28s ribosomal protein mitochondrial, maker-scaffold49_size462716-snap-gene-1.22 (gene) Tigriopus kingsejongensis

Overview


Name	28s ribosomal protein mitochondrial
Unique Name	maker-scaffold49_size462716-snap-gene-1.22
Type	gene
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of 28s ribosomal protein mitochondrial vs. L. salmonis genes
Match: EMLSAG00000003079 (supercontig:LSalAtl2s:LSalAtl2s173:1474170:1479971:1 gene:EMLSAG00000003079 transcript:EMLSAT00000003079 description:"maker-LSalAtl2s173-augustus-gene-14.29")

HSP 1 Score: 184.111 bits (466), Expect = 2.255e-49
Identity = 149/494 (30.16%), Postives = 232/494 (46.96%), Query Frame = 0

Query:   23 GRALHG---PPIREEYRSEPVYPPIKTFRNT-DEEELANLKDTLHSLKTVEEKQYYLNKPKYFGWPSYQLSPRFISYGSLEFIQAMTDTRLVEG--WPDSYQPTETMAQDLARVLAPKLARVIQDCEKVVSRMQVPNDRIYGHESHAYPKDESRIDMIEWKLQQRLRVINRFF-LNHLLGPAPHLLGVQVDHDPRVEAFWFRSGMDPDVSLIRKRKGLVKYLKKVKRPPWSTAMKPSEDYPQQPGDQVMQSKANPHLVHRHPGMIAPFIGQDHDLC----QNPDQVPTFTLAPRTLGYIKSSKAGVNLPGCWTGSNNIHASLLLLSPVNVIDYRQVSQTIHEEQFGH---RQDMLASKLILTGFTQLLAQACFLGYEPMNNVQEPLATQAVVTDGLKWKLAAYQLNRTALL----DEAGIKHPNNVCWQTPEQDLFKSNEETGQSEINLELLTQIIQVYLRTPDLLPTKTA------KCLHDIQNDYNRNYFFK 492
             R  HG   PP    Y  +P YPP+  + ++  + E   +   + SL TVEEK YYLN PKY+GW S  +   F+ YGSL+F +  T + +V+G   P S+      ++D  R+    L  +++          VP   + G +       E R D I++  Q  L  +N    L+ +L    +      D + R+EAFWF+ G DPD  ++RKR+G VK   ++KR      ++   D   +  D+ M     P +  R+P  +  F+  D + C    Q+  +   F   P++LGY      G N+P  WTGS N   ++  LS +N         +  E+   H    ++ L  K I   F   L+ + + G+ P NN   P++T+  V DG    L+ YQLNRT L     DE G +   N  W +P ++L+  + E   S IN +LL  +I +YL   D+    T       K +H I++ Y+R YF+K
Sbjct:   10 SRCFHGVAPPPEESVYSKKPEYPPLPKYPDSMYKTEKDKVICKMRSLDTVEEKAYYLNLPKYYGWFSVNIQEDFVRYGSLKFAKCATASDVVDGENLPVSH------SEDSKRITTESLD-ILKTYINSYRNSTVPPYSVRGDDV------EERKDFIKYN-QGELSKLNFLSGLDRILSIITNNTSA-TDLNARLEAFWFKGGFDPDALMVRKRRGDVK--SRIKRNILKGTIEDHHDIIYESYDRPMAYIGCPLITKRNPYFLPSFL--DMEQCRREFQSYKEAEEFFHDPKSLGYPYKHVHGRNIPCVWTGSKNPCLNISYLSSLNRFKKSTSESSFSEDIAEHMTPNEEALI-KSIFHSFAATLSSSTYFGFTPFNNPTYPISTRXAVFDGQSMALSVYQLNRTELHQTQDDEEG-RDLRNKLWFSPYRELYTLDSEGSLSHINEDLLQDLISIYLEKGDVSKEHTPYLHPQYKYIHQIKSAYDREYFWK 482

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BLAST of 28s ribosomal protein mitochondrial vs. SwissProt
Match: gi|145559524|sp|P82924.4|RT30_BOVIN (RecName: Full=28S ribosomal protein S30, mitochondrial; Short=MRP-S30; Short=S30mt)

HSP 1 Score: 69.3218 bits (168), Expect = 2.765e-11
Identity = 105/448 (23.44%), Postives = 177/448 (39.51%), Query Frame = 0

Query:   33 EEYRSEPV--YPPIKTFRNTD-----EEELANLKDTLHSLKTVEEKQYYLNKPKYFGWPSYQLSPRFISYGSLEFIQAMTDTRLVEGWPD-SYQPTETMAQ--DLARVLAPKLARVIQDCEKVVSRMQVPNDRIYGHESHAYPKDESRIDMIEWKLQQRLRVINRFFLNHLLGPAPHLLGVQVDHDPRVEAFWFRSGMDPDVSLIRKRKGLVKYLKKVKRPPWSTAMKPSEDYPQQPGDQVMQSKANPHLVHRHPGMIAPFIGQDHDLCQNPDQVPTFTLAPRTLGYIKSSKAGVNLPGCWTGSNNIHASLLLLSPVNVIDYRQVSQTIHEE-QFGHRQDMLASKLILTGFTQLLAQACFLGYEPMNNVQEPLATQAVVTDGLKWKLAAYQLNRTALLDEAGIKHP-NNVCWQTPEQDLFKSNEETGQSEINLELLTQIIQVYLRTPD 468
             + ++ PV  YPPI      D     +  +   + T+H+ K+V+EK   L K ++  +  Y   P+  +  +  + Q+ T T  + G P    QP    AQ  DLA + A     ++Q+   +  + + P   IY      Y      +D +   L   L   N           P L    +D +  V  +W R     ++     RKG V  ++                   +P +Q+  S+  P  V   P   +  +      C+ PD++P F        +I +  A    P C+ G    H     L P  +   R + Q   ++ +   R + +AS    TG     AQA + G+    +V  P  +Q V+TDG  +    YQLN  AL  +A   +P  N+CW T    L+++ E+      N ++L Q++   L  P+
Sbjct:   34 SDVKAAPVARYPPIVASLTADSKAARQRRVERWQATVHAAKSVDEKLRILTKMQFMKYVVY---PQTFALNADRWYQSFTKTVFLSGLPPPQAQPDREPAQVVDLAALRAAVCDCLLQEHFFLRRKKRAP---IYQER---YAVASPFLDQLVPSLTGLLSAYN-----------PVLAAAALDCNRPVHFYWLRGE---EIIPGGHRKGRVDAVRY--------------QINDKPHNQIRISRQLPEFV---PLDYSVPVEVPVKNCK-PDKLPLFKRQYENAIFIGTKTAD---PLCY-GHTQFH-----LLPDKLKRERLLKQNCADQIEVIFRANAIASLFAWTG-----AQAMYQGFWSEADVTRPFVSQGVITDGKYFSFFCYQLNTLALTAQADQNNPRKNICWGTQSMPLYETIEDNDVKGFNDDVLLQLVHFLLNRPE 426

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BLAST of 28s ribosomal protein mitochondrial vs. SwissProt
Match: gi|116242771|sp|Q9NP92.2|RT30_HUMAN (RecName: Full=39S ribosomal protein S30, mitochondrial; Short=MRP-S30; Short=S30mt; AltName: Full=Mitochondrial large ribosomal subunit protein mL65; AltName: Full=Mitochondrial large ribosomal subunit protein mS30; AltName: Full=Programmed cell death protein 9)

HSP 1 Score: 66.2402 bits (160), Expect = 2.418e-10
Identity = 54/196 (27.55%), Postives = 84/196 (42.86%), Query Frame = 0

Query:  280 IAPFIGQDHDLCQNPDQVPTFTLAPRTLGYIKSSKAGVNLPG------CWTGSNNIHASLLLLSPVNVIDYRQVSQTIHEE-QFGHRQDMLASKLILTGFTQLLAQACFLGYEPMNNVQEPLATQAVVTDGLKWKLAAYQLNRTALLDEAGIKHP-NNVCWQTPEQDLFKSNEETGQSEINLELLTQIIQVYLRTP 467
            +A F+  D+ +   P ++PT    P  L   K         G      C  G    H     L P  +   R + Q   ++ +   R + +AS    TG     AQA + G+    +V  P  +QAV+TDG  +    YQLN  AL  +A   +P  N+CW T  + L+++ E+      N ++L QI+   L  P
Sbjct:  247 LAEFVPLDYSV---PIEIPTIKCKPDKLPLFKRQYENHIFVGSKTADPCCYGHTQFH-----LLPDKLRRERLLRQNCADQIEVVFRANAIASLFAWTG-----AQAMYQGFWSEADVTRPFVSQAVITDGKYFSFFCYQLNTLALTTQADQNNPRKNICWGTQSKPLYETIEDNDVKGFNDDVLLQIVHFLLNRP 429

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BLAST of 28s ribosomal protein mitochondrial vs. SwissProt
Match: gi|24212381|sp|Q9D0G0.1|RT30_MOUSE (RecName: Full=28S ribosomal protein S30, mitochondrial; Short=MRP-S30; Short=S30mt)

HSP 1 Score: 66.2402 bits (160), Expect = 2.642e-10
Identity = 106/457 (23.19%), Postives = 172/457 (37.64%), Query Frame = 0

Query:   29 PPIRE-EYRSEPV--YPPIKTFRNTD-----EEELANLKDTLHSLKTVEEKQYYLNKPKYFGWPSYQLSPRFISYGSLEFIQAMTDTRLVEGWPDSYQPTETMAQ-DLARVLAPKLARVIQDCEKVVSRMQVPNDRIYGHESHAYPKDESRIDMIEWKLQQRLRVINRFFLNHLLGPA-PHLLGVQVDHDPRVEAFWFRSGMDPDVSLIRKRKGLVKYLKKVKRPPWSTAMKPSEDYPQQPGDQVMQSKANPHLVHRHPGMIAPFIGQDHDLCQNPDQVPTFTLAPRTLGYIKSSKAGVNLPG------CWTGSNNIHASLLLLSPVNVIDYRQVSQTIHEE-QFGHRQDMLASKLILTGFTQLLAQACFLGYEPMNNVQEPLATQAVVTDGLKWKLAAYQLNRTALLDEAGIKHP-NNVCWQTPEQDLFKSNEETGQSEINLELLTQIIQVYLRTP 467
            P +R+ E  + PV  YPPI      D     +  +   + T+H+  +V+EK   L K ++     Y + P+  +  +  + Q+ T T  V G P +   +      DLA + A      + DC        +  +++Y          + R  +    L Q +R      L +LL P  P L    +D    V+ +W R            RKG +  L+                   +P +Q+  SK  P            F+  D+ +   P ++P     P  L   +         G      C  G    H     L P  +   R + Q   E+ +   R + +AS    TG     AQA + G+    +V  P  +QAV+TDG  +    YQLN  AL  +A   +P  N+CW +  Q L+++ E+      +   L QI+   L  P
Sbjct:   29 PEVRDLEVVATPVARYPPIVASMTADSKAARQRRVQRWQATVHAAPSVDEKIRILTKMQF---KKYVVHPQISALNADRWYQSFTKTVFVSGLPPAPALSPPPPSLDLAALRA-----AVCDC--------ILQEQVYVRRRRPRSLFDRRQALASSILDQVVRT-----LVNLLAPLNPVLSTAALDCKRSVDFYWLRGEERIPAG---HRKGHIDALRY--------------QINDKPHNQIRISKQLPE-----------FVPLDYSI---PTEIPVMKCKPDKLPLFRRQYENSIFTGSKTADPCCYGHTQFH-----LIPDRLKRERLIRQNQAEQVEAVFRANAIASLFAWTG-----AQAMYQGFWSEADVTRPFVSQAVITDGKYFSFFCYQLNTLALTVQADQNNPRKNLCWGSQSQPLYETVEDNDVKGFDDGTLLQIVHFLLNKP 423

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BLAST of 28s ribosomal protein mitochondrial vs. nr
Match: gi|1325304943|ref|XP_023334071.1| (39S ribosomal protein S30, mitochondrial-like [Eurytemora affinis])

HSP 1 Score: 256.144 bits (653), Expect = 2.220e-73
Identity = 174/548 (31.75%), Postives = 265/548 (48.36%), Query Frame = 0

Query:   24 RALHGPPIREEYRSEPVYPPIKTFRNTDEEELANLKDTLHSLKTVEEKQYYLNKPKYFGWPSYQLSPRFISYGSLEFIQAMTDTRLVEGWPDSY--QPTETMAQDLARVLAPKLARVIQDCEKVVSRMQ-VPNDRIYGHESHAYPKDESRIDMIEWKLQQRL-RVINRFFLNHLLGPAPHLLGVQVDHDPRVEAFWFRSGMDPDVSLIRKRKGLVKYLKKVKRPPWSTAMKPSEDYPQQPGDQVMQSKANPHLVHRHPGMIAPFIGQDHDLCQNPDQVPTFTLAPRTLGYIKSSKAGVNLPGCWTGSNNIHASLLLLSPVNVIDYRQV-SQTIHEEQFGHRQDMLASKLILTGFTQLLAQACFLGYEPMNNVQEPLATQAVVTDGLKWKLAAYQLNRTALLDEAGIKHPN-NVCWQTPEQDLFKSNEETGQSEINLELLTQIIQVYLRTPDLLPTKTAKCLHDIQ------NDYNRNYFFKEYRTLCSRRLPALQKRKPIILPHEQLFKIRHKEQMFMDGNRDRPWFQMARTDFLGKEHWHPEFKHLD 559
            R LHGP   +EY    +YPPI  +R  DE+  A  +D +    TVEEK Y +N+PKY+GW SY + P  I    L+F +  T T + +G P+ +  Q  +T A+ +   +AP +  V++D  +     + V ND+I   E  A   D       E    + L + I+    +HL    PH+     D+D R EAFWFR G+ PD S+++KR+G  K L K +        +  ++  ++P ++ +Q K N  +  RH   ++ F+ +D  LC N   VP     PR  G     + G N+PG W    N        + VNV +++ +    +  E+    QD+  SK ILT F   L QAC+LG+ P+ ++  PL +Q++ TDG KW   AYQ+N   L       H + N+ W      L+   E+      N + L  +I+++L  P          L  I       ++Y R  F +  R   S R   +Q  KP +   E+L  + +K    +  +R RPW+ M   DFLGKEHWHPEF + D
Sbjct:   24 RLLHGPQRVDEYSETAMYPPISRYRTDDEKSAAKARDLVRECDTVEEKMYQINRPKYYGWWSYIMQPDKIPADLLDFTKFSTWTHVEQGLPEYFHNQVLDTQAKSILAEVAPLIEMVVRDESQFREIGKYVTNDKIRFSEKFANTADSWAAYTKENIFSRNLVKKIHEVLYSHLSSSHPHIRDSVEDYDARNEAFWFRGGIQPDKSMLKKREGTKKMLDKHRARVSYQVKEFGDEKVKEPYERALQIKHNSVVQVRHENPLSEFVSRDSALCTNI-SVPIVDYDPRCYGLRTVCQHGTNIPGYWPEEPNQMGLFSYHTRVNVFNHKSLGGHKVITEEVEREQDI--SKGILTNFAWCLPQACYLGFSPLTDLTFPLVSQSMNTDGRKWSYFAYQMNTCDLSHNNMSDHTHQNILWSADPVLLYDKVEDGKVFNYNPDSLLPLIKMFLNKPRSREYSMTPYLGKIGKLVNHPDNYQRKRFMEIIRNQFSNRPKTVQ--KPEMYLWEKLLLVDNKSMPQLALDRRRPWWHMKNIDFLGKEHWHPEFVNTD 566

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BLAST of 28s ribosomal protein mitochondrial vs. nr
Match: gi|1070599380|ref|XP_018397012.1| (PREDICTED: 28S ribosomal protein S30, mitochondrial [Cyphomyrmex costatus] >gi|1009378078|gb|KYN01327.1| 28S ribosomal protein S30, mitochondrial [Cyphomyrmex costatus])

HSP 1 Score: 224.557 bits (571), Expect = 4.150e-62
Identity = 180/572 (31.47%), Postives = 277/572 (48.43%), Query Frame = 0

Query:   38 EPVYPPIK--TFRNTDEEELANLKDTLHSLKTVEEKQYYLNKPKYFGWPSYQLSPRFISYGSLEFIQAMTDTRLVE--GWPDSYQPTETMAQDLARVLAPKLARVIQDCEKVVSRMQVPNDRIYGHESHAYPKDES------RIDMIEWKLQQRLRVINRFFLNHLLGPAPHLLGVQVDHDPRVEAFWFRSGMDPDVSLIRKRKGLVKYLKKVKRPPWSTAMKPSEDYPQQPGDQVMQSKANPHLVHRHP-GMIAPFIGQDHDLCQNPD-QVPTFTLAPRTLGYIKSSKAGVNLPGCWTGSNNIHASLLLLSPVNVIDYRQVSQTIHEEQFGHRQDMLASKLILTGFTQLLAQACFLGYEPMNNVQEPLATQAVVTDGLKWKLAAYQLNRTALLDEAGIKHPN-NVCWQTPEQDLFKSNEETGQSEINLELLTQIIQVYLRTP------DLLP--TKTAKCLHDIQNDYNRNYFFKEYRTLCSRRLPALQKRKPIILPHEQLFKIRHKEQMFMDGNRDRPWFQMARTDFLGKEHWHPEFKHLDHYDPYYKPRKFRSHKKDR---TWKKVVAP 585
            EP+YP IK  +F+   ++      D + +L+TVEEKQ+ +N P+Y+GW S  L+  FI Y +L   Q  T T +V+  G P +Y  T    + L R++      +  D E  +        R +  ++  +P DE+      +++M E   +  +  INR  L HL    PHLL  +VD +PR+EA WF  G++P  + ++K +  VK++K+    P +  +       Q  G  +M      HL H+HP   I P        C+NP  +VPTF L P+ L Y    K   N+PG W G  N      LLS  N   Y Q       E++      L  + +L  ++ LL+QAC+ G+   N++  PL TQ ++T+G  W    YQLN T +  E   ++P  N+CW T    LF   E      +N E+L  +I+ Y+  P      DL P   K+AK + DI++D  RN+  K+Y+ L + R     +R P I   ++++ I+HK +  MD  R+ PW      +F  K +     + LD + P Y PR+ R + K R    W K   P
Sbjct:   39 EPIYPSIKDLSFKAKFKKYRQAWYDEIKNLETVEEKQFKINMPRYYGWKSLILNEHFIPYDALSHAQYFTRTHIVKESGLP-AYYSTLISIEQLDRIVQ----SIKSDIEDNIVFEHCTRRREHEMKADKFPLDENIKAIDRKVNMEEIISKALIHRINRTMLIHLSSENPHLLHTEVDFEPRLEASWFMGGLNPP-NFVKKFRNSVKFMKEFVDDPVNLPV-------QYIGQPIM------HLRHKHPLREIIPLSD-----CENPAFEVPTFKLNPKVLSYTLEKKHLTNIPGFWPGDEN---EFGLLSYHNCT-YLQT----RPEKYNDTSTALMVQAVLASYSWLLSQACYQGFSTFNDITYPLTTQTIITNGQWWSFFVYQLNTTLVHSEYADENPKRNICWITEPIKLFDKIENEKVYGLNEEVLKTLIKFYINIPEERVGIDLKPYLGKSAKVIADIEHDERRNWMEKQYKHLVTNR--PRHRRIPEIYDWQKIYIIKHKTRP-MDKKRE-PW------EFGIKMY----KRKLDDHQPPYIPRRLRQNPKKRHIGRWSKTYYP 564

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BLAST of 28s ribosomal protein mitochondrial vs. nr
Match: gi|1070157813|ref|XP_018359570.1| (PREDICTED: 28S ribosomal protein S30, mitochondrial [Trachymyrmex cornetzi] >gi|1070157817|ref|XP_018359571.1| PREDICTED: 28S ribosomal protein S30, mitochondrial [Trachymyrmex cornetzi] >gi|1009403531|gb|KYN23064.1| 28S ribosomal protein S30, mitochondrial [Trachymyrmex cornetzi])

HSP 1 Score: 212.231 bits (539), Expect = 1.442e-57
Identity = 177/572 (30.94%), Postives = 269/572 (47.03%), Query Frame = 0

Query:   38 EPVYPPIK--TFRNTDEEELANLKDTLHSLKTVEEKQYYLNKPKYFGWPSYQLSPRFISYGSLEFIQAMTDTRLVE--GWPDSYQPTETMAQDLARVLAPKLARVIQDCEKVVSRMQVPNDRIYGHESHAYPKDES------RIDMIEWKLQQRLRVINRFFLNHLLGPAPHLLGVQVDHDPRVEAFWFRSGMDPDVSLIRKRKGLVKYLKKVKRPPWSTAMKPSEDYPQQPGDQVMQSKANPHLVHRHP-GMIAPFIGQDHDLCQNPD-QVPTFTLAPRTLGYIKSSKAGVNLPGCWTGSNNIHASLLLLSPVNVIDYRQVSQTIHEEQFGHRQDMLASKLILTGFTQLLAQACFLGYEPMNNVQEPLATQAVVTDGLKWKLAAYQLNRTALLDE-AGIKHPNNVCWQTPEQDLFKSNEETGQSEINLELLTQIIQVYLRTPD------LLP--TKTAKCLHDIQNDYNRNYFFKEYRTLCSRRLPALQKRKPIILPHEQLFKIRHKEQMFMDGNRDRPWFQMARTDFLGKEHWHPEFKHLDHYDPYYKPRKFRSHKKDRT---WKKVVAP 585
            EP+YP I+  +F+   + +     + + SL+TVEEK + +N P+Y+GW S  L    + Y SL   Q  T T +V+  G P  Y    ++ Q     L   +  +  D E  +        R +  ++  +P DE+      +I+M E   +  +  INR  L HL    PHLL  +VD +PR+EA WF  G++P  + +R  +  VK+LKK         +  S + P Q   Q +      HL H+HP   I P        C+N   +VPTF L P+ L Y    K   N+PG W G  N      LLS  N   Y Q       E++      L  + IL  ++ LL+QAC+ G+   N++  PL TQ ++T+G  W    YQLN T +  E A      N+CW T    LF   E      +N E+L  +I+ Y+  P+      L P   K+ K + DI++D  RN+  K+Y+ L + R     +R P I   ++++ I+HK +  MD  R+ PW      +F  K +     + LD + P Y PR+ R++ K R+   W K   P
Sbjct:   39 EPIYPSIEDISFKAKCKRKRQAWHEEIKSLETVEEKLFKINMPRYYGWKSLILKEHVVPYNSLSHAQYFTRTHIVKEFGLPAYYNTVISIEQ-----LDKIVQSIKSDIEDNIIFEHCIRRREHEIKADKFPLDENIKTLDRKINMEEIISKSLIHRINRTMLIHLTSENPHLLHTEVDFEPRLEASWFMGGINPP-NFVRNFRKSVKFLKKF--------VDDSVNLPVQYFGQPV-----VHLRHKHPLRQIIPLSD-----CENSALEVPTFKLNPKVLNYTFEKKHLTNIPGFWPGDEN---EFGLLSYHNC-TYLQT----RPEKYNDTSTALTIQAILASYSWLLSQACYQGFSTFNDITYPLTTQTIITNGQWWSFFVYQLNTTLVHSEYADENSKRNICWITEPIKLFDKIENEKVHGLNEEVLKTLIKFYMNIPEERVGVNLKPYLGKSVKVIADIEHDERRNWLEKQYKHLVANR--PRHRRIPEIYDWQKIYIIKHKTRP-MDKKRE-PW------EFGIKMY----KRTLDDHQPAYIPRRLRANPKKRSIGRWAKTFYP 564

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BLAST of 28s ribosomal protein mitochondrial vs. nr
Match: gi|1069709091|ref|XP_018312317.1| (PREDICTED: 28S ribosomal protein S30, mitochondrial [Trachymyrmex zeteki] >gi|1069709094|ref|XP_018312318.1| PREDICTED: 28S ribosomal protein S30, mitochondrial [Trachymyrmex zeteki] >gi|1012974858|gb|KYQ49130.1| 28S ribosomal protein S30, mitochondrial [Trachymyrmex zeteki])

HSP 1 Score: 207.994 bits (528), Expect = 6.093e-56
Identity = 172/576 (29.86%), Postives = 270/576 (46.88%), Query Frame = 0

Query:   24 RALHGPPIREEYRSEPVYPPIK--TFRNTDEEELANLKDTLHSLKTVEEKQYYLNKPKYFGWPSYQLSPRFISYGSLEFIQAMTDTRLVE--GWPDSYQPTETMAQDLARVLAPKLARVIQDCEKVVSRMQVPNDRIYGHESHAYPKDES------RIDMIEWKLQQRLRVINRFFLNHLLGPAPHLLGVQVDHDPRVEAFWFRSGMDPDVSLIRKRKGLVKYLKKVKRPPWSTAMKPSEDYP-QQPGDQVMQSKANPHLVHRHP-GMIAPFIGQDHDLCQNPD-QVPTFTLAPRTLGYIKSSKAGVNLPGCWTGSNNIHASLLLLSPVNVIDYRQVSQTIHEEQFGHRQDMLASKLILTGFTQLLAQACFLGYEPMNNVQEPLATQAVVTDGLKWKLAAYQLNRTALLDEAGIKHPN-NVCWQTPEQDLFKSNEETGQSEINLELLTQIIQVYLRTP------DLLP--TKTAKCLHDIQNDYNRNYFFKEYRTLCSRRLPALQKRKPIILPHEQLFKIRHKEQMFMDGNRDRPWFQMARTDFLGKEHWHPEFKHLDHYDPYYKPRKFRSHKKDR 577
            R    P + E    E +YPPI+  +F+   + +     + + +L+TVEEK + +N P+Y+GW S  L    + Y SL   Q  T T +V+  G P  Y    ++ Q     L   +  +  D E  +        R +  +   +P DE+      +I+M E   +  ++ INR  L HL    PHLL  ++D +PR+EA WF  G++P  + +R  +  +K+LK+         +  S D P Q  G  VM      HL  +HP   I P        C+NPD +VPTF L P+ L Y    K   N+PG W G  N       LS  N   Y Q       E++      L  + I+  ++ LL+QAC+ G+   N++  PL TQ ++T+G  W    YQLN T +  E   ++P  N+CW T    LF   E      +N E+L  +I+ Y+  P      +L P   K+ K + DI+++  RN+  K+Y+ L + R     +R P I   ++++ I+HK +  MD  R+ PW      +F  K +     + LD + P Y P+  R + K +
Sbjct:   21 RKYSTPAVSEFNSIESIYPPIEDMSFKAKYKRKRQAWYEEIKNLETVEEKLFKINMPRYYGWKSLILKEHVVPYNSLSHAQYFTRTHIVKESGLPAYYNTVISIEQ-----LDKIVQSIKSDIEDNIIFEHCIRRREHEMKVDKFPLDENIKALDRKINMEEIISKALIQRINRTVLIHLASENPHLLQTEIDFEPRLEASWFMGGLNPP-NFVRNFRKSIKFLKEF--------VDDSVDLPVQYIGQPVM------HLRCKHPLRQIIPLSD-----CENPDLEVPTFKLNPKMLTYALEKKHLTNIPGFWPGDEN---EFGFLSYHNCT-YLQT----RPEKYNDTSTALTVQAIMASYSWLLSQACYQGFSTFNDITYPLTTQTIITNGQWWSFFVYQLNTTLVHSEYADENPKRNICWVTEPMKLFDKIENEKVHGLNEEVLKTLIKFYMNIPEERIGVELKPYLGKSVKVIADIEHNERRNWLEKQYKHLVANR--PRHRRIPEIYDWQKIYIIKHKTRP-MDKKRE-PW------EFGIKMY----KRTLDDHQPTYIPKCLRENPKKK 549

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BLAST of 28s ribosomal protein mitochondrial vs. nr
Match: gi|746866005|ref|XP_011064049.1| (PREDICTED: 28S ribosomal protein S30, mitochondrial [Acromyrmex echinatior] >gi|332018959|gb|EGI59501.1| 28S ribosomal protein S30, mitochondrial [Acromyrmex echinatior])

HSP 1 Score: 207.223 bits (526), Expect = 1.055e-55
Identity = 175/572 (30.59%), Postives = 270/572 (47.20%), Query Frame = 0

Query:   38 EPVYPPIK--TFRNTDEEELANLKDTLHSLKTVEEKQYYLNKPKYFGWPSYQLSPRFISYGSLEFIQAMTDTRLVE--GWPDSYQPTETMAQDLARVLAPKLARVIQDCEKVVSRMQVPNDRIYGHESHAYPKDES------RIDMIEWKLQQRLRVINRFFLNHLLGPAPHLLGVQVDHDPRVEAFWFRSGMDPDVSLIRKRKGLVKYLKKVKRPPWSTAMKPSEDYPQQPGDQVMQSKANPHLVHRHP-GMIAPFIGQDHDLCQNPD-QVPTFTLAPRTLGYIKSSKAGVNLPGCWTGSNNIHASLLLLSPVNVIDYRQVSQTIHEEQFGHRQDMLASKLILTGFTQLLAQACFLGYEPMNNVQEPLATQAVVTDGLKWKLAAYQLNRTALLDEAGIKH-PNNVCWQTPEQDLFKSNEETGQSEINLELLTQIIQVYLRTP------DLLP--TKTAKCLHDIQNDYNRNYFFKEYRTLCSRRLPALQKRKPIILPHEQLFKIRHKEQMFMDGNRDRPWFQMARTDFLGKEHWHPEFKHLDHYDPYYKPRKFRSHKKDRT---WKKVVAP 585
            EP+YP I+  +F+   + +     + + SL+TVEEK + +N P+Y+GW S  L    I Y SL   Q  T T +V+  G P +Y  T    + L R++      +  D E  +        R +  ++  +P DE+      +I+M +   +  +  INR  L HL    PHLL  +VD +PR+EA WF  G++P  + +R  +  VK+LK+         +  S + P Q   Q +      HL H+HP   I P        C+N   +VPTF L P+ L Y    K   N+PG W G  N       LS  N   Y Q       E++      L  + +L  ++ LL+QAC+ G+   N++  PL TQ ++T+G  W    YQLN T +  E   ++   N+CW T    LF   E      +N E+L  +I+ Y+  P      +L P   K+ K + DI++D  RN+  K+Y+ L + R     +R P I   ++++ IRHK +  MD  R+ PW      +F  K +     + LD + P Y PR+ R++ K R    W K   P
Sbjct:   39 EPIYPSIENISFKAKCKRKRQAWHEKIKSLETVEEKLFKINMPRYYGWKSLILKEHVIPYNSLSHAQYFTRTHIVKEFGLP-AYYNTVISTEQLDRIVQS----IKSDIEDNIIFEYCIRRREHEIKADKFPLDENIKASDRKINMEKIISKALIHRINRTMLIHLTSENPHLLHTEVDFEPRLEASWFMGGLNPP-NFVRNFRKSVKFLKEF--------VDDSVNLPVQYFGQPV-----VHLRHKHPLRQIIPLSD-----CENSALEVPTFKLNPKVLTYTLEKKHLTNIPGFWPGDEN---EFGFLSYHNCT-YLQT----RPEKYNDTSAALTIQAVLASYSWLLSQACYQGFSTFNDITYPLTTQTIITNGQWWSFFVYQLNTTLVHSEYADENLKRNICWITEPIKLFDKIENDKVHGLNEEVLKTLIKFYMNIPEERVGVNLKPYLGKSVKVIADIEHDERRNWLEKQYKHLVANR--PRHRRIPEIYDWQKIYIIRHKTRP-MDKKRE-PW------EFGIKMY----KRTLDDHQPAYIPRRLRANPKKRNRGRWAKTYYP 564

[Close]

BLAST of 28s ribosomal protein mitochondrial vs. nr
Match: gi|1070159154|ref|XP_018342245.1| (PREDICTED: 28S ribosomal protein S30, mitochondrial [Trachymyrmex septentrionalis] >gi|1009420820|gb|KYN39304.1| 28S ribosomal protein S30, mitochondrial [Trachymyrmex septentrionalis])

HSP 1 Score: 204.527 bits (519), Expect = 1.357e-54
Identity = 174/575 (30.26%), Postives = 266/575 (46.26%), Query Frame = 0

Query:   38 EPVYPPIK--TFRNTDEEELANLKDTLHSLKTVEEKQYYLNKPKYFGWPSYQLSPRFISYGSLEFIQAMTDTRLVE--GWPDSYQPTETMAQDLARVLAPKLARVIQDCEKVVSRMQVPNDRIYGHESHAYPKDES------RIDMIEWKLQQRLRVINRFFLNHLLGPAPHLLGVQVDHDPRVEAFWFRSGMDPDVSLIRKRKGLVKYLKKVKRPPWSTAMKPSEDYPQQPGDQVMQSKANPHLVHRHP-GMIAPFIGQDHDLCQNPD-QVPTFTLAPRTLGYIKSSKAGVNLPGCWTGSNNIHASLLLLSPVNVIDYRQVSQTIHEEQFGHRQDMLASKLILTGFTQLLAQACFLGYEPMNNVQEPLATQAVVTDGLKWKLAAYQLNRTALLDE-AGIKHPNNVCWQTPEQDLFKSNEETGQSEINLELLTQIIQVYLRTP------DLLP--TKTAKCLHDIQNDYNRNYFFKEYRTLCSRRLPALQKRKPIILPHEQLFKIRHKEQMFMDGNRDRPW---FQMARTDFLGKEHWHPEFKHLDHYDPYYKPRKFRSHKKDRT---WKKVVAP 585
            EP+YP I+  +F+   +       + + SL+TVEEK + +N P+Y+GW S  L    + Y SL   Q  T T +V+  G P  Y  T    + L R++      +  D E  +        R +  ++  +  DE+      +I++ +   +  +  INR  L HL    PHLL  +VD DPR+EA WF  G++P  + +R  +  VK+LK+    P +  +       Q  G  V+      HL H+HP   I P        C+N   +VPTF L P+ L Y    K   N+PG W G  N      LLS  N   Y Q       E++      L  + +L  ++ LL+QAC+ G+   N++  PL TQ ++T+G  W    YQLN T +  E A      N+CW T    LF   E      +N E+L  +I+ Y+  P      +L P   K+ K + DI++D  RN+  K+Y+ L + R  +  +R P I   ++++ IRHK +  MD  R+ PW    +M +             + LD + P Y PR+ R + K R    W K   P
Sbjct:   39 EPIYPSIEDISFKAKCKRNRQAWHEKIKSLETVEEKLFKINMPRYYGWKSLILKEHVVPYNSLSHAQYFTRTHIVKEFGLPIYYN-TVISTEQLDRIVQS----IKSDIEDNIIFEYCIRRREHEIKADKFLLDENIKALDRKINIEKIISKALIHRINRTMLIHLTSENPHLLHTEVDFDPRLEASWFMGGLNPP-NFVRNFRKSVKFLKEFVDDPVNLPV-------QYFGQPVI------HLRHKHPLRQIIPLSD-----CENSALEVPTFKLNPKVLTYTLEKKHLTNIPGFWPGDEN---EFGLLSYHNC-TYLQTRS----EKYNDTSIALTIQAVLASYSWLLSQACYQGFSTFNDITYPLTTQTIITNGQWWSFFVYQLNTTLVHSEYADENSKRNICWITEPIKLFDKIEIDKVHGLNEEVLKTLIKFYMNIPEERVGVNLKPYLGKSVKVIADIEHDERRNWLEKQYKHLVANR--SRHRRIPEIYDWQKIYIIRHKTRP-MDKKRE-PWQFGIKMYK-------------RTLDDHQPAYIPRRLRENPKKRNRGRWAKTYYP 564

[Close]

BLAST of 28s ribosomal protein mitochondrial vs. nr
Match: gi|768420508|ref|XP_011551023.1| (PREDICTED: 28S ribosomal protein S30, mitochondrial [Plutella xylostella])

HSP 1 Score: 202.601 bits (514), Expect = 4.245e-54
Identity = 148/511 (28.96%), Postives = 242/511 (47.36%), Query Frame = 0

Query:   32 REEYRSEPVYPPIK--TFRNTDEEELANLKDTLHSLKTVEEKQYYLNKPKYFGWPSYQLSPRFISYGSLEFIQAMTDTRLV--EGWPDSYQPTETMAQDLARVLAPKLARVIQDCEKVVSRMQVPNDRIYGHESHAYPKDESRIDMIEWKLQQRLRVINRFFLNHLLGPAPHLLGVQVDHDPRVEAFWFRSGMDPDVSLIRKRKGLVKYLKKVKRPPWSTAMKPSEDYPQQPGDQVMQSKANPHLVHRHPGMIAPFIGQDHDLCQNPD-QVPTFTLAPRTLGYIKSSKAGVNLPGCWTGSNNIHASLLLLSPVNVIDYRQVSQTIHEEQFGHRQDM--LASKLILTGFTQLLAQACFLGYEPMNNVQEPLATQAVVTDGLKWKLAAYQLNRTALLDEAGIKHPNNVCWQTPEQDLFKSNEETGQSEINLELLTQIIQVYLRTP-----DLLP--TKTAKCLHDIQNDYNRNYFFKEYRTLCSRRLPALQKRKPIILPHEQLFKIRHKEQMF 528
            + EY   P YPPI+  + ++    E  ++ D +  +KT+EEKQ  LN P+Y+GW    L+ + + Y ++  IQ  T +  +  E  PD+Y  TE +A D+ +        +  D E +++      +R     S    ++  + ++I   +   +R INR   N+L   A H+L  QVD+DPR EAFW   G+DP   ++                 W    K  ED   +P ++ +Q    P L  R+   + PFI   +   +NP+ +VP F   P+T+GY    + G N+PG W G       L + S   ++D          + FG   ++  L  + +   F  LLAQA + G+   N+V  PL+TQ ++T+G  W   AYQLN  A  ++      +NVC+ T    L++S E    + +N ++L  IIQVYL  P     D+ P   K  + + DI++D  R +    ++ L S +        P I   E ++KI++K + F
Sbjct:   29 QNEYTETPEYPPIQDLSLQSRKARERQSVYDKIRKVKTIEEKQIALNMPRYYGWKCIMLTDQKVPYNAMPVIQFYTRSHFIQSEKLPDTYTETEAIASDIVK-------EIKSDVEDIIAIEHEGVERNLTDTSSTLSEERQKENVITKNI---VRQINRTISNNLSSKASHILTAQVDYDPRHEAFWMVGGVDPPRKVVN----------------WRKTFKWYEDRINEPINRPVQYLGTPMLTLRNALPLKPFIP--YSEAENPEFKVPQFLYQPQTVGYSTEFRHGTNIPGYWPGDPEEFGLLSIHSRDYILD---------RKDFGPEDNIEALHCQALQASFGWLLAQANYQGFNTYNDVTYPLSTQTIITNGQLWSFYAYQLNTIAFHNDQVDNPKSNVCFGTNPLKLYESLENGKVNGLNEDVLKMIIQVYLNKPEERDYDMKPYLDKEEQVVADIEDDNKRCWLEDRFKHLVSNK--PKHYLTPEIYHWEYIYKIQNKTRFF 500

[Close]

BLAST of 28s ribosomal protein mitochondrial vs. nr
Match: gi|759051840|ref|XP_011335048.1| (PREDICTED: 28S ribosomal protein S30, mitochondrial [Ooceraea biroi] >gi|607362412|gb|EZA56664.1| 28S ribosomal protein S30, mitochondrial [Ooceraea biroi])

HSP 1 Score: 202.986 bits (515), Expect = 4.426e-54
Identity = 174/599 (29.05%), Postives = 284/599 (47.41%), Query Frame = 0

Query:   11 GRSGHWGWVGSMGRALHGPPIREEYRSEPVYPPIKTFRNTDEEELANLKDTLHSLKTVEEKQYYLNKPKYFGWPSYQLSPRFISYGSLEFIQAMTDTRLVE--GWPDSYQPTETMAQDLARVLAPKLARVIQDCEKVVSRMQVPNDRIYGHESHAYPKDESRIDMIE-----WKLQQRLRVINRFFLNHLLGPAPHLLGVQVDHDPRVEAFWFRSGMDPDVS--LIRKRKGLVKYLKKVKRPPWSTAMKPSEDYPQQPGDQVMQSKANPHLVHRHP-GMIAPFIGQDHDLCQNPD-QVPTFTLAPRTLGYIKSSKAGVNLPGCWTGSNNIHASLLLLSPVNVIDYRQVSQTIHEEQFGHRQDMLASKLILTGFTQLLAQACFLGYEPMNNVQEPLATQAVVTDGLKWKLAAYQLNRTALLDEAGIKH--PNNVCWQTPEQDLFKSNEETGQSEINLELLTQIIQVYLRTPD------LLP--TKTAKCLHDIQNDYNRNYFFKEYRTLCSRRLPALQKRKPIILPHEQLFKIRHKEQMFMDGNRDRPWFQMARTDFLGKEHWHPEFKHLDHYDPYYKPRKFRSHKKDR---TWKKVVAP 585
            G+S  +G +     AL+ P    +  +E +YPPI+      +++   + + + +L+TVEEK + +N P+Y+GW S  L    I Y SL ++Q +T T +V+  G P  Y     ++ D       +L  ++Q+ +  V       D I   E     +DE++++M+      +K ++ ++ INR  L HL    PHLL  +VD++PR+EA WF  G++P     ++RK+    K L+K    P +  +       Q  G  VM      HL H+HP   I P        C NP   VPT+  +P TLGY    +   N+PG W G  +    L   +  N+ D     +T            L+++ IL  ++ LL+QAC+ G+   N++  PL TQ V+T+G  W    YQLN T LL    +K     N+CW T    LF   E      +N ++L  +++ Y+  P+      L P   ++ K + DI++D  RN+  K+Y+ L   R  +  +R P I   ++++ I+HK +  M+  R+ PW         G    H   + LD + P Y P+  R + K +    W+K   P
Sbjct:   31 GQSVTYGELKKREAALNKPKRFTKNTAESLYPPIEHLDKRQKKQQI-VHEEIKNLETVEEKIFKINMPRYYGWKSLILHEHNIQYNSLPYVQQITRTHIVKESGLPAYYD--NVISND-------QLDNIVQEIKGSVE------DNI-AFEYCRRKRDETKMEMLNENNEHFKTKKFIQKINRTILIHLSSKYPHLLNAEVDYEPRLEASWFLGGLEPSARHRMVRKKN---KCLRKFADEPVTIPV-------QYDGHPVM------HLRHKHPLREIVPL-----SECTNPAYDVPTYEFSPETLGYKFGLQHLTNIPGFWPGDESEFGLLSYHTCKNLED-----RTKKYNDITDYYATLSAQAILASYSWLLSQACYQGFSTYNDITYPLTTQTVITNGKSWSFCVYQLN-TILLHSQHVKENPKRNMCWITEPLKLFDKIENEKIHGLNEQVLKTLVKFYVNAPEERQDVNLKPYLGESVKVIADIEHDERRNWLEKQYKHLMCNR--SRHRRIPEIYQWQKIYMIQHKTRP-MEKRRE-PW-------QFGINVMH---RRLDDHTPRYVPKCLRENPKKKRIGRWEKTYYP 571

[Close]

BLAST of 28s ribosomal protein mitochondrial vs. nr
Match: gi|815796294|ref|XP_012218816.1| (PREDICTED: 28S ribosomal protein S30, mitochondrial [Linepithema humile] >gi|815796296|ref|XP_012218817.1| PREDICTED: 28S ribosomal protein S30, mitochondrial [Linepithema humile])

HSP 1 Score: 201.06 bits (510), Expect = 1.927e-53
Identity = 172/580 (29.66%), Postives = 260/580 (44.83%), Query Frame = 0

Query:   38 EPVYPPIK--TFRNTDEEELANLKDTLHSLKTVEEKQYYLNKPKYFGWPSYQLSPRFISYGSLEFIQAMTDTRLVE--GWPDSYQPTETMAQDLARVLAPKLARVIQDCEKVVSRMQVPNDRIYGH----ESHAYPKDESRIDMIE----WKLQQRL-----RVINRFFLNHLLGPAPHLLGVQVDHDPRVEAFWFRSGMDPDVSLIRKRKGLVKYLKKVKRPPWSTAMKPSEDYPQQPGDQVMQSKANPHLVHRHPGMIAPFIGQDHDLCQNPD-QVPTFTLAPRTLGYIKSSKAGVNLPGCWTGSNNIHASLLLLSPVNVIDYRQVSQTIHEEQFGHRQDMLASKLILTGFTQLLAQACFLGYEPMNNVQEPLATQAVVTDGLKWKLAAYQLNRTALLDEAGIKHPN-NVCWQTPEQDLFKSNEETGQSEINLELLTQIIQVYLRTP------DLLP--TKTAKCLHDIQNDYNRNYFFKEYRTLCSRRLPALQKRKPI--ILPHEQLFKIRHKEQMFMDGNRDRPWFQMARTDFLGKEHWHPEFKHLDHYDPYYKPRKFRSHKKDRT---WKKVVAP 585
            EPVYP I+  ++    + +     D + SLKTVEEK +  N P+Y+GW S  L   ++ Y SL   Q +T T +++    P  Y            + + +L  V+Q       +  + ++ I+ H      H + KD    D+ +    W ++  +     + INR  L HL    PHLL  ++D +PR+EA W   G DP  + +RK +  V +LK               D    P D  +Q   +P +  RH  ++   I      C+NP   VP F  +P+ L Y    +   N+PG W G  N      LLS  N    ++      +E F      L  + +L  ++ LL+QAC+ G+   N++  PL TQAV+TDG  W    YQLN   +  E   ++P  NVCW T    LF   E      +N E+L  +I+ Y+ TP      DL P   K+ K + DI+ D  RN+  K+Y+ L   R     + KPI  I   ++++ I HK +  +D  RD  W+Q  +  F          + LD + P Y PR  R + K R    W K   P
Sbjct:   39 EPVYPTIEDLSWNAKKKRKRQVWYDKIKSLKTVEEKLFEFNMPRYYGWKSVLLDEHYVPYNSLSHAQHITRTHIMKEPDLPPYYNSI---------ISSEQLDNVLQSV-----KNNIEDNIIFEHFIRRREHEFEKDMLFKDIEDKQRKWNIEDTIVKTLIQNINRTMLVHLSSKYPHLLQAEIDFEPRLEASWIAGGTDPP-NFMRKFRESVDFLK---------------DNANDPVDLPIQYLGHPVIHLRHKHLLREVIPLSE--CENPALDVPIFKFSPQVLTYRIGRRHLTNIPGFWPGDEN---EFGLLSYHNCTHLQR-----RQETFNDTFAALKVQAVLASYSWLLSQACYQGFSTFNDITYPLTTQAVITDGQWWSFCVYQLNTVLIQSEHVTENPKRNVCWITEPIKLFDKLENEKVHGLNEEVLKNLIKFYVNTPEERIDVDLKPYLGKSEKVIADIEEDERRNWLEKQYKHLVCNR----PRHKPIPEIYDWQRIYLINHKTRP-LDKKRD--WWQSGKNAFK---------RRLDDHLPPYIPRVLRENPKKRKVGRWAKTFYP 562

[Close]

BLAST of 28s ribosomal protein mitochondrial vs. nr
Match: gi|801371298|ref|XP_012062327.1| (PREDICTED: 28S ribosomal protein S30, mitochondrial [Atta cephalotes])

HSP 1 Score: 200.675 bits (509), Expect = 3.257e-53
Identity = 174/575 (30.26%), Postives = 264/575 (45.91%), Query Frame = 0

Query:   38 EPVYPPIK--TFRNTDEEELANLKDTLHSLKTVEEKQYYLNKPKYFGWPSYQLSPRFISYGSLEFIQAMTDTRLVEGWP-DSYQPTETMAQDLARVLAPKLARVIQDCEKVVSRMQVPNDRIYGHESHAYPKDES------RIDMIEWKLQQRLRVINRFFLNHLLGPAPHLLGVQVDHDPRVEAFWFRSGMDPDVSLIRKRKGLVKYLKKVKRPPWSTAMKPSEDYP-QQPGDQVMQSKANPHLVHRHP-GMIAPFIGQDHDLCQNPD-QVPTFTLAPRTLGYIKSSKAGVNLPGCWTGSNNIHASLLLLSPVNVIDYRQVSQTIHEEQFGHRQDMLASKLILTGFTQLLAQACFLGYEPMNNVQEPLATQAVVTDGLKWKLAAYQLNRTALLDE-AGIKHPNNVCWQTPEQDLFKSNEETGQSEINLELLTQIIQVYLRTP------DLLP--TKTAKCLHDIQNDYNRNYFFKEYRTLCSRRLPALQKRKPIILPHEQLFKIRHKEQMFMDGNRDRPW---FQMARTDFLGKEHWHPEFKHLDHYDPYYKPRKFRSHKKDRT---WKKVVAP 585
            EP+YP I+  +F+   + +     + + SL+TVEEK + +N P+Y+GW S  L    I Y SL   Q  T T +++ +   +Y  T    + L R++      +  D E  +        R +  + +  P DE+      +I+M E   +  +  INR  L HL    PHLL  +VD +PR+E  WF  G++P  + +R  +  VK+LK+         +  S + P Q  G  V+      HL H+HP   I P        C+N   +VPTF L P+ L Y    K   N+PG W G  N      LLS  N   Y Q       E++      L  + IL  ++ LL+QAC+ G+   N++  PL TQ ++T+G  W    YQLN T +  E A      N+CW T    LF   E      +N E+L  +I+ Y+  P      +L P   K+ K + DI++D  RN+  K+Y+ L + R     +R   I   ++++ IRHK +  MD  R+ PW    +M +             + LD + P Y PR  R + K R    W K   P
Sbjct:   40 EPIYPSIEDISFKAKCKRKRQAWHEKIKSLETVEEKLFKINMPRYYGWKSLILKEHIIPYNSLSHAQYFTRTHIIKEFDLPTYYNTIISTEQLDRIVQS----IKSDIEDNIIFEYCIRRREHEIKVNKLPLDENIKALDRKINMEEIISKALIHRINRTMLIHLTSENPHLLHTEVDFEPRLETSWFMGGLNPP-NFVRNFRKSVKFLKEF--------VDDSVNLPVQYFGHPVI------HLRHKHPLRQIIPLSD-----CKNSTLEVPTFKLNPKVLTYTLEKKHLTNIPGFWPGDEN---EFGLLSYHNC-TYLQT----RPEKYNDTSVALTIQAILASYSWLLSQACYQGFSTFNDITYPLTTQTIITNGQWWSFFVYQLNTTLVHSEYADENSKRNICWITEPIKLFDKIENDKVYGLNEEVLKNLIKFYMNIPEERVGVNLKPYLGKSVKVIADIEHDERRNWLEKQYKHLVANR--PRHRRISEIYDWQKIYIIRHKTRP-MDKKRE-PWQFGIKMYK-------------RTLDDHQPVYIPRHLRENPKKRNRGRWAKTYYP 565

The following BLAST results are available for this feature:

BLAST of 28s ribosomal protein mitochondrial vs. L. salmonis genes
BLAST of 28s ribosomal protein mitochondrial vs. SwissProt
BLAST of 28s ribosomal protein mitochondrial vs. nr

BLAST of 28s ribosomal protein mitochondrial vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 1


Match Name	E-value	Identity	Description
EMLSAG00000003079	2.255e-49	30.16	supercontig:LSalAtl2s:LSalAtl2s173:1474170:1479971...	[more]

BLAST of 28s ribosomal protein mitochondrial vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 3


Match Name	E-value	Identity	Description
gi\|145559524\|sp\|P82924.4\|RT30_BOVIN	2.765e-11	23.44	RecName: Full=28S ribosomal protein S30, mitochond...	[more]
gi\|116242771\|sp\|Q9NP92.2\|RT30_HUMAN	2.418e-10	27.55	RecName: Full=39S ribosomal protein S30, mitochond...	[more]
gi\|24212381\|sp\|Q9D0G0.1\|RT30_MOUSE	2.642e-10	23.19	RecName: Full=28S ribosomal protein S30, mitochond...	[more]

BLAST of 28s ribosomal protein mitochondrial vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|1325304943\|ref\|XP_023334071.1\|	2.220e-73	31.75	39S ribosomal protein S30, mitochondrial-like [Eur...	[more]
gi\|1070599380\|ref\|XP_018397012.1\|	4.150e-62	31.47	PREDICTED: 28S ribosomal protein S30, mitochondria...	[more]
gi\|1070157813\|ref\|XP_018359570.1\|	1.442e-57	30.94	PREDICTED: 28S ribosomal protein S30, mitochondria...	[more]
gi\|1069709091\|ref\|XP_018312317.1\|	6.093e-56	29.86	PREDICTED: 28S ribosomal protein S30, mitochondria...	[more]
gi\|746866005\|ref\|XP_011064049.1\|	1.055e-55	30.59	PREDICTED: 28S ribosomal protein S30, mitochondria...	[more]
gi\|1070159154\|ref\|XP_018342245.1\|	1.357e-54	30.26	PREDICTED: 28S ribosomal protein S30, mitochondria...	[more]
gi\|768420508\|ref\|XP_011551023.1\|	4.245e-54	28.96	PREDICTED: 28S ribosomal protein S30, mitochondria...	[more]
gi\|759051840\|ref\|XP_011335048.1\|	4.426e-54	29.05	PREDICTED: 28S ribosomal protein S30, mitochondria...	[more]
gi\|815796294\|ref\|XP_012218816.1\|	1.927e-53	29.66	PREDICTED: 28S ribosomal protein S30, mitochondria...	[more]
gi\|801371298\|ref\|XP_012062327.1\|	3.257e-53	30.26	PREDICTED: 28S ribosomal protein S30, mitochondria...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold49_size462716	supercontig	scaffold49_size462716:144778..149869 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides	2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt	2018-04-19
T. kingsejongensis proteins Blastp vs. NR	2018-05-15

Properties


Property Name	Value
Note	F:structural constituent of ribosome

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
maker-scaffold49_size462716-snap-gene-1.22-mRNA-1	maker-scaffold49_size462716-snap-gene-1.22-mRNA-1	Tigriopus kingsejongensis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at scaffold49_size462716:144778..149869-

gene from alignment at scaffold49_size462716:144778..149869-

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>maker-scaffold49_size462716-snap-gene-1.22 ID=maker-scaffold49_size462716-snap-gene-1.22|Name=28s ribosomal protein mitochondrial|organism=Tigriopus kingsejongensis|type=gene|length=5092bp|location=Sequence derived from alignment at scaffold49_size462716:144778..149869- (Tigriopus kingsejongensis)
TTGCGTGAAACTCGGGCCGAATTTGGCGATCACTCCTCTACAACAAACAT
TCGACGGTTCATGTGGTCCAATTCGCCATCGGTCGCGAGGATTCCCGGGT
CCCGATGAGCGTGTTAGTGCGATGTGGGTCGCTCGGCCGATCCGGTCACT
GGGGCTGGGTCGGGTCCATGGGTCGGGCCTTGCACGGTCCGCCCATTCGC
GAGGAGTATCGGTCCGAGCCGGTCTACCCGCCCATCAAGACGTTCCGGAA
CACGGACGAGGAGGAGTTGGCCAACCTCAAAGACACGCTCCATAGCCTTA
AGACGGTGGAGGAAAAACAATACTATCTGAACAAGCCCAAATACTTTGGT
AGGCGGCGATGCTCGAGCCCATGAGGCCTCGTGGACCACGGAGGCCGATT
AGAGCTGGGCCCTGCCATATATTCCGGGGCTGGATAGGCACCTAACCCAG
TTTAAGGCCTGATTCTCCCTCCCCATTCAGCCATTCGAGCCCATCCCGGG
TGTAACATTTCGCGTATATCGGGTGGCCACCGGTTATGCCTTGATTTGTC
GTAGCATGACTTGCGGACCGAGTGCCCCTTTCGCTCCCCCATGGGGTGAA
CCCGGTCCCTGGGCGTCCAGGCCTCTGGGCCGACCATTGACGGAATGTCC
CACCCTAGTTTGGGCCTGTGGCCCCAGTCGGGGAAAAATCCTGGAATCGC
AGAGTCTGGGTTCCGCTTGGACGCGTGTTTTGGGTGTTAAGTAACGCCCA
TATCCGGGTGACCACCTAGTGTACGTCAATTGATTATAACTTATAAATGG
TGTATGCCATATAAGTGGGTAGACAAGCCCGGCCGGGTGGCAAAAGAATA
GGTTGCCTACCAACTTGCGCGGCGTTGATAAGCCGAGACAATGTTGGCTG
AAGAGTGTGTGTGTGTGGTCGCACCTTCCGGTGGTTTCGTGTTCTACACC
ATGGAACCCCCATGGTGAACACAGGGCCCACTGATGTTATTAGCTAATTT
AGCTAGTCGCCGTGCAGCCCCGTACAATCCAGCTCCAACCACTACTTTAA
TTTGTGGGGAACCTGAAGGGACCTGTCCTCAAGATGTGGCCGCACCTGTT
TTTCCTGACCTTGAACGACTAAGGTTACAGGGAGTCGTCATTCACTCCCC
TCAGTAGAAGAAAGACTGGAGTGGCGAAAATTTCTTTCTCCGCCGGGCCC
GGGAATCGATCTGCGGCCTTTCAGCCCGGCAGACTTCTTCGCTGACCACT
TCACCATTCAATCCACAGTATGAGTGAAGATTGAGGAATTGCAATGCTTC
AGGGTTTAGTGCAGGATATAGTGACAGAAAGGTTAAGCGATGGGTGGGCC
ACCCATGCTAACGGAGCTTCATCTGAGTGTCTGATCTATTGGATTGAACC
CACCCCTCACCCCCGAGGTTGGCGGATACGCAGGACATAACATAACCAGT
TTGAGAGTGGCCAGAGTCTCATGCCTCTCCCAAAGACCAAATTTGTGACC
ATGGCCGGTGATTGAGACCTTCCACTTTCAGGTTGGCCCTCCTATCAATT
GTCCCCGCGCTTTATTTCCTATGGCTCGCTGGAGTTCATCCAAGCCATGA
CGGATACCCGTTTGGTGGAGGGTTGGCCGGACTCGTACCAGCCCACGGAG
ACTATGGCCCAAGATCTGGCTCGGGTCTTAGCTCCGAAGCTGGCCCGGGT
CATCCAAGACTGTGAGAAAGTCGTGTCGAGAATGCAGGTGCCCAATGACA
GGATCTACGGACACGAGTCTCATGCCTATCCCAAGGACGAGTCGCGTATC
GACATGATTGAGTGGAAACTTCAGCAGCGCTTGAGAGTCATCAATCGTTT
TTTCTTGAACCATCTTTTGGGTCCGGCCCCTCATTTGCTGGGCGTGCAAG
TGGACCATGATCCGCGGGTGGAGGCCTTCTGGTTCCGGTCCGGCATGGAC
CCGGATGTGAGCTTGATCCGGAAGCGGAAAGGCTTGGTCAAGTATCTCAA
GAAGGTGAAACGCCCGCCCTGGTCGACGGCCATGAAGCCCTCCGAAGACT
ATCCCCAGCAGCCCGGCGACCAAGTGATGCAGTCCAAAGCGAACCCCCAT
CTTGTCCATCGGCACCCGGGCATGATTGCCCCTTTCATCGGGCAGGACCA
TGATCTGTGTCAAAATCCGGACCAAGTGCCCACTTTTACCCTTGCGCCCC
GAACGCTAGGGTACATCAAATCTTCCAAAGCGGGCGTGAATCTGCCCGGA
TGCTGGACTGGCTCCAACAACATCCACGCCTCCCTCCTACTCCTCAGCCC
CGTCAATGTGATTGACTATCGCCAGGTGTCTCAGACCATTCATGAAGAGC
AATTTGGCCATCGTCAGGACATGCTCGCCTCCAAACTGATCCTCACCGGC
TTCACCCAGCTCCTTGCCCAGGCCTGCTTCTTGGGCTATGAGCCCATGAA
CAACGTCCAGGAGCCTCTGGCCACCCAAGCCGTGGTCACCGATGGCCTCA
AGTGGAAATTGGCTGCTTATCAGCTCAATCGAACAGCCCTCCTGGATGAG
GCTGGGATCAAGCATCCCAATAATGTCTGCTGGCAAACGCCCGAGCAGGA
TCTGTTCAAGTCCAATGAGGAAACCGGACAATCCGAGATCAATCTCGAGC
TTCTGACCCAGATCATCCAGGTCTACTTGAGAACACCCGACCTATTACCA
ACAAAGACGGCCAAATGTCTACATGACATACAAAACGACTACAATCGGAA
TTACTTTTTCAAGGAGTACAGGTATGACAAAACTTTCATCGACGAGTTAT
TTGCGATATCATTCCAATAAGCCCCAGTCTGATAACGTCTTGATTCGACC
ACAAAAGCATCCCCCATAAGGCCTTGAAGCACTCTGACTTTACTAAATAT
TGTGATAAGAATACATTTGTACTCTCAATTGTCGAAGTCTGGCTTTGTGT
TCCAGCGAGCCAGCACGAGAGAGAGAGAGAGCTTCATTCAGACTGATCTC
ATTTTTTTTCAATTCCGATGACAAAATGCTCTAGGGATTGAGAAAGAGGA
GTACATGAGGTTTACCCGCTCATAGAATGTATGGACCAATCGATTGGCTG
CTGTGAGATTGCGTCCTTCAAAATACCTTTAGTTAGGAGACTATTAGGTG
CTGTCTGAATGCTCGCTCATCCTAACGTACAATCTCGTAGAAGTTAGTGG
TGTAGTTAATCAAACATATCGAGGGCGCCGGGGAACAATGGGGGGTAACG
ACTTTCTGAAAAACTGTCTTCTGGGTTGCCTGCTTTTCACAAGGTTCTCA
TGCACATATCAGCGACACAGGGAACCTTAAAACCGTGGGGCAGCGGAAAT
AGACTCGAAAAAAAATTTGGTAATTGCACGATTGTCACACAAGGGTAAAA
CGGGATCAGTGTTGACCGAGAAAACTGGCGATTGGAGTGTGACAGTGTGG
CATTGAGCTCTCTTAACACACTTTACATCGATATCATACTAAGGTAAACT
TCAGACAAGCGTTATTTTGCTTTCACTTCAACCTATTGCTGAAAAGTGTA
GTTAGCCCATTGTCCCCCTGCGCCCTCAATTTGCCAGTATGTAGTTTAGA
ACCTATTTTTGATCGCATTAAACGACGGCAAAATAGTCCAAGGGCATGAG
TTTGTGTACGGGTTCATTTGGAAGCCACTCAAGGTCACCACTTGGCCGTC
CAACTACCCCAGCAAGTCAGCGAAAACCTTTTCTACTCCTTGGGAGACTA
CTTTTGCCTTAACAGTATGGCCAAGCCAGCAAAAAGAACTTGGGACTTTT
TGGGTATCCACCAAGGGTGTATACTGTACCCTGTGGTTCGGACACAAAGG
ACAAAATCAGACGACTTGGAGGCGAGAGCGGGAAATTCAAAATCAGGGGG
ACACCAAGCAAGATAGTGCCTTATTGCTTGGTATCTTTCTAGGTAGAATT
TTCCCTTCAATTGTGCTTAAATAAATGTCCCAACATTGAACATCGGCTGC
GGCTGCAACACAAAGAAACTAATTCGTAGGCTATGCAAATACTGTTTGAC
TTTTCCACCAACTCTGCCATCCTGCCAATTAGTCTGTTCTTCCCAACACA
CGTTCAAATACCCTATTGCCCATGTATTCCACTTCACATACGATCATTCC
CAGCCCAATGCCCATGGATTTGTTCTCTGATCGACGAGTATGGATATTCG
TACCAGGAGAAATATCCGTCCGGTAACAGAAACCCCTCGATACGGGTGAC
CTTGGTTGTTCCTTTGGAGTACAAAATGCAGCCTTATCCCCGGTCATGAA
GGCTGTCAAATATAACACATAGCCAAGACTGATGCAATGCCAGGTCTTCA
TATTTGTATGCGTAGGGCCCCAAAGGCCTAATTACGACGGCAACTCGTCA
AAACCTTATCATTCCCTAAAGTTCTTCCGCCAAAGACCACTCCGTTTTCC
CGAAGAAACCAATGAAGCTGGGTAGAATAGATTGTATGTTGTTTTAACGT
TCACGAATTTGCCTCCTTAACCAGAACTCATTGCTTACATTCTTCTCCTG
TCAGCTCAGCGATCAAGAAAGGAGTTGGTCCAATTGGATGTGCGACTTAA
TTAAGGCAGACTTGAGGCAGATTAATGGCTTTAGAGGCCAGAAAAGTGCG
CATCAAGGGCAACCAAGGGCCGATTATAGACGGGGAAAGGGGTCAATCGA
TGTTCAAGTTCAACCCCCAAAGGACAATCTAACTGGTTGACTCACTGGTA
CCAAATAATCGAGTTGCTTCCATTTCCAGGACCCTTTGTTCTCGCCGACT
GCCTGCTTTGCAGAAGCGCAAGCCGATTATTCTTCCCCATGAGCAGTTGT
TCAAGATCAGACACAAAGAGCAGATGTTCATGGATGGTAATCGAGATCGA
CCTTGGTTCCAAATGGCTCGAACCGACTTTTTGGGGAAAGAGCATTGGCA
TCCTGAGTTCAAGCATCTGGATCACTACGACCCCTACTACAAACCCAGGA
AGTTCCGATCCCACAAGAAGGATAGAACTTGGAAGAAAGTGGTTGCGCCC
ATCCCGGATGAAGAATAGATGAGGGTTATGAAATAAACCATA

Synonyms

The feature '28s ribosomal protein mitochondrial' has the following synonyms


Synonym
Tk03615

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