BLAST of homeotic gene vs. L. salmonis genes
Match: EMLSAG00000000894 (supercontig:LSalAtl2s:LSalAtl2s1155:69336:76256:-1 gene:EMLSAG00000000894 transcript:EMLSAT00000000894 description:"maker-LSalAtl2s1155-augustus-gene-0.8")

HSP 1 Score: 87.4261 bits (215), Expect = 2.211e-17
Identity = 52/132 (39.39%), Postives = 79/132 (59.85%), Query Frame = 0

Query: 1224 DEFANQNRKKKKSSAKRLQKKMATLMQIVVQYKDQDERVLSEPFMKLPSKKELPDYYEVIKRPVDIARIMNKIADGKYEDVDAMEKDFVLMCANTQKYNEDGSLIYEDSIVLQSVF-TNARER-LDADPDAG 1353
            DE  N    + +S     +K+M +L   V+ +K +DE  L   FM+ PSKK+ PDYYE+I  P+D++ I  KI  G Y+  + + +D  LM  N ++YNE+GS IY+D+ +L+ V  T ARE  ++A P  G
Sbjct:  315 DESGNSLEGRPRSQRANTRKRMRSLYNAVLNFKTEDELSLVGMFMEKPSKKDYPDYYEIITNPIDMSMIDAKIKTGVYKSEEDVIQDMKLMFINCRRYNEEGSDIYKDANLLEKVLVTKAREMGINAGPGRG 446          

HSP 2 Score: 87.0409 bits (214), Expect = 2.596e-17
Identity = 43/98 (43.88%), Postives = 60/98 (61.22%), Query Frame = 0

Query: 1241 LQKKMATLMQIVVQYKDQDERVLSEPFMKLPSKKELPDYYEVIKRPVDIARIMNKIADGKYEDVDAMEKDFVLMCANTQKYNEDGSLIYEDSIVLQSV 1338
            L +K+  L + +  YKD   R LS  F+ LP+ +E  DYYE IK+P+D  +I  K+    YE V+   +DF+LM  N  KYNE  S IY+D+I LQS+
Sbjct:  455 LSQKLKILFETLRDYKDHKGRQLSLIFLXLPNLREFADYYETIKKPIDFEKISGKMKQNAYESVEEALRDFILMFDNACKYNEPDSQIYKDAITLQSL 552          

HSP 3 Score: 66.2402 bits (160), Expect = 5.596e-11
Identity = 39/126 (30.95%), Postives = 65/126 (51.59%), Query Frame = 0

Query: 1230 NRKKKKSSAKRLQKKMATLMQIVVQYKD--QDERVLSEPFMKLPSKKELPDYYEVIKRPVDIARIMNKIADGKYEDVDAMEKDFVLMCANTQKYNEDGSLIYEDSIVLQSVFTNARERLDADPDAG 1353
             R++  + A  L + +  L+ +V+   D     R++  PF  LPS+K  P+Y++VI  P+D+  I  KI    Y  +  +E D + MC N   +NE GS IY D+  +  +  + R  L+A+  A 
Sbjct:   72 TREEPHNEAGXLIEMLEDLLAVVMXAIDPFDPNRLVHIPFRLLPSQKRYPEYFKVINDPIDLKMIATKIQTTSYTTLSELEDDLIKMCRNAMTFNEPGSQIYRDAKQVLKLTKSKRYELEANKIAA 197          

BLAST of homeotic gene vs. L. salmonis genes
Match: EMLSAG00000010402 (supercontig:LSalAtl2s:LSalAtl2s68:516095:533261:1 gene:EMLSAG00000010402 transcript:EMLSAT00000010402 description:"maker-LSalAtl2s68-augustus-gene-5.2")

HSP 1 Score: 85.8853 bits (211), Expect = 7.267e-17
Identity = 43/97 (44.33%), Postives = 63/97 (64.95%), Query Frame = 0

Query: 1243 KKMATLMQIVVQYKDQDERVLSEPFMKLPSKKELPDYYEVIKRPVDIARIMNKIADGKYEDVDAMEKDFVLMCANTQKYNEDGSLIYEDSIVLQSVF 1339
            K M  L   ++ +KD +   L   FM+LPSKK+ PDYYEVI+ P+D+  I NKI +G Y++ +   +D  LM AN +KYNE+ S IY+D++ L+ V 
Sbjct:  366 KNMRILYNTILIHKDDEGVQLVSAFMELPSKKDYPDYYEVIEHPMDMNTINNKIKNGAYKNEEEYLQDMKLMFANCKKYNEERSEIYKDAVTLERVL 462          

HSP 2 Score: 83.9593 bits (206), Expect = 2.415e-16
Identity = 44/107 (41.12%), Postives = 65/107 (60.75%), Query Frame = 0

Query: 1232 KKKKSSAKRLQKKMATLMQIVVQYKDQDERVLSEPFMKLPSKKELPDYYEVIKRPVDIARIMNKIADGKYEDVDAMEKDFVLMCANTQKYNEDGSLIYEDSIVLQSV 1338
            KKK  S+     KM  L   +  YKD   R LS  F++LP++++  DYYEVIK+P+D  +I  KI    Y++++    DF+LM  N  K+NE  S IY+D++ LQS+
Sbjct:  482 KKKFLSSDSKNIKMKALFDALRDYKDVKGRQLSLIFLRLPNQRDFADYYEVIKKPIDFEKISTKIKTYVYDNLEETLADFILMFDNACKFNEPDSQIYKDALTLQSL 588          

HSP 3 Score: 56.9954 bits (136), Expect = 4.590e-8
Identity = 31/105 (29.52%), Postives = 60/105 (57.14%), Query Frame = 0

Query: 1244 KMATLMQIVVQYKDQDERVLSEPFMKLPSKKELPDYYEVIKRPVDIARIMNKIADGKYEDVDAMEKDFVLMCANTQKYNEDGSLIYEDSIVLQSVFTNARERLDA 1348
            +++TL   + +YK +D   L EPF++ P ++  P +YE +  P+D+ RI  K+   +YE +   ++D  LM ++   Y  + S   +++  L+ +F  A ER++A
Sbjct:   35 QISTLYDFIRKYKREDGTELCEPFIRAPKRRNDPGFYEGVSTPMDLLRIQQKMKMEEYESLWVFKEDVDLMLSHWLXYYPENSEESKNARELKELFYKAYERVEA 139          

BLAST of homeotic gene vs. L. salmonis genes
Match: EMLSAG00000004415 (supercontig:LSalAtl2s:LSalAtl2s231:1197910:1199938:1 gene:EMLSAG00000004415 transcript:EMLSAT00000004415 description:"snap_masked-LSalAtl2s231-processed-gene-12.23")

HSP 1 Score: 77.0258 bits (188), Expect = 2.014e-14
Identity = 62/235 (26.38%), Postives = 104/235 (44.26%), Query Frame = 0

Query:  910 SGKFELIDRILPKLKATGHRVLMFCQMTQCMTIIEDYFNYRGFKFL-------------------------RLDGMTKSEDRADMLKIFNEKAS-DYFIFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARFKLNMDEKVIQAGRFNNRSTGSERRELLQSILRADEEEEEENEVPDDEVINQMIARSEDEFEKFTQMD 1118
            S K  L+  IL      G + L+F Q    + +IE + +     FL                         R+DG T    R      FN+ ++ +  +FL+ST+AGGLG+NL  A+ V+IFD+ WNP  DLQ+  R +R GQ   V+          +E+I      K ++  +V+   +     + +E  EL     +  +EE    +VP D V  +++++  ++  K+   D
Sbjct:  122 SPKMTLLMEILKNADILGDKTLVFSQSLLSLDMIETFLSKMNEYFLESDKEKIPECLKPFIRPWIQERNYFRMDGSTPPHVRKKWCNYFNKTSNKEMKLFLISTKAGGLGINLVAANRVIIFDASWNPAHDLQSIFRVYRFGQTKPVQ---------WKEKIYDRQVTKQSLSARVVDEQQIERHFSMNELTELYTFKDQDLDEERPVPKVPIDNVFAEILSKYPEKIWKYHDHD 347          

BLAST of homeotic gene vs. L. salmonis genes
Match: EMLSAG00000004414 (supercontig:LSalAtl2s:LSalAtl2s231:1196161:1197658:1 gene:EMLSAG00000004414 transcript:EMLSAT00000004414 description:"snap_masked-LSalAtl2s231-processed-gene-12.26")

HSP 1 Score: 75.8702 bits (185), Expect = 3.622e-14
Identity = 58/178 (32.58%), Postives = 83/178 (46.63%), Query Frame = 0

Query:  609 GILADEMGLGKTIQTIALI-TYLMERKKNMGPYLIIVPLSTLSNWALEFEKWAP---ACNVVSYKGSPAARRTAQNAMRGSKFNVLVTTYEYVIKDKAMLSKI----------RWKYMII-------------DEGHRMKNHHCKLTQILNTFYTSNNRLLLTGTPLQNKLPELWALL 759
             ILA  MGLGKT+QTIALI T L    +++   L+I P++T+ NW  EF+KW       +V    G         N  R  + N  +     +I    M   +          R K +I+             DEGH +KN +  L + +N   T   R++LTGTPLQN L E +A++
Sbjct:  310 AILAHCMGLGKTLQTIALIHTVLTNFPEHITKVLVICPVNTVKNWKDEFDKWCKDSLELDVYELSGDKG------NDDRTDRLNYWLKEGGXLIIGYDMFRNLTTSASRKLNKRQKGIILRSLVDPGPDLVVCDEGHVLKNRNSALNKSINKIGTK-RRIILTGTPLQNNLSEYFAMV 480          

BLAST of homeotic gene vs. L. salmonis genes
Match: EMLSAG00000000927 (supercontig:LSalAtl2s:LSalAtl2s1161:15715:16165:-1 gene:EMLSAG00000000927 transcript:EMLSAT00000000927 description:"maker-LSalAtl2s1161-snap-gene-0.17")

HSP 1 Score: 67.0106 bits (162), Expect = 1.311e-13
Identity = 32/57 (56.14%), Postives = 43/57 (75.44%), Query Frame = 0

Query:  323 KRQGLREARATEKLEKQQRLEAERRRRQKHQEYLNAVLTHGRDLQNFHRNNLGKIQK 379
            K+QG  EA  +EKLEKQ R+EAER+ RQ+HQE+L  + +H RD Q+FH+NN  K+ K
Sbjct:   14 KKQGGGEACTSEKLEKQHRVEAERKCRQRHQEFLYTIFSHVRDFQHFHKNNQMKLLK 70          

BLAST of homeotic gene vs. SwissProt
Match: gi|19857556|sp|P25439.2|BRM_DROME (RecName: Full=ATP-dependent helicase brm; AltName: Full=Homeotic gene regulator; AltName: Full=Protein brahma)

HSP 1 Score: 1497.26 bits (3875), Expect = 0.000e+0
Identity = 833/1493 (55.79%), Postives = 1007/1493 (67.45%), Query Frame = 0

Query:   25 GPHSPMPPPESPSPGMRPSPSPSPMTG-PPNSYPPTQ------------------GPPSDLQKLQNSINQMEERGMQNDPRYNQARQLHQNMMSRQGPPPGAPGAPPGAGPPGGPAGPPGQDKGQFQN-PQMLQLRAQIMAYRFLARNQPLPPQIAMAV---------------------------------------------SGKRPEGQGPPGAPPYGPSRPGGPPGSASPGGPPNMQAPAPGG--------------------------------------RGPTPNTTGPTGGTP---------------------------------GVAPTG----KPNRVTPVAKPAGIDPITLLQERENRLAARVAHRIDELSNLPVSMADDTRTKAEIELRALRLLNFQRQLRAEVVACTRRDTTLETAINVKAYKRTKRQGLREARATEKLEKQQRLEAERRRRQKHQEYLNAVLTHGRDLQNFHRNNLGKIQKLNKAVLNWHANHEREQKKEQERIEKERLRRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYINQLTDMVKQHKVEQVQKQKELRKKAKLEEQAGAM------LDESSQMSDVRVHVKELSTGKIIRGDNAPLASELESWLEKNPGFEQVPRDEDSDDSDGEEKP---ETTSSAEAILAKAKEEATKEDEGDGV---------------DYYTIAHTISEEITEQAPMLVGGKLKEYQVKGLEWLVSLYNNCLNGILADEMGLGKTIQTIALITYLMERKKNMGPYLIIVPLSTLSNWALEFEKWAPACNVVSYKGSPAARRTAQNAMRGSKFNVLVTTYEYVIKDKAMLSKIRWKYMIIDEGHRMKNHHCKLTQILNTFYTSNNRLLLTGTPLQNKLPELWALLNFLLPSIFKACNTFEQWFNAPFAITGEKVELNEEETILIIRRLHKVLRPFLLRRLKKDVESQLPDKVEYIVKCEMSGLQRTLYNHMQEKGVMKTD---KINKGKKGAKALMNTIMQLRKLCNHPFMYQPIEEAYAKHIGMPTDIVTGPDVYRSSGKFELIDRILPKLKATGHRVLMFCQMTQCMTIIEDYFNYRGFKFLRLDGMTKSEDRADMLKIFNEKASDYFIFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARFKLNMDEKVIQAGRFNNRSTGSERRELLQSIL-RADEEEEEENEVPDDEVINQMIARSEDEFEKFTQMDLDRRREEAALGPNRKDRLIQIKELPEFLLAEDDDDDE---EEEEEIVYGRGSRAKKETNYNDQLSDKEWLKVIGAEDEEFDDDDEDDEEIKKPGKRVKRKKREDEEVEDEFANQNRKKKKSSAKRLQKKMATLMQIVVQYKDQDERVLSEPFMKLPSKKELPDYYEVIKRPVDIARIMNKIADGKYEDVDAMEKDFVLMCANTQKYNEDGSLIYEDSIVLQSVFTNARERL 1346
            GPH  M  P +      P+ SP    G PPN+  PTQ                      +L  LQ +I+ MEE+G+Q DPRY+Q   +                                  K Q  N  Q+  LR QI AYR LARN+P+  Q+  A+                                             +G  P+   PP + PYGP  PG     A P  PP+MQ   P                                         G  P + GP+GG P                                  V P G    KPNR+T VAKP G+DPITLLQERENR+AAR++ R+ EL  LP +M++D R +A IELRALR+LNFQRQLR E V CTRRDTTLETA+N+K YKRTKRQGLREARATEKLEKQQ+LEAER+RRQKH E+L AVL HG+DL+ FHRNN  ++ ++NKAV+N HAN EREQKKEQERIEKER+RRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYI+ LT MVKQHK +Q++K++E  K+    ++   M      +DE S ++D+RVHV E  TGK + GD+AP+   L  WL  +PG++ +  +EDS  S+ + KP   E  ++ E    KA+     ED  D +                YY+IAHTI E++ EQA ++V G LKEYQ+KGLEWLVSLYNN LNGILADEMGLGKTIQTI+L+TYLM+RKK MGPYLIIVPLSTL NW LEFEKWAPA  VVSYKGSP  RR  QN MR +KFNVL+TTYEYVIKDKA+L+KI+WKYMIIDEGHRMKNHHCKLTQ+LNT Y +  RLLLTGTPLQNKLPELWALLNFLLPSIFK+C+TFEQWFNAPFA TGEKVELNEEETILIIRRLHKVLRPFLLRRLKK+VE QLPDKVEYI+KC+MS LQR LY HMQ KGV+ TD   K   GK GAKALMNTI+QLRKLCNHPFM+Q IEE Y  H G    +V+GPD+YR SGKFEL+DRILPKLKAT HRVL+FCQMTQCMTIIEDY  +R F +LRLDG TK+EDR ++L+ FN K SD F+FLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQ+NEVRVLRLMTVNSVEERILAAAR+KLNMDEKVIQAG F+ +STGSER++ LQ+IL + D EEEEENEVPDDE+IN MIARSE+E E F +MD +R++E+  + P R +RLI   ELP++L  +DD+ +    + +E+ + GRGSR +KE +Y D L++KEWLK I    E      +++EE     ++ +++K   EE +D+     R+++++  KR +K+M  +M  V+++ +QD R LSEPFMKLPS++ LPDYYE+IKRPVDI +I+ +I D KY D++ +EKDF+ +C N Q YNE+ SLIY DSI LQ VF  AR+R+
Sbjct:   85 GPHMGMQMPPTG-----PNMSPYQTHGMPPNA--PTQPCIVSPGGPPGGPPPPERSSQENLHALQRAIDSMEEKGLQEDPRYSQLLAMR------------------------------ATSKHQHLNGNQVNLLRTQITAYRLLARNKPISMQMQQALQAAQQQPPPGPPIGPPGAPGGPPPGSQHAGQPPVPPQQQQQPPPSAGTPPQCSTPPASNPYGPPVPGQKMQVAPP--PPHMQQGQPLPPQPPQVGGPPPIQQQQPPQQQQQQSQPPPPEPHQHQLPNGGKPLSMGPSGGQPLIPSSPMQPQVRGTLPGMPPGSQVPQPGGGPQRQVPPAGMPMPKPNRITTVAKPVGLDPITLLQERENRIAARISLRMQELQRLPATMSEDLRLQAAIELRALRVLNFQRQLRMEFVQCTRRDTTLETALNIKLYKRTKRQGLREARATEKLEKQQKLEAERKRRQKHLEFLAAVLQHGKDLREFHRNNKAQLARMNKAVMNHHANAEREQKKEQERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYISNLTQMVKQHKDDQMKKKEEEGKRLIQFKKELLMSGEYIGIDEGSIVADMRVHVVEQCTGKKLTGDDAPMLKHLHRWLNMHPGWDWIDDEEDSCGSNDDHKPKVEEQPTATEDATDKAQATGNDEDAKDLITKAKVEDDEYRTEEQTYYSIAHTIHEKVVEQASIMVNGTLKEYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTISLVTYLMDRKKVMGPYLIIVPLSTLPNWVLEFEKWAPAVGVVSYKGSPQGRRLLQNQMRATKFNVLLTTYEYVIKDKAVLAKIQWKYMIIDEGHRMKNHHCKLTQVLNTHYIAPYRLLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVEHQLPDKVEYIIKCDMSALQRVLYKHMQSKGVLLTDGSEKGKHGKGGAKALMNTIVQLRKLCNHPFMFQHIEEKYCDHTG-GHGVVSGPDLYRVSGKFELLDRILPKLKATNHRVLLFCQMTQCMTIIEDYLGWRQFGYLRLDGTTKAEDRGELLRKFNAKGSDVFVFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQRNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERQQFLQTILHQDDNEEEEENEVPDDEMINMMIARSEEEIEIFKRMDAERKKEDEEIHPGR-ERLIDESELPDWLTKDDDEVERFHYQYDEDTILGRGSRQRKEVDYTDSLTEKEWLKAIDDGAEF-----DEEEEEDDSKRKRRKRKNRKEESDDDSLILKRRRRQNLDKRSKKQMHKIMSAVIKH-NQDGRTLSEPFMKLPSRQRLPDYYEIIKRPVDIKKILQRIEDCKYADLNELEKDFMQLCQNAQIYNEEASLIYLDSIALQKVFVGARQRI 1530          

BLAST of homeotic gene vs. SwissProt
Match: gi|116242792|sp|P51532.2|SMCA4_HUMAN (RecName: Full=Transcription activator BRG1; AltName: Full=ATP-dependent helicase SMARCA4; AltName: Full=BRG1-associated factor 190A; Short=BAF190A; AltName: Full=Mitotic growth and transcription activator; AltName: Full=Protein BRG-1; AltName: Full=Protein brahma homolog 1; AltName: Full=SNF2-beta; AltName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 4)

HSP 1 Score: 1403.65 bits (3632), Expect = 0.000e+0
Identity = 739/1268 (58.28%), Postives = 916/1268 (72.24%), Query Frame = 0

Query:  196 PPNMQAPAPGGRGPTPNTTGPTGGTPGVAPTGKPNRVTPVAKPAGIDPITLLQERENRLAARVAHRIDELSNLPVSMADDTRTKAEIELRALRLLNFQRQLRAEVVACTRRDTTLETAINVKAYKRTKRQGLREARATEKLEKQQRLEAERRRRQKHQEYLNAVLTHGRDLQNFHRNNLGKIQKLNKAVLNWHANHEREQKKEQERIEKERLRRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYINQLTDMVKQHKVEQVQKQKELRKKAKLEEQA----------GAMLDESSQMSDVRVHVKELSTGKIIRGDNAPLASELESWLEKNPGFEQVPR-------------------------------------DEDSDDSDGEEKPETTSSAEAILAKAKEEATKEDEGDGVD---------YYTIAHTISEEITEQAPMLVGGKLKEYQVKGLEWLVSLYNNCLNGILADEMGLGKTIQTIALITYLMERKKNMGPYLIIVPLSTLSNWALEFEKWAPACNVVSYKGSPAARRTAQNAMRGSKFNVLVTTYEYVIKDKAMLSKIRWKYMIIDEGHRMKNHHCKLTQILNTFYTSNNRLLLTGTPLQNKLPELWALLNFLLPSIFKACNTFEQWFNAPFAITGEKVELNEEETILIIRRLHKVLRPFLLRRLKKDVESQLPDKVEYIVKCEMSGLQRTLYNHMQEKGVMKTD---KINKGKKGAKALMNTIMQLRKLCNHPFMYQPIEEAYAKHIGMPTDIVTGPDVYRSSGKFELIDRILPKLKATGHRVLMFCQMTQCMTIIEDYFNYRGFKFLRLDGMTKSEDRADMLKIFNEKASDYFIFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARFKLNMDEKVIQAGRFNNRSTGSERRELLQSILRADEEEE---------------------------------EENEVPDDEVINQMIARSEDEFEKFTQMDLDRRREEAALGPNRKDRLIQIKELPEFLLAEDDDDDE---EEEEEIVYGRGSRAKKETNYNDQLSDKEWLKVIGAEDEEFDDDDEDDEEIKKPGKRVKRKKREDEEV-------------EDEFANQNRKKKKSSAKRLQ-------KKMATLMQIVVQYKDQDE-RVLSEPFMKLPSKKELPDYYEVIKRPVDIARIMNKIADGKYEDVDAMEKDFVLMCANTQKYNEDGSLIYEDSIVLQSVFTNARERLD 1347
            PP  Q+P             P    P V    K +R+TP+ KP G+DP+ +LQERE RL AR+AHRI EL NLP S+A D RTKA IEL+ALRLLNFQRQLR EVV C RRDT LETA+N KAYKR+KRQ LREAR TEKLEKQQ++E ER+RRQKHQEYLN++L H +D + +HR+  GKIQKL KAV  +HAN EREQKKE ERIEKER+RRLMAEDEEGYRKLIDQKKDKRLA+LL QTDEY+  LT++V+QHK  QV K+K+ +KK K  E A          G  LDE+SQMSD+ V V  + +GKI+ G +AP A +LE+WLE NPG+E  PR                                     D DSDD        +   A  I+  AK++    D+  GV          YY +AH ++E + +Q+ ++V G LK+YQ+KGLEWLVSLYNN LNGILADEMGLGKTIQTIALITYLME K+  GP+LIIVPLSTLSNWA EF+KWAP+   VSYKGSPAARR     +R  KFNVL+TTYEY+IKDK +L+KIRWKYMI+DEGHRMKNHHCKLTQ+LNT Y +  RLLLTGTPLQNKLPELWALLNFLLP+IFK+C+TFEQWFNAPFA+TGEKV+LNEEETILIIRRLHKVLRPFLLRRLKK+VE+QLP+KVEY++KC+MS LQR LY HMQ KGV+ TD   K  KGK G K LMNTIMQLRK+CNHP+M+Q IEE++++H+G    IV G D+YR+SGKFEL+DRILPKL+AT H+VL+FCQMT  MTI+EDYF YRGFK+LRLDG TK+EDR  +LK FNE  S+YFIFLLSTRAGGLGLNLQ+ADTV+IFDSDWNPHQDLQAQDRAHRIGQ+NEVRVLRL TVNSVEE+ILAAA++KLN+D+KVIQAG F+ +S+  ERR  LQ+IL  +E++E                                 EE+EVPDDE +NQMIAR E+EF+ F +MDLDRRREEA   P RK RL++  ELP +++ +D + +    EEEEE ++GRGSR +KE +Y+D L++K+WLK I     E     E +EE+++  K+  RK++ D +              +D+ + + +K+ +  A++L        KKM  ++  V++YKD    R LSE F++LPS+KELP+YYE+I++PVD  +I  +I + KY  ++ +EKD +L+C N Q +N +GSLIYEDSIVLQSVFT+ R++++
Sbjct:  327 PPQTQSPG-----------QPAQPAPMVPLHQKQSRITPIQKPRGLDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIGPDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEESGSEEEEEEEEEEQPQAAQPPTLPVEEKKKIPDPDSDDV-------SEVDARHIIENAKQDV---DDEYGVSQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDESRHCSTGSGSASFAHTAPPPAGVNPDLEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMRMDLDRRREEAR-NPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYSDSLTEKQWLKAIEEGTLE-----EIEEEVRQ--KKSSRKRKRDSDAGSSTPTTSTRSRDKDDESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIE 1565          

HSP 2 Score: 87.0409 bits (214), Expect = 1.039e-15
Identity = 73/189 (38.62%), Postives = 88/189 (46.56%), Query Frame = 0

Query:   40 MRPSPSPSPMTGPPNSYPPTQGP---PSD-LQKLQNSINQMEERGMQNDPRYNQARQL------HQNMMSRQGPPPG-----APGAP-------------PGAGPPGGP---AGPPG--------QDKGQ-------FQNPQMLQLRAQIMAYRFLARNQPLPPQIAMAVSGKRP----EGQGPPGAPP 178
            M PSP P P  G P    PTQGP   P D + ++   +  M E+GM +DPRYNQ + +      H  M    GPPP      + G P             P +GP  GP   +GP G        Q  GQ       F   Q+ QLRAQIMAY+ LAR QPLP  + MAV GKRP    + Q P   PP
Sbjct:   43 MGPSPGP-PSAGHPI---PTQGPGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGM----GPPPSPMDQHSQGYPSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQLRAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPP 223          

BLAST of homeotic gene vs. SwissProt
Match: gi|212276472|sp|P51531.2|SMCA2_HUMAN (RecName: Full=Probable global transcription activator SNF2L2; AltName: Full=ATP-dependent helicase SMARCA2; AltName: Full=BRG1-associated factor 190B; Short=BAF190B; AltName: Full=Protein brahma homolog; Short=hBRM; AltName: Full=SNF2-alpha; AltName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2)

HSP 1 Score: 1403.27 bits (3631), Expect = 0.000e+0
Identity = 781/1489 (52.45%), Postives = 986/1489 (66.22%), Query Frame = 0

Query:   40 MRPSPSPSPMTGPPNSYPPTQGPPSDLQKLQNSINQMEERGMQND-------------------PRYNQARQLHQNMMSRQGPPPGAP---------GAP---------PGAGPPGGPAG--PPGQDKGQFQNPQMLQLRAQIMAYRFLARNQPLPPQIAMAVSGK---------------------------------------------------RPEGQGPPGAPPYGPSRPGGPPGSASPGGPPNMQAPAPGGRG--------------------PTPNTTGPTGGTPGVAPTGKPNRVTPVAKPAGIDPITLLQERENRLAARVAHRIDELSNLPVSMADDTRTKAEIELRALRLLNFQRQLRAEVVACTRRDTTLETAINVKAYKRTKRQGLREARATEKLEKQQRLEAERRRRQKHQEYLNAVLTHGRDLQNFHRNNLGKIQKLNKAVLNWHANHEREQKKEQERIEKERLRRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYINQLTDMVKQHKVEQ--------VQKQKELRKKAKLEEQA----GAMLDESSQMSDVRVHVKELSTGKIIRGDNAPLASELESWLEKNPGFEQVPRDEDSD-------------------------DSDGEEKPETTSSAEAILAKAKEEATKE-----DEGDGVDYYTIAHTISEEITEQAPMLVGGKLKEYQVKGLEWLVSLYNNCLNGILADEMGLGKTIQTIALITYLMERKKNMGPYLIIVPLSTLSNWALEFEKWAPACNVVSYKGSPAARRTAQNAMRGSKFNVLVTTYEYVIKDKAMLSKIRWKYMIIDEGHRMKNHHCKLTQILNTFYTSNNRLLLTGTPLQNKLPELWALLNFLLPSIFKACNTFEQWFNAPFAITGEKVELNEEETILIIRRLHKVLRPFLLRRLKKDVESQLPDKVEYIVKCEMSGLQRTLYNHMQEKGVMKTD---KINKGKKGAKALMNTIMQLRKLCNHPFMYQPIEEAYAKHIGMPTDIVTGPDVYRSSGKFELIDRILPKLKATGHRVLMFCQMTQCMTIIEDYFNYRGFKFLRLDGMTKSEDRADMLKIFNEKASDYFIFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARFKLNMDEKVIQAGRFNNRSTGSERRELLQSILRADEEEEEENEVPDDEVINQMIARSEDEFEKFTQMDLDRRREEAALGPNRKDRLIQIKELPEFLLAEDDDDDE---EEEEEIVYGRGSRAKKETNYNDQLSDKEWLKVIGAEDEEFDDDDEDDEEIKKPGKRVKRKKREDEEVEDEFANQNRKKKKSSAK------RLQKKMATLMQIVVQYKDQ------------------DERVLSEPFMKLPSKKELPDYYEVIKRPVDIARIMNKIADGKYEDVDAMEKDFVLMCANTQKYNEDGSLIYEDSIVLQSVFTNARERL 1346
            M PSP P  ++ P  +   T  P   + ++   I+ + ++G+  D                   P  +   Q  Q  MS    P GAP         G P         PGA  PG P     P +    F   Q+ QLRAQI+AY+ LAR QPLP  + +AV GK                                                   RP G GP  +   GPS P   P             PAPGGR                     P P    P   +P +    K +R++P+ KP G+DP+ +LQERE RL AR+AHRI EL NLP S+  D RTKA +EL+ALRLLNFQRQLR EVVAC RRDTTLETA+N KAYKR+KRQ LREAR TEKLEKQQ++E ER+RRQKHQEYLN++L H +D + +HR+  GKIQKL+KAV  WHAN EREQKKE ERIEKER+RRLMAEDEEGYRKLIDQKKD+RLA+LL QTDEY+  LT++V +HK  Q         +++K+  + A+  E A    G  +DESSQMSD+ V V    TGK++ G  AP AS+L++WLE NPG+E  PR +  +                         D + EE  E    A+ I+  AK++   E            YYT+AH ISE + +Q+ +L+ G LK YQ++GLEW+VSLYNN LNGILADEMGLGKTIQTIALITYLME K+  GPYLIIVPLSTLSNW  EF+KWAP+   +SYKG+PA RR+    +R  KFNVL+TTYEY+IKDK +L+KIRWKYMI+DEGHRMKNHHCKLTQ+LNT Y +  R+LLTGTPLQNKLPELWALLNFLLP+IFK+C+TFEQWFNAPFA+TGE+V+LNEEETILIIRRLHKVLRPFLLRRLKK+VESQLP+KVEY++KC+MS LQ+ LY HMQ KG++ TD   K  KGK GAK LMNTIMQLRK+CNHP+M+Q IEE++A+H+G    ++ G ++YR+SGKFEL+DRILPKL+AT HRVL+FCQMT  MTI+EDYF +R F +LRLDG TKSEDRA +LK FNE  S YFIFLLSTRAGGLGLNLQ ADTVVIFDSDWNPHQDLQAQDRAHRIGQ+NEVRVLRL TVNSVEE+ILAAA++KLN+D+KVIQAG F+ +S+  ERR  LQ+IL  +EE EEE+EVPDDE +NQMIAR E+EF+ F +MD+DRRRE+A   P RK RL++  ELP +++ +D + +    EEEEE ++GRGSR +++ +Y+D L++K+WL+ I     E  + +E +EE++   ++ +R   +D   ED    + R+ +  + K      +L K+M  ++  V+ YKD+                    R LSE F++LPS+KELP+YYE+I++PVD  +I  +I + KY  +  +EKD +L+C N Q +N +GS IYEDSIVLQSVF +AR+++
Sbjct:   44 MGPSPGPPSVSHPMPTMGSTDFPQEGMHQMHKPIDGIHDKGIVEDIHCGSMKGTGMRPPHPGMGPPQSPMDQHSQGYMSPHPSPLGAPEHVSSPMSGGGPTPPQMPPSQPGALIPGDPQAMSQPNRGPSPFSPVQLHQLRAQILAYKMLARGQPLPETLQLAVQGKRTLPGLQQQQQQQQQQQQQQQQQQQQQQQPQQQPPQPQTQQQQQPALVNYNRPSGPGPELS---GPSTPQKLP------------VPAPGGRPSPAPPAAAQPPAAAVPGPSVPQP---APGQPSPVLQLQQKQSRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELENLPGSLPPDLRTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHANTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVWEHKQAQAAKEKKKRRRRKKKAEENAEGGESALGPDGEPIDESSQMSDLPVKVTHTETGKVLFGPEAPKASQLDAWLEMNPGYEVAPRSDSEESDSDYEEEDEEEESSRQETEEKILLDPNSEEVSE--KDAKQIIETAKQDVDDEYSMQYSARGSQSYYTVAHAISERVEKQSALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDRRREDAR-NPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQWLRAI-----EDGNLEEMEEEVRLKKRKRRRNVDKDPAKEDVEKAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVINYKDRCNVEKVPSNSQLEIEGNSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKI 1506          

BLAST of homeotic gene vs. SwissProt
Match: gi|123790047|sp|Q3TKT4.1|SMCA4_MOUSE (RecName: Full=Transcription activator BRG1; AltName: Full=ATP-dependent helicase SMARCA4; AltName: Full=BRG1-associated factor 190A; Short=BAF190A; AltName: Full=Protein brahma homolog 1; AltName: Full=SNF2-beta; AltName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 4)

HSP 1 Score: 1398.65 bits (3619), Expect = 0.000e+0
Identity = 740/1234 (59.97%), Postives = 916/1234 (74.23%), Query Frame = 0

Query:  196 PPNMQAPAPGGRGPTPNTTGPTGGTPGVAPTGKPNRVTPVAKPAGIDPITLLQERENRLAARVAHRIDELSNLPVSMADDTRTKAEIELRALRLLNFQRQLRAEVVACTRRDTTLETAINVKAYKRTKRQGLREARATEKLEKQQRLEAERRRRQKHQEYLNAVLTHGRDLQNFHRNNLGKIQKLNKAVLNWHANHEREQKKEQERIEKERLRRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYINQLTDMVKQHKVEQVQKQKELRKKAKLEEQA----------GAMLDESSQMSDVRVHVKELSTGKIIRGDNAPLASELESWLEKNPGFEQVPR-------------------------------------DEDSDDSDGEEKPETTSSAEAILAKAKEEATKEDEGDGVD---------YYTIAHTISEEITEQAPMLVGGKLKEYQVKGLEWLVSLYNNCLNGILADEMGLGKTIQTIALITYLMERKKNMGPYLIIVPLSTLSNWALEFEKWAPACNVVSYKGSPAARRTAQNAMRGSKFNVLVTTYEYVIKDKAMLSKIRWKYMIIDEGHRMKNHHCKLTQILNTFYTSNNRLLLTGTPLQNKLPELWALLNFLLPSIFKACNTFEQWFNAPFAITGEKVELNEEETILIIRRLHKVLRPFLLRRLKKDVESQLPDKVEYIVKCEMSGLQRTLYNHMQEKGVMKTD---KINKGKKGAKALMNTIMQLRKLCNHPFMYQPIEEAYAKHIGMPTDIVTGPDVYRSSGKFELIDRILPKLKATGHRVLMFCQMTQCMTIIEDYFNYRGFKFLRLDGMTKSEDRADMLKIFNEKASDYFIFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARFKLNMDEKVIQAGRFNNRSTGSERRELLQSILRADEEEEEENEVPDDEVINQMIARSEDEFEKFTQMDLDRRREEAALGPNRKDRLIQIKELPEFLLAEDDDDDE---EEEEEIVYGRGSRAKKETNYNDQLSDKEWLKVIGAEDEEFDDDDEDDEEIKKPGKRVKRKKREDEEV-------------EDEFANQNRKKKKSSAKRLQ-------KKMATLMQIVVQYKDQDERVLSEPFMKLPSKKELPDYYEVIKRPVDIARIMNKIADGKYEDVDAMEKDFVLMCANTQKYNEDGSLIYEDSIVLQSVFTNARERLD 1347
            PP  Q+P             P    P V    K +R+TP+ KP G+DP+ +LQERE RL AR+AHRI EL NLP S+A D RTKA IEL+ALRLLNFQRQLR EVV C RRDT LETA+N KAYKR+KRQ LREAR TEKLEKQQ++E ER+RRQKHQEYLN++L H +D + +HR+  GK+QKL KAV  +HAN EREQKKE ERIEKER+RRLMAEDEEGYRKLIDQKKDKRLA+LL QTDEY+  LT++V+QHK  QV K+K+ +KK K  E A          G  LDE+SQMSD+ V V  + +GKI+ G +AP A +LE+WLE NPG+E  PR                                     D DSDD        +   A  I+  AK++    D+  GV          YY +AH ++E + +Q+ ++V G LK+YQ+KGLEWLVSLYNN LNGILADEMGLGKTIQTIALITYLME K+  GP+LIIVPLSTLSNWA EF+KWAP+   VSYKGSPAARR     +R  KFNVL+TTYEY+IKDK +L+KIRWKYMI+DEGHRMKNHHCKLTQ+LNT Y +  RLLLTGTPLQNKLPELWALLNFLLP+IFK+C+TFEQWFNAPFA+TGEKV+LNEEETILIIRRLHKVLRPFLLRRLKK+VE+QLP+KVEY++KC+MS LQR LY HMQ KGV+ TD   K  KGK G K LMNTIMQLRK+CNHP+M+Q IEE++++H+G    IV G D+YR+SGKFEL+DRILPKL+AT H+VL+FCQMT  MTI+EDYF YRGFK+LRLDG TK+EDR  +LK FNE  S+YFIFLLSTRAGGLGLNLQ+ADTV+IFDSDWNPHQDLQAQDRAHRIGQ+NEVRVLRL TVNSVEE+ILAAA++KLN+D+KVIQAG F+ +S+  ERR  LQ+IL  +E++EEE+EVPDDE +NQMIAR E+EF+ F +MDLDRRREEA   P RK RL++  ELP +++ +D + +    EEEEE ++GRGSR +KE +Y+D L++K+WLK I     E     E +EE+++  K+  RK++ D E              +DE + + +K+ +  A++L        KKM  ++  V++YKD   R LSE F++LPS+KELP+YYE+I++PVD  +I  +I + KY  ++ +EKD +L+C N Q +N +GSLIYEDSIVLQSVFT+ R++++
Sbjct:  327 PPQTQSPG-----------QPAQPAPLVPLHQKQSRITPIQKPRGLDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFREYHRSVTGKLQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIGPDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEESGSEEEEEEEEEEQPQPAQPPTLPVEEKKKIPDPDSDDV-------SEVDARHIIENAKQDV---DDEYGVSQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDEEEDEVPDDETVNQMIARHEEEFDLFMRMDLDRRREEAR-NPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYSDSLTEKQWLKAIEEGTLE-----EIEEEVRQ--KKSSRKRKRDSEAGSSTPTTSTRSRDKDEESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIE 1531          

HSP 2 Score: 85.8853 bits (211), Expect = 2.207e-15
Identity = 71/185 (38.38%), Postives = 87/185 (47.03%), Query Frame = 0

Query:   40 MRPSPSPSPMTGPPNSYPPTQGP---PSD-LQKLQNSINQMEERGMQNDPRYNQARQLHQNMMSRQG--PPPG-----APGAP-------------PGAGPPGGP---AGPPG--------QDKGQ-------FQNPQMLQLRAQIMAYRFLARNQPLPPQIAMAVSGKRP----EGQGPPGAPP 178
            M PSP P P  G P    PTQGP   P D + ++   +  M E+GM +DPRYNQ + +     +  G  PPP      + G P             P +GP  GP   +GP G        Q  GQ       F   Q+ QLRAQIMAY+ LAR QPLP  + MAV GKRP    + Q P   PP
Sbjct:   43 MGPSPGP-PSAGHPM---PTQGPGGYPQDNMHQMHKPMESMHEKGMPDDPRYNQMKGMGMRSGAHTGMAPPPSPMDQHSQGYPSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGSDPQALGQQNRGPTPFNQNQLHQLRAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPP 223          

BLAST of homeotic gene vs. SwissProt
Match: gi|81914599|sp|Q8K1P7.1|SMCA4_RAT (RecName: Full=Transcription activator BRG1; AltName: Full=ATP-dependent helicase SMARCA4; AltName: Full=BRG1-associated factor 190A; Short=BAF190A; AltName: Full=Protein brahma homolog 1; AltName: Full=SNF2-beta; AltName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 4)

HSP 1 Score: 1396.33 bits (3613), Expect = 0.000e+0
Identity = 739/1234 (59.89%), Postives = 915/1234 (74.15%), Query Frame = 0

Query:  196 PPNMQAPAPGGRGPTPNTTGPTGGTPGVAPTGKPNRVTPVAKPAGIDPITLLQERENRLAARVAHRIDELSNLPVSMADDTRTKAEIELRALRLLNFQRQLRAEVVACTRRDTTLETAINVKAYKRTKRQGLREARATEKLEKQQRLEAERRRRQKHQEYLNAVLTHGRDLQNFHRNNLGKIQKLNKAVLNWHANHEREQKKEQERIEKERLRRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYINQLTDMVKQHKVEQVQKQKELRKKAKLEEQA----------GAMLDESSQMSDVRVHVKELSTGKIIRGDNAPLASELESWLEKNPGFEQVPR-------------------------------------DEDSDDSDGEEKPETTSSAEAILAKAKEEATKEDEGDGVD---------YYTIAHTISEEITEQAPMLVGGKLKEYQVKGLEWLVSLYNNCLNGILADEMGLGKTIQTIALITYLMERKKNMGPYLIIVPLSTLSNWALEFEKWAPACNVVSYKGSPAARRTAQNAMRGSKFNVLVTTYEYVIKDKAMLSKIRWKYMIIDEGHRMKNHHCKLTQILNTFYTSNNRLLLTGTPLQNKLPELWALLNFLLPSIFKACNTFEQWFNAPFAITGEKVELNEEETILIIRRLHKVLRPFLLRRLKKDVESQLPDKVEYIVKCEMSGLQRTLYNHMQEKGVMKTD---KINKGKKGAKALMNTIMQLRKLCNHPFMYQPIEEAYAKHIGMPTDIVTGPDVYRSSGKFELIDRILPKLKATGHRVLMFCQMTQCMTIIEDYFNYRGFKFLRLDGMTKSEDRADMLKIFNEKASDYFIFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARFKLNMDEKVIQAGRFNNRSTGSERRELLQSILRADEEEEEENEVPDDEVINQMIARSEDEFEKFTQMDLDRRREEAALGPNRKDRLIQIKELPEFLLAEDDDDDE---EEEEEIVYGRGSRAKKETNYNDQLSDKEWLKVIGAEDEEFDDDDEDDEEIKKPGKRVKRKKREDEEV-------------EDEFANQNRKKKKSSAKRLQ-------KKMATLMQIVVQYKDQDERVLSEPFMKLPSKKELPDYYEVIKRPVDIARIMNKIADGKYEDVDAMEKDFVLMCANTQKYNEDGSLIYEDSIVLQSVFTNARERLD 1347
            PP  Q+P             P    P V    K +R+TP+ KP G+DP+ +LQERE RL AR+ HRI EL NLP S+A D RTKA IEL+ALRLLNFQRQLR EVV C RRDT LETA+N KAYKR+KRQ LREAR TEKLEKQQ++E ER+RRQKHQEYLN++L H +D + +HR+  GK+QKL KAV  +HAN EREQKKE ERIEKER+RRLMAEDEEGYRKLIDQKKDKRLA+LL QTDEY+  LT++V+QHK  QV K+K+ +KK K  E A          G  LDE+SQMSD+ V V  + +GKI+ G +AP A +LE+WLE NPG+E  PR                                     D DSDD        +   A  I+  AK++    D+  GV          YY +AH ++E + +Q+ ++V G LK+YQ+KGLEWLVSLYNN LNGILADEMGLGKTIQTIALITYLME K+  GP+LIIVPLSTLSNWA EF+KWAP+   VSYKGSPAARR     +R  KFNVL+TTYEY+IKDK +L+KIRWKYMI+DEGHRMKNHHCKLTQ+LNT Y +  RLLLTGTPLQNKLPELWALLNFLLP+IFK+C+TFEQWFNAPFA+TGEKV+LNEEETILIIRRLHKVLRPFLLRRLKK+VE+QLP+KVEY++KC+MS LQR LY HMQ KGV+ TD   K  KGK G K LMNTIMQLRK+CNHP+M+Q IEE++++H+G    IV G D+YR+SGKFEL+DRILPKL+AT H+VL+FCQMT  MTI+EDYF YRGFK+LRLDG TK+EDR  +LK FNE  S+YFIFLLSTRAGGLGLNLQ+ADTV+IFDSDWNPHQDLQAQDRAHRIGQ+NEVRVLRL TVNSVEE+ILAAA++KLN+D+KVIQAG F+ +S+  ERR  LQ+IL  +E++EEE+EVPDDE +NQMIAR E+EF+ F +MDLDRRREEA   P RK RL++  ELP +++ +D + +    EEEEE ++GRGSR +KE +Y+D L++K+WLK I     E     E +EE+++  K+  RK++ D E              +DE + + +K+ +  A++L        KKM  ++  V++YKD   R LSE F++LPS+KELP+YYE+I++PVD  +I  +I + KY  ++ +EKD +L+C N Q +N +GSLIYEDSIVLQSVFT+ R++++
Sbjct:  327 PPQTQSPG-----------QPAQPAPLVPLHQKQSRITPIQKPRGLDPVEILQEREYRLQARIVHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFREYHRSVTGKLQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIGPDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEESGSEEEEEEEEEEQPQPAQPPTLPVEEKKKIPDPDSDDV-------SEVDARHIIENAKQDV---DDEYGVSQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDEEEDEVPDDETVNQMIARHEEEFDLFMRMDLDRRREEAR-NPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYSDSLTEKQWLKAIEEGTLE-----EIEEEVRQ--KKSSRKRKRDSEAGSSTPTTSTRSRDKDEESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIE 1531          

HSP 2 Score: 86.6557 bits (213), Expect = 1.212e-15
Identity = 73/189 (38.62%), Postives = 88/189 (46.56%), Query Frame = 0

Query:   40 MRPSPSPSPMTGPPNSYPPTQGP---PSD-LQKLQNSINQMEERGMQNDPRYNQARQL------HQNMMSRQGPPPG-----APGAP-------------PGAGPPGGP---AGPPG--------QDKGQ-------FQNPQMLQLRAQIMAYRFLARNQPLPPQIAMAVSGKRP----EGQGPPGAPP 178
            M PSP P P  G P    PTQGP   P D + ++   +  M E+GM +DPRYNQ + +      H  M    GPPP      + G P             P +GP  GP   +GP G        Q  GQ       F   Q+ QLRAQIMAY+ LAR QPLP  + MAV GKRP    + Q P   PP
Sbjct:   43 MGPSPGP-PSAGHPM---PTQGPGGYPQDNMHQMHKPMESMHEKGMPDDPRYNQMKGMGMRSGAHTGM----GPPPSPMDQHSQGYPSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGSDPQALGQQNRGPTPFNQNQLHQLRAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPP 223          

BLAST of homeotic gene vs. SwissProt
Match: gi|288559138|sp|A7Z019.1|SMCA4_BOVIN (RecName: Full=Transcription activator BRG1; AltName: Full=ATP-dependent helicase SMARCA4; AltName: Full=BRG1-associated factor 190A; Short=BAF190A; AltName: Full=Protein brahma homolog 1; AltName: Full=SNF2-beta; AltName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 4)

HSP 1 Score: 1394.79 bits (3609), Expect = 0.000e+0
Identity = 739/1235 (59.84%), Postives = 916/1235 (74.17%), Query Frame = 0

Query:  196 PPNMQAPAPGGRGPTPNTTGPTGGTPGVAPTGKPNRVTPVAKPAGIDPITLLQERENRLAARVAHRIDELSNLPVSMADDTRTKAEIELRALRLLNFQRQLRAEVVACTRRDTTLETAINVKAYKRTKRQGLREARATEKLEKQQRLEAERRRRQKHQEYLNAVLTHGRDLQNFHRNNLGKIQKLNKAVLNWHANHEREQKKEQERIEKERLRRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYINQLTDMVKQHKVEQVQKQKELRKKAKLEEQA----------GAMLDESSQMSDVRVHVKELSTGKIIRGDNAPLASELESWLEKNPGFEQVPR-------------------------------------DEDSDDSDGEEKPETTSSAEAILAKAKEEATKEDEGDGVD---------YYTIAHTISEEITEQAPMLVGGKLKEYQVKGLEWLVSLYNNCLNGILADEMGLGKTIQTIALITYLMERKKNMGPYLIIVPLSTLSNWALEFEKWAPACNVVSYKGSPAARRTAQNAMRGSKFNVLVTTYEYVIKDKAMLSKIRWKYMIIDEGHRMKNHHCKLTQILNTFYTSNNRLLLTGTPLQNKLPELWALLNFLLPSIFKACNTFEQWFNAPFAITGEKVELNEEETILIIRRLHKVLRPFLLRRLKKDVESQLPDKVEYIVKCEMSGLQRTLYNHMQEKGVMKTD---KINKGKKGAKALMNTIMQLRKLCNHPFMYQPIEEAYAKHIGMPTDIVTGPDVYRSSGKFELIDRILPKLKATGHRVLMFCQMTQCMTIIEDYFNYRGFKFLRLDGMTKSEDRADMLKIFNEKASDYFIFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARFKLNMDEKVIQAGRFNNRSTGSERRELLQSILRADEEEEEENEVPDDEVINQMIARSEDEFEKFTQMDLDRRREEAALGPNRKDRLIQIKELPEFLLAEDDDDDE---EEEEEIVYGRGSRAKKETNYNDQLSDKEWLKVIGAEDEEFDDDDEDDEEIKKPGKRVKRKKREDEEV-------------EDEFANQNRKKKKSSAKRLQ-------KKMATLMQIVVQYKDQDE-RVLSEPFMKLPSKKELPDYYEVIKRPVDIARIMNKIADGKYEDVDAMEKDFVLMCANTQKYNEDGSLIYEDSIVLQSVFTNARERLD 1347
            PP  Q+P             P    P V    K +R+TP+ KP G+DP+ +LQERE RL AR+AHRI EL NLP S+A D RTKA IEL+ALRLLNFQRQLR EVV C RRDT LETA+N KAYKR+KRQ LREAR TEKLEKQQ++E ER+RRQKHQEYLN++L H +D + +HR+  GKIQKL KAV  +HAN EREQKKE ERIEKER+RRLMAEDEEGYRKLIDQKKDKRLA+LL QTDEY+  LT++V+QHK  QV K+K+ +KK K  E A          G  LDE+SQMSD+ V V  + +GKI+ G +AP A +LE+WLE NPG+E  PR                                     D DSDD        +   A  I+  AK++    D+  GV          YY +AH ++E + +Q+ ++V G LK+YQ+KGLEWLVSLYNN LNGILADEMGLGKTIQTIALITYLME K+  GP+LIIVPLSTLSNWA EF+KWAP+   VSYKGSPAARR     +R  KFNVL+TTYEY+IKDK +L+KIRWKYMI+DEGHRMKNHHCKLTQ+LNT Y +  RLLLTGTPLQNKLPELWALLNFLLP+IFK+C+TFEQWFNAPFA+TGEKV+LNEEETILIIRRLHKVLRPFLLRRLKK+VE+QLP+KVEY++KC+MS LQR LY HMQ KGV+ TD   K  KGK G K LMNTIMQLRK+CNHP+M+Q IEE++++H+G    IV G D+YR+SGKFEL+DRILPKL+AT H+VL+FCQMT  MTI+EDYF YRGFK+LRLDG TK+EDR  +LK FNE  S+YFIFLLSTRAGGLGLNLQ+ADTV+IFDSDWNPHQDLQAQDRAHRIGQ+NEVRVLRL TVNSVEE+ILAAA++KLN+D+KVIQAG F+ +S+  ERR  LQ+IL  +E++EEE+EVPDDE +NQMIAR E+EF+ F +MDLDRRREEA   P RK RL++  ELP +++ +D + +    EEEEE ++GRGSR +KE +Y+D L++K+WLK I     E     E +EE+++  K+  RK++ D +              +D+ + + +K+ +  A++L        KKM  ++  V++YKD    R LSE F++LPS+KELP+YYE+I++PVD  +I  +I + KY  ++ +EKD +L+C N Q +N +GSLIYEDSIVLQSVFT+ R++++
Sbjct:  319 PPQTQSPG-----------QPAQPAPMVPLHQKQSRITPIQKPRGLDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIGPDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEESGSEEEEEEEEEEQPQPAQPPTLPVEEKKKIPDPDSDDV-------SEVDARHIIENAKQDV---DDEYGVSQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDEEEDEVPDDETVNQMIARHEEEFDLFMRMDLDRRREEAR-NPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYSDSLTEKQWLKAIEEGTLE-----EIEEEVRQ--KKSSRKRKRDSDAGPSTPTTSTRSRDKDDESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIE 1524          

BLAST of homeotic gene vs. SwissProt
Match: gi|81884744|sp|Q6DIC0.1|SMCA2_MOUSE (RecName: Full=Probable global transcription activator SNF2L2; AltName: Full=ATP-dependent helicase SMARCA2; AltName: Full=BRG1-associated factor 190B; Short=BAF190B; AltName: Full=Protein brahma homolog; AltName: Full=SNF2-alpha; AltName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2)

HSP 1 Score: 1391.33 bits (3600), Expect = 0.000e+0
Identity = 729/1257 (58.00%), Postives = 925/1257 (73.59%), Query Frame = 0

Query:  148 FLARNQPLPPQIAMAVSGK----RPEGQGPPGAPPYGPSRPGGPPGSASPGGPPNMQAPAPGGRGPTPNTTGPTGGTPGVAPTGKPNRVTPVAKPAGIDPITLLQERENRLAARVAHRIDELSNLPVSMADDTRTKAEIELRALRLLNFQRQLRAEVVACTRRDTTLETAINVKAYKRTKRQGLREARATEKLEKQQRLEAERRRRQKHQEYLNAVLTHGRDLQNFHRNNLGKIQKLNKAVLNWHANHEREQKKEQERIEKERLRRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYINQLTDMVKQHKVEQVQKQKELRKKAKLEEQA------------GAMLDESSQMSDVRVHVKELSTGKIIRGDNAPLASELESWLEKNPGFEQVPRDEDSD-------------------------DSDGEEKPETTSSAEAILAKAKEEATKE-----DEGDGVDYYTIAHTISEEITEQAPMLVGGKLKEYQVKGLEWLVSLYNNCLNGILADEMGLGKTIQTIALITYLMERKKNMGPYLIIVPLSTLSNWALEFEKWAPACNVVSYKGSPAARRTAQNAMRGSKFNVLVTTYEYVIKDKAMLSKIRWKYMIIDEGHRMKNHHCKLTQILNTFYTSNNRLLLTGTPLQNKLPELWALLNFLLPSIFKACNTFEQWFNAPFAITGEKVELNEEETILIIRRLHKVLRPFLLRRLKKDVESQLPDKVEYIVKCEMSGLQRTLYNHMQEKGVMKTD---KINKGKKGAKALMNTIMQLRKLCNHPFMYQPIEEAYAKHIGMPTDIVTGPDVYRSSGKFELIDRILPKLKATGHRVLMFCQMTQCMTIIEDYFNYRGFKFLRLDGMTKSEDRADMLKIFNEKASDYFIFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARFKLNMDEKVIQAGRFNNRSTGSERRELLQSILRADEEEEEENEVPDDEVINQMIARSEDEFEKFTQMDLDRRREEAALGPNRKDRLIQIKELPEFLLAEDDDDDE---EEEEEIVYGRGSRAKKETNYNDQLSDKEWLKVIGAEDEEFDDDDEDDEEIKKPGKRVKRKKREDEEVEDEFANQNRKKKKSSAK------RLQKKMATLMQIVVQYKDQDERVLSEPFMKLPSKKELPDYYEVIKRPVDIARIMNKIADGKYEDVDAMEKDFVLMCANTQKYNEDGSLIYEDSIVLQSVFTNARERL 1346
             ++ N+P  P   + +SG+    +     P G P   P     P  +A PG  P++Q PAPG   P             +    K +R++P+ KP G+DP+ +LQERE RL AR+AHRI EL +LP S+  D RTKA +EL+ALRLLNFQRQLR EVVAC RRDTTLETA+N KAYKR+KRQ LREAR TEKLEKQQ++E ER+RRQKHQEYLN++L H +D + +HR+  GKIQKL+KAV  WHAN EREQKKE ERIEKER+RRLMAEDEEGYRKLIDQKKD+RLA+LL QTDEY+  LT++V +HK  Q  K+K+ R++ K + +             G  +DESSQMSD+ V V    TGK++ G  AP AS+L++WLE NPG+E  PR +  +                         D + EE  E    A+ I+  AK++   E            YYT+AH ISE + +Q+ +L+ G LK YQ++GLEW+VSLYNN LNGILADEMGLGKTIQTIALITYLME K+  GPYLIIVPLSTLSNW  EF+KWAP+   +SYKG+PA RR+    +R  KFNVL+TTYEY+IKDK +L+KIRWKYMI+DEGHRMKNHHCKLTQ+LNT Y +  R+LLTGTPLQNKLPELWALLNFLLP+IFK+C+TFEQWFNAPFA+TGE+V+LNEEETILIIRRLHKVLRPFLLRRLKK+VESQLP+KVEY++KC+MS LQ+ LY HMQ KG++ TD   K  KGK GAK LMNTIMQLRK+CNHP+M+Q IEE++A+H+G    ++ G ++YR+SGKFEL+DRILPKL+AT HRVL+FCQMT  MTI+EDYF +R F +LRLDG TKSEDRA +LK FNE  S YFIFLLSTRAGGLGLNLQ ADTVVIFDSDWNPHQDLQAQDRAHRIGQ+NEVRVLRL TVNSVEE+ILAAA++KLN+D+KVIQAG F+ +S+  ERR  LQ+IL  +EE EEE+EVPDDE +NQMIAR E+EF+ F +MD+DRRRE+A   P RK RL++  ELP +++ +D + +    EEEEE ++GRGSR +++ +Y+D L++K+WL+ I     E  + +E +EE++   ++ +R   +D   ED    + R+ +  + K      +L K+M  ++  V+ YKD   R LSE F++LPS+K+LP+YYE+I++PVD  +I  +I + KY  +  +EKD +L+C N Q +N +GS IYEDSIVLQSVF +AR+++
Sbjct:  259 LVSYNRPSGPGQELLLSGQSAPQKLSAPAPSGRPSPAPQAAVQPTATAVPG--PSVQQPAPGQPSPV------------LQLQQKQSRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELESLPGSLPPDLRTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHANTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVWEHKQAQAAKEKKKRRRRKKKAEENAEGGEPALGPDGEPIDESSQMSDLPVKVTHTETGKVLFGPEAPKASQLDAWLEMNPGYEVAPRSDSEESESDYEEEDEEEESSRQETEEKILLDPNSEEVSE--KDAKQIIETAKQDVDDEYSMQYSARGSQSYYTVAHAISERVEKQSALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDRRREDAR-NPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQWLRAI-----EDGNLEEMEEEVRLKKRKRRRNVDKDPVKEDVEKAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVINYKDSSGRQLSEVFIQLPSRKDLPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKI 1493          

HSP 2 Score: 60.077 bits (144), Expect = 1.644e-7
Identity = 47/161 (29.19%), Postives = 66/161 (40.99%), Query Frame = 0

Query:   40 MRPSPSPSPMTGPPNSYPPTQGPPSDLQKLQNSINQMEERGMQNDPRY-----NQARQLHQNMMSRQGP--------------------------PPGAPGAPPGAGPPGGPAG--PPGQDKGQFQNPQMLQLRAQIMAYRFLARNQPLPPQIAMAVSGKR 167
            M PSP P  ++ P ++      P   + +L   ++ + ++G+  D           R  H  M   Q P                          PP  P + PGA  PG P     P +    F   Q+ QLRAQI+AY+ LAR QPLP  + +AV GKR
Sbjct:   44 MGPSPGPPSVSHPLSTMGSADFPQEGMHQLHKPMDGIHDKGIVEDVHCGSMKGTSMRPPHPGMGPPQSPMDQHSQGYMSPHPSPLGAPEHVSSPTPPQMPPSQPGALIPGDPQAMNQPNRGPSPFSPVQLHQLRAQILAYKMLARGQPLPETLQLAVQGKR 204          

BLAST of homeotic gene vs. SwissProt
Match: gi|46397098|sp|O94421.2|SNF22_SCHPO (RecName: Full=SWI/SNF chromatin-remodeling complex subunit snf22; AltName: Full=ATP-dependent helicase snf22; AltName: Full=SWI/SNF complex subunit snf22)

HSP 1 Score: 822.772 bits (2124), Expect = 0.000e+0
Identity = 473/1141 (41.45%), Postives = 669/1141 (58.63%), Query Frame = 0

Query:  232 VTPVAKPAGIDPITLLQERENRLAARVAHRIDELS--NLPVS----MADDTRTKAEIELRALRLLNFQRQLRAEVVACTRRDTTLETAINVKAYKRTKRQGLREARATEKLEKQQRLEAERRRRQKHQEYLNAVLTHGRDLQNFHRNNLGKIQKLNKAVLNWHANHEREQKKEQERIEKERLRRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYINQLTDMVKQHKVEQVQKQKELRKKAKLEEQAGAMLDESSQMSDVRVHVKELSTGKIIRGDNAPLASELESWLEKNPGFEQVPRDEDSDDSDGEEKPETTSSAEAILAKAKEEATKEDEGDGVDYYTIAHTISEEITEQAPMLVGGKLKEYQVKGLEWLVSLYNNCLNGILADEMGLGKTIQTIALITYLMERKKNMGPYLIIVPLSTLSNWALEFEKWAPACNVVSYKGSPAARRTAQNAMRGSKFNVLVTTYEYVIKDKAMLSKIRWKYMIIDEGHRMKNHHCKLTQILNTFYTSNNRLLLTGTPLQNKLPELWALLNFLLPSIFKACNTFEQWFNAPFAITG--EKVELNEEETILIIRRLHKVLRPFLLRRLKKDVESQLPDKVEYIVKCEMSGLQRTLYNHMQEKGVMKTDKINKGKKGAKALMNTIMQLRKLCNHPFMYQPIEEAYAKHIGMPTDIVTGPDVYRSSGKFELIDRILPKLKATGHRVLMFCQMTQCMTIIEDYFNYRGFKFLRLDGMTKSEDRADMLKIFNEKASDYFIFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARFKLNMDEKVIQAGRFNNRSTGSERRELLQSILRADEEEEEE---NEVPDDEVINQMIARSEDEFEKFTQMDLDRRREEAALGPNRKDRLIQIKELPEFLLAEDDD---DDEEEEEEIVYGRGSRAKKETNYNDQLSDKEWLKVIGAEDEEFDDDDEDDEEIKKPGKRVKRKKREDE--------EVEDEFANQNRKKKKS-SAKRLQKKMATLMQIVVQYKDQDERVLSEPFMKLPSKKELPDYYEVIKRPVDIARIMNKIADGKYEDVDAMEKDFVLMCANTQKYNEDGSLIYEDSIVLQSVFTNARERLDAD 1349
            + P   P  I    +    E  +A  +A+RID L   N P S    +    ++K+ IELR LRLL  QR LR  + +      +L        ++  KRQ ++EA     L ++Q+ E   R+++K       +LTH                                            LR +M      +RK I  K DK       Q      +  D++  H   + +++K + + A+   QA    DE++       +++ L   K  R  +  L  + + +LE      +  R + S+   G    + ++SAE        EA   +E   +DY+ +AH I EE+ EQ  + VGG LK+YQ+KGLEW++SLYNN LNGILADEMGLGKTIQTIA ITYL+E+K   GP+LIIVPLSTL+NW +EFEKWAP+   ++YKG P  R+T Q+ +R S FNVL+TT+EY+IKD+ +LS+I+W +MIIDEGHR+KN   KLT  L+T+Y S  RL+LTGTPLQN LPELWALLNF+LP IF +  +F++WFN PFA TG  +K+ LNEEE +LII+RLHKVLRPFL RRLKKDVE +LPDKVE ++KC +SGLQ  LY  M++ G++  D   KGK G K L NT+MQL+K+CNHPF+++ +E A     G   D+     ++R++GKFEL+DRILPKL  TGH+ LMF QMTQ MTI+EDY   + +K+LRLDG TKS+DR  +L  FN+  SD +IF+LSTRAGGLGLNLQTADTV+IFD+DWNPHQDLQAQDRAHRIGQ  EVR+LRL+T  S+EE IL+ A++KL++D KVIQAG+F+N+ST  ER   L+S+L  D +++ +    E+ DDE +N++I+R+++E   F ++D +R   +        +RL+ + ELP+F   E D        E E+    R  R +   +Y +   D            E +  D D      P KR + +K+ +           E   A   RK   S   K L++    + + +   + +D R ++  F+  P++K  PDYY +IKRP+ + +I   I + +Y DV  +  DF+LM  N   YNE+ S++YED+ +++       E L+ +
Sbjct:  590 LIPSLLPPSISWDDVFLSSEIAIACSIANRIDFLEKENRPKSVNKKILQQDKSKSMIELRCLRLLEKQRSLRETINSVIPHSDSLAAGNLRLMFRNVKRQTMQEANLVLALAEKQKTEHAMRQKEK-------LLTH--------------------------------------------LRSIML-----HRKSIVTKVDK-------QNKAKTQRCKDIINFHAHLEKEEKKRIERSARQRLQALRADDEAA-------YLQLLDKAKDTRITH--LLKQTDQYLE---NLTRAVRIQQSNIHSGNTSGKGSNSAEL-------EAPISEEDKNLDYFKVAHRIHEEV-EQPKIFVGGTLKDYQLKGLEWMLSLYNNNLNGILADEMGLGKTIQTIAFITYLIEKKNQQGPFLIIVPLSTLTNWIMEFEKWAPSVKKIAYKGPPQLRKTLQSQIRSSNFNVLLTTFEYIIKDRPLLSRIKWVHMIIDEGHRIKNTQSKLTSTLSTYYHSQYRLILTGTPLQNNLPELWALLNFVLPKIFNSIKSFDEWFNTPFANTGGQDKIGLNEEEALLIIKRLHKVLRPFLFRRLKKDVEKELPDKVEKVIKCPLSGLQLKLYQQMKKHGMLFVDG-EKGKTGIKGLQNTVMQLKKICNHPFIFEDVERAIDPS-GTNVDL-----LWRAAGKFELLDRILPKLFLTGHKTLMFFQMTQIMTIMEDYLRSKNWKYLRLDGSTKSDDRCSLLAQFNDPKSDVYIFMLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQTKEVRILRLITEKSIEENILSRAQYKLDLDGKVIQAGKFDNKSTPEEREAFLRSLLEHDGDDDHDLTYGELQDDE-LNELISRTDEELVLFKKLDKERAATDIYGKGKPLERLLTVNELPDFYKVEVDSFAVQSSSELEDQYLERKRRRRNSISYTELTLD------------ELNTVD-DPSSTLMPRKRGRPRKKTNSGSSLSTPLSQESSLARSGRKNTPSYKQKALRRYCMEIFERLYNLQSEDGRFVNGLFLYPPNRKLYPDYYIIIKRPIALGKIKRNIKNDRYGDVGELIADFMLMFNNAYTYNEEHSIVYEDAKLMEKTLKEVIEDLEKN 1626          

BLAST of homeotic gene vs. SwissProt
Match: gi|46397295|sp|Q9UTN6.1|SNF21_SCHPO (RecName: Full=Chromatin structure-remodeling complex subunit snf21; AltName: Full=ATP-dependent helicase snf21; AltName: Full=RSC complex subunit snf21)

HSP 1 Score: 815.068 bits (2104), Expect = 0.000e+0
Identity = 414/803 (51.56%), Postives = 564/803 (70.24%), Query Frame = 0

Query:  563 VDYYTIAHTISEEITEQAPMLVGGKLKEYQVKGLEWLVSLYNNCLNGILADEMGLGKTIQTIALITYLMERKKNMGPYLIIVPLSTLSNWALEFEKWAPACNVVSYKGSPAARRTAQNAMRGSKFNVLVTTYEYVIKDKAMLSKIRWKYMIIDEGHRMKNHHCKLTQILNTFYTSNNRLLLTGTPLQNKLPELWALLNFLLPSIFKACNTFEQWFNAPFAITG--EKVELNEEETILIIRRLHKVLRPFLLRRLKKDVESQLPDKVEYIVKCEMSGLQRTLYNHMQEKGVMKTDKINKGKKGAKALMNTIMQLRKLCNHPFMYQPIEEAYAKHIGMPTDIVTGPDVYRSSGKFELIDRILPKLKATGHRVLMFCQMTQCMTIIEDYFNYRGFKFLRLDGMTKSEDRADMLKIFNEKASDYFIFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARFKLNMDEKVIQAGRFNNRSTGSERRELLQSIL---RADEEEEEENEVPDDEVINQMIARSEDEFEKFTQMDLDRRREEAALGPNR-KDRLIQIKELPEFLLAEDDDDDEEEEEEIVYGRGSRAKKETNYNDQLSDKEWLKVIGAEDEEFDDDDEDDEEIKKPGK-RVKRKKREDEEVEDEFANQNRKKKKSSA---------KRLQKKMATLMQIVVQYKDQDERVLSEPFMKLPSKKELPDYYEVIKRPVDIARIMNKIADGKYEDVDAMEKDFVLMCANTQKYNEDGSLIYEDSIVLQSVFTNARERLDAD 1349
            +DYY +AH I E +TEQ  +LVGGKLKEYQ++GL+W++SLYNN LNGILADEMGLGKTIQTI+LIT+L+E+K+  GP+L+IVPLSTL+NW +EFE+WAP+   + YKG P  R+     +R S F VL+TTYEY+IKD+ +LS+I+W YMIIDEGHRMKN   KLT  L T+Y+S  RL+LTGTPLQN LPELWALLNF+LP IF +  +F++WFN PFA TG  +K+EL EEE++L+IRRLHKVLRPFLLRRLKKDVE++LPDKVE +++C+MSGLQ+ LY  M++ G++  +   +GK G K L NT+MQL+K+CNHPF+++ +E +     G   D+     ++R SGKFEL+DRILPKL  +GHR+LMF QMTQ M I+EDY +YR +++LRLDG TK++DR+ +L +FN+  ++  +FLLSTRAGGLGLNLQTADTV+IFDSDWNPHQDLQAQDRAHRIGQ  EVR+ RL+T  SVEE ILA A++KL++D KVIQAG+F+N+ST  ER   L+S+L     +EE +E+ E+ DDE +N+++AR +DE   F QM  D  R E+  G N+ K+RLIQ+ ELPEF   E+ +   +  +E   GRG+R +    Y++ + D +W+  +  E E             +P + R KR     +E      N   KKK+  A           L++    + + V + +D + R L++ F++LPSKK  PDYY +IK P+ +  I   I    Y+ ++AM+ D + M  N + YNE+GS +YED+  +Q+      E L+ D
Sbjct:  392 IDYYNVAHNIREVVTEQPSILVGGKLKEYQLRGLQWMISLYNNHLNGILADEMGLGKTIQTISLITHLIEKKRQNGPFLVIVPLSTLTNWTMEFERWAPSIVKIVYKGPPQVRKALHPQVRHSNFQVLLTTYEYIIKDRPLLSRIKWIYMIIDEGHRMKNTQSKLTNTLTTYYSSRYRLILTGTPLQNNLPELWALLNFVLPRIFNSIKSFDEWFNTPFANTGGQDKMELTEEESLLVIRRLHKVLRPFLLRRLKKDVEAELPDKVEKVIRCQMSGLQQKLYYQMKKHGMLYVEDAKRGKTGIKGLQNTVMQLKKICNHPFVFEDVERS-IDPTGFNYDM-----LWRVSGKFELLDRILPKLFRSGHRILMFFQMTQIMNIMEDYLHYRQWRYLRLDGSTKADDRSKLLGVFNDPTAEVNLFLLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQTKEVRIYRLITEKSVEENILARAQYKLDIDGKVIQAGKFDNKSTPEEREAFLRSLLENENGEEENDEKGELDDDE-LNEILARGDDELRLFKQMTEDLER-ESPYGKNKEKERLIQVSELPEFYQREEPEKTTDLLQEEPLGRGARRRTPVVYDEAVRDAQWMAEMDMESE------------ARPTRGRPKRNIASVDETPALTLNGKPKKKRGPAPDTLTSEHRSLLRRVCLEIYKAVNELEDDNGRPLNKLFLELPSKKLYPDYYMIIKSPIALDAIRKHINGTFYKTLEAMKSDLMTMFNNARTYNEEGSFVYEDANKMQTAMETKIEELEED 1174          

HSP 2 Score: 123.635 bits (309), Expect = 5.240e-27
Identity = 100/340 (29.41%), Postives = 156/340 (45.88%), Query Frame = 0

Query:  132 QNPQMLQLRAQIMAYRFLARNQPLPPQIAMAVSGKRPEGQGPPGAPPYGPSRPGGPPGSASPGGPPNMQAPAPGGRGPTPNTTGPTGGTPGVAPTGKPNRVTPVAKPAGIDPITLLQERENRLAARVAHRIDELSNLPVSMADDTRTK--------------AEIELRALRLLNFQRQLRAEVVACTRRDTTLETAINVKAYKRTKRQGLREARATEKLEKQQRLEAERRRRQKHQEYLNAVLTHGRDLQNFHRNNLGKIQKLNKAVLNWHANHEREQKKEQERIEKERLRRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYINQLTDMVKQHKVEQVQ 457
            +N + L L+ Q++AY+ L++N P P    ++V  +  + +    +    P +     G                             G+  + P+ K  R     + +  D I            R+  R+ +L + P  M D    K              A +EL+ LRL+  Q  LR +V+ C     T+  A+   + +R K    +  R TE LE+QQR + ERR +QK  +YL  V  HGR++    +N   + QK N+AVL +H++ E+E+++  ER  K+RL+ L   DEE Y KLIDQ KD R+  LL QTD Y++ L   V   KV+Q Q
Sbjct:   68 KNTEKLILKQQVLAYKKLSQNLPAPDDCILSVLLRLSKDEQLLQSIVKQPLQNSKVDGKVRRDF-----------------------GSCQITPSAKQQRKYLQYQISEDDAI----------KNRMFRRMSDLESYPAVMRDVAELKDDNERLNLDTIKRNALVELKKLRLIKQQESLRHQVMHCQPHLRTIVNAVERMSCRRPKLVP-QATRLTEVLERQQRSDRERRLKQKQCDYLQTVCAHGREINVRTKNAQARAQKANRAVLAYHSHIEKEEQRRAERNAKQRLQALKENDEEAYLKLIDQAKDTRITHLLRQTDHYLDSLAAAV---KVQQSQ 370          

BLAST of homeotic gene vs. SwissProt
Match: gi|134589|sp|P22082.1|SNF2_YEAST (RecName: Full=Transcription regulatory protein SNF2; AltName: Full=ATP-dependent helicase SNF2; AltName: Full=Regulatory protein GAM1; AltName: Full=Regulatory protein SWI2; AltName: Full=SWI/SNF complex component SNF2; AltName: Full=Transcription factor TYE3)

HSP 1 Score: 771.541 bits (1991), Expect = 0.000e+0
Identity = 450/972 (46.30%), Postives = 621/972 (63.89%), Query Frame = 0

Query:  268 LPVSMADDTRTKAEIELRALRLLNFQRQLRAEVVACTRRDTTLETAINVKAYKRTKRQGLREARATEKLEKQQRLEAERRRRQKHQEYLNAVLTHGRDLQNFHRNNLGKIQKLN--KAVLN--WHANHE--REQKKEQERIEKERLRRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYINQLTDMVKQHKVEQVQKQKELRKKAKLEEQAGAMLDESSQMSDVRVHVKELSTGKIIRGDNAPLASELESWLEKNPGFEQVPRDEDSDDSDGEEKPETTSSAEAILAKAKEEATKEDEGDGVDYYTIAHTISEEITEQAPMLVGGKLKEYQVKGLEWLVSLYNNCLNGILADEMGLGKTIQTIALITYLMERKKNMGPYLIIVPLSTLSNWALEFEKWAPACNVVSYKGSPAARRTAQNAMRGSKFNVLVTTYEYVIKDKAMLSKIRWKYMIIDEGHRMKNHHCKLTQILNTFYTSNNRLLLTGTPLQNKLPELWALLNFLLPSIFKACNTFEQWFNAPFAITG--EKVELNEEETILIIRRLHKVLRPFLLRRLKKDVESQLPDKVEYIVKCEMSGLQRTLYNHM-QEKGVMKTDKINKGKKGAKALMNTIMQLRKLCNHPFMYQPIEEAYAKHIGMPTDIVTGPDVYRSSGKFELIDRILPKLKATGHRVLMFCQMTQCMTIIEDYFNYRGFKFLRLDGMTKSEDRADMLKIFNEKASDYFIFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARFKLNMDEKVIQAGRFNNRSTGSERRELLQSILRADEEEEEENE-------VPDDEVINQMIARSEDEFEKFTQMDLDRRREEAALGPNRKDRLIQIKELPEFL---LAEDDDDDEEEEEEIVYGRGSRAKKETNYNDQLSDKEWLKVIGAEDEEFDDDDEDDEEIKKPGKRVKRKKREDE 1220
            LPV +  DT T  +I  + L  LN    L   V  C      L+  +N +  + T+   L +  A + L  Q+ +     + + HQ   N++LT      N H N L KI+ +N   A+L    + NHE  + ++K+ E +   RL+ +       Y +  D KK+KRL F       + N   D  +Q + E+  K++    KA  EE    +LD   Q  D R+         ++R  NA L S   +  +      Q    ++  DS  +E  E       +     EE   +D+   VDYY +AH I E+I +Q  +LVGG LK+YQ+KGL+W+VSL+NN LNGILADEMGLGKTIQTI+L+TYL E K   GPYL+IVPLSTLSNW+ EF KWAP    +S+KGSP  R+  Q  +R  +F+V++TT+EY+IK++A+LSK++W +MIIDEGHRMKN   KL+  LNT Y ++ RL+LTGTPLQN LPELWALLNF+LP IF +  +F++WFN PFA TG  +K+EL+EEET+L+IRRLHKVLRPFLLRRLKKDVE +LPDKVE +VKC+MS LQ+ +Y  M + + +   D+ NK   G +   N IMQL+K+CNHPF+++ +E+        PT   T  D++R +GKFEL+DRILPKLKATGHRVL+F QMTQ M I+ED+  Y   K+LRLDG TKS++R+++L++FN   S+Y  F+LSTRAGGLGLNLQTADTV+IFD+DWNPHQDLQAQDRAHRIGQKNEVR+LRL+T NSVEE IL  A  KL++D KVIQAG+F+N+ST  E+  LL+S+L A+EE  ++ E          D  IN+++AR+++E    T+MD DR ++E  LG   K RL++  ELP+     +  +   +E E   +  GRG+R +K   YND +S+++WL+       E  DD+++D++ +K     +R K+ED+
Sbjct:  484 LPVGI--DTHTATDI-YQTLIALN----LDTTVNDC------LDKLLNDECTESTRENALYDYYALQLLPLQKAVRGHVLQFEWHQ---NSLLT------NTHPNFLSKIRNINVQDALLTNQLYKNHELLKLERKKTEAVA--RLKSMNKSAINQYNRRQD-KKNKRLKFGHRLIATHTNLERD--EQKRAEKKAKERLQALKANDEEAYIKLLD---QTKDTRI-------THLLRQTNAFLDSLTRAVKD------QQKYTKEMIDSHIKEASEEVDDLSMVPKMKDEEYDDDDDNSNVDYYNVAHRIKEDIKKQPSILVGGTLKDYQIKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTYLYEMKNIRGPYLVIVPLSTLSNWSSEFAKWAPTLRTISFKGSPNERKAKQAKIRAGEFDVVLTTFEYIIKERALLSKVKWVHMIIDEGHRMKNAQSKLSLTLNTHYHADYRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIELSEEETLLVIRRLHKVLRPFLLRRLKKDVEKELPDKVEKVVKCKMSALQQIMYQQMLKYRRLFIGDQNNKKMVGLRGFNNQIMQLKKICNHPFVFEEVEDQIN-----PTR-ETNDDIWRVAGKFELLDRILPKLKATGHRVLIFFQMTQIMDIMEDFLRYINIKYLRLDGHTKSDERSELLRLFNAPDSEYLCFILSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTNSVEEVILERAYKKLDIDGKVIQAGKFDNKSTSEEQEALLRSLLDAEEERRKKRESGVEEEEELKDSEINEILARNDEEMAVLTRMDEDRSKKEEELGV--KSRLLEKSELPDIYSRDIGAELKREESESAAVYNGRGARERKTATYNDNMSEEQWLRQF-----EVSDDEKNDKQARK-----QRTKKEDK 1394          

HSP 2 Score: 80.8777 bits (198), Expect = 6.506e-14
Identity = 61/220 (27.73%), Postives = 104/220 (47.27%), Query Frame = 0

Query:  232 VTPVAKPAGIDPITLLQERENRLAARVAHRIDELSN--LPVSMADDTRTKAEIELRALRLLNFQRQLRAEVVACTRRDTTLETAINVKAYKRTKRQGLREARATEKLEKQQRLEAERRRRQKHQEYLNAVLTHGRDLQNFHRNNLGKIQKLNKAVLNWHANHEREQKKEQERIEKERLRRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYINQLTDMVK 449
            + P   P GID  T     +  +A  +   +++  +  L     + TR  A  +  AL+LL  Q+ +R  V+       +L T  +     + +   +++A  T +L K   L    R++ +    L ++     +  N  ++   K  K    ++  H N ER+++K  E+  KERL+ L A DEE Y KL+DQ KD R+  LL QT+ +++ LT  VK
Sbjct:  479 IEPGVLPVGIDTHTATDIYQTLIALNLDTTVNDCLDKLLNDECTESTRENALYDYYALQLLPLQKAVRGHVLQFEWHQNSLLTNTHPNFLSKIRNINVQDALLTNQLYKNHELLKLERKKTEAVARLKSMNKSAINQYNRRQDKKNKRLKFGHRLIATHTNLERDEQKRAEKKAKERLQALKANDEEAYIKLLDQTKDTRITHLLRQTNAFLDSLTRAVK 698          

HSP 3 Score: 71.633 bits (174), Expect = 4.002e-11
Identity = 36/102 (35.29%), Postives = 57/102 (55.88%), Query Frame = 0

Query: 1239 KRLQKKMATLMQIVVQYKDQDERVLSEPFMKLPSKKELPDYYEVIKRPVDIARIMNKIADGKYEDVDAMEKDFVLMCANTQKYNEDGSLIYEDSIVLQSVFT 1340
            +++ K+   L    + Y+++  R LS+ F+  PSK   PDYY +IK PV    I   I    Y  +    +DF L+ +N + YN +GS++YEDS+ L+ V T
Sbjct: 1548 EKVAKQALDLYHFALNYENEAGRKLSDIFLSKPSKALYPDYYMIIKYPVAFDNINTHIETLAYNSLKETLQDFHLIFSNARIYNTEGSVVYEDSLELEKVVT 1649          

BLAST of homeotic gene vs. nr
Match: gi|1068385357|ref|XP_018059755.1| (PREDICTED: ATP-dependent helicase brm isoform X1 [Atta colombica])

HSP 1 Score: 1597.41 bits (4135), Expect = 0.000e+0
Identity = 833/1329 (62.68%), Postives = 1022/1329 (76.90%), Query Frame = 0

Query:   65 DLQKLQNSINQMEERGMQNDPRYNQARQLHQNMMSRQGPPPGAPGAPPGAGPPGGPAGPPGQDKGQFQNPQMLQLRAQIMAYRFLARNQPLPPQIAMAVSGKRPEGQGPPGAPPYGPSRPGGPPG-SASPGGPPNMQAPAPGGRGPTPNTTGPTGGT-PGVAPT----------GKPNRVTPVAKPAGIDPITLLQERENRLAARVAHRIDELSNLPVSMADDTRTKAEIELRALRLLNFQRQLRAEVVACTRRDTTLETAINVKAYKRTKRQGLREARATEKLEKQQRLEAERRRRQKHQEYLNAVLTHGRDLQNFHRNNLGKIQKLNKAVLNWHANHEREQKKEQERIEKERLRRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYINQLTDMVKQHKVEQVQKQKELRKKAKLEE--QAGAMLDESSQMSDVRVHVKELSTGKIIRGDNAPLASELESWLEKNPGFEQVP-------------------RDEDSDDSDGEEKPETTSSAEAILAKAKEEATKEDEGDGVDYYTIAHTISEEITEQAPMLVGGKLKEYQVKGLEWLVSLYNNCLNGILADEMGLGKTIQTIALITYLMERKKNMGPYLIIVPLSTLSNWALEFEKWAPACNVVSYKGSPAARRTAQNAMRGSKFNVLVTTYEYVIKDKAMLSKIRWKYMIIDEGHRMKNHHCKLTQILNTFYTSNNRLLLTGTPLQNKLPELWALLNFLLPSIFKACNTFEQWFNAPFAITGEKVELNEEETILIIRRLHKVLRPFLLRRLKKDVESQLPDKVEYIVKCEMSGLQRTLYNHMQEKGVMKTD---KINKGKKGAKALMNTIMQLRKLCNHPFMYQPIEEAYAKHIGM-PTDIVTGPDVYRSSGKFELIDRILPKLKATGHRVLMFCQMTQCMTIIEDYFNYRGFKFLRLDGMTKSEDRADMLKIFNEKASDYFIFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARFKLNMDEKVIQAGRFNNRSTGSERRELLQSIL-RADEEEEEENEVPDDEVINQMIARSEDEFEKFTQMDLDRRREEAALGPNRKDRLIQIKELPEFLLAEDDDDDE---EEEEEIVYGRGSRAKKETNYNDQLSDKEWLKVIGAEDEEFDDDDEDDEEIKKPGKRVKRKKREDEEVEDEFANQNRKKKKSSAK----RLQKKMATLMQIVVQYKD-QDERVLSEPFMKLPSKKELPDYYEVIKRPVDIARIMNKIADGKYEDVDAMEKDFVLMCANTQKYNEDGSLIYEDSIVLQSVFTNARERLD 1347
            +L  LQ +I+ MEE+G+Q DPRY+Q   L     +RQG   G                    DK  F + Q+ QLRAQIMAYR LARNQ +P Q+A+A  G         GAPP        PPG S  P  P        G + P PN  GPTG   PG               K NRVT V KPAG+DP+ +LQERENR+AAR++ R+++LSNLP +M +D R +A+IELR LR+LNFQRQLR+E++ACTR+DTTLETA+NVKAYKRTKRQGLREARATEKLEKQQ+LEAER+RRQKHQE+L++VL HG+D + FHRNN+ K+ +LNKAVLN+HAN EREQKKEQERIEKER+RRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYI+ LT+MVKQHK+EQ +KQ E +K+ K ++  Q G   ++     D R+ V E +TG+ + GD APL S+L ++LE +PG+E +                    +D+   DS+ E+  +T   A     K +++  K +E     YY+IAHT+ E +TEQA ++V GKLKEYQ+KGLEWLVSL+NN LNGILADEMGLGKTIQTIAL+TYLME+KK  GP+LIIVPLSTLSNW LEFEKWAP+  VVSYKGSPA RRT Q+ MR +KFNVL+TTYEYVIKDK +L+K++WKYMIIDEGHRMKNHHCKLTQ+LNT Y + +RLLLTGTPLQNKLPELWALLNFLLPSIFK+C+TFEQWFNAPFA TGEKVELNEEETILIIRRLHKVLRPFLLRRLKK+VESQLPDKVEYI+KC+MSGLQ+ LY HMQ KGV+ TD   K  +GK GAKALMNTI+QLRKLCNHPFM+Q IEE Y +H+G   + ++TGPD+YR+SGKFEL+DRILPKLKAT HRVL+FCQMTQ MTI+EDY ++RGF +LRLDG TK+EDR D+LK FN+  S+YF+FLLSTRAGGLGLNLQ ADTV+IFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAAR+KLNMDEKVIQAG F+ +STGSER++ LQSIL + D ++EEENEVPDDE +NQMIAR+E EFE F ++DL+RRREEA LGPNRK RL++  ELP++L+ +DD+ +    EE+E+   GRGSR +KE +Y D L++KEWLK I  +  E+++++EDD++ KK  KR K+ + +DE +         KK++ +      ++++ M  L+ +VV Y D  D R+LSEPFMKLPS++ELPDYYE+IK+P+ I +++ KI +GKY D+D +EKDF+ +C N Q YNE+ SLI+EDSIVLQSVFTNAR+RL+
Sbjct:  728 NLNALQKAIDSMEEKGLQEDPRYSQLLALR----ARQGSGMG--------------------DKQAFNSQQLQQLRAQIMAYRLLARNQAVPQQVALAAQG---------GAPP--------PPGMSQRPIDPSQGPVTTSGPQIPGPNVIGPTGAPRPGCQTPQQQQQQPQSGAKANRVTSVGKPAGLDPLLILQERENRVAARISLRMEQLSNLPTNMPEDLRIQAQIELRMLRVLNFQRQLRSEIIACTRKDTTLETAVNVKAYKRTKRQGLREARATEKLEKQQKLEAERKRRQKHQEFLSSVLQHGKDFKEFHRNNVAKLARLNKAVLNYHANAEREQKKEQERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYISNLTEMVKQHKIEQKRKQVEEQKRKKKKKKLQDGENAEDGGANDDTRIGVIETATGRTLTGDEAPLMSQLSAFLEAHPGWEPIESDSEEDEDDDEEENGENESKDKSMGDSEEEKVKKTIHKA-----KVEDDEYKTEE---QTYYSIAHTVHEVVTEQASIMVNGKLKEYQIKGLEWLVSLFNNNLNGILADEMGLGKTIQTIALVTYLMEKKKVNGPFLIIVPLSTLSNWVLEFEKWAPSVVVVSYKGSPAGRRTIQSQMRATKFNVLLTTYEYVIKDKGVLAKLQWKYMIIDEGHRMKNHHCKLTQVLNTHYLAPHRLLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYKHMQSKGVLLTDGSEKGKQGKGGAKALMNTIVQLRKLCNHPFMFQAIEEKYCEHVGTQGSGVITGPDLYRASGKFELLDRILPKLKATNHRVLLFCQMTQLMTIMEDYLSWRGFMYLRLDGTTKAEDRGDLLKKFNDPGSEYFLFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERQQFLQSILHQDDADDEEENEVPDDETVNQMIARTEGEFEIFQKLDLERRREEAKLGPNRKSRLLEEAELPDWLVKDDDEVERWTYEEDEDRFLGRGSRQRKEVDYTDSLTEKEWLKAIDDDGAEYEEEEEDDKKKKKTRKRKKKGEEDDEPMP--------KKRRGAGSLVDPKMKRAMKKLITLVVNYTDSSDGRLLSEPFMKLPSRRELPDYYEIIKKPLTINKLLQKIEEGKYADLDELEKDFMQLCKNAQIYNEEASLIHEDSIVLQSVFTNARQRLE 1999          

BLAST of homeotic gene vs. nr
Match: gi|746848537|ref|XP_011054677.1| (PREDICTED: ATP-dependent helicase brm isoform X1 [Acromyrmex echinatior])

HSP 1 Score: 1597.41 bits (4135), Expect = 0.000e+0
Identity = 836/1319 (63.38%), Postives = 1025/1319 (77.71%), Query Frame = 0

Query:   65 DLQKLQNSINQMEERGMQNDPRYNQARQLHQNMMSRQGPPPGAPGAPPGAGPPGGPAGPPGQDKGQFQNPQMLQLRAQIMAYRFLARNQPLPPQIAMAVSGKRPEGQGPPGAPPYGPSRPGGPPG-SASPGGPPNMQAPAPGGRGPTPNTTGPTGGT-PGVAPT----------GKPNRVTPVAKPAGIDPITLLQERENRLAARVAHRIDELSNLPVSMADDTRTKAEIELRALRLLNFQRQLRAEVVACTRRDTTLETAINVKAYKRTKRQGLREARATEKLEKQQRLEAERRRRQKHQEYLNAVLTHGRDLQNFHRNNLGKIQKLNKAVLNWHANHEREQKKEQERIEKERLRRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYINQLTDMVKQHKVEQVQKQKELRKKAKLEE--QAGAMLDESSQMSDVRVHVKELSTGKIIRGDNAPLASELESWLEKNPGFEQVPRDEDSDDS-----DGEEKPETTS-SAEAILAKAKEEATKEDEGDGVD---YYTIAHTISEEITEQAPMLVGGKLKEYQVKGLEWLVSLYNNCLNGILADEMGLGKTIQTIALITYLMERKKNMGPYLIIVPLSTLSNWALEFEKWAPACNVVSYKGSPAARRTAQNAMRGSKFNVLVTTYEYVIKDKAMLSKIRWKYMIIDEGHRMKNHHCKLTQILNTFYTSNNRLLLTGTPLQNKLPELWALLNFLLPSIFKACNTFEQWFNAPFAITGEKVELNEEETILIIRRLHKVLRPFLLRRLKKDVESQLPDKVEYIVKCEMSGLQRTLYNHMQEKGVMKTD---KINKGKKGAKALMNTIMQLRKLCNHPFMYQPIEEAYAKHIGM-PTDIVTGPDVYRSSGKFELIDRILPKLKATGHRVLMFCQMTQCMTIIEDYFNYRGFKFLRLDGMTKSEDRADMLKIFNEKASDYFIFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARFKLNMDEKVIQAGRFNNRSTGSERRELLQSIL-RADEEEEEENEVPDDEVINQMIARSEDEFEKFTQMDLDRRREEAALGPNRKDRLIQIKELPEFLLAEDDDDDE---EEEEEIVYGRGSRAKKETNYNDQLSDKEWLKVIGAEDEEFDDDDEDDEEIKKPGKRVKRKKREDEEVEDEFANQNRKKKKSSAK----RLQKKMATLMQIVVQYKD-QDERVLSEPFMKLPSKKELPDYYEVIKRPVDIARIMNKIADGKYEDVDAMEKDFVLMCANTQKYNEDGSLIYEDSIVLQSVFTNARERLD 1347
            +L  LQ +I+ MEE+G+Q DPRY+Q   L     +RQG          G G           DK  F + Q+ QLRAQIMAYR LARNQ +P Q+A+A  G         GAPP        PPG S  P  P        G + P PN  GPTG   PG               K NRVT V KPAG+DP+ +LQERENR+AAR++ R+++LSNLP +M +D R +A+IELR LR+LNFQRQLR+E++ACTR+DTTLETA+NVKAYKRTKRQGLREARATEKLEKQQ+LEAER+RRQKHQE+L++VL HG+D + FHRNN+ K+ +LNKAVLN+HAN EREQKKEQERIEKER+RRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYI+ LT+MVKQHK+EQ +KQ E +K+ K ++  Q G   ++     D R+ V E +TG+ + GD APL S+L ++LE +PG+E +  D + D+      +GE K ++   S E  + K   +A  ED+    +   YY+IAHT+ E +TEQA ++V GKLKEYQ+KGLEWLVSL+NN LNGILADEMGLGKTIQTIAL+TYLME+KK  GP+LIIVPLSTLSNW LEFEKWAP+  VVSYKGSPA RRT Q+ MR +KFNVL+TTYEYVIKDK +L+K++WKYMIIDEGHRMKNHHCKLTQ+LNT Y + +RLLLTGTPLQNKLPELWALLNFLLPSIFK+C+TFEQWFNAPFA TGEKVELNEEETILIIRRLHKVLRPFLLRRLKK+VESQLPDKVEYI+KC+MSGLQ+ LY HMQ KGV+ TD   K  +GK GAKALMNTI+QLRKLCNHPFM+Q IEE Y +H+G   + ++TGPD+YR+SGKFEL+DRILPKLKAT HRVL+FCQMTQ MTI+EDY ++RGF +LRLDG TK+EDR D+LK FN+  S+YF+FLLSTRAGGLGLNLQ ADTV+IFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAAR+KLNMDEKVIQAG F+ +STGSER++ LQSIL + D ++EEENEVPDDE +NQMIAR+E EFE F ++DL+RRREEA LGPNRK RL++  ELP++L+ +DD+ +    EE+E+   GRGSR +KE +Y D L++KEWLK I  +  E+++++EDD++ KK  KR K+ + +DE +         KK++ +      ++++ M  L+ +VV Y D  D R+LSEPFMKLPS++ELPDYYE+IK+P+ I +++ KI +GKY D+D +EKDF+ +C N Q YNE+ SLI+EDSIVLQSVFTNAR+RL+
Sbjct:  725 NLNALQKAIDSMEEKGLQEDPRYSQLLALR----ARQGS---------GMG-----------DKQAFNSQQLQQLRAQIMAYRLLARNQAVPQQVALAAQG---------GAPP--------PPGMSQRPIDPSQGPVTTSGPQIPGPNVIGPTGTPRPGCQTPQQQQQQPQSGAKANRVTSVGKPAGLDPLLILQERENRVAARISLRMEQLSNLPTNMPEDLRIQAQIELRMLRVLNFQRQLRSEIIACTRKDTTLETAVNVKAYKRTKRQGLREARATEKLEKQQKLEAERKRRQKHQEFLSSVLQHGKDFKEFHRNNVAKLARLNKAVLNYHANAEREQKKEQERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYISNLTEMVKQHKIEQKRKQVEEQKRKKKKKKLQDGENAEDGGVNDDTRIGVIETATGRTLTGDEAPLMSQLSAFLEAHPGWEPIESDSEEDEDDDEEENGESKDKSMGDSEEEKVKKTIHKAKVEDDEYKTEEQTYYSIAHTVHEVVTEQASIMVNGKLKEYQIKGLEWLVSLFNNNLNGILADEMGLGKTIQTIALVTYLMEKKKVNGPFLIIVPLSTLSNWVLEFEKWAPSVVVVSYKGSPAGRRTIQSQMRATKFNVLLTTYEYVIKDKGVLAKLQWKYMIIDEGHRMKNHHCKLTQVLNTHYLAPHRLLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYKHMQSKGVLLTDGSEKGKQGKGGAKALMNTIVQLRKLCNHPFMFQAIEEKYCEHVGTQGSGVITGPDLYRASGKFELLDRILPKLKATNHRVLLFCQMTQLMTIMEDYLSWRGFMYLRLDGTTKAEDRGDLLKKFNDPGSEYFLFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERQQFLQSILHQDDADDEEENEVPDDETVNQMIARTEGEFEIFQKLDLERRREEAKLGPNRKSRLLEEAELPDWLVKDDDEVERWTYEEDEDRFLGRGSRQRKEVDYTDSLTEKEWLKAIDDDGAEYEEEEEDDKKKKKTRKRKKKGEEDDEPMP--------KKRRGAGSLVDPKMKRAMKKLITLVVNYTDSSDGRLLSEPFMKLPSRRELPDYYEIIKKPLTINKLLQKIEEGKYADLDELEKDFMQLCKNAQIYNEEASLIHEDSIVLQSVFTNARQRLE 1994          

BLAST of homeotic gene vs. nr
Match: gi|1227978062|ref|XP_021920576.1| (ATP-dependent helicase brm-like isoform X1 [Zootermopsis nevadensis] >gi|1227978064|ref|XP_021920578.1| ATP-dependent helicase brm-like isoform X1 [Zootermopsis nevadensis] >gi|1227978066|ref|XP_021920579.1| ATP-dependent helicase brm-like isoform X1 [Zootermopsis nevadensis])

HSP 1 Score: 1597.02 bits (4134), Expect = 0.000e+0
Identity = 860/1422 (60.48%), Postives = 1029/1422 (72.36%), Query Frame = 0

Query:   39 GMRPSPSPSPMTGPPNSYPPTQGPPSDLQKLQNSINQMEERGMQNDPRYNQARQLHQNMMSRQGPPPGAPGAPPGA---GPPGGPAGPPGQDKGQFQNPQMLQLRAQIMAYRFLARNQPLPPQIAMAVSGKRPE--------GQGPPGA-------PPYGPSRPGGPPGSASPGGPPNMQAPAPG----GRGPTPNT---TGPTGGTPGVAPTG---------------------------KPNRVTPVAKPAGIDPITLLQERENRLAARVAHRIDELSNLPVSMADDTRTKAEIELRALRLLNFQRQLRAEVVACTRRDTTLETAINVKAYKRTKRQGLREARATEKLEKQQRLEAERRRRQKHQEYLNAVLTHGRDLQNFHRNNLGKIQKLNKAVLNWHANHEREQKKEQERIEKERLRRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYINQLTDMVKQHKVEQVQKQKELRKKAKLE-------EQAGAMLDESSQMSDVRVHVKELSTGKIIRGDNAPLASELESWLEKNPGFEQVPR--------------------------DEDSDDSDGEEKPETTSSAEAILAKAK-EEATKEDEGDGVDYYTIAHTISEEITEQAPMLVGGKLKEYQVKGLEWLVSLYNNCLNGILADEMGLGKTIQTIALITYLMERKKNMGPYLIIVPLSTLSNWALEFEKWAPACNVVSYKGSPAARRTAQNAMRGSKFNVLVTTYEYVIKDKAMLSKIRWKYMIIDEGHRMKNHHCKLTQILNTFYTSNNRLLLTGTPLQNKLPELWALLNFLLPSIFKACNTFEQWFNAPFAITGEKVELNEEETILIIRRLHKVLRPFLLRRLKKDVESQLPDKVEYIVKCEMSGLQRTLYNHMQEKGVMKTD---KINKGKKGAKALMNTIMQLRKLCNHPFMYQPIEEAYAKHIGMPTDIVTGPDVYRSSGKFELIDRILPKLKATGHRVLMFCQMTQCMTIIEDYFNYRGFKFLRLDGMTKSEDRADMLKIFNEKASDYFIFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARFKLNMDEKVIQAGRFNNRSTGSERRELLQSIL-RADEEEEEENEVPDDEVINQMIARSEDEFEKFTQMDLDRRREEAALGPNRKDRLIQIKELPEFLLAEDDDDDE---EEEEEIVYGRGSRAKKETNYNDQLSDKEWLKV------------------IGAEDEEFDDDDEDDEEIKKPGKRVKRKKREDEEVEDEFANQNRKKKKSSAKRLQKKMATLMQIVVQYKDQDERVLSEPFMKLPSKKELPDYYEVIKRPVDIARIMNKIADGKYEDVDAMEKDFVLMCANTQKYNEDGSLIYEDSIVLQSVFTNARERLDAD 1349
            GM PSP  S    P +S   T       Q LQ +I  MEE+GMQ+DPRY+Q   L    +S   P    P         GP G   G P   K  F + Q+ QLR QIMAYR LARNQPL  Q+A+AV GKR +         Q  PGA       P   P   GG P S SP   P   AP+PG    G  PT +T   TG   GTP V PT                            K NRVTP+AKPAG+DP+ +LQERENRLAAR+AHRI+EL+NLP  MA+D + KA+IELRALRLLNFQRQLR EVVACTR+DT LET+ ++K YKRTKRQGLREARATEKLEKQQ+LEAER+RRQKHQEYLNAVL HG+DL+ +HRNN+ KI +LN+AVLN HAN EREQKKEQERIEKER+RRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYI  LT+MVKQHKVEQ +KQ+E +++ K +       E    + DESSQMSDVRV V E ++GKI+ GD APLAS+ + WL+ +PG+E  PR                           +  D +    K      A+ ++ KAK E+   ++  +   YY+IAHTI+E++TEQA ++V GKLKEYQ++GLEWLVSLYNN LNGILADEMGLGKTIQTI LITYLME+K+  GPYLIIVPLSTLSNW LEFEKWAP+  VV+YKGSPA RRT Q+ MR +KFNVL+TTYEY+IKDKA+L+K+RWK+MIIDEGHRMKNHHCKLTQ+LNT Y + +RLLLTGTPLQNKLPELWALLNFLLPSIFK+ +TFEQWFNAPFA TGEKVELNEEETILIIRRLHKVLRPFLLRRLKK+VESQLPDKVEYI+KC+MSGLQR LY+HMQ KGV+ TD   K  +GK GAKALMNTIMQLRKLCNHPFM+Q IE+AY  H+G+   +V GPD+YR+SGKFEL+DRILPKLKAT HRVL+FCQMTQ MTI+EDY  +RGF +LRLDG TK+EDR ++L+ FN   SDYF+FLLSTRAGGLGLNLQ+ADTV+IFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAAR+KLNMDEKVIQAG F+ +STGSER++ L++IL + + ++EEENEVPDDE +NQMIAR E EFE F +MDL+RRRE++ LG +R+ RL++ +ELP +L+ ED++ D+   EEEEE  YGRGSR +KE +Y D L++KEWLK                      + +  D+DD                  E   V+        +K      +++K+M  L+ IV++Y D+D R LS PFMKLPSK+ELP YY +IKRP+DI +I  ++ + KY     +E+DF+ MC N QKYNE+ SLI+EDSIVL++VF NAR RL+ D
Sbjct:   93 GMLPSPQMSGQMVPQSSSQDT------YQALQRAIGAMEEKGMQSDPRYSQLLALRARQVSYSSPGQADPSRVMQTCLQGPGGFLDGTP---KYIFSSLQLQQLRVQIMAYRLLARNQPLTSQMALAVQGKRIDPAPLQRMPQQLDPGAVGGVMQQPMRAPGPVGGQPPSQSP--LPGQPAPSPGQQTVGTSPTTSTSPGTGAGTGTPVVQPTSATQCPRSLPSSGPAASAQSAAQPPPQQKQNRVTPIAKPAGLDPLIILQERENRLAARIAHRIEELNNLPTVMAEDLKIKAQIELRALRLLNFQRQLRTEVVACTRKDTMLETSCHIKTYKRTKRQGLREARATEKLEKQQKLEAERKRRQKHQEYLNAVLQHGKDLKEYHRNNIAKILRLNRAVLNHHANAEREQKKEQERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYIGNLTEMVKQHKVEQRRKQREQKERKKKKKKRSEDGEMIDGLNDESSQMSDVRVTVMETASGKILCGDEAPLASQFQMWLDMHPGWEAAPREDDDEDEDDDVSDDDSDDYEDEDRVVKKSRDGNSLNSKLSEEEKAKVVIQKAKVEDDEYKNFTEEQTYYSIAHTITEKVTEQASVMVNGKLKEYQIRGLEWLVSLYNNNLNGILADEMGLGKTIQTIGLITYLMEKKRVNGPYLIIVPLSTLSNWVLEFEKWAPSVIVVAYKGSPAMRRTIQSQMRATKFNVLLTTYEYIIKDKAVLAKLRWKFMIIDEGHRMKNHHCKLTQVLNTHYLAPHRLLLTGTPLQNKLPELWALLNFLLPSIFKSVSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQRVLYSHMQSKGVLLTDGSEKGKQGKGGAKALMNTIMQLRKLCNHPFMFQHIEKAYCDHVGIHGSVVIGPDLYRASGKFELLDRILPKLKATSHRVLLFCQMTQLMTIMEDYLGWRGFIYLRLDGTTKAEDRGELLRKFNSPGSDYFVFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERQQFLKTILHQDEADDEEENEVPDDETVNQMIARCETEFELFQKMDLERRREDSKLGSDRRPRLMEEQELPTWLVKEDEEGDKWTAEEEEERYYGRGSRQRKEVDYTDSLTEKEWLKAIDEGIEEEDEEERKPARKKFRKRKRKDEDDPGSGSSATVVGPPVVMVVEQSHVKKRRGRPPLEKGSMLNSKIKKQMRKLVNIVIKYTDRDGRTLSGPFMKLPSKQELPGYYNIIKRPIDIKKIQQRLEENKYSSFFDLERDFIQMCRNAQKYNEEASLIHEDSIVLETVFANARVRLEQD 1503          

BLAST of homeotic gene vs. nr
Match: gi|478261415|gb|ENN80792.1| (hypothetical protein YQE_02801, partial [Dendroctonus ponderosae] >gi|546680988|gb|ERL91162.1| hypothetical protein D910_08502 [Dendroctonus ponderosae])

HSP 1 Score: 1597.02 bits (4134), Expect = 0.000e+0
Identity = 866/1407 (61.55%), Postives = 1042/1407 (74.06%), Query Frame = 0

Query:    7 PPAGAPGPMPVRGGPPGSGPHSPMPPPESPSPGMRPSPSPSPMTGPPNSYPPTQGPPSDLQKLQNSINQMEERGMQNDPRYNQARQLHQNMMSRQGPPPGAPGAPPGAGPPGGPAGPPGQDKGQFQNPQMLQLRAQIMAYRFLARNQPLPPQIAMAVSGKRPEGQGPPGA--PPYGPSRPGGP------------PGSASPGGPPNMQAPAPGG-RGPTPNTTGPTGGTPGVAPTG-----KPNRVTPVAKPAGIDPITLLQERENRLAARVAHRIDELSNLPVSMADDTRTKAEIELRALRLLNFQRQLRAEVVACTRRDTTLETAINVK-AYKRTKRQGLREARATEKLEKQQRLEAERRRRQKHQEYLNAVLTHGRDLQNFHRNNLGKIQKLNKAVLNWHANHEREQKKEQERIEKERLRRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYINQLTDMVKQHKVEQVQKQKELRKKAKLEEQA----GAML--DESSQMSDVRVHVKELSTGKIIRGDNAPLASELESWLEKNPGFEQVPRDEDSDDSDGEEKP--ETTSSAEAILAKAKEEATKEDE-----GDGVDYYTIAHTISEEITEQAPMLVGGKLKEYQVKGLEWLVSLYNNCLNGILADEMGLGKTIQTIALITYLMERKKNMGPYLIIVPLSTLSNWALEFEKWAPACNVVSYKGSPAARRTAQNAMRGSKFNVLVTTYEYVIKDKAMLSKIRWKYMIIDEGHRMKNHHCKLTQILNTFYTSNNRLLLTGTPLQNKLPELWALLNFLLPSIFKACNTFEQWFNAPFAITGEKVELNEEETILIIRRLHKVLRPFLLRRLKKDVESQLPDKVEYIVKCEMSGLQRTLYNHMQEKGVMKTD---KINKGKKGAKALMNTIMQLRKLCNHPFMYQPIEEAYAKHIGMPTDIVTG----PDVYRSSGKFELIDRILPKLKATGHRVLMFCQMTQCMTIIEDYFNYRGFKFLRLDGMTKSEDRADMLKIFNEKASDYFIFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARFKLNMDEKVIQAGRFNNRSTGSERRELLQSIL-RADEEEEEENEVPDDEVINQMIARSEDEFEKFTQMDLDRRREEAALGPNRKDRLIQIKELPEFLLAEDDDDD--EEEEEEIVYGRGSRAKKETNYNDQLSDKEWLKVIGAEDEEFDDDDEDDEEIKKPGKRVKRKKREDEEVEDEFAN-QNRKKKKSSA---KRLQKKMATLMQIVVQYKDQDERVLSEPFMKLPSKKELPDYYEVIKRPVDIARIMNKIADGKYEDVDAMEKDFVLMCANTQKYNEDGSLIYEDSIVLQSVFTNARERLDADPDAGDDKDDKDDMSLG 1365
            PP G     P    PP   P   MPP   PS G  PSP+  P +G   S    Q    +L+ LQ++I+ M+E+GMQ DPRY+Q   L                    A   G PA             QM QLR QIMAYR+LARNQP+P QI MA+ GKRP+G     +  PP G   P  P            P  A P  PP    P PGG + P P+            P G     K  R T V KP G+DPI LLQERENR+AAR+A R+++L+NLP  M ++ R +A+IELRALR LNFQRQLR E++ACTRRDTTLETA+N+K AYKRTKRQGLREARATEKLEKQQ+LEAER+RRQKHQE+LN++L HG+D ++FHRN+LG++ KLNKA+LN+HAN EREQKKEQERIEKER+RRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYI  LT+MVKQHK+EQ +KQ E  ++ K + +     G ++  DE SQ SD  + V E+S+GK + GD APL S+L++WL++NPG+E    D++ DD   E K   E  S  +   A  K+   ++DE     G+   YY IAHT+ E +TEQA +++ G+LKEYQ+KGLEWLVSLYNN LNGILADEMGLGKTIQTI LITYLME+KK  GP+LIIVPLSTLSNW LEFEKWAP+  VVSYKGSPA RR  Q+ MR +KFNVL+TTYEYVIKDK +L+K++WKYMIIDEGHRMKNHHCKLTQ+LNT Y + +RLLLTGTPLQNKLPELWALLNFLLPSIFK+C+TFEQWFNAPFA TGEKVELNEEETILIIRRLHKVLRPFLLRRLKK+VESQLPDKVEYI+KC+MSGLQR LY HMQ KGV+ TD   + NKGK GAKALMNTI+QLRKLCNHPFM+Q IEE +  HIG+   +++G    PD+YR+SGKFEL+DRILPKLK T HRVL+FCQMTQ MTI+EDY  YRGF +LRLDG TK+EDR D+LK FN K S+YFIFLLSTRAGGLGLNLQ+ADTVVIFDSDWNPHQDLQAQDRAHRIGQ NEVRVLRLMTVNSVEERILAAAR+KLNMDEKVIQAG F+ +STGSER++ LQ+IL +  ++EEEENEVPDDE +NQM+ARS DEFE F +MDL+RRRE+A LG  RK RLI   ELP++L+ EDD+ D    ++ +++ GRGSR +KE +Y D L++KEW+K I   D+      E+DEE  +P KR + K+R+  E  D  A   +RKK K       +L+++M  LM IV +Y D D R+LSEPFMKLP +K+ PDYYEVIK+P+DI RI+ +I D KY ++  +E+DF+L+C N Q YNE+ SLI+EDSIVLQSVFTNA+ R++ D   G+DK  + D   G
Sbjct:   42 PPQGQGQLHP----PPHLSPQGHMPPG-PPSQG-HPSPTHQPSSG---SVQGLQQGQDNLRALQSAIDSMDEKGMQEDPRYSQLLALR-------------------ARANGTPA---------LSQIQMTQLRNQIMAYRYLARNQPVPQQILMAIQGKRPDGSPLQASTPPPGGQDCPRDPLEAPELSPSITMPPQAQPMRPPMQPHPHPGGYQQPPPSQLYKQQPQQQPRPVGGIQHLKQARTTTVPKPVGLDPIMLLQERENRVAARIAARMEQLANLPSDMTEELRLQAQIELRALRCLNFQRQLRTEIIACTRRDTTLETAVNMKQAYKRTKRQGLREARATEKLEKQQKLEAERKRRQKHQEFLNSILQHGKDFKDFHRNSLGRVGKLNKAILNYHANAEREQKKEQERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYIASLTEMVKQHKIEQRKKQHEEERRKKRKRKRLAAEGVLIGDDEGSQDSDKPITVVEVSSGKKLGGDEAPLLSQLQAWLQQNPGWEIADTDDEDDDDYPEHKAGQEPKSEEDKAKALIKKAKVEDDEYHKRIGEEQSYYGIAHTVHEMVTEQASIMINGQLKEYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIGLITYLMEKKKVNGPFLIIVPLSTLSNWVLEFEKWAPSVIVVSYKGSPAGRRQIQSQMRSTKFNVLLTTYEYVIKDKGVLAKLQWKYMIIDEGHRMKNHHCKLTQVLNTHYMAPHRLLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQRVLYRHMQSKGVLLTDGSERGNKGKGGAKALMNTIVQLRKLCNHPFMFQHIEEKWCDHIGIAGGVISGVMCSPDIYRASGKFELLDRILPKLKTTNHRVLLFCQMTQLMTIMEDYLTYRGFGYLRLDGTTKAEDRGDLLKKFNAKNSEYFIFLLSTRAGGLGLNLQSADTVVIFDSDWNPHQDLQAQDRAHRIGQLNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERQQFLQTILHQDGDDEEEENEVPDDETVNQMVARSVDEFELFQKMDLERRREDAKLGAARKPRLIVESELPDWLVKEDDEVDPWNYDDNDVIMGRGSRQRKEVDYTDSLTEKEWMKAIDESDD------EEDEEDDEPKKRKRGKRRKKAEDSDSDAGPSSRKKLKGKLPDENKLKRQMKKLMTIVTKYTDSDGRLLSEPFMKLPPRKDYPDYYEVIKKPMDIMRIITRIEDAKYTEMADLERDFMLLCQNAQIYNEEASLIHEDSIVLQSVFTNAKARIETD---GEDKQQEADEEAG 1402          

BLAST of homeotic gene vs. nr
Match: gi|1069676195|ref|XP_018300426.1| (PREDICTED: ATP-dependent helicase brm isoform X1 [Trachymyrmex zeteki])

HSP 1 Score: 1596.64 bits (4133), Expect = 0.000e+0
Identity = 833/1331 (62.58%), Postives = 1024/1331 (76.93%), Query Frame = 0

Query:   65 DLQKLQNSINQMEERGMQNDPRYNQARQLHQNMMSRQGPPPGAPGAPPGAGPPGGPAGPPGQDKGQFQNPQMLQLRAQIMAYRFLARNQPLPPQIAMAVSGKRPEGQGPPGAPPYGPSRPGGPPG-SASPGGPPNMQAPAPGGRGPTPNTTGPTGGT-PGVAPT----------GKPNRVTPVAKPAGIDPITLLQERENRLAARVAHRIDELSNLPVSMADDTRTKAEIELRALRLLNFQRQLRAEVVACTRRDTTLETAINVKAYKRTKRQGLREARATEKLEKQQRLEAERRRRQKHQEYLNAVLTHGRDLQNFHRNNLGKIQKLNKAVLNWHANHEREQKKEQERIEKERLRRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYINQLTDMVKQHKVEQ----VQKQKELRKKAKLEEQAGAMLDESSQMSDVRVHVKELSTGKIIRGDNAPLASELESWLEKNPGFEQVP-------------------RDEDSDDSDGEEKPETTSSAEAILAKAKEEATKEDEGDGVDYYTIAHTISEEITEQAPMLVGGKLKEYQVKGLEWLVSLYNNCLNGILADEMGLGKTIQTIALITYLMERKKNMGPYLIIVPLSTLSNWALEFEKWAPACNVVSYKGSPAARRTAQNAMRGSKFNVLVTTYEYVIKDKAMLSKIRWKYMIIDEGHRMKNHHCKLTQILNTFYTSNNRLLLTGTPLQNKLPELWALLNFLLPSIFKACNTFEQWFNAPFAITGEKVELNEEETILIIRRLHKVLRPFLLRRLKKDVESQLPDKVEYIVKCEMSGLQRTLYNHMQEKGVMKTD---KINKGKKGAKALMNTIMQLRKLCNHPFMYQPIEEAYAKHIGM-PTDIVTGPDVYRSSGKFELIDRILPKLKATGHRVLMFCQMTQCMTIIEDYFNYRGFKFLRLDGMTKSEDRADMLKIFNEKASDYFIFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARFKLNMDEKVIQAGRFNNRSTGSERRELLQSIL-RADEEEEEENEVPDDEVINQMIARSEDEFEKFTQMDLDRRREEAALGPNRKDRLIQIKELPEFLLAEDDDDDE---EEEEEIVYGRGSRAKKETNYNDQLSDKEWLKVIGAEDEEFDDDDEDDEEIKKPGKRVKRKKREDEEVEDEFANQNRKKKKSSAK----RLQKKMATLMQIVVQYKD-QDERVLSEPFMKLPSKKELPDYYEVIKRPVDIARIMNKIADGKYEDVDAMEKDFVLMCANTQKYNEDGSLIYEDSIVLQSVFTNARERLD 1347
            +L  LQ +I+ MEE+G+Q DPRY+Q   L     +RQG          G G           DK  F + Q+ QLRAQIMAYR LARNQ +P Q+A+A  G         GAPP        PPG S  P  P        G + P PN  GPTG   PG               K NRVT VAKP G+DP+ +LQERENR+AAR++ R+++L+NLP +M +D R +A+IELR LR+LNFQRQLR+E++ACTR+DTTLETA+NVKAYKRTKRQGLREARATEKLEKQQ+LEAER+RRQKHQE+L++VL HG+D + FHRNN+ K+ +LNKAVLN+HAN EREQKKEQERIEKER+RRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYI+ LT+MVKQHK+EQ    V++QK  +KK KL++   A  ++     D R+ V E++TG+ + GD APL S+L ++LE +PG+E +                    +D+   DS+ E+  +T   A     K +++  K +E     YY+IAHT+ E +TEQA ++V G LKEYQ+KGLEWLVSL+NN LNGILADEMGLGKTIQTIAL+TYLME+KK  GP+LIIVPLSTLSNW LEFEKWAP+  VVSYKGSPA RRT Q+ MR +KFNVL+TTYEYVIKDK +L+K++WKYMIIDEGHRMKNHHCKLTQ+LNT Y + +RLLLTGTPLQNKLPELWALLNFLLPSIFK+C+TFEQWFNAPFA TGEKVELNEEETILIIRRLHKVLRPFLLRRLKK+VESQLPDKVEYI+KC+MSGLQ+ LY HMQ KGV+ TD   K  +GK GAKALMNTI+QLRKLCNHPFM+Q IEE Y +H+G   + ++TGPD+YR+SGKFEL+DRILPKLKAT HRVL+FCQMTQ MTI+EDY ++RGF +LRLDG TK+EDR D+LK FN+  S+YF+FLLSTRAGGLGLNLQ ADTV+IFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAAR+KLNMDEKVIQAG F+ +STGSER++ LQSIL + D ++EEENEVPDDE +NQMIAR+E EFE F ++DL+RRREEA LGPNRK RL++  ELP++L+ +DD+ +    EE+E+   GRGSR +KE +Y D L++KEWLK I  +  E+++++EDD++ KK  KR K+ + +DE +         KK++ +      ++++ M  L+ +VV Y D  D R+LSEPFMKLPS++ELPDYYE+IK+P+ I +++ KI +GKY D+D +EKDF+ +C N Q YNE+ SLI+EDSIVLQSVFTNAR+RL+
Sbjct:  735 NLNALQKAIDSMEEKGLQEDPRYSQLLALR----ARQGS---------GMG-----------DKQAFNSQQLQQLRAQIMAYRLLARNQAVPQQVALAAQG---------GAPP--------PPGMSQRPIDPSQGPVTTSGPQIPGPNVIGPTGAPRPGCQTPQQQQQQPQSGAKANRVTSVAKPVGLDPLLILQERENRVAARISLRMEQLTNLPTNMPEDLRIQAQIELRMLRVLNFQRQLRSEIIACTRKDTTLETAVNVKAYKRTKRQGLREARATEKLEKQQKLEAERKRRQKHQEFLSSVLQHGKDFKEFHRNNVAKLARLNKAVLNYHANAEREQKKEQERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYISNLTEMVKQHKIEQKRKQVEEQKRKKKKKKLQDSENA--EDGGANDDTRIGVIEIATGRTLIGDEAPLMSQLSAFLEAHPGWEPIESDSEEDEEDDEEENGESESKDKSMGDSEEEKVKKTIHKA-----KVEDDEYKTEE---QTYYSIAHTVHEVVTEQASIMVNGMLKEYQIKGLEWLVSLFNNNLNGILADEMGLGKTIQTIALVTYLMEKKKVNGPFLIIVPLSTLSNWVLEFEKWAPSVVVVSYKGSPAGRRTIQSQMRATKFNVLLTTYEYVIKDKGVLAKLQWKYMIIDEGHRMKNHHCKLTQVLNTHYLAPHRLLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYKHMQSKGVLLTDGSEKGKQGKGGAKALMNTIVQLRKLCNHPFMFQAIEEKYCEHVGTQGSGVITGPDLYRASGKFELLDRILPKLKATNHRVLLFCQMTQLMTIMEDYLSWRGFMYLRLDGTTKAEDRGDLLKKFNDPGSEYFLFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERQQFLQSILHQDDADDEEENEVPDDETVNQMIARTEGEFEIFQKLDLERRREEAKLGPNRKSRLLEEAELPDWLVKDDDEVERWTYEEDEDRFLGRGSRQRKEVDYTDSLTEKEWLKAIDDDGAEYEEEEEDDKKKKKTRKRKKKSEEDDEPMP--------KKRRGAGSLVDPKMKRAMKKLITLVVNYTDSSDGRLLSEPFMKLPSRRELPDYYEIIKKPLTINKLLQKIEEGKYADLDELEKDFMQLCKNAQIYNEEASLIHEDSIVLQSVFTNARQRLE 2006