spt transcription factor family member, maker-scaffold511_size151351-snap-gene-0.23 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of spt transcription factor family member vs. L. salmonis genes
Match: EMLSAG00000011985 (supercontig:LSalAtl2s:LSalAtl2s853:228352:229792:1 gene:EMLSAG00000011985 transcript:EMLSAT00000011985 description:"augustus-LSalAtl2s853-processed-gene-2.5") HSP 1 Score: 417.157 bits (1071), Expect = 4.327e-145 Identity = 229/372 (61.56%), Postives = 255/372 (68.55%), Query Frame = 0 Query: 96 ICLIALVA---TASTVSGQRRAKSLVNTFPFSQG--GAAANHAHDHDH-------HDHAHAAHPVQAAAPARASRQGQGDEVALDIGSIAAAGERCIDKVVMVEETEYDEEIECHHSYSERCHTTTPPTLSPTGGE-CEENFKKSCFIEYRKV-LEDPSPSATLPSSARARDP---RNEDRLRCETRYHEHEVEDDVVECETIQEEKCEDVTQGYTTEQKCTKWPKQVPEETCNLEPQRSCKHVTKLKCTKWPKQVCKNEKKTVKKYTPETECKKVGRELCGPSGCLLQPGPEECFDKKETVVQEVPEETCNLEPQRSCKHVTKLVPLLKPAEECVDIPKEVCSRSRKNPRKVQKPVVKKWCYVPSEQSGLA 450 ICL AL+ + R +SL+NTFPF+ G G AA+ H+H H H HAH A+ R +RQG GD+ LDIGSIAAAGERCIDKVV+VEETEYD+ IECHHSYSERCHTT P E CEENFKKSCFIEY+KV +++ P P + C TRYHEH+VEDDVV CETIQEEKCEDVTQGYTTEQKCTK WP+QVC +EKK V KY+P+TECKKV RELCGPSGC+LQPGPEECFDKKET+VQEVPEE CNLEPQ+SCK VTKLVP LKP EECVD+PKEVCSRSRKNPRKVQKPVVKKWCYVPS SGLA Sbjct: 8 ICLFALIGCVMGGRNLRPIRGQRSLLNTFPFNSGERGTAASEDHEHVHEHLAHEEHGHAHDESQEFEASENRLARQG-GDDXPLDIGSIAAAGERCIDKVVVVEETEYDDHIECHHSYSERCHTTYTTDFEPQQEEKCEENFKKSCFIEYKKVAIDETIKFCHTPFICEGEGPEECKTVYESECTTRYHEHDVEDDVVNCETIQEEKCEDVTQGYTTEQKCTK----------------------------WPRQVCTSEKKNVLKYSPQTECKKVPRELCGPSGCVLQPGPEECFDKKETIVQEVPEENCNLEPQKSCKQVTKLVPSLKPVEECVDVPKEVCSRSRKNPRKVQKPVVKKWCYVPSAASGLA 350
BLAST of spt transcription factor family member vs. L. salmonis genes
Match: EMLSAG00000012697 (supercontig:LSalAtl2s:LSalAtl2s963:82712:83816:-1 gene:EMLSAG00000012697 transcript:EMLSAT00000012697 description:"augustus-LSalAtl2s963-processed-gene-0.9") HSP 1 Score: 412.535 bits (1059), Expect = 2.435e-143 Identity = 234/371 (63.07%), Postives = 259/371 (69.81%), Query Frame = 0 Query: 93 FAKICLIALVATASTVSG--------QRRAKSLVNTFPFSQGGAAANHAHDHDHHDHAHAAHPVQAAAPARASRQGQGDEVALDIGSIAAAGERCIDKVVMVEETEYDEEIECHHSYSERCHTT-TPPTLSPTGGECEENFKKSCFIEYRKV-LEDPSPSATLPSSARARDP---RNEDRLRCETRYHEHEVEDDVVECETIQEEKCEDVTQGYTTEQKCTKWPKQVPEETCNLEPQRSCKHVTKLKCTKWPKQVCKNEKKTVKKYTPETECKKVGRELCGPSGCLLQPGPEECFDKKETVVQEVPEETCNLEPQRSCKHVTKLVPLLKPAEECVDIPKEVCSRSRKNPRKVQKPVVKKWCYVPSEQSGLA 450 F ICLIAL+ +++ G R +SL+NTFPF+ G A DHH+H HA AA+ R +RQG GD+V LDIGSIAAAGERCIDKVVMVEETEYD+ IECHHSYSERCHTT T ECEENFKKSCFIEY+KV +E+ P P + CET+YHEH+VEDDVV CETIQEEKCEDVTQGYTTEQKCTK WPKQVC NEKK VKKY+P+TECKKV R+LCGPSGC+ QPGPEECFDKKET+VQEVPEE CNLEPQ+SCK VTKLVP LKP EECVD+PKEVCSRSRKNPRKVQKPVVKKWCYVPS SGLA Sbjct: 5 FKCICLIALIGSSAAAGGPRSRIHLVNRDGRSLLNTFPFNDGARGTARAAHADHHEHDHAHAEXPAASDNRLARQGGGDDVPLDIGSIAAAGERCIDKVVMVEETEYDDHIECHHSYSERCHTTYTTDFEPQQEEECEENFKKSCFIEYKKVAVEETVKFCHTPLVCEGEGPEECKTVYESECETKYHEHDVEDDVVNCETIQEEKCEDVTQGYTTEQKCTK----------------------------WPKQVCTNEKKNVKKYSPQTECKKVPRQLCGPSGCVPQPGPEECFDKKETIVQEVPEENCNLEPQKSCKQVTKLVPSLKPVEECVDVPKEVCSRSRKNPRKVQKPVVKKWCYVPSAASGLA 347
BLAST of spt transcription factor family member vs. L. salmonis genes
Match: EMLSAG00000012696 (supercontig:LSalAtl2s:LSalAtl2s963:75556:76657:-1 gene:EMLSAG00000012696 transcript:EMLSAT00000012696 description:"augustus-LSalAtl2s963-processed-gene-0.8") HSP 1 Score: 406.371 bits (1043), Expect = 5.901e-141 Identity = 221/370 (59.73%), Postives = 253/370 (68.38%), Query Frame = 0 Query: 93 FAKICLIALVATASTVSG--------QRRAKSLVNTFPFSQGGAAANHAHDHDHHDHAHAAHPVQAAAPARASRQGQGDEVALDIGSIAAAGERCIDKVVMVEETEYDEEIECHHSYSERCHTTTPPTLSPTGGECEE-NFKKSCFIEYRKVLEDPSPSAT-LPSSARARDP---RNEDRLRCETRYHEHEVEDDVVECETIQEEKCEDVTQGYTTEQKCTKWPKQVPEETCNLEPQRSCKHVTKLKCTKWPKQVCKNEKKTVKKYTPETECKKVGRELCGPSGCLLQPGPEECFDKKETVVQEVPEETCNLEPQRSCKHVTKLVPLLKPAEECVDIPKEVCSRSRKNPRKVQKPVVKKWCYVPSEQSGL 449 F IC IAL+ + + + G R A+SL+NTFPF+ + H+ H++ +A P AA+ R +RQG G++V LDIGSIAAAGERCIDKVVMVEETEY++ IECHHSYSERCHTT P E E NFKKSCFIEY+ V D + P P + CET+YHEH+VEDDVV CETIQEEKCEDVTQGYTTEQKCTK WPKQVC NEKK VKKY+P+TEC KV R+LCGPSGC+ QPGPEE FDKKET+VQEVPEE+CNLEPQ+S K VTKLVP+LKP EECVDIPKEVCSRSRKNPRKV+KPVVKKWCYVPS SGL Sbjct: 5 FKYICFIALIGSTTAIGGPRARTLSFTRDARSLLNTFPFNFEETGTTNTAQHEDHENVNAEXP--AASDNRLARQGGGEDVPLDIGSIAAAGERCIDKVVMVEETEYEDHIECHHSYSERCHTTYITDFEPQQEEECEENFKKSCFIEYKNVAFDETVKFCHTPLVCEGEGPEECKTVYESECETKYHEHDVEDDVVNCETIQEEKCEDVTQGYTTEQKCTK----------------------------WPKQVCTNEKKNVKKYSPQTECNKVPRQLCGPSGCVPQPGPEEXFDKKETIVQEVPEESCNLEPQKSXKQVTKLVPILKPVEECVDIPKEVCSRSRKNPRKVRKPVVKKWCYVPSAASGL 344
BLAST of spt transcription factor family member vs. L. salmonis genes
Match: EMLSAG00000007535 (supercontig:LSalAtl2s:LSalAtl2s433:58038:59212:-1 gene:EMLSAG00000007535 transcript:EMLSAT00000007535 description:"augustus-LSalAtl2s433-processed-gene-1.3") HSP 1 Score: 405.216 bits (1040), Expect = 1.674e-140 Identity = 224/371 (60.38%), Postives = 258/371 (69.54%), Query Frame = 0 Query: 90 