upf0504 protein, maker-scaffold507_size152468-snap-gene-0.39 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of upf0504 protein vs. L. salmonis genes
Match: EMLSAG00000000190 (supercontig:LSalAtl2s:LSalAtl2s1029:166039:167214:1 gene:EMLSAG00000000190 transcript:EMLSAT00000000190 description:"maker-LSalAtl2s1029-augustus-gene-1.34") HSP 1 Score: 161.384 bits (407), Expect = 2.063e-48 Identity = 96/248 (38.71%), Postives = 141/248 (56.85%), Query Frame = 0 Query: 11 RPLVTDQDDEDTGSAGPASPPPLTSGPFVRLATLPATAVAITANVIMIVLVFLLPILCEGGQKPHGSSPPPGGGEQALEVCHLEPFSILVYTHAGHWLIHLVVDQYLKKEHKKSRLRGYIQFYLQTKNIRRTPFYLVSIGNAVLLITVTALHDYCDPDLCPDKMMKVDYLRGLITLECLVIICLWFNYIINVREFHAQRPLPDVLNNEAMRQMLVDFNSEAGYDDSIFGASMAQDEKDEILEKQAELI 258 RP TD +D+D+ A F + T + +T+N+ ++ L +LP +C +K H C + PFS L+Y H HWLIHL+ DQY K H KS+L GYI+FY+QTKNIRR PFY+VS GNA+LLI T L++ C +C + VDYLRGL+T+E L I+ L Y++N+++FH + PDVL + M +++ G D I GAS ++ +L++Q+E+I Sbjct: 6 RPNSTDGEDQDSHVTQVADSEGTWDYDFKPMPTYVLCIILMTSNLFLLFLTLILPSIC--WRKKH---------------CSIRPFSWLIYGHGLHWLIHLIGDQYWKYHHAKSKLDGYIEFYIQTKNIRRAPFYIVSFGNALLLIASTILYENCKSYICEE----VDYLRGLVTIEALSILSLITKYLVNLKKFHETKAPPDVLRQDWMNRLISKRVPTLGISDLI-GAS-PDKIRNIVLDRQSEVI 230
BLAST of upf0504 protein vs. SwissProt
Match: gi|81904358|sp|Q9CXT7.1|TM192_MOUSE (RecName: Full=Transmembrane protein 192) HSP 1 Score: 95.9005 bits (237), Expect = 6.185e-22 Identity = 54/173 (31.21%), Postives = 94/173 (54.34%), Query Frame = 0 Query: 107 WLIHLVVDQYLKKEHKKSRLRGYIQFYLQTKNIRRTPFYLVSIGNAVLLITVTALHDYCDPD-LCPDKMMKVDYLRGLITLECLVIICLWFNYIINVREFHAQRPLPDVLNNEAMRQMLVDFNSEAGYDDSIFGASMAQDEKDEILEKQAELIRYLRSHIGAQNERLVNLASQ 278 W++HL+ ++Y++ H+K R RGY Q Y T++++ + S GN LL+ + H + +P L + ++ V L + +L CL++ YI+ +R F+ +PLPDVL E + + SE G+ +EI+EKQ ++I YL+ H ++RL+ LA+Q Sbjct: 104 WILHLLFERYVQYHHRKVRSRGYSQIYRSTRHLKTLALTIHSSGNTALLLLLCVQHSFPEPSKLYLELILAVLALELICSLSCLIL------YIVKIRRFNRAKPLPDVLEEEKIYAYPSNTASETGFRTV--------SSLEEIVEKQEDIIVYLKRHNALLSKRLLELATQ 262
BLAST of upf0504 protein vs. SwissProt
Match: gi|81883441|sp|Q5U1Y0.1|TM192_RAT (RecName: Full=Transmembrane protein 192) HSP 1 Score: 92.8189 bits (229), Expect = 6.971e-21 Identity = 75/286 (26.22%), Postives = 127/286 (44.41%), Query Frame = 0 Query: 1 MATGTRPTD-VRPLVTDQDDEDTGSAGPASPPPLTSGPFVRLATLPATAVA---ITANVIMIVLVFLLPILCEGGQKPHGSSPPPGGGEQALEVCHLEPFSILVYTHAGH---WLIHLVVDQYLKKEHKKSRLRGYIQFYLQTKNIRRTPFYLVSIGNAVLLITVTALHDYCDPD-LCPDKMMKVDYLRGLITLECLVIICLWFNYIINVREFHAQRPLPDVLNNEAMRQMLVDFNSEAGYDDSIFGASMAQDEKDEILEKQAELIRYLRSHIGAQNERLVNLASQ 278 MA G R D ++ DD+ P L + R LP +A + +V+ + L FL +LC P E + P + G W++HL+ ++Y++ H+K R RGY Q Y T++++ + S GN LL+ + + + +P+ L + ++ V L + +L CLV+ Y + +R F+ +P PDVL E + SE G+ +EI+EKQ ++I YL+ H ++RL+ LA+Q Sbjct: 1 MAAGGRLEDGSLDILQSTDDDPLLDTQPLPHHSLHAHFRPRFHPLPTVIIANLLLLIHVVFVTLAFLTGVLCLY----------PDPNEDKCPENYTNPLKVQTAIILGKVILWILHLLFERYIQYHHRKVRSRGYSQIYRSTRHLKALALTIHSSGNTALLLLLCVQYSFPEPNKLYLELILAVLALELICSLSCLVL------YTVKIRRFNKAKPQPDVLEEEKCYAYPSNIASETGFR--------TVSSLEEIVEKQGDIIVYLKRHNALLSKRLLELATQ 262
BLAST of upf0504 protein vs. SwissProt
Match: gi|82185915|sp|Q6NYE7.1|TM192_DANRE (RecName: Full=Transmembrane protein 192) HSP 1 Score: 90.5077 bits (223), Expect = 6.177e-20 Identity = 55/172 (31.98%), Postives = 92/172 (53.49%), Query Frame = 0 Query: 107 WLIHLVVDQYLKKEHKKSRLRGYIQFYLQTKNIRRTPFYLVSIGNAVLLITVTALHDYCDPDLCPDKMMKVDYLRGLITLECLVIICLWFNYIINVREFHAQRPLPDVLNNEAMRQMLVDFNSEAGYDDSIFGASMAQDEKDEILEKQAELIRYLRSHIGAQNERLVNLASQ 278 W++ + D+ +++ H R +GY+ FY TK I+ P + S GNA +L TV A D ++ K + V L +I LE L+ I Y ++V +F+ ++P PDV E D ++E G+ D G+S+ ++++EKQA+LI YL+ H + R++ L Q Sbjct: 108 WVVVFIYDRVVQRRHSAVRRKGYLDFYRMTKGIKSLPLLIHSAGNAAIL-TVIAPSSLLDANV---KNLSVYLLLAIICLELLLTIICLLRYTVHVVKFNRKKPHPDVTEEERSYGCSSDAHTETGFRD---GSSL-----EDVVEKQADLIDYLKQHNSVLSRRILTLTGQ 267
BLAST of upf0504 protein vs. SwissProt
Match: gi|74728307|sp|Q8IY95.1|TM192_HUMAN (RecName: Full=Transmembrane protein 192) HSP 1 Score: 85.1149 bits (209), Expect = 4.292e-18 Identity = 62/225 (27.56%), Postives = 109/225 (48.44%), Query Frame = 0 Query: 54 NVIMIVLVFLLPILCEGGQKPHGSSPPPGGGEQALEVCHLEPFSILVYTHAGHWLIHLVVDQYLKKEHKKSRLRGYIQFYLQTKNIRRTPFYLVSIGNAVLLITVTALHDYCDP-DLCPDKMMKVDYLRGLITLECLVIICLWFNYIINVREFHAQRPLPDVLNNEAMRQMLVDFNSEAGYDDSIFGASMAQDEKDEILEKQAELIRYLRSHIGAQNERLVNLAS 277 +++ +VL FL +LC PG L+V ++++ W++HL+++ Y++ H K R RGY Y T++++R + S GN VLL+ + H + +P L D ++ + L + +L CL+I Y + +R F+ +P PD+L E + + SE G+ +EI+EKQ + I YL+ H ++RL+ L S Sbjct: 58 HLVFVVLAFLTGVLCSYPNP--NEDKCPGNYTNPLKVQ-----TVIILGKVILWILHLLLECYIQYHHSKIRNRGYNLIYRSTRHLKRLALMIQSSGNTVLLLILCMQHSFPEPGRLYLDLILAILALELICSLICLLI------YTVKIRRFNKAKPEPDILEEEKIYAYPSNITSETGFR--------TISSLEEIVEKQGDTIEYLKRHNALLSKRLLALTS 261
BLAST of upf0504 protein vs. SwissProt
Match: gi|160358765|sp|Q5RCG1.2|TM192_PONAB (RecName: Full=Transmembrane protein 192) HSP 1 Score: 84.7297 bits (208), Expect = 6.151e-18 Identity = 61/225 (27.11%), Postives = 109/225 (48.44%), Query Frame = 0 Query: 54 NVIMIVLVFLLPILCEGGQKPHGSSPPPGGGEQALEVCHLEPFSILVYTHAGHWLIHLVVDQYLKKEHKKSRLRGYIQFYLQTKNIRRTPFYLVSIGNAVLLITVTALHDYCDP-DLCPDKMMKVDYLRGLITLECLVIICLWFNYIINVREFHAQRPLPDVLNNEAMRQMLVDFNSEAGYDDSIFGASMAQDEKDEILEKQAELIRYLRSHIGAQNERLVNLAS 277 +++ ++L FL +LC PG L+V ++++ W++HL+++ Y++ H K R RGY Y T++++R + S GN VLL+ + H + +P L D ++ + L + +L CL+I Y + +R F+ +P PD+L E + + SE G+ +EI+EKQ + I YL+ H ++RL+ L S Sbjct: 58 HLVFVILAFLTGVLCSYPNP--NEDKCPGNYTNPLKVQ-----TVIILGKVILWILHLLLECYIQYHHSKIRNRGYNLIYRSTRHLKRLALMIRSSGNTVLLLILCMQHSFPEPGRLYLDLILAILALELICSLICLLI------YTVKIRRFNKAKPEPDILEEEKIYAYPSNITSETGFR--------TISSLEEIVEKQGDTIEYLKRHNALLSKRLLALTS 261
BLAST of upf0504 protein vs. SwissProt
Match: gi|82178858|sp|Q5EAL6.1|TM192_XENTR (RecName: Full=Transmembrane protein 192) HSP 1 Score: 80.4925 bits (197), Expect = 2.308e-16 Identity = 53/189 (28.04%), Postives = 102/189 (53.97%), Query Frame = 0 Query: 93 LEPF---SILVYTHAGHWLIHLVVDQYLKKEHKKSRLRGYIQFYLQTKNIRRTPFYLVSIGNAVLLITVTALHDY-CDPDLCPDKMMKVDYLRGLITLECLVIICLWFNYIINVREFHAQRPLPDVLNNEAMRQMLVDFNSEAGYDDSIFGASMAQDEKDEILEKQAELIRYLRSHIGAQNERLVNLAS 277 ++PF ++LV + WL+H+V +++ + H K+R RG++ Y T++++ P + S GNA LL+ ++ + + L P ++ V L ++++ CL+I Y + + F+ +P PD++ E + N E G+ S AS+ +E++EKQ + I YL+ H +++L+ LAS Sbjct: 86 IDPFQLSTVLVISKLVLWLLHVVNERFAQHHHCKARSRGFLHLYRSTRHLKALPLIIHSTGNAALLLILSVQDSFTSNSQLYPCLILSVLLLELILSVICLII------YTVRIYRFNKSKPRPDIIEEEKINAFHGHVNPEIGFRHS---ASL-----EEVVEKQGDTIEYLKHHNALLSKQLLALAS 260
BLAST of upf0504 protein vs. SwissProt
Match: gi|160358764|sp|Q66KF2.2|TM192_XENLA (RecName: Full=Transmembrane protein 192) HSP 1 Score: 68.5514 bits (166), Expect = 3.264e-12 Identity = 65/272 (23.90%), Postives = 121/272 (44.49%), Query Frame = 0 Query: 14 VTDQDDEDTGSAGPASPP-PLTSGPFVRLATLPATAVAITANVIMIVLVFLLPI-----LCEGGQKPHGSSPPPGGGEQALEVCHLEPFSILVYTHAGHWLIHLVVDQYLKKEHKKSRLRGYIQFYLQTKNIRRTPFYLVSIGNAVLLITVTALHDY-CDPDLCPDKMMKVDYLRGLITLECLVIICLWFNYIINVREFHAQRPLPDVLNNEAMRQMLVDFNSEAGYDDSIFGASMAQDEKDEILEKQAELIRYLRSHIGAQNERLVNLASQ 278 +T DED P P L S +P ++I +I + V L + L G +K S P ++LV + WL+H+V +++ H K++ +G++ Y T++++ P + S GNA LL+ ++ + L P ++ V L ++++ CL+I Y + + F+ ++P PD++ E + N E G+ AS+ +E++EKQ + I YL+ H +++L+ L S Sbjct: 13 LTQSADEDCFLDAPLLPSQKLQSVIRPHFHPVPTVCISILLALINLAYVTLAVVAFYFCLFSGKKKECNQSVAPFNLS-----------TVLVISKLILWLLHVVNERFAHHHHCKAKNKGFLHLYRSTRHLKGLPLIIHSTGNAALLLILSVQDSISSNRQLYPCLILSVLLLELILSVICLII------YTVRIYRFNKRKPRPDIIEEEKINAYEGHVNPEIGFRHR---ASL-----EEVVEKQGDTIEYLKHHNALLSKQLLALTSN 259
BLAST of upf0504 protein vs. nr
Match: gi|936590418|ref|XP_014208356.1| (transmembrane protein 192 isoform X2 [Copidosoma floridanum] >gi|936590420|ref|XP_014208357.1| transmembrane protein 192 isoform X2 [Copidosoma floridanum]) HSP 1 Score: 106.301 bits (264), Expect = 1.704e-23 Identity = 68/189 (35.98%), Postives = 99/189 (52.38%), Query Frame = 0 Query: 96 FSILVYTHAGHWLIHLVVDQYLKKEHKKSRLRGYIQFYLQTKNIRRTPFYLVSIGNAVLLITVTALH-----DYCDPDLCPDKMMKVDYLRGLITLECLVIICLWFNYIINVREFHAQRPLPDVLNNEAMRQMLVD-FNSEAGYDDSIFGASMAQDEKDEILEKQAELIRYLRSHIGAQNERLVNLASQ 278 + +L+Y H +WLI LVVD Y++ H R+ GY+ FY T RTP ++ S+ N V L+ LH DY V+Y+ L + E +I+ ++ NYI V F+ RP PDV+ E + D + E G+ G S+A E+LEKQA+LIRYLR H + +++ LASQ Sbjct: 60 YFVLLYLHCLYWLIILVVDYYVRMRHHFLRISGYLDFYQSTYQHIRTPLFISSLWNTVYLLLSVILHQSHKTDYERYCRSSQWFTPVNYILLLTSFELTIIVPVYVNYIKRVMRFNRTRPPPDVIREEWLTSFTQDSYTGEVGFHQR--GLSLA-----ELLEKQADLIRYLRDHNVKLSHKMMLLASQ 241
BLAST of upf0504 protein vs. nr
Match: gi|762159339|ref|XP_011417869.1| (PREDICTED: transmembrane protein 192 [Crassostrea gigas] >gi|762159341|ref|XP_011417870.1| PREDICTED: transmembrane protein 192 [Crassostrea gigas]) HSP 1 Score: 106.686 bits (265), Expect = 1.809e-23 Identity = 79/266 (29.70%), Postives = 131/266 (49.25%), Query Frame = 0 Query: 14 VTDQDDEDTGSAGPASPPPLTSGPFVRLATLPATAVAITANVIMIVLVFLLPILCEGGQKPHGSSPPPGGGEQALEVCHLEPFSILVYTHAGHWLIHLVVDQYLKKEHKKSRLRGYIQFYLQTKNIRRTPFYLVSIGNAVLLITVTALHDYCDPDLCPDKMMKVDYLRGLITLECLVIICLWFNYIINVREFHAQRPLPDVLNNEAMRQ-MLVDFNSEAGYDDSIFGASMAQDEKDEILEKQAELIRYLRSHIGAQNERLVNLASQ 278 V D D ++ S P S P+ ++ T+ A A+ IT +++ + VF++P+ GG VC FS+L Y H G W++ L+ D + + +H K+R GY++FY +T+ IRR P LVS G VLL+ V LH ++ +K + + G I++E I+ Y++ F+ + PDV + M M +SE G+ D + D++LE+QA++IRYL+ H +RL+ L + Sbjct: 22 VQDSDRDELLSETP-SLSTTHDPPYRKIHTIWAAALEITVIIVVEICVFVIPL----------------GGVCTASVC--SNFSVLCYMHGGLWVVMLMFDFFYRIQHNKNRKLGYLEFYRRTRYIRRVPL-LVSSGANVLLVIVLTLH---YDNVIHEKDLGLVLQIG-ISMEMAAILLFLIWYLVMSVNFNNSQVGPDVAREDLMNSFMQTSVSSEIGFKDDSYS--------DQVLERQADMIRYLKQHNVQLGKRLLALTEE 255
BLAST of upf0504 protein vs. nr
Match: gi|1069810196|ref|XP_018328906.1| (PREDICTED: transmembrane protein 192 isoform X1 [Agrilus planipennis] >gi|1069810198|ref|XP_018328907.1| PREDICTED: transmembrane protein 192 isoform X1 [Agrilus planipennis] >gi|1069810201|ref|XP_018328908.1| PREDICTED: transmembrane protein 192 isoform X1 [Agrilus planipennis]) HSP 1 Score: 107.071 bits (266), Expect = 1.825e-23 Identity = 67/191 (35.08%), Postives = 104/191 (54.45%), Query Frame = 0 Query: 96 FSILVYTHAGHWLIHLVVDQYLKKEHKKSRLRGYIQFYLQTKNIRRTPFYLVSIGNAVLL-ITVTALHDYCDPDLCPDKMMK------VDYLRGLITLECLVIICLWFNYIINVREFHAQRPLPDVLNNEAMRQMLVDFNSEAGYDDSIFGASMAQDEKDEILEKQAELIRYLRSHIGAQNERLVNLASQI 279 + I++Y H G W L+VDQ ++ H + R+ GY++FY +T+ R P Y++S+ NAV+L I V H Y D DK +K + Y+ LIT+E VI + NYI+ VREF+ +P PDV E +S + G D+ +++EKQA+LIR+L+ H E+L+ L +Q+ Sbjct: 80 YFIIIYMHVGLWFFSLIVDQVVRIHHYQLRMSGYLEFYKKTQVHHRLPLYVISLWNAVILFIQVLMQHFYSDN--FADKCIKSGLLSPISYIAALITIETCVIAGVNINYIVRVREFNTTQPPPDVQKEEWNA-----CSSHEQFAQGEIGYRPPGDKIYDLIEKQADLIRHLKDHNAQLAEKLMVLNAQL 263
BLAST of upf0504 protein vs. nr
Match: gi|1059406832|ref|XP_017776297.1| (PREDICTED: transmembrane protein 192 isoform X2 [Nicrophorus vespilloides]) HSP 1 Score: 105.916 bits (263), Expect = 2.014e-23 Identity = 62/197 (31.47%), Postives = 105/197 (53.30%), Query Frame = 0 Query: 89 EVCHLEPFSILVYTHAGHWLIHLVVDQYLKKEHKKSRLRGYIQFYLQTKNIRRTPFYLVSIGNAVLLITVTALHDYCDPDLCPDKMMK------VDYLRGLITLECLVIICLWFNYIINVREFHAQRPLPDVLNNEAMRQMLVDFNSEAGYDDSIFGASMAQDEKDEILEKQAELIRYLRSHIGAQNERLVNLASQI 279 E + IL+Y H G W + L++DQ + +H R+ GY+ FY +T+ R P Y+VS+ NAV+L+ + AL + PD +K ++ ++Y L+T E +I + NYI+ V F+ Q+P PDV R+ +S+ + G D+ + +EKQA++IR+L+ H E+L+ L +Q+ Sbjct: 50 EAAKCREYFILIYAHVGLWFLTLILDQIARAKHYSLRMNGYLDFYKKTQVHHRLPLYIVSLWNAVILL-LQALMQHFYPDNFAEKCLEGGLLSPINYFCALMTFEFCLIFGVNINYILRVNTFNNQKPPPDV-----QREEWNACSSDQAFSQGEIGYRQLGDKMYDFIEKQADMIRHLKDHNARLGEKLMVLNAQL 240
BLAST of upf0504 protein vs. nr
Match: gi|815802993|ref|XP_012222186.1| (PREDICTED: transmembrane protein 192 [Linepithema humile] >gi|815802995|ref|XP_012222187.1| PREDICTED: transmembrane protein 192 [Linepithema humile] >gi|815802997|ref|XP_012222188.1| PREDICTED: transmembrane protein 192 [Linepithema humile] >gi|815802999|ref|XP_012222189.1| PREDICTED: transmembrane protein 192 [Linepithema humile]) HSP 1 Score: 105.916 bits (263), Expect = 2.106e-23 Identity = 67/190 (35.26%), Postives = 99/190 (52.11%), Query Frame = 0 Query: 94 EPFSILVYTHAGHWLIHLVVDQYLKKEHKKSRLRGYIQFYLQTKNIRRTPFYLVSIGNAVLLITVTALH-----DYCDPDLCPDKMMKVDYLRGLITLECLVIICLWFNYIINVREFHAQRPLPDVLNNEAMRQMLVDFNSEAGYDDSIFGASMAQDEKDEILEKQAELIRYLRSHIGAQNERLVNLASQ 278 + + I +Y H +WLI +V D +K H K R+ GY+ FY T + RTP ++ S+ N L+ LH DY + ++Y+ L +E ++I+ + NYI V F+ RP PDVL +E M + D S AG + G + E+LEKQA+LIRYLR H + R++ LASQ Sbjct: 58 DTYFIYLYLHCAYWLIVMVTDHIVKARHHKLRIDGYLDFYQMTYRLIRTPLFITSLWNTCYLLLAVILHHTHKVDYERYCKASEWFTPLNYIFLLTNVELVIILPAYINYIKRVMRFNRLRPPPDVLRDEWMSPFIED--SYAGMGEV--GYRQRGMDLQELLEKQADLIRYLRDHNVKLSHRIMELASQ 243 The following BLAST results are available for this feature:
BLAST of upf0504 protein vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 1
BLAST of upf0504 protein vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 7
BLAST of upf0504 protein vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold507_size152468:8105..12058- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold507_size152468-snap-gene-0.39 ID=maker-scaffold507_size152468-snap-gene-0.39|Name=upf0504 protein|organism=Tigriopus kingsejongensis|type=gene|length=3954bp|location=Sequence derived from alignment at scaffold507_size152468:8105..12058- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'upf0504 protein' has the following synonyms
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