMAVSGKRPEG------QGPPGA----------------------PPYGPSRPGGPPGSASP-----GGPPNMQAPAPGGRGPTPNTTGPTGGTPGV--APTGKPNRVTPVAKPAGIDPITLLQERENRLAARVAHRIDELSNLPVSMADDTRTKAEIELRALRLLNFQRQLRAEVVACTRRDTTLETAINVKAYKRTKRQGLREARATEKLEKQQRLEAERRRRQKHQEYLNAVLTHGRDLQNFHRNNLGKIQKLNKAVLNWHANHEREQKKEQERIEKERLRRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYINQLTDMVKQHKVEQVQKQKELRKKAKLE-----EQAGAMLDESSQMSDVRVHVKELSTGKIIRGDNAPLASELESWLEKNPGFEQV-------------------PRDEDSDDSDGEEKPETTSSAE----AILAKAK-EEATKEDEGDGVDYYTIAHTISEEITEQAPMLVGGKLKEYQVKGLEWLVSLYNNCLNGILADEMGLGKTIQTIALITYLMERKKNMGPYLIIVPLSTLSNWALEFEKWAPACNVVSYKGSPAARRTAQNAMRGSKFNVLVTTYEYVIKDKAMLSKIRWKYMIIDEGHRMKNHHCKLTQILNTFYTSNNRLLLTGTPLQNKLPELWALLNFLLPSIFKACNTFEQWFNAPFAITGEKVELNEEETILIIRRLHKVLRPFLLRRLKKDVESQLPDKVEYIVKCEMSGLQRTLYNHMQEKGVMKTD---KINKGKKGAKALMNTIMQLRKLCNHPFMYQPIEEAYAKHIGMPTDIVTGPDVYRSSGKFELIDRILPKLKATGHRVLMFCQMTQCMTIIEDYFNYRGFKFLRLDGMTKSEDRADMLKIFNEKASDYFIFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARFKLNMDEKVIQAGRFNNRSTGSERRELLQSILRADEEEEEENEVPDDEVINQMIARSEDEFEKFTQMDLDRRREEAALGPNRKDRLIQIKELPEFLLAEDDDDDE--EEEEEIVYGRGSRAKKETNYNDQLSDKEWLKVIGAEDEEFDDDDEDDEEIKKPGKRVKRKKREDEEVEDEFANQNRKKKKSSAKRLQKKMATLMQIVVQYKDQDERVLSEPFMKLPSKKELPDYYEVIKRPVDIARIMNKIADGKYEDVDAMEKDFVLMCANTQKYNEDGSLIYEDSIVLQSVFTNARERLDADPDAGDDKDDKDDMSLGTPGKTTPLPSGETSLQGLPTGDQDESPGSSKGSSASKKRRKAADAIGAGRGKGGKKRSSKYVQSDDEDDD 1435 GPP GAP PMP P SPM PP P SP P M GP N PP + +L LQ +I+ MEE+G+Q DPRY+Q R H NM PP P G G G PP K F Q+ QLR QIMAYR LARNQPL Q+A+AV GKR + Q PP P P PGG P +ASP P P G +P P PG AP K NRVT + +P G+DPI +LQERENR+AAR+ HR++ELSNLP +M +D R KA+IELRALR+LNFQRQLRAEV+ACTRRDTTLETA+NVKAYKRTKRQGLREARATEKLEKQQ+LE ER++RQKHQEYL+ +L H +D + FHRNN+ K+ +LNKAV+N+HAN EREQKKEQERIEKER+RRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYI LT+MVKQHK+EQ +KQ++ ++ + + G DESSQMSD+ V V E +TG+ + G++APLAS+L SWLE +PG+E + R + G+++ ++ S E ++ KAK E+ ++ + YY+IAHT+ E +TEQA +++ GKLKEYQ+KGLEWLVSLYNN LNGILADEMGLGKTIQTI LITYLME+KK GPYLIIVPLSTLSNW LEFEKWAP+ VV+YKGSPA RRT Q+ MR +KFNVL+TTYEYVIKDKA+L+K+ WKYMIIDEGHRMKNHHCKLTQ+LNT Y + +RLLLTGTPLQNKLPELWALLNFLLPSIFK+C+TFEQWFNAPFA TGEKVELNEEETILIIRRLHKVLRPFLLRRLKK+VESQLP+K+EYIVKC+MSGLQR LY HMQ KGV+ TD K +GK GAKALMNTI+QLRKLCNHPFM+ IEE Y H+G ++VTGPD++R SGKFE +DRILPKLKAT HRVL+FCQMTQ MTI+EDY ++RGF +LRLDG TKSEDR D+LK FN S+YFIFLLSTRAGGLGLNLQ ADTV+IFDSDWNPHQDLQAQDRAHRIGQ+NEVRVLRLMTVNSVEERILAAAR+KLNMDEKVIQAG F+ +STG+ER++ LQ+IL D+ ++EENEVPDDE++N+MIAR+EDEF F ++DL+RRREEA LGPNRK RL++ ELP++L+ DD+ ++ EE E+ GRG+R +KE +Y D L++KEWLK I ++ DD+++EE+K + +R++ ED+ E++ + R+K S +L+++M LM IVV+Y D D RVLSEPFMKLPS+ + PDYYE+IK+P+DI RI+ K+ + KY D+D +EKDF+ +C N Q YNE+ SLIYEDSIVL+SVF+NAR++++ D D+ DD+ GDQ++ ++ +S+ K + K G G GGK+R KY+ S+DED+D Sbjct: 30 GPPQGAPSPMP----PSNQQAASPMGPPHHPHSPTGYQGGMPH-MNGP-NGVPPGMQQATQTFQPHQQLPPHQQPPMQTAPGGPASGGGQENLSALQRAIDSMEEKGLQEDPRYSQLLALRARHANM----EPPVRPPSQLVGGGFSGEGGAPPPA-KHSFSANQLQQLRVQIMAYRLLARNQPLSQQLALAVQGKRLDSPGESNYQHPPSEGAGGVGGEGSGDGGSSNGLMTQPMRAPCPPGGQPPTASPMTGQMAPPTGPAPVRPPPPGVSPTPPRPPQQVPGAPGAPQPKQNRVTTMPRPHGLDPILILQERENRVAARIVHRMEELSNLPATMPEDLRIKAQIELRALRVLNFQRQLRAEVIACTRRDTTLETAVNVKAYKRTKRQGLREARATEKLEKQQKLETERKKRQKHQEYLSTILQHCKDFKEFHRNNVAKVGRLNKAVMNYHANAEREQKKEQERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYIANLTEMVKQHKMEQQRKQEQEEQQKRKRKKKKKNREGDPDDESSQMSDLHVSVIEAATGRQLTGEDAPLASQLGSWLEAHPGWEPLEDSEDEDDEEDSDEEGDDNSRSKGGFSMIGKDEADSKLSVEDEAREMIKKAKIEDDEYKNTTEEHTYYSIAHTVHEIVTEQASIMINGKLKEYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIGLITYLMEKKKVNGPYLIIVPLSTLSNWVLEFEKWAPSVFVVAYKGSPAMRRTLQSQMRSTKFNVLLTTYEYVIKDKAVLAKLHWKYMIIDEGHRMKNHHCKLTQVLNTHYLAPHRLLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKIEYIVKCDMSGLQRVLYRHMQSKGVLLTDGSEKGKQGKGGAKALMNTIVQLRKLCNHPFMFHHIEEKYCDHVGQ-NNVVTGPDLFRVSGKFEFLDRILPKLKATSHRVLLFCQMTQLMTIMEDYLSWRGFSYLRLDGTTKSEDRGDLLKKFNNPESEYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGTERQKFLQNILHQDDADDEENEVPDDEMVNRMIARTEDEFNLFQKIDLERRREEAKLGPNRKSRLVEEAELPDWLVKNDDEIEKWTYEETEVQMGRGNRQRKEVDYTDSLTEKEWLKAIDDNVDD--FDDDEEEEVKTKKRGKRRRRGEDD--EEDASTSKRRKYSPSENKLRRRMRNLMNIVVKYTDSDSRVLSEPFMKLPSRHKYPDYYELIKKPIDIKRILAKVEECKYADMDELEKDFMQLCKNAQTYNEEASLIYEDSIVLESVFSNARQKVEQDNDSDDDES---------------------------KGDQED---AASDTSSVKMKLKLKPGRTRGSGAGGKRRRRKYI-SEDEDED 1516
BLAST of homeotic gene vs. nr
Match: gi|939634487|ref|XP_014292008.1| (PREDICTED: ATP-dependent helicase brm isoform X2 [Halyomorpha halys]) HSP 1 Score: 1623.22 bits (4202), Expect = 0.000e+0 Identity = 888/1519 (58.46%), Postives = 1087/1519 (71.56%), Query Frame = 0 Query: 6 GPPAGAPGPMPVRGGPPGSGPHSPMPPPESP-SPGMRPSPSPSPMTGPPNSYPP----------------------TQGPPS---------DLQKLQNSINQMEERGMQNDPRYNQARQLHQNMMSRQGPPPGAPGAPPGAGPPGGPAGPPGQDKGQFQNPQMLQLRAQIMAYRFLARNQPLPPQIAMAVSGKRPEG------QGPPGAPPYGPSRPGGPPGSASPGGPPNMQ------------APAPGGRGP-------------------TPNTTGPTGGTPGVAPTGKPNRVTPVAKPAGIDPITLLQERENRLAARVAHRIDELSNLPVSMADDTRTKAEIELRALRLLNFQRQLRAEVVACTRRDTTLETAINVKAYKRTKRQGLREARATEKLEKQQRLEAERRRRQKHQEYLNAVLTHGRDLQNFHRNNLGKIQKLNKAVLNWHANHEREQKKEQERIEKERLRRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYINQLTDMVKQHKVEQVQKQKELRKKAKLEE-----QAGAMLDESSQMSDVRVHVKELSTGKIIRGDNAPLASELESWLEKNPGFEQVPRDEDSDDS---------DGEEKPETTSSAEAILAKAK-EEATKEDEGDGVDYYTIAHTISEEITEQAPMLVGGKLKEYQVKGLEWLVSLYNNCLNGILADEMGLGKTIQTIALITYLMERKKNMGPYLIIVPLSTLSNWALEFEKWAPACNVVSYKGSPAARRTAQNAMRGSKFNVLVTTYEYVIKDKAMLSKIRWKYMIIDEGHRMKNHHCKLTQILNTFYTSNNRLLLTGTPLQNKLPELWALLNFLLPSIFKACNTFEQWFNAPFAITGEKVELNEEETILIIRRLHKVLRPFLLRRLKKDVESQLPDKVEYIVKCEMSGLQRTLYNHMQEKGVMKTD---KINKGKKGAKALMNTIMQLRKLCNHPFMYQPIEEAYAKHIGMPTDIVTGPDVYRSSGKFELIDRILPKLKATGHRVLMFCQMTQCMTIIEDYFNYRGFKFLRLDGMTKSEDRADMLKIFNEKASDYFIFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARFKLNMDEKVIQAGRFNNRSTGSERRELLQSILRADEEEEEENEVPDDEVINQMIARSEDEFEKFTQMDLDRRREEAALGPNRKDRLIQIKELPEFLLAEDDDDDE--EEEEEIVYGRGSRAKKETNYNDQLSDKEWLKVIGAEDEEFDDDDEDDEEIKKPGKRVKRKKREDEEVEDEFANQNRKKKKSSAKRLQKKMATLMQIVVQYKDQDERVLSEPFMKLPSKKELPDYYEVIKRPVDIARIMNKIADGKYEDVDAMEKDFVLMCANTQKYNEDGSLIYEDSIVLQSVFTNARERLDADPDAGDDKDDKDDMSLGTPGKTTPLPSGETSLQGLPTGDQDESPGSSKGSSASKKRRKAADAIGAGRGKGGKKRSSKYVQSDDEDDD 1435 GPP GAP PMP P SPM PP P SP P M GP NS PP QG P +L LQ +I+ MEE+G+Q DPRY+Q L + + P P G G A PP K F Q+ QLR QIMAYR LARNQPL Q+A+AV GKR + Q PP GG S++ M+ +P G P P P+G PG AP K NRVT + +P G+DPI +LQERENR+AAR+ HR++ELSNLP +M +D R KA+IELRALR+LNFQRQLRAEV+ACTRRDTTLETA+NVKAYKRTKRQGLREARATEKLEKQQ+LE ER++RQKHQEYL+ +L H +D + FHRNN+ K+ +LNKAV+N+HAN EREQKKEQERIEKER+RRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYI LT+MVKQHK+EQ +KQ++ ++ + + + G DESSQMSD+ V V E +TG+ + G++APLAS+L +WLE +PG+E + ED DD + + K A ++ KAK E+ ++ + YY+IAHT+ E +TEQA +++ GKLKEYQ+KGLEWLVSLYNN LNGILADEMGLGKTIQTI LITYLME+KK GPYLIIVPLSTLSNW LEFEKWAP+ VV+YKGSPA RRT Q+ MR +KFNVL+TTYEYVIKDKA+L+K+ WKYMIIDEGHRMKNHHCKLTQ+LNT Y + +RLLLTGTPLQNKLPELWALLNFLLPSIFK+C+TFEQWFNAPFA TGEKVELNEEETILIIRRLHKVLRPFLLRRLKK+VESQLP+K+EYIVKC+MSGLQR LY HMQ KGV+ TD K +GK GAKALMNTI+QLRKLCNHPFM+ IEE Y H+G ++VTGPD++R SGKFE +DRILPKLKAT HRVL+FCQMTQ MTI+EDY ++RGF +LRLDG TKSEDR D+LK FN S+YFIFLLSTRAGGLGLNLQ ADTV+IFDSDWNPHQDLQAQDRAHRIGQ+NEVRVLRLMTVNSVEERILAAAR+KLNMDEKVIQAG F+ +STG+ER++ LQ+IL D+ ++EENEVPDDE++N+MIAR+EDEF F ++DL+RRREEA LGPNRK RL++ ELP++L+ DD+ ++ EE E+ GRG+R +KE +Y D L++KEW+K I ++FDD++E++ + KK GKR +R + ++E+ R+K S +L+++M LM IVV+Y D D RVLSEPFMKLPS+ + PDYYE+IK+P+DI RI+ K+ + KY D+D +EKDF+ +C N Q YNE+ SLIYEDSIVL+SVF+NAR++++ D D+ DD+ GDQ++ ++ +S+ K + K G G GGK+R KY+ S+DED+D Sbjct: 30 GPPQGAPSPMP----PSAQQAASPMGPPHHPHSPTGYQGGMPH-MNGP-NSGPPGMQQGTQTFQSHQQLPPHQQPPMQGAPGGSGSGGGQENLSALQRAIDSMEEKGLQEDPRYSQLLALRARHANMEPPVRPPPQVVGGGFTGEGGAPPPA--KHSFSANQLQQLRVQIMAYRLLARNQPLSQQLALAVQGKRLDSPGESNYQHPPSEGAGVGGEGGGDGASSNGMMTQPMRPPCPPGGQPPTASPMTGQMAPPTGPAPVRPPPPGVSPTPPRPPQQVPSG--PG-APQPKQNRVTTMPRPHGLDPILVLQERENRVAARIVHRMEELSNLPATMPEDLRIKAQIELRALRVLNFQRQLRAEVIACTRRDTTLETAVNVKAYKRTKRQGLREARATEKLEKQQKLETERKKRQKHQEYLSTILQHCKDFKEFHRNNVAKVGRLNKAVMNYHANAEREQKKEQERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYIANLTEMVKQHKMEQQRKQEQEEQQKRKRKKKKKAREGDPDDESSQMSDLHVSVIEAATGRQLTGEDAPLASQLGAWLEAHPGWEPLEDSEDEDDEEDSDEEGKDEADSKLSVEDEAREMIKKAKIEDDEYKNTTEEHTYYSIAHTVHEIVTEQASIMINGKLKEYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIGLITYLMEKKKVNGPYLIIVPLSTLSNWVLEFEKWAPSVFVVAYKGSPAMRRTLQSQMRSTKFNVLLTTYEYVIKDKAVLAKLHWKYMIIDEGHRMKNHHCKLTQVLNTHYLAPHRLLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKIEYIVKCDMSGLQRVLYRHMQSKGVLLTDGSEKGKQGKGGAKALMNTIVQLRKLCNHPFMFHHIEEKYCDHVGQ-NNVVTGPDLFRVSGKFEFLDRILPKLKATNHRVLLFCQMTQLMTIMEDYLSWRGFSYLRLDGTTKSEDRGDLLKKFNNPESEYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGTERQKFLQNILHQDDADDEENEVPDDEMVNRMIARTEDEFNLFQKIDLERRREEAKLGPNRKSRLVEEAELPDWLVKNDDEIEKWAYEETEVQMGRGNRQRKEVDYTDSLTEKEWMKAIDDNVDDFDDEEEEEVKTKKRGKRRRRGEEDEEDA----GTSKRRKYSPSENKLRRRMRNLMNIVVKYTDSDSRVLSEPFMKLPSRHKYPDYYELIKKPIDIKRILAKVDECKYGDMDELEKDFMQLCKNAQTYNEEASLIYEDSIVLESVFSNARQKVEQDADSDDDES---------------------------KGDQED---AASDTSSVKMKLKLKPGRTRGSGAGGKRRRRKYI-SEDEDED 1501
BLAST of homeotic gene vs. nr
Match: gi|939634481|ref|XP_014291998.1| (PREDICTED: ATP-dependent helicase brm isoform X1 [Halyomorpha halys] >gi|939634484|ref|XP_014292003.1| PREDICTED: ATP-dependent helicase brm isoform X1 [Halyomorpha halys]) HSP 1 Score: 1622.06 bits (4199), Expect = 0.000e+0 Identity = 888/1525 (58.23%), Postives = 1087/1525 (71.28%), Query Frame = 0 Query: 6 GPPAGAPGPMPVRGGPPGSGPHSPMPPPESP-SPGMRPSPSPSPMTGPPNSYPP----------------------TQGPPS---------DLQKLQNSINQMEERGMQNDPRYNQARQLHQNMMSRQGPPPGAPGAPPGAGPPGGPAGPPGQDKGQFQNPQMLQLRAQIMAYRFLARNQPLPPQIAMAVSGKRPEG------QGPPGAPPYGPSRPGGPPGSASPGGPPNMQ------------APAPGGRGP-------------------TPNTTGPTGGTPGVAPTGKPNRVTPVAKPAGIDPITLLQERENRLAARVAHRIDELSNLPVSMADDTRTKAEIELRALRLLNFQRQLRAEVVACTRRDTTLETAINVKAYKRTKRQGLREARATEKLEKQQRLEAERRRRQKHQEYLNAVLTHGRDLQNFHRNNLGKIQKLNKAVLNWHANHEREQKKEQERIEKERLRRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYINQLTDMVKQHKVEQVQKQKELRKKAKLEE-----QAGAMLDESSQMSDVRVHVKELSTGKIIRGDNAPLASELESWLEKNPGFEQVPRDEDSDDS---------------DGEEKPETTSSAEAILAKAK-EEATKEDEGDGVDYYTIAHTISEEITEQAPMLVGGKLKEYQVKGLEWLVSLYNNCLNGILADEMGLGKTIQTIALITYLMERKKNMGPYLIIVPLSTLSNWALEFEKWAPACNVVSYKGSPAARRTAQNAMRGSKFNVLVTTYEYVIKDKAMLSKIRWKYMIIDEGHRMKNHHCKLTQILNTFYTSNNRLLLTGTPLQNKLPELWALLNFLLPSIFKACNTFEQWFNAPFAITGEKVELNEEETILIIRRLHKVLRPFLLRRLKKDVESQLPDKVEYIVKCEMSGLQRTLYNHMQEKGVMKTD---KINKGKKGAKALMNTIMQLRKLCNHPFMYQPIEEAYAKHIGMPTDIVTGPDVYRSSGKFELIDRILPKLKATGHRVLMFCQMTQCMTIIEDYFNYRGFKFLRLDGMTKSEDRADMLKIFNEKASDYFIFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARFKLNMDEKVIQAGRFNNRSTGSERRELLQSILRADEEEEEENEVPDDEVINQMIARSEDEFEKFTQMDLDRRREEAALGPNRKDRLIQIKELPEFLLAEDDDDDE--EEEEEIVYGRGSRAKKETNYNDQLSDKEWLKVIGAEDEEFDDDDEDDEEIKKPGKRVKRKKREDEEVEDEFANQNRKKKKSSAKRLQKKMATLMQIVVQYKDQDERVLSEPFMKLPSKKELPDYYEVIKRPVDIARIMNKIADGKYEDVDAMEKDFVLMCANTQKYNEDGSLIYEDSIVLQSVFTNARERLDADPDAGDDKDDKDDMSLGTPGKTTPLPSGETSLQGLPTGDQDESPGSSKGSSASKKRRKAADAIGAGRGKGGKKRSSKYVQSDDEDDD 1435 GPP GAP PMP P SPM PP P SP P M GP NS PP QG P +L LQ +I+ MEE+G+Q DPRY+Q L + + P P G G A PP K F Q+ QLR QIMAYR LARNQPL Q+A+AV GKR + Q PP GG S++ M+ +P G P P P+G PG AP K NRVT + +P G+DPI +LQERENR+AAR+ HR++ELSNLP +M +D R KA+IELRALR+LNFQRQLRAEV+ACTRRDTTLETA+NVKAYKRTKRQGLREARATEKLEKQQ+LE ER++RQKHQEYL+ +L H +D + FHRNN+ K+ +LNKAV+N+HAN EREQKKEQERIEKER+RRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYI LT+MVKQHK+EQ +KQ++ ++ + + + G DESSQMSD+ V V E +TG+ + G++APLAS+L +WLE +PG+E + ED DD + + K A ++ KAK E+ ++ + YY+IAHT+ E +TEQA +++ GKLKEYQ+KGLEWLVSLYNN LNGILADEMGLGKTIQTI LITYLME+KK GPYLIIVPLSTLSNW LEFEKWAP+ VV+YKGSPA RRT Q+ MR +KFNVL+TTYEYVIKDKA+L+K+ WKYMIIDEGHRMKNHHCKLTQ+LNT Y + +RLLLTGTPLQNKLPELWALLNFLLPSIFK+C+TFEQWFNAPFA TGEKVELNEEETILIIRRLHKVLRPFLLRRLKK+VESQLP+K+EYIVKC+MSGLQR LY HMQ KGV+ TD K +GK GAKALMNTI+QLRKLCNHPFM+ IEE Y H+G ++VTGPD++R SGKFE +DRILPKLKAT HRVL+FCQMTQ MTI+EDY ++RGF +LRLDG TKSEDR D+LK FN S+YFIFLLSTRAGGLGLNLQ ADTV+IFDSDWNPHQDLQAQDRAHRIGQ+NEVRVLRLMTVNSVEERILAAAR+KLNMDEKVIQAG F+ +STG+ER++ LQ+IL D+ ++EENEVPDDE++N+MIAR+EDEF F ++DL+RRREEA LGPNRK RL++ ELP++L+ DD+ ++ EE E+ GRG+R +KE +Y D L++KEW+K I ++FDD++E++ + KK GKR +R + ++E+ R+K S +L+++M LM IVV+Y D D RVLSEPFMKLPS+ + PDYYE+IK+P+DI RI+ K+ + KY D+D +EKDF+ +C N Q YNE+ SLIYEDSIVL+SVF+NAR++++ D D+ DD+ GDQ++ ++ +S+ K + K G G GGK+R KY+ S+DED+D Sbjct: 30 GPPQGAPSPMP----PSAQQAASPMGPPHHPHSPTGYQGGMPH-MNGP-NSGPPGMQQGTQTFQSHQQLPPHQQPPMQGAPGGSGSGGGQENLSALQRAIDSMEEKGLQEDPRYSQLLALRARHANMEPPVRPPPQVVGGGFTGEGGAPPPA--KHSFSANQLQQLRVQIMAYRLLARNQPLSQQLALAVQGKRLDSPGESNYQHPPSEGAGVGGEGGGDGASSNGMMTQPMRPPCPPGGQPPTASPMTGQMAPPTGPAPVRPPPPGVSPTPPRPPQQVPSG--PG-APQPKQNRVTTMPRPHGLDPILVLQERENRVAARIVHRMEELSNLPATMPEDLRIKAQIELRALRVLNFQRQLRAEVIACTRRDTTLETAVNVKAYKRTKRQGLREARATEKLEKQQKLETERKKRQKHQEYLSTILQHCKDFKEFHRNNVAKVGRLNKAVMNYHANAEREQKKEQERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYIANLTEMVKQHKMEQQRKQEQEEQQKRKRKKKKKAREGDPDDESSQMSDLHVSVIEAATGRQLTGEDAPLASQLGAWLEAHPGWEPLEDSEDEDDEEDSDEEGGFSMIGKDEADSKLSVEDEAREMIKKAKIEDDEYKNTTEEHTYYSIAHTVHEIVTEQASIMINGKLKEYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIGLITYLMEKKKVNGPYLIIVPLSTLSNWVLEFEKWAPSVFVVAYKGSPAMRRTLQSQMRSTKFNVLLTTYEYVIKDKAVLAKLHWKYMIIDEGHRMKNHHCKLTQVLNTHYLAPHRLLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKIEYIVKCDMSGLQRVLYRHMQSKGVLLTDGSEKGKQGKGGAKALMNTIVQLRKLCNHPFMFHHIEEKYCDHVGQ-NNVVTGPDLFRVSGKFEFLDRILPKLKATNHRVLLFCQMTQLMTIMEDYLSWRGFSYLRLDGTTKSEDRGDLLKKFNNPESEYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGTERQKFLQNILHQDDADDEENEVPDDEMVNRMIARTEDEFNLFQKIDLERRREEAKLGPNRKSRLVEEAELPDWLVKNDDEIEKWAYEETEVQMGRGNRQRKEVDYTDSLTEKEWMKAIDDNVDDFDDEEEEEVKTKKRGKRRRRGEEDEEDA----GTSKRRKYSPSENKLRRRMRNLMNIVVKYTDSDSRVLSEPFMKLPSRHKYPDYYELIKKPIDIKRILAKVDECKYGDMDELEKDFMQLCKNAQTYNEEASLIYEDSIVLESVFSNARQKVEQDADSDDDES---------------------------KGDQED---AASDTSSVKMKLKLKPGRTRGSGAGGKRRRRKYI-SEDEDED 1507
BLAST of homeotic gene vs. nr
Match: gi|242023503|ref|XP_002432172.1| (Homeotic gene regulator, putative [Pediculus humanus corporis] >gi|212517560|gb|EEB19434.1| Homeotic gene regulator, putative [Pediculus humanus corporis]) HSP 1 Score: 1611.66 bits (4172), Expect = 0.000e+0 Identity = 859/1384 (62.07%), Postives = 1027/1384 (74.21%), Query Frame = 0 Query: 60 QGPPSDLQKLQNSINQMEERGMQNDPRYNQARQLHQNMMSRQGPPPGAPGAPPGAGPPGGPAGPPGQDKGQFQNPQMLQLRAQIMAYRFLARNQPLPPQIAMAVSGKRPEGQGP--PGAPPY---------GPSRPGGPPGSASPGG---------------------------------------------PPNMQAPAPGGRGPTPNTTGPTGGT------PGVAPTGKPNRVTPVAKPAGIDPITLLQERENRLAARVAHRIDELSNLPVSMADDTRTKAEIELRALRLLNFQRQLRAEVVACTRRDTTLETAINVKAYKRTKRQGLREARATEKLEKQQRLEAERRRRQKHQEYLNAVLTHGRDLQNFHRNNLGKIQKLNKAVLNWHANHEREQKKEQERIEKERLRRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYINQLTDMVKQHKVEQVQKQKE------LRKKAKLEEQAGAMLDESSQMSDVRVHVKELSTGKIIRGDNAPLASELESWLEKNPGFEQVPRDEDS-------------DDSDGEEKPETTSSAEAILAKAKEEATKEDEGDGVDYYTIAHTISEEITEQAPMLVGGKLKEYQVKGLEWLVSLYNNCLNGILADEMGLGKTIQTIALITYLMERKKNMGPYLIIVPLSTLSNWALEFEKWAPACNVVSYKGSPAARRTAQNAMRGSKFNVLVTTYEYVIKDKAMLSKIRWKYMIIDEGHRMKNHHCKLTQILNTFYTSNNRLLLTGTPLQNKLPELWALLNFLLPSIFKACNTFEQWFNAPFAITGEKVELNEEETILIIRRLHKVLRPFLLRRLKKDVESQLPDKVEYIVKCEMSGLQRTLYNHMQEKGVMKTD---KINKGKKGAKALMNTIMQLRKLCNHPFMYQPIEEAYAKHIGMPTDIVTGPDVYRSSGKFELIDRILPKLKATGHRVLMFCQMTQCMTIIEDYFNYRGFKFLRLDGMTKSEDRADMLKIFNEKASDYFIFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARFKLNMDEKVIQAGRFNNRSTGSERRELLQSIL-RADEEEEEENEVPDDEVINQMIARSEDEFEKFTQMDLDRRREEAALGPNRKDRLIQIKELPEFLLAEDDDDD---EEEEEEIVYGRGSRAKKETNYNDQLSDKEWLKVIGAEDEEFDDDDEDDEEIKKPGKRVKRKKREDEEVEDEFANQNRKKKKSSA---KRLQKKMATLMQIVVQYKDQDERVLSEPFMKLPSKKELPDYYEVIKRPVDIARIMNKIADGKYEDVDAMEKDFVLMCANTQKYNEDGSLIYEDSIVLQSVFTNARERLDADPDA 1352 Q +L LQ +I+ MEE+G+Q DPRY+Q L ++QG + G G GQ K QMLQLR QIMAYR LARNQPL Q+A+AV GK P G P PG PP RP G P S P + G P TT GT PG P K NRVT + KP G+DP+T+LQERENR AAR+A RID L+NLP SMA+D + +AEIELR+LRLLNFQRQL++E++ACTRRDTTLETA+NVKAYKRTKRQGLREARATEKLEKQQ+LEAER+RRQKHQEYL AVL H +D + HRNNL K+ +LNKAVLN+HAN E+EQKKEQERIEKER+RRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYI+ LT+MVKQHK EQ +KQ E +++ K+E + G +DESSQ +D+ V V E +TGK + GD APLASE+ESWL+ +PG+E + D + + K A+A++ KAK E E + D YY+IAHTI+E + EQA ++V GKLKEYQ+KGLEWLVSL+NN LNGILADEMGLGKTIQTI L+TYLME+K+ MGP+LIIVPLSTLSNW LEFEKWAP+ VV+YKGSP RR+ QN MR +KFNVL+TTYEYVIKDK +L+K+ W++MIIDEGHRMKNHHCKLTQ+LNT Y + +RLLLTGTPLQNKLPELWALLNFLLPSIFK+ +TFEQWFNAPFA TGEKVELNEEETILIIRRLHKVLRPFLLRRLKK+VESQLPDKVEYI+KC+MSGLQR LY HMQ KGV+ TD K NKGK GAKALMNTI+QLRKLCNHPFM+Q IEE Y H+G +++GPD+YR+SGKFEL+DRILPKLKAT HRVL+FCQMTQ MTI+EDY +R F +LRLDG TKSEDR ++L+ FN K S+YF+FLLSTRAGGLGLNLQ ADTV+IFDSDWNPHQDLQAQDRAHRIGQ+NEVRVLRLMTVNSVEERILAAAR+KLNMDEKVIQAG F+ +STGSER++ LQ+IL + D ++EEENEVPDDE +NQMIAR+E EF+ F +MDL+RRRE+A LG RK RLI+ ELP++L+ EDD+ D EEEEE + RGSR +KE +Y D L++KEWLK I E DD+DE++EE K KR KRK+R +++ +D + + KK+K+ + +++K+M +LM IVV+Y D D R+LSEPFMKLPSK +LPDYY++IK+P+DI +I N+I DGKY D D +EKDF MC N Q YNE+ SLI+EDSIVLQSVFTNAR+RL+ D + Sbjct: 69 QSGQENLNALQRTIDLMEEKGLQEDPRYSQLLVLR----AKQGNMDPSRMGFGGNSSSGINQPCEGQTKNHLTPSQMLQLRGQIMAYRMLARNQPLSQQVALAVQGKVPAGNQPNAPGFPPSQQPMEAPQSASVRPTGQPDSGGRSDISSPPPSTGPPGQSHPQPSRPPPTSTPPSSSSSSNKPPVTQNSIPPASFNGIVSPQHGSLPPTTSVRPGTTTAVPQPGQTP-AKQNRVTAIPKPTGLDPLTILQERENRKAARIAMRIDVLNNLPTSMAEDLKLRAEIELRSLRLLNFQRQLKSEIIACTRRDTTLETAVNVKAYKRTKRQGLREARATEKLEKQQKLEAERKRRQKHQEYLAAVLQHSKDFKEHHRNNLAKVARLNKAVLNYHANAEKEQKKEQERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYISNLTEMVKQHKAEQKRKQHEEQKKKKKKRRKKVEGEDGMDVDESSQNTDLHVTVVETATGKTLSGDEAPLASEVESWLDSHPGWELMEEDTEDDDDENDDEDEEDTSKQNSSSKQNDDVDAKAVINKAKVE-DDEYKTDEQTYYSIAHTINEVVVEQASIMVNGKLKEYQIKGLEWLVSLFNNNLNGILADEMGLGKTIQTIGLLTYLMEKKRVMGPFLIIVPLSTLSNWVLEFEKWAPSVVVVAYKGSPHLRRSIQNQMRSTKFNVLLTTYEYVIKDKGVLAKLHWRFMIIDEGHRMKNHHCKLTQVLNTHYIAPHRLLLTGTPLQNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQRVLYRHMQSKGVLLTDGSEKGNKGKGGAKALMNTIVQLRKLCNHPFMFQQIEEKYCDHVGAAAGVISGPDLYRASGKFELLDRILPKLKATNHRVLLFCQMTQLMTIMEDYLTWRNFNYLRLDGTTKSEDRGELLRKFNSKDSEYFLFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERQQFLQTILHQDDADDEEENEVPDDETVNQMIARNEVEFDLFQKMDLERRREDAKLGTARKSRLIEESELPDWLVKEDDEVDVLAYEEEEEKILERGSRKRKEVDYTDSLTEKEWLKAIDEEGAFDDDEDEEEEEKKSKKKRGKRKRRGEDDDDDVIPSSSSKKRKNLSHIDSKMKKQMKSLMNIVVKYADSDGRILSEPFMKLPSKNKLPDYYDIIKKPLDIKKIFNRIEDGKYSDFDDLEKDFTQMCKNAQIYNEEASLIHEDSIVLQSVFTNARQRLEQDAET 1446
BLAST of homeotic gene vs. nr
Match: gi|242006444|ref|XP_002424060.1| (conserved hypothetical protein [Pediculus humanus corporis] >gi|212507366|gb|EEB11322.1| conserved hypothetical protein [Pediculus humanus corporis]) HSP 1 Score: 1602.42 bits (4148), Expect = 0.000e+0 Identity = 858/1396 (61.46%), Postives = 1035/1396 (74.14%), Query Frame = 0 Query: 10 GAPGPMPVRGGPPGSGPHSPMPPPESPSPGMRPSPSPSPMTGPPNSYPPTQGPPSDLQKLQNSINQMEERGMQNDPRYNQARQLHQNMMSRQGPPPGAPGAPPGAGPPGGPAG---PPGQD--KGQFQNPQMLQLRAQIMAYRFLARNQPLPPQIAMAVSGKRP-----EGQGPPGAPPYGPSRPGGPPGSASPGGPPNMQ-APAPGGRGPTPNTTGPTGGTPGVAPT-----GKPNRVTPVAKPAGIDPITLLQERENRLAARVAHRIDELSNLPVSMADDTRTKAEIELRALRLLNFQRQLRAEVVACTRRDTTLETAINVKAYKRTKRQGLREARATEKLEKQQRLEAERRRRQKHQEYLNAVLTHGRDLQNFHRNNLGKIQKLNKAVLNWHANHEREQKKEQERIEKERLRRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYINQLTDMVKQHKVEQVQKQKE----LRKKAKLEEQAGAMLDESSQMSDVRVHVKELSTGKIIRGDNAPLASELESWLEKNPGFEQVPRDEDS----DDSDGEEK----PETTSS-------AEAILAKAKEEATKEDEGDGVDYYTIAHTISEEITEQAPMLVGGKLKEYQVKGLEWLVSLYNNCLNGILADEMGLGKTIQTIALITYLMERKKNMGPYLIIVPLSTLSNWALEFEKWAPACNVVSYKGSPAARRTAQNAMRGSKFNVLVTTYEYVIKDKAMLSKIRWKYMIIDEGHRMKNHHCKLTQILNTFYTSNNRLLLTGTPLQNKLPELWALLNFLLPSIFKACNTFEQWFNAPFAITGEKVELNEEETILIIRRLHKVLRPFLLRRLKKDVESQLPDKVEYIVKCEMSGLQRTLYNHMQEKGVMKTD---KINKGKKGAKALMNTIMQLRKLCNHPFMYQPIEEAYAKHIGMPTDIVTGPDVYRSSGKFELIDRILPKLKATGHRVLMFCQMTQCMTIIEDYFNYRGFKFLRLDGMTKSEDRADMLKIFNEKASDYFIFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARFKLNMDEKVIQAGRFNNRSTGSERRELLQSIL-RADEEEEEENEVPDDEVINQMIARSEDEFEKFTQMDLDRRREEAALGPNRKDRLIQIKELPEFLLAEDDDDD---EEEEEEIVYGRGSRAKKETNYNDQLSDKEWLKVIGAEDEEFDDDDEDDEEIKKPGKRVKRKKREDEEVEDEFANQNRKKKKSSAK----RLQKKMATLMQIVVQYKDQDERVLSEPFMKLPSKKELPDYYEVIKRPVDIARIMNKIADGKYEDVDAMEKDFVLMCANTQKYNEDGSLIYEDSIVLQSVFTNARERLDADPDAGDDKDDK 1359 G+PGPM + PP S PP + P+P + S P QG S L GA P A PG P PP Q K Q Q++QLR QIMAYR LARNQPL QIA+AV GK P GP + P P G P GP ++ AP+ P G T P + GKP +VT + KP GIDP+ +LQERENR+AAR+A RI+ LSNLP +MA+D R +AEIELR LRLLNFQRQL++EV+A TRRD+TLETA+NVKAYKRTKRQGLREARATEKLEKQQ+ EAER+RRQKHQEYL AVL H +D + +HRNNL K +LNKAVL++HAN E+EQKKEQERIEKER+RRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYI+ LT+MVKQHK +Q +KQ+E +K K + G +DESSQ SD+ V V E STGK + GD APLASE++SWLE +PG+E + D+DS DD++ E+K P+ +S A++++ KAK E E + D YY+IAHTI+E + EQA ++V GKLKEYQ+KGLEWLVSL+NN LNGILADEMGLGKTIQTI LITYLME+KK MGP+LIIVPLSTLSNW LEFEKWAP+ VV+YKGSP RR+ QN MR KFNVL+TTYEY+IKDK +L+K+ W++MIIDEGHRMKNHHCKLTQ+LNT Y + +RLLLTGTPLQNKLPELWALLNFLLPSIFK+ +TFEQWFNAPFA TGEKVELNEEETILIIRRLHKVLRPFLLRRLKK+VESQLPDKVEYI+KC+MSGLQR LY HMQ KGV+ TD K KGK GAKALMNTI+QLRKLCNHPF++Q IEE Y H+G + +V+GPD+YR+SGKFEL+DRILPKLKAT HRVL+FCQMTQ MTI+EDY +R F +LRLDG TKSEDR ++L+ FN K S+YF+FLLSTRAGGLGLNLQ ADTV+IFDSDWNPHQDLQAQDRAHRIGQ+NEVRVLRL+TVNSVEERILAAAR+KLNMDEKVIQAG F+ +STGSER++ LQSIL + D ++EEENEVPDDE +NQMIAR+E EF+ F +MDL+RRRE+A LG RK RLI+ ELPE+L+ ED++ D E+EEE RG+R +KE +Y D L++KEWLK I E DD+++++EE K K+ KRK+R +++ +D + ++KKK +S + +L+K M L+ IVV+Y D D RVLSEPFMKLPSK +LPDYY++IK+P+DI +I +I +GKY D D +E+DF MC N Q YNE+ SLI+EDSIVLQSVFTNAR+R++ + D+ D+K K Sbjct: 89 GSPGPMSIGQNPPISD----CPPHQHPAPTV--------------SQPSVQGNSSGNTTL-----------------------------------AGALSGPTNAPQPGIPVHQNVPPQQAMVKCQLTPNQLMQLRGQIMAYRMLARNQPLSQQIALAVQGKTPLSSQQSSSGPGFPINHQPILPSGSVPGVRPLGPQDITLAPSNAALAPNVVRLGATPPPPPIQQPPQPPPGKPTKVTTMPKPVGIDPLLILQERENRMAARIAMRIEVLSNLPTTMAEDVRIRAEIELRTLRLLNFQRQLKSEVIAYTRRDSTLETALNVKAYKRTKRQGLREARATEKLEKQQKFEAERKRRQKHQEYLAAVLQHSKDFKEYHRNNLAKTARLNKAVLSYHANAEKEQKKEQERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYISNLTEMVKQHKADQKRKQQEEIQKKPRKKKRRDGEGMDVDESSQNSDLHVSVVETSTGKTLTGDEAPLASEVDSWLESHPGWEIL--DDDSEGEYDDNEDEDKDAAEPKQNTSKQNDDPDAKSVIKKAKVE-DDEYKTDEQTYYSIAHTINEVVVEQASIMVNGKLKEYQIKGLEWLVSLFNNNLNGILADEMGLGKTIQTIGLITYLMEKKKVMGPFLIIVPLSTLSNWVLEFEKWAPSVVVVAYKGSPHLRRSIQNQMRSKKFNVLLTTYEYIIKDKGVLAKLHWRFMIIDEGHRMKNHHCKLTQVLNTHYIAPHRLLLTGTPLQNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQRVLYRHMQSKGVLLTDGSEKGAKGKGGAKALMNTIVQLRKLCNHPFLFQQIEEKYCDHVGAASGVVSGPDLYRASGKFELLDRILPKLKATNHRVLLFCQMTQLMTIMEDYLTWRNFSYLRLDGATKSEDRGELLRRFNSKDSEYFLFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLLTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERQQFLQSILHQDDADDEEENEVPDDETVNQMIARNETEFDLFQKMDLERRREDAKLGTARKSRLIEESELPEWLVKEDEEVDVLAYEDEEEKFLERGTRKRKEVDYTDSLTEKEWLKAIDEEGAFDDDEEDEEEEKKSRRKKGKRKRRGEDDDDDAIPSTSKKKKTNSNQNAESKLKKHMKNLLNIVVKYTDSDGRVLSEPFMKLPSKNKLPDYYDIIKKPLDIKKIFARIDEGKYSDFDDLERDFTQMCKNAQIYNEEASLIHEDSIVLQSVFTNARQRMEQNGDSEDEKSVK 1428
BLAST of homeotic gene vs. nr
Match: gi|1330879460|gb|PNF17191.1| (ATP-dependent helicase brm [Cryptotermes secundus] >gi|1330879461|gb|PNF17192.1| ATP-dependent helicase brm [Cryptotermes secundus]) HSP 1 Score: 1601.65 bits (4146), Expect = 0.000e+0 Identity = 860/1423 (60.44%), Postives = 1030/1423 (72.38%), Query Frame = 0 Query: 39 GMRPSPSPSPMTGPPNSYPPTQGPPSDLQKLQNSINQMEERGMQNDPRYNQARQLHQNMMSRQGPPPGAPGAPPGAGPPGGPAGP----PGQDKGQFQNPQMLQLRAQIMAYRFLARNQPLPPQIAMAVSGKRPEG--------QGPPGA-------PPYGPSRPGGPPGSASPGGPPNMQAPAPG----GRGPTPNTT---------------------------GPTGGTPGVA---PTGKPNRVTPVAKPAGIDPITLLQERENRLAARVAHRIDELSNLPVSMADDTRTKAEIELRALRLLNFQRQLRAEVVACTRRDTTLETAINVKAYKRTKRQGLREARATEKLEKQQRLEAERRRRQKHQEYLNAVLTHGRDLQNFHRNNLGKIQKLNKAVLNWHANHEREQKKEQERIEKERLRRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYINQLTDMVKQHKVEQVQKQKELRKKAKLE-------EQAGAMLDESSQMSDVRVHVKELSTGKIIRGDNAPLASELESWLEKNPGFEQVPR--------------------------DEDSDDSDGEEKPETTSSAEAILAKAK-EEATKEDEGDGVDYYTIAHTISEEITEQAPMLVGGKLKEYQVKGLEWLVSLYNNCLNGILADEMGLGKTIQTIALITYLMERKKNMGPYLIIVPLSTLSNWALEFEKWAPACNVVSYKGSPAARRTAQNAMRGSKFNVLVTTYEYVIKDKAMLSKIRWKYMIIDEGHRMKNHHCKLTQILNTFYTSNNRLLLTGTPLQNKLPELWALLNFLLPSIFKACNTFEQWFNAPFAITGEKVELNEEETILIIRRLHKVLRPFLLRRLKKDVESQLPDKVEYIVKCEMSGLQRTLYNHMQEKGVMKTD---KINKGKKGAKALMNTIMQLRKLCNHPFMYQPIEEAYAKHIGMPTDIVTGPDVYRSSGKFELIDRILPKLKATGHRVLMFCQMTQCMTIIEDYFNYRGFKFLRLDGMTKSEDRADMLKIFNEKASDYFIFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARFKLNMDEKVIQAGRFNNRSTGSERRELLQSIL-RADEEEEEENEVPDDEVINQMIARSEDEFEKFTQMDLDRRREEAALGPNRKDRLIQIKELPEFLLAEDDDDDE---EEEEEIVYGRGSRAKKETNYNDQLSDKEWLKVI------------------GAEDEEFDDDDEDDEEIKKPGKRVKRKKREDEEVEDEFANQNRKKKKSSAKRLQKKMATLMQIVVQYKDQDERVLSEPFMKLPSKKELPDYYEVIKRPVDIARIMNKIADGKYEDVDAMEKDFVLMCANTQKYNEDGSLIYEDSIVLQSVFTNARERLDAD 1349 GM +P S + P P Q LQ +I MEE+GMQNDPRY+Q L +RQ P G P A P GP K F + Q+ QLR QIMAYR LARNQPL Q+A+AV GKR + QG PG P P GG P S SP P AP+ G G PT +T+ GP G A P K NRVTP+AKPAG+DP+ +LQERENRLAAR+AHRI+EL+NLP MA+D + KA+IELRALRLLNFQRQLR EVVACTR+DT LET+ ++K YKRTKRQGLREARATEKLEKQQ+LEAER+RRQKHQEYLNAVL HG+DL+ +HRNN+ KI +LN+AVLN HAN EREQKKEQERIEKER+RRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYI LT+MVKQHKVEQ +KQ+E +++ K + E + DESSQMSDVRV V E +TGKI+ GD APLAS+ ++WLE +PG+E PR ++SDD+ K A+ ++ KAK E+ ++ + YY+IAHTI+E++TEQA ++V GKLKEYQ++GLEWLVSLYNN LNGILADEMGLGKTIQTIALITYLME+K+ GPYLIIVPLSTLSNW LEFEKWAP+ +V+YKGSP RR Q+ MR +KFNVL+TTYEY+IKDKA+L+K+RWK+MIIDEGHRMKNHHCKLTQ+LNT Y + +RLLLTGTPLQNKLPELWALLNFLLPSIFK+ +TFEQWFNAPFA TGEKVELNEEETILIIRRLHKVLRPFLLRRLKK+VESQLPDKVEYI+KC+MSGLQR LY+HMQ KGV+ TD K +GK GAKALMNTIMQLRKLCNHPFM+Q IE+AY H+G+ +V GPD+YR+SGKFEL+DRILPKLKATGHRVL+FCQMTQ MTI+EDY +RGF +LRLDG TK+EDR ++L+ FN SDYF+FLLSTRAGGLGLNLQ+ADTV+IFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAAR+KLNMDEKVIQAG F+ +STGSER++ L++IL + + ++EEENEVPDDE +NQMIAR E EFE F +MD++RRRE++ LG +R+ RL++ +ELP +L+ ED++ ++ EEEEE YGRGSR +KE +Y D L++KEWLK I + D+DD E V+ +K +++K+M LM IV++Y D D R LS PFMKLPSK+ELPDYY +IKRP+DI +I ++ + KY D +E+DF+ MC N QKYNE+ SLI+EDSIVL++VF NAR RL+ D Sbjct: 93 GMLHNPQGSSVPQLPAQMVSQSSPHDTYQALQRAIGAMEEKGMQNDPRYSQLLALR----ARQVPY----GNPAQADPSRIIQGPGSFLDSTPKHIFSSLQLQQLRVQIMAYRLLARNQPLTSQMALAVQGKRIDSVPSHRMPQQGDPGVVSGVMQQPMRTPVPVGGQPPSQSP--IPGQPAPSAGQQTVGTAPTTSTSPNNGAGTGTSVVQPTSTTQGPRPLPPSGPAAGAQSAAQPPPQQKQNRVTPIAKPAGLDPLIILQERENRLAARIAHRIEELNNLPTVMAEDLKIKAQIELRALRLLNFQRQLRTEVVACTRKDTMLETSCHIKTYKRTKRQGLREARATEKLEKQQKLEAERKRRQKHQEYLNAVLQHGKDLKEYHRNNIAKILRLNRAVLNHHANAEREQKKEQERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYIGNLTEMVKQHKVEQRRKQREQKERKKKKKKRSEDGEIIDGLNDESSQMSDVRVTVMETATGKILCGDEAPLASQFQAWLEMHPGWEAAPREDDEDDDDDDESDVDTDDYDDDDRDLKKNSDDNSLNPKMSEEEKAKVVIQKAKVEDDEYKNYTEEQTYYSIAHTITEKVTEQASIMVNGKLKEYQIRGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEKKRVNGPYLIIVPLSTLSNWVLEFEKWAPSVIIVAYKGSPTMRRNIQSQMRATKFNVLLTTYEYIIKDKAVLAKLRWKFMIIDEGHRMKNHHCKLTQVLNTHYLAPHRLLLTGTPLQNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQRVLYSHMQSKGVLLTDGSEKGKQGKGGAKALMNTIMQLRKLCNHPFMFQHIEKAYCDHVGIHGSVVIGPDLYRASGKFELLDRILPKLKATGHRVLLFCQMTQLMTIMEDYLGWRGFHYLRLDGTTKAEDRGELLRKFNSPESDYFVFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERQKFLKTILHQDEADDEEENEVPDDETVNQMIARCETEFEMFQKMDIERRREDSKLGSDRRPRLMEEQELPTWLVKEDEEVEKWTGEEEEERYYGRGSRQRKEVDYTDSLTEKEWLKAIDDGIEEEEEEERKPARKKFRKRRRKDEDDAGSGNSSAVTVPPVVMVVEQPHVKKRRGRPPLEKGTLVNGKIKKQMRKLMNIVIKYADCDGRTLSGPFMKLPSKQELPDYYNIIKRPIDIKKIQQRLEENKYTSFDDLERDFIQMCRNAQKYNEEASLIHEDSIVLETVFANARIRLEQD 1505
BLAST of homeotic gene vs. nr
Match: gi|1070202139|ref|XP_018355411.1| (PREDICTED: ATP-dependent helicase brm isoform X2 [Trachymyrmex septentrionalis]) HSP 1 Score: 1601.65 bits (4146), Expect = 0.000e+0 Identity = 835/1327 (62.92%), Postives = 1025/1327 (77.24%), Query Frame = 0 Query: 65 DLQKLQNSINQMEERGMQNDPRYNQARQLHQNMMSRQGPPPGAPGAPPGAGPPGGPAGPPGQDKGQFQNPQMLQLRAQIMAYRFLARNQPLPPQIAMAVSGKRPEGQGPPGAP--PYGPSRPGGPPGSASPGGPPNMQAPAPGGRGPTPNTTGPTGGT-PGVAPT----------GKPNRVTPVAKPAGIDPITLLQERENRLAARVAHRIDELSNLPVSMADDTRTKAEIELRALRLLNFQRQLRAEVVACTRRDTTLETAINVKAYKRTKRQGLREARATEKLEKQQRLEAERRRRQKHQEYLNAVLTHGRDLQNFHRNNLGKIQKLNKAVLNWHANHEREQKKEQERIEKERLRRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYINQLTDMVKQHKVEQVQKQKELRKKAKLEE--QAGAMLDESSQMSDVRVHVKELSTGKIIRGDNAPLASELESWLEKNPGFEQVP----------------RDEDSDDSDGEEKPETTSSAEAILAKAKEEATKEDEGDGVDYYTIAHTISEEITEQAPMLVGGKLKEYQVKGLEWLVSLYNNCLNGILADEMGLGKTIQTIALITYLMERKKNMGPYLIIVPLSTLSNWALEFEKWAPACNVVSYKGSPAARRTAQNAMRGSKFNVLVTTYEYVIKDKAMLSKIRWKYMIIDEGHRMKNHHCKLTQILNTFYTSNNRLLLTGTPLQNKLPELWALLNFLLPSIFKACNTFEQWFNAPFAITGEKVELNEEETILIIRRLHKVLRPFLLRRLKKDVESQLPDKVEYIVKCEMSGLQRTLYNHMQEKGVMKTD---KINKGKKGAKALMNTIMQLRKLCNHPFMYQPIEEAYAKHIGM-PTDIVTGPDVYRSSGKFELIDRILPKLKATGHRVLMFCQMTQCMTIIEDYFNYRGFKFLRLDGMTKSEDRADMLKIFNEKASDYFIFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARFKLNMDEKVIQAGRFNNRSTGSERRELLQSIL-RADEEEEEENEVPDDEVINQMIARSEDEFEKFTQMDLDRRREEAALGPNRKDRLIQIKELPEFLLAEDDDDDE---EEEEEIVYGRGSRAKKETNYNDQLSDKEWLKVIGAEDEEFDDDDEDDEEIKKPGKRVKRKKREDEEVEDEFANQNRKKKKSSAK----RLQKKMATLMQIVVQYKD-QDERVLSEPFMKLPSKKELPDYYEVIKRPVDIARIMNKIADGKYEDVDAMEKDFVLMCANTQKYNEDGSLIYEDSIVLQSVFTNARERLD 1347 +L LQ +I+ MEE+G+Q DPRY+Q L +RQG G G DK F + Q+ QLRAQIMAYR LARNQ +P Q+A+A G P PPG P PS+ G +P GP + P PN GPTG PG K NRVT V KPAG+DP+ +LQERENR+AAR++ R+++LSNLP +M +D R +A+IELR LR+LNFQRQLR+E++ACTR+DTTLETA+NVKAYKRTKRQGLREARATEKLEKQQ+LEAER+RRQKHQE+L++VL HG+D + FHRNN+ K+ +LNKAVLN+HAN EREQKKEQERIEKER+RRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYI+ LT+MVKQHK+EQ +KQ E +K+ K ++ Q G ++ D R+ V E STG+ + GD APL S+L ++LE +PG+E + +D+ DS+ E+ +T A K +++ K +E YY+IAHT+ E +TEQA ++V GKLKEYQ+KGLEWLVSL+NN LNGILADEMGLGKTIQTIAL+TYLME+KK GP+LIIVPLSTLSNW LEFEKWAP+ VVSYKGSPA RRT Q+ MR +KFNVL+TTYEYVIKDK +L+K++WKYMIIDEGHRMKNHHCKLTQ+LNT Y + +RLLLTGTPLQNKLPELWALLNFLLPSIFK+C+TFEQWFNAPFA TGEKVELNEEETILIIRRLHKVLRPFLLRRLKK+VESQLPDKVEYI+KC+MSGLQ+ LY HMQ KGV+ TD K +GK GAKALMNTI+QLRKLCNHPFM+Q IEE Y +H+G + ++TGPD+YR+SGKFEL+DRILPKLKAT HRVL+FCQMTQ MTI+EDY ++RGF +LRLDG TK+EDR D+LK FN+ S+YF+FLLSTRAGGLGLNLQ ADTV+IFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAAR+KLNMDEKVIQAG F+ +STGSER++ LQSIL + D ++EEENEVPDDE +NQMIAR+E EFE F ++DL+RRREEA LGPNRK RL++ ELP++L+ +DD+ + EE+E+ GRGSR +KE +Y D L++KEWLK I + E+++++EDD++ KK KR K+ + +DE + KK++ + ++++ M L+ +VV Y D D R+LSEPFMKLPS++ELPDYYE+IK+P+ I +++ KI +GKY D+D +EKDF+ +C N Q YNE+ SLI+EDSIVLQSVFTNAR+RL+ Sbjct: 734 NLNALQKAIDSMEEKGLQEDPRYSQLLALR----ARQGS---------GMG-----------DKQAFNSQQLQQLRAQIMAYRLLARNQAVPQQVALAAQGGAPP---PPGMSQRPIDPSQ-----GPVTPSGP----------QIPGPNVIGPTGAPRPGCQTPQQQQQPPQSGAKANRVTSVGKPAGLDPLLILQERENRVAARISLRMEQLSNLPTNMPEDLRIQAQIELRMLRVLNFQRQLRSEIIACTRKDTTLETAVNVKAYKRTKRQGLREARATEKLEKQQKLEAERKRRQKHQEFLSSVLQHGKDFKEFHRNNVAKLARLNKAVLNYHANAEREQKKEQERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYISNLTEMVKQHKIEQKRKQVEEQKRKKKKKKLQDGENAEDGGANDDTRIGVIETSTGRTLTGDEAPLMSQLSAFLEAHPGWEPIESDSEEDEDDDEEENESKDKSMGDSEEEKAKKTIHKA-----KVEDDEYKTEE---QTYYSIAHTVHEVVTEQASIMVNGKLKEYQIKGLEWLVSLFNNNLNGILADEMGLGKTIQTIALVTYLMEKKKVNGPFLIIVPLSTLSNWVLEFEKWAPSVVVVSYKGSPAGRRTIQSQMRATKFNVLLTTYEYVIKDKGVLAKLQWKYMIIDEGHRMKNHHCKLTQVLNTHYLAPHRLLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYKHMQSKGVLLTDGSEKGKQGKGGAKALMNTIVQLRKLCNHPFMFQAIEEKYCEHVGTQGSGVITGPDLYRASGKFELLDRILPKLKATNHRVLLFCQMTQLMTIMEDYLSWRGFMYLRLDGTTKAEDRGDLLKKFNDPGSEYFLFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERQQFLQSILHQDDADDEEENEVPDDETVNQMIARTEGEFEIFQKLDLERRREEAKLGPNRKSRLLEEAELPDWLVKDDDEVERWTYEEDEDRFLGRGSRQRKEVDYTDSLTEKEWLKAIDDDGAEYEEEEEDDKKKKKTRKRKKKGEEDDEPMP--------KKRRGAGSLVDPKMKRAMKKLITLVVNYTDSSDGRLLSEPFMKLPSRRELPDYYEIIKKPLTINKLLQKIEEGKYADLDELEKDFMQLCKNAQIYNEEASLIHEDSIVLQSVFTNARQRLE 2002
BLAST of homeotic gene vs. nr
Match: gi|1339072413|ref|XP_023723434.1| (ATP-dependent helicase brm-like isoform X2 [Cryptotermes secundus] >gi|1330879459|gb|PNF17190.1| ATP-dependent helicase brm [Cryptotermes secundus]) HSP 1 Score: 1601.26 bits (4145), Expect = 0.000e+0 Identity = 860/1423 (60.44%), Postives = 1030/1423 (72.38%), Query Frame = 0 Query: 39 GMRPSPSPSPMTGPPNSYPPTQGPPSDLQKLQNSINQMEERGMQNDPRYNQARQLHQNMMSRQGPPPGAPGAPPGAGPPGGPAGP----PGQDKGQFQNPQMLQLRAQIMAYRFLARNQPLPPQIAMAVSGKRPEG--------QGPPGA-------PPYGPSRPGGPPGSASPGGPPNMQAPAPG----GRGPTPNTT---------------------------GPTGGTPGVA---PTGKPNRVTPVAKPAGIDPITLLQERENRLAARVAHRIDELSNLPVSMADDTRTKAEIELRALRLLNFQRQLRAEVVACTRRDTTLETAINVKAYKRTKRQGLREARATEKLEKQQRLEAERRRRQKHQEYLNAVLTHGRDLQNFHRNNLGKIQKLNKAVLNWHANHEREQKKEQERIEKERLRRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYINQLTDMVKQHKVEQVQKQKELRKKAKLE-------EQAGAMLDESSQMSDVRVHVKELSTGKIIRGDNAPLASELESWLEKNPGFEQVPR--------------------------DEDSDDSDGEEKPETTSSAEAILAKAK-EEATKEDEGDGVDYYTIAHTISEEITEQAPMLVGGKLKEYQVKGLEWLVSLYNNCLNGILADEMGLGKTIQTIALITYLMERKKNMGPYLIIVPLSTLSNWALEFEKWAPACNVVSYKGSPAARRTAQNAMRGSKFNVLVTTYEYVIKDKAMLSKIRWKYMIIDEGHRMKNHHCKLTQILNTFYTSNNRLLLTGTPLQNKLPELWALLNFLLPSIFKACNTFEQWFNAPFAITGEKVELNEEETILIIRRLHKVLRPFLLRRLKKDVESQLPDKVEYIVKCEMSGLQRTLYNHMQEKGVMKTD---KINKGKKGAKALMNTIMQLRKLCNHPFMYQPIEEAYAKHIGMPTDIVTGPDVYRSSGKFELIDRILPKLKATGHRVLMFCQMTQCMTIIEDYFNYRGFKFLRLDGMTKSEDRADMLKIFNEKASDYFIFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARFKLNMDEKVIQAGRFNNRSTGSERRELLQSIL-RADEEEEEENEVPDDEVINQMIARSEDEFEKFTQMDLDRRREEAALGPNRKDRLIQIKELPEFLLAEDDDDDE---EEEEEIVYGRGSRAKKETNYNDQLSDKEWLKVI------------------GAEDEEFDDDDEDDEEIKKPGKRVKRKKREDEEVEDEFANQNRKKKKSSAKRLQKKMATLMQIVVQYKDQDERVLSEPFMKLPSKKELPDYYEVIKRPVDIARIMNKIADGKYEDVDAMEKDFVLMCANTQKYNEDGSLIYEDSIVLQSVFTNARERLDAD 1349 GM +P S + P P Q LQ +I MEE+GMQNDPRY+Q L +RQ P G P A P GP K F + Q+ QLR QIMAYR LARNQPL Q+A+AV GKR + QG PG P P GG P S SP P AP+ G G PT +T+ GP G A P K NRVTP+AKPAG+DP+ +LQERENRLAAR+AHRI+EL+NLP MA+D + KA+IELRALRLLNFQRQLR EVVACTR+DT LET+ ++K YKRTKRQGLREARATEKLEKQQ+LEAER+RRQKHQEYLNAVL HG+DL+ +HRNN+ KI +LN+AVLN HAN EREQKKEQERIEKER+RRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYI LT+MVKQHKVEQ +KQ+E +++ K + E + DESSQMSDVRV V E +TGKI+ GD APLAS+ ++WLE +PG+E PR ++SDD+ K A+ ++ KAK E+ ++ + YY+IAHTI+E++TEQA ++V GKLKEYQ++GLEWLVSLYNN LNGILADEMGLGKTIQTIALITYLME+K+ GPYLIIVPLSTLSNW LEFEKWAP+ +V+YKGSP RR Q+ MR +KFNVL+TTYEY+IKDKA+L+K+RWK+MIIDEGHRMKNHHCKLTQ+LNT Y + +RLLLTGTPLQNKLPELWALLNFLLPSIFK+ +TFEQWFNAPFA TGEKVELNEEETILIIRRLHKVLRPFLLRRLKK+VESQLPDKVEYI+KC+MSGLQR LY+HMQ KGV+ TD K +GK GAKALMNTIMQLRKLCNHPFM+Q IE+AY H+G+ +V GPD+YR+SGKFEL+DRILPKLKATGHRVL+FCQMTQ MTI+EDY +RGF +LRLDG TK+EDR ++L+ FN SDYF+FLLSTRAGGLGLNLQ+ADTV+IFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAAR+KLNMDEKVIQAG F+ +STGSER++ L++IL + + ++EEENEVPDDE +NQMIAR E EFE F +MD++RRRE++ LG +R+ RL++ +ELP +L+ ED++ ++ EEEEE YGRGSR +KE +Y D L++KEWLK I + D+DD E V+ +K +++K+M LM IV++Y D D R LS PFMKLPSK+ELPDYY +IKRP+DI +I ++ + KY D +E+DF+ MC N QKYNE+ SLI+EDSIVL++VF NAR RL+ D Sbjct: 93 GMLHNPQGSSVPQLPAQMVSQSSPHDTYQALQRAIGAMEEKGMQNDPRYSQLLALR----ARQVPY----GNPAQADPSRIIQGPGSFLDSTPKHIFSSLQLQQLRVQIMAYRLLARNQPLTSQMALAVQGKRIDSVPSHRMPQQGDPGVVSGVMQQPMRTPVPVGGQPPSQSP--IPGQPAPSAGQQTVGTAPTTSTSPNNGAGTGTSVVQPTSTTQGPRPLPPSGPAAGAQSAAQPPPQQKQNRVTPIAKPAGLDPLIILQERENRLAARIAHRIEELNNLPTVMAEDLKIKAQIELRALRLLNFQRQLRTEVVACTRKDTMLETSCHIKTYKRTKRQGLREARATEKLEKQQKLEAERKRRQKHQEYLNAVLQHGKDLKEYHRNNIAKILRLNRAVLNHHANAEREQKKEQERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYIGNLTEMVKQHKVEQRRKQREQKERKKKKKKRSEDGEIIDGLNDESSQMSDVRVTVMETATGKILCGDEAPLASQFQAWLEMHPGWEAAPREDDEDDDDDDESDVDTDDYDDDDRDLKKNSDDNSLNPKMSEEEKAKVVIQKAKVEDDEYKNYTEEQTYYSIAHTITEKVTEQASIMVNGKLKEYQIRGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEKKRVNGPYLIIVPLSTLSNWVLEFEKWAPSVIIVAYKGSPTMRRNIQSQMRATKFNVLLTTYEYIIKDKAVLAKLRWKFMIIDEGHRMKNHHCKLTQVLNTHYLAPHRLLLTGTPLQNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQRVLYSHMQSKGVLLTDGSEKGKQGKGGAKALMNTIMQLRKLCNHPFMFQHIEKAYCDHVGIHGSVVIGPDLYRASGKFELLDRILPKLKATGHRVLLFCQMTQLMTIMEDYLGWRGFHYLRLDGTTKAEDRGELLRKFNSPESDYFVFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERQKFLKTILHQDEADDEEENEVPDDETVNQMIARCETEFEMFQKMDIERRREDSKLGSDRRPRLMEEQELPTWLVKEDEEVEKWTGEEEEERYYGRGSRQRKEVDYTDSLTEKEWLKAIDDGIEEEEEEERKPARKKFRKRRRKDEDDAGSGNSSAVTVPPVVMVVEQPHVKKRRGRPPLEKGTLVNGKIKKQMRKLMNIVIKYADCDGRTLSGPFMKLPSKQELPDYYNIIKRPIDIKKIQQRLEENKYTSFDDLERDFIQMCRNAQKYNEEASLIHEDSIVLETVFANARIRLEQD 1505
BLAST of homeotic gene vs. nr
Match: gi|1330879462|gb|PNF17193.1| (ATP-dependent helicase brm [Cryptotermes secundus]) HSP 1 Score: 1601.26 bits (4145), Expect = 0.000e+0 Identity = 860/1423 (60.44%), Postives = 1030/1423 (72.38%), Query Frame = 0 Query: 39 GMRPSPSPSPMTGPPNSYPPTQGPPSDLQKLQNSINQMEERGMQNDPRYNQARQLHQNMMSRQGPPPGAPGAPPGAGPPGGPAGP----PGQDKGQFQNPQMLQLRAQIMAYRFLARNQPLPPQIAMAVSGKRPEG--------QGPPGA-------PPYGPSRPGGPPGSASPGGPPNMQAPAPG----GRGPTPNTT---------------------------GPTGGTPGVA---PTGKPNRVTPVAKPAGIDPITLLQERENRLAARVAHRIDELSNLPVSMADDTRTKAEIELRALRLLNFQRQLRAEVVACTRRDTTLETAINVKAYKRTKRQGLREARATEKLEKQQRLEAERRRRQKHQEYLNAVLTHGRDLQNFHRNNLGKIQKLNKAVLNWHANHEREQKKEQERIEKERLRRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYINQLTDMVKQHKVEQVQKQKELRKKAKLE-------EQAGAMLDESSQMSDVRVHVKELSTGKIIRGDNAPLASELESWLEKNPGFEQVPR--------------------------DEDSDDSDGEEKPETTSSAEAILAKAK-EEATKEDEGDGVDYYTIAHTISEEITEQAPMLVGGKLKEYQVKGLEWLVSLYNNCLNGILADEMGLGKTIQTIALITYLMERKKNMGPYLIIVPLSTLSNWALEFEKWAPACNVVSYKGSPAARRTAQNAMRGSKFNVLVTTYEYVIKDKAMLSKIRWKYMIIDEGHRMKNHHCKLTQILNTFYTSNNRLLLTGTPLQNKLPELWALLNFLLPSIFKACNTFEQWFNAPFAITGEKVELNEEETILIIRRLHKVLRPFLLRRLKKDVESQLPDKVEYIVKCEMSGLQRTLYNHMQEKGVMKTD---KINKGKKGAKALMNTIMQLRKLCNHPFMYQPIEEAYAKHIGMPTDIVTGPDVYRSSGKFELIDRILPKLKATGHRVLMFCQMTQCMTIIEDYFNYRGFKFLRLDGMTKSEDRADMLKIFNEKASDYFIFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARFKLNMDEKVIQAGRFNNRSTGSERRELLQSIL-RADEEEEEENEVPDDEVINQMIARSEDEFEKFTQMDLDRRREEAALGPNRKDRLIQIKELPEFLLAEDDDDDE---EEEEEIVYGRGSRAKKETNYNDQLSDKEWLKVI------------------GAEDEEFDDDDEDDEEIKKPGKRVKRKKREDEEVEDEFANQNRKKKKSSAKRLQKKMATLMQIVVQYKDQDERVLSEPFMKLPSKKELPDYYEVIKRPVDIARIMNKIADGKYEDVDAMEKDFVLMCANTQKYNEDGSLIYEDSIVLQSVFTNARERLDAD 1349 GM +P S + P P Q LQ +I MEE+GMQNDPRY+Q L +RQ P G P A P GP K F + Q+ QLR QIMAYR LARNQPL Q+A+AV GKR + QG PG P P GG P S SP P AP+ G G PT +T+ GP G A P K NRVTP+AKPAG+DP+ +LQERENRLAAR+AHRI+EL+NLP MA+D + KA+IELRALRLLNFQRQLR EVVACTR+DT LET+ ++K YKRTKRQGLREARATEKLEKQQ+LEAER+RRQKHQEYLNAVL HG+DL+ +HRNN+ KI +LN+AVLN HAN EREQKKEQERIEKER+RRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYI LT+MVKQHKVEQ +KQ+E +++ K + E + DESSQMSDVRV V E +TGKI+ GD APLAS+ ++WLE +PG+E PR ++SDD+ K A+ ++ KAK E+ ++ + YY+IAHTI+E++TEQA ++V GKLKEYQ++GLEWLVSLYNN LNGILADEMGLGKTIQTIALITYLME+K+ GPYLIIVPLSTLSNW LEFEKWAP+ +V+YKGSP RR Q+ MR +KFNVL+TTYEY+IKDKA+L+K+RWK+MIIDEGHRMKNHHCKLTQ+LNT Y + +RLLLTGTPLQNKLPELWALLNFLLPSIFK+ +TFEQWFNAPFA TGEKVELNEEETILIIRRLHKVLRPFLLRRLKK+VESQLPDKVEYI+KC+MSGLQR LY+HMQ KGV+ TD K +GK GAKALMNTIMQLRKLCNHPFM+Q IE+AY H+G+ +V GPD+YR+SGKFEL+DRILPKLKATGHRVL+FCQMTQ MTI+EDY +RGF +LRLDG TK+EDR ++L+ FN SDYF+FLLSTRAGGLGLNLQ+ADTV+IFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAAR+KLNMDEKVIQAG F+ +STGSER++ L++IL + + ++EEENEVPDDE +NQMIAR E EFE F +MD++RRRE++ LG +R+ RL++ +ELP +L+ ED++ ++ EEEEE YGRGSR +KE +Y D L++KEWLK I + D+DD E V+ +K +++K+M LM IV++Y D D R LS PFMKLPSK+ELPDYY +IKRP+DI +I ++ + KY D +E+DF+ MC N QKYNE+ SLI+EDSIVL++VF NAR RL+ D Sbjct: 93 GMLHNPQGSSVPQLPAQMVSQSSPHDTYQALQRAIGAMEEKGMQNDPRYSQLLALR----ARQVPY----GNPAQADPSRIIQGPGSFLDSTPKHIFSSLQLQQLRVQIMAYRLLARNQPLTSQMALAVQGKRIDSVPSHRMPQQGDPGVVSGVMQQPMRTPVPVGGQPPSQSP--IPGQPAPSAGQQTVGTAPTTSTSPNNGAGTGTSVVQPTSTTQGPRPLPPSGPAAGAQSAAQPPPQQKQNRVTPIAKPAGLDPLIILQERENRLAARIAHRIEELNNLPTVMAEDLKIKAQIELRALRLLNFQRQLRTEVVACTRKDTMLETSCHIKTYKRTKRQGLREARATEKLEKQQKLEAERKRRQKHQEYLNAVLQHGKDLKEYHRNNIAKILRLNRAVLNHHANAEREQKKEQERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYIGNLTEMVKQHKVEQRRKQREQKERKKKKKKRSEDGEIIDGLNDESSQMSDVRVTVMETATGKILCGDEAPLASQFQAWLEMHPGWEAAPREDDEDDDDDDESDVDTDDYDDDDRDLKKNSDDNSLNPKMSEEEKAKVVIQKAKVEDDEYKNYTEEQTYYSIAHTITEKVTEQASIMVNGKLKEYQIRGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEKKRVNGPYLIIVPLSTLSNWVLEFEKWAPSVIIVAYKGSPTMRRNIQSQMRATKFNVLLTTYEYIIKDKAVLAKLRWKFMIIDEGHRMKNHHCKLTQVLNTHYLAPHRLLLTGTPLQNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQRVLYSHMQSKGVLLTDGSEKGKQGKGGAKALMNTIMQLRKLCNHPFMFQHIEKAYCDHVGIHGSVVIGPDLYRASGKFELLDRILPKLKATGHRVLLFCQMTQLMTIMEDYLGWRGFHYLRLDGTTKAEDRGELLRKFNSPESDYFVFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERQKFLKTILHQDEADDEEENEVPDDETVNQMIARCETEFEMFQKMDIERRREDSKLGSDRRPRLMEEQELPTWLVKEDEEVEKWTGEEEEERYYGRGSRQRKEVDYTDSLTEKEWLKAIDDGIEEEEEEERKPARKKFRKRRRKDEDDAGSGNSSAVTVPPVVMVVEQPHVKKRRGRPPLEKGTLVNGKIKKQMRKLMNIVIKYADCDGRTLSGPFMKLPSKQELPDYYNIIKRPIDIKKIQQRLEENKYTSFDDLERDFIQMCRNAQKYNEEASLIHEDSIVLETVFANARIRLEQD 1505
BLAST of homeotic gene vs. nr
Match: gi|795047491|ref|XP_011868918.1| (PREDICTED: ATP-dependent helicase brm isoform X2 [Vollenhovia emeryi]) HSP 1 Score: 1601.26 bits (4145), Expect = 0.000e+0 Identity = 827/1319 (62.70%), Postives = 1016/1319 (77.03%), Query Frame = 0 Query: 65 DLQKLQNSINQMEERGMQNDPRYNQARQLHQNMMSRQGPPPGAPGAPPGAGPPGGPAGPPGQDKGQFQNPQMLQLRAQIMAYRFLARNQPLPPQIAMAVSGKRPEGQGPPGAPPYGPSRPGGPPGSASPGGPPNMQAPAPGGRGPTPNTTGPTGGT-PGVAPT----------GKPNRVTPVAKPAGIDPITLLQERENRLAARVAHRIDELSNLPVSMADDTRTKAEIELRALRLLNFQRQLRAEVVACTRRDTTLETAINVKAYKRTKRQGLREARATEKLEKQQRLEAERRRRQKHQEYLNAVLTHGRDLQNFHRNNLGKIQKLNKAVLNWHANHEREQKKEQERIEKERLRRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYINQLTDMVKQHKVEQVQKQKELRKKAKLEE--QAGAMLDESSQMSDVRVHVKELSTGKIIRGDNAPLASELESWLEKNPGFEQVPRDEDSDDSDGEEKPETTSSAEAILAKAKEEATK-----------EDEGDGVDYYTIAHTISEEITEQAPMLVGGKLKEYQVKGLEWLVSLYNNCLNGILADEMGLGKTIQTIALITYLMERKKNMGPYLIIVPLSTLSNWALEFEKWAPACNVVSYKGSPAARRTAQNAMRGSKFNVLVTTYEYVIKDKAMLSKIRWKYMIIDEGHRMKNHHCKLTQILNTFYTSNNRLLLTGTPLQNKLPELWALLNFLLPSIFKACNTFEQWFNAPFAITGEKVELNEEETILIIRRLHKVLRPFLLRRLKKDVESQLPDKVEYIVKCEMSGLQRTLYNHMQEKGVMKTD---KINKGKKGAKALMNTIMQLRKLCNHPFMYQPIEEAYAKHIGM-PTDIVTGPDVYRSSGKFELIDRILPKLKATGHRVLMFCQMTQCMTIIEDYFNYRGFKFLRLDGMTKSEDRADMLKIFNEKASDYFIFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARFKLNMDEKVIQAGRFNNRSTGSERRELLQSIL-RADEEEEEENEVPDDEVINQMIARSEDEFEKFTQMDLDRRREEAALGPNRKDRLIQIKELPEFLLAEDDDDDE---EEEEEIVYGRGSRAKKETNYNDQLSDKEWLKVIGAEDEEFDDDDEDDEEIKKPGKRVKRKKREDEEVEDEFANQNRKKKKSSA---KRLQKKMATLMQIVVQYKD-QDERVLSEPFMKLPSKKELPDYYEVIKRPVDIARIMNKIADGKYEDVDAMEKDFVLMCANTQKYNEDGSLIYEDSIVLQSVFTNARERLD 1347 +L LQ +I+ MEE+G+Q DPRY+Q L +RQG G G DK F Q+ QLRAQIMAYR LARNQP+P Q+A+A G GAPP PPG P P P G + P PN GPTG PG K NRVT +AKP G+DP+ +LQERENR+AAR++ R+++LSNLP +M +D R +A+IELR LR+LNFQRQLR+E++ACTR+DTTLETA+NVKAYKRTKRQGLREARATEKLEKQQ+LEAER+RRQKHQE+L++VL HG+D + FHRNN+ K+ +LNKAVLN+HAN EREQKKEQERIEKER+RRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYI+ LT+MVKQHK+EQ +KQ E +K+ K ++ Q G ++ D RV V E +TG+ + GD APL S+L ++LE NPG+E + D + D+ D + S + ++E+ K E + + YY+IAHT+ E +TEQA ++V G LKEYQ+KGLEWLVSL+NN LNGILADEMGLGKTIQTIAL+TYLME+KK GP+LIIVPLSTLSNW LEFEKWAP+ VVSYKGSPA RR Q+ MR +KFNVL+TTYEYVIKDK +L+K++WKYMIIDEGHRMKNHHCKLTQ+LNT Y + +RLLLTGTPLQNKLPELWALLNFLLPSIFK+C+TFEQWFNAPFA TGEKVELNEEETILIIRRLHKVLRPFLLRRLKK+VESQLPDKVEYI+KC+MSGLQ+ LY HMQ KGV+ TD K +GK GAKALMNTI+QLRKLCNHPFM+Q IEE Y +H+G + ++TGPD++R+SGKFEL+DRILPKLKAT HRVL+FCQMTQ MTI+EDY ++RGF +LRLDG TK+EDR D+LK FN+ S+YF+FLLSTRAGGLGLNLQ ADTV+IFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAAR+KLNMDEKVIQAG F+ +STGSER++ LQSIL + D ++EEENEVPDDE +NQMIAR+E EFE F ++DL+RRREEA LGPNRK RL++ ELP++L+ +DD+ + EE+E+ GRGSR +KE +Y D L++KEWLK I DDD + EE ++ K+ K+ ++ ++ E++ +K++ + + ++++ M L+ +VV Y D D R+LSEPFMKLPS++ELPDYYE+IK+P+ I +++ KI +GKY D+D +EKDF+ +C N Q YNE+ SLI+EDSIVLQSVFTNAR+RL+ Sbjct: 744 NLNALQKAIDSMEEKGLQEDPRYSQLLALR----ARQGS---------GMG-----------DKQAFNTQQLQQLRAQIMAYRLLARNQPVPQQVALAAQG---------GAPP--------PPGIQRPIDPSQGPVPTVGPQIPGPNVIGPTGAPRPGCQTPQQQQQQPQSGAKANRVTSIAKPVGLDPLLILQERENRVAARISLRMEQLSNLPTNMPEDLRIQAQIELRMLRVLNFQRQLRSEIIACTRKDTTLETAVNVKAYKRTKRQGLREARATEKLEKQQKLEAERKRRQKHQEFLSSVLQHGKDFKEFHRNNVAKLARLNKAVLNYHANAEREQKKEQERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYISNLTEMVKQHKIEQKRKQVEEQKRKKKKKKLQDGESTEDGGSNDDTRVGVIETATGRTLTGDEAPLMSQLSAFLEANPGWEPIESDSEDDEDDENGDDDDNESKYKAMGDSEEDRAKKTIHKAKVEDDEYKTEEQTYYSIAHTVHEVVTEQASIMVNGNLKEYQIKGLEWLVSLFNNNLNGILADEMGLGKTIQTIALVTYLMEKKKVNGPFLIIVPLSTLSNWVLEFEKWAPSVVVVSYKGSPAGRRAIQSQMRATKFNVLLTTYEYVIKDKGVLAKLQWKYMIIDEGHRMKNHHCKLTQVLNTHYLAPHRLLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYKHMQSKGVLLTDGSEKGKQGKGGAKALMNTIVQLRKLCNHPFMFQAIEEKYCEHVGTQGSGVITGPDLFRASGKFELLDRILPKLKATNHRVLLFCQMTQLMTIMEDYLSWRGFMYLRLDGTTKAEDRGDLLKKFNDPGSEYFLFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERQQFLQSILHQDDADDEEENEVPDDETVNQMIARTEGEFETFQKLDLERRREEAKLGPNRKSRLLEEAELPDWLVKDDDEVERWTYEEDEDRFLGRGSRQRKEVDYTDSLTEKEWLKAI-------DDDGAEYEEEEEEDKKKKKTRKRKKKGEEDDEPMPKKRRGAGSLVDPKMKRAMKKLITVVVNYTDSSDGRLLSEPFMKLPSRRELPDYYEIIKKPLTINKLLQKIEEGKYADLDELEKDFMQLCKNAQIYNEEASLIHEDSIVLQSVFTNARQRLE 2014 The following BLAST results are available for this feature:
BLAST of homeotic gene vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 25
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BLAST of homeotic gene vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of homeotic gene vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
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The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold495_size155559:39973..44957+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold495_size155559-snap-gene-0.32 ID=maker-scaffold495_size155559-snap-gene-0.32|Name=homeotic gene|organism=Tigriopus kingsejongensis|type=gene|length=4985bp|location=Sequence derived from alignment at scaffold495_size155559:39973..44957+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'homeotic gene' has the following synonyms
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