MVAFAK-ICLIALVATASTV--SGQRRAKSLVNTFPFSQGGAAANHAHDHDHHDHAHAAHPVQAAAPA--RASRQGQGDEVALDIGSIAAAGERCIDKVVMVEETEYDEEIECHHSYSERCHTTTPPTLSPTGGE-CEENFKKSCFIEYRKV-LEDPSPSATLPSSARARDP---RNEDRLRCETRYHEHEVEDDVVECETIQEEKCEDVTQGYTTEQKCTKWPKQVPEETCNLEPQRSCKHVTKLKCTKWPKQVCKNEKKTVKKYTPETECKKVGRELCGPSGCLLQPGPEECFDKKETVVQEVPEETCNLEPQRSCKHVTKLVPLLKPAEECVDIPKEVCSRSRKNPRKVQKPVVKKWCYVPSEQSGLA 450 MV+ AK ICLIAL+ TA S R +SL+NTFPF+ G A+H+ +H AH + AA + R RQG+GD++ LDIGSIAAAGERCIDKVVMVEETEYD+ IECHHSYSERCHTT P E CEENFKK CFIEY+K+ +++P P P + C TRYHEH+VEDDVV CETIQEEK EDVTQGYTTEQKCTK WPKQVC NEKK VKKY+PET+CKK+ RELCGP+GC+ Q GPEECF+KKET+VQEVPEE C LEPQ+SCK VTKL+P LKP EECVD+PKE+CSRSRKNPR V+KPV+KKWCYVPS SGLA Sbjct: 1 MVSTAKFICLIALIGTAVAFGDSKVRERRSLLNTFPFNDGAHNADHSAEHHEEHDHXEAHELLPAASSESRLGRQGEGDDIPLDIGSIAAAGERCIDKVVMVEETEYDDHIECHHSYSERCHTTYTTDFEPQQEEDCEENFKKDCFIEYKKIAVDEPVEFCHTPLICEGEGPEECKTVYESECRTRYHEHDVEDDVVNCETIQEEKXEDVTQGYTTEQKCTK----------------------------WPKQVCTNEKKNVKKYSPETDCKKIPRELCGPTGCVPQAGPEECFEKKETIVQEVPEELCYLEPQKSCKQVTKLIPTLKPVEECVDVPKEICSRSRKNPRVVKKPVIKKWCYVPSAASGLA 343
BLAST of spt transcription factor family member vs. L. salmonis genes
Match: EMLSAG00000011983 (supercontig:LSalAtl2s:LSalAtl2s853:209507:210793:1 gene:EMLSAG00000011983 transcript:EMLSAT00000011983 description:"augustus-LSalAtl2s853-processed-gene-2.1") HSP 1 Score: 402.519 bits (1033), Expect = 2.193e-139 Identity = 227/372 (61.02%), Postives = 252/372 (67.74%), Query Frame = 0 Query: 96 ICLIALVA---TASTVSGQRRAKSLVNTFPFSQG--GAAANHAHDHDH-------HDHAHAAHPVQAAAPARASRQGQGDEVALDIGSIAAAGERCIDKVVMVEETEYDEEIECHHSYSERCHTTTPPTLSPTGGECEE-NFKKSCFIEYRKV-LEDPSPSATLPSSARARDP---RNEDRLRCETRYHEHEVEDDVVECETIQEEKCEDVTQGYTTEQKCTKWPKQVPEETCNLEPQRSCKHVTKLKCTKWPKQVCKNEKKTVKKYTPETECKKVGRELCGPSGCLLQPGPEECFDKKETVVQEVPEETCNLEPQRSCKHVTKLVPLLKPAEECVDIPKEVCSRSRKNPRKVQKPVVKKWCYVPSEQSGLA 450 ICL AL+ + R +SL+NTFPF+ G G AA+ H+H H H HAH A+ R +RQG GD+ LDIGSIAAAGERCIDKVV+VEETEYD+ IECHHS SERCHT P E E NFKKSCFIEY+KV +E+ P P + CETRYHEH+VEDDVV CETIQEEKCEDVTQGYTTEQKCTK WP+QVC +EKK V KY+P+TECKKV RELCGPSGC+LQPGPEECFDKKET+VQEVPEE CNLEPQ+SCK VTKLVP LKP EECVD+PKEVCSRSRKNPRKVQKPVVKKWCYVPS SGLA Sbjct: 8 ICLFALIGCVMGGRNLRPIRGQRSLLNTFPFNSGERGTAASEDHEHVHEHLAHEEHGHAHDESQEFEASENRLARQG-GDDXPLDIGSIAAAGERCIDKVVVVEETEYDDHIECHHSXSERCHTXYXTDFEPQQEEECEENFKKSCFIEYKKVAVEETIQFCHTPFICEGEGPEECKTVYESECETRYHEHDVEDDVVNCETIQEEKCEDVTQGYTTEQKCTK----------------------------WPRQVCTSEKKNVLKYSPQTECKKVPRELCGPSGCVLQPGPEECFDKKETIVQEVPEENCNLEPQKSCKQVTKLVPSLKPVEECVDVPKEVCSRSRKNPRKVQKPVVKKWCYVPSAASGLA 350
BLAST of spt transcription factor family member vs. L. salmonis genes
Match: EMLSAG00000011986 (supercontig:LSalAtl2s:LSalAtl2s853:248464:249877:1 gene:EMLSAG00000011986 transcript:EMLSAT00000011986 description:"augustus-LSalAtl2s853-processed-gene-2.7") HSP 1 Score: 400.208 bits (1027), Expect = 1.664e-138 Identity = 233/375 (62.13%), Postives = 258/375 (68.80%), Query Frame = 0 Query: 93 FAKICLIALVATAS--------TVSGQRRAKSLVNTFPFSQGGAAANHAHDHDHHDH----AHAAHPVQAAAPARASRQGQGDEVALDIGSIAAAGERCIDKVVMVEETEYDEEIECHHSYSERCHTTTPPTL-SPTGGECEENFKKSCFIEYRKVLEDPSPSAT-LPSSARARDP---RNEDRLRCETRYHEHEVEDDVVECETIQEEKCEDVTQGYTTEQKCTKWPKQVPEETCNLEPQRSCKHVTKLKCTKWPKQVCKNEKKTVKKYTPETECKKVGRELCGPSGCLLQPGPEECFDKKETVVQEVPEETCNLEPQRSCKHVTKLVPLLKPAEECVDIPKEVCSRSRKNPRKVQKPVVKKWCYVPSEQSGLA 450 F ICLIAL+ +A+ T++ R KSL+NTFPF+ G A H+H AHA P AA+ R +RQG GD+V LDIGSIAAAGERCIDKVVMVEETEYD+ IECHHSYSERCHTT ECEENFKKSCFIEY+KV D + P P + CETRYHEH+VEDDVV C+TIQEEKCEDVTQGYTTEQKCTKWPKQ VC +EKK VKKY+P TECKKV R+LCGPSGC+ QPGPEECFDKKET+VQEVPEE CNLEPQ++CK VTKLVP LKP EECVD+PKEVCSRSRKNPRKVQKPVVKKWCYVPS SGLA Sbjct: 5 FKYICLIALIGSAAAAGGPRARTLTVNREGKSLLNTFPFNDGARGTARAAHHEHDHAEHGHAHAEXP--AASDNRLARQGGGDDVPLDIGSIAAAGERCIDKVVMVEETEYDDHIECHHSYSERCHTTYSTDFEPQQEEECEENFKKSCFIEYKKVAVDETVKFCHTPFICEGEGPEECKTVYESECETRYHEHDVEDDVVNCQTIQEEKCEDVTQGYTTEQKCTKWPKQ----------------------------VCTSEKKNVKKYSPITECKKVPRQLCGPSGCVPQPGPEECFDKKETIVQEVPEENCNLEPQKACKQVTKLVPSLKPVEECVDVPKEVCSRSRKNPRKVQKPVVKKWCYVPSAASGLA 349
BLAST of spt transcription factor family member vs. L. salmonis genes
Match: EMLSAG00000011838 (supercontig:LSalAtl2s:LSalAtl2s830:264558:271225:-1 gene:EMLSAG00000011838 transcript:EMLSAT00000011838 description:"augustus-LSalAtl2s830-processed-gene-2.5") HSP 1 Score: 394.815 bits (1013), Expect = 3.917e-136 Identity = 213/368 (57.88%), Postives = 246/368 (66.85%), Query Frame = 0 Query: 96 ICLIALVATASTVSG--------QRRAKSLVNTFPFSQGGAAANHAHDHDHHDHAHAAHPVQAAAPARASRQGQGDEVALDIGSIAAAGERCIDKVVMVEETEYDEEIECHHSYSERCHTTTPPTLSPTGGECEE-NFKKSCFIEYRKVLEDPSPSAT-LPSSARARDP---RNEDRLRCETRYHEHEVEDDVVECETIQEEKCEDVTQGYTTEQKCTKWPKQVPEETCNLEPQRSCKHVTKLKCTKWPKQVCKNEKKTVKKYTPETECKKVGRELCGPSGCLLQPGPEECFDKKETVVQEVPEETCNLEPQRSCKHVTKLVPLLKPAEECVDIPKEVCSRSRKNPRKVQKPVVKKWCYVPSEQSGLA 450 I LIAL+ +A+ G R +SL+NTFPF+ G + + H + + R + QG GD+V LDIG+IAAAGERCIDKVVMVEETEYD+ IECHHSYSERCHTT P E E NFKK+CFIEY+K+ D + P P + CETRYHEH+V+DDVV+CETIQEEKCEDVTQGYTTEQKCTK WPKQVC +EKK VKKY+PETECKKV R+LCGPSGC+ QPGPEECFDK ET++QEVP E CNLEPQ++CK VTKLVP LKP EECVD+PKEVC+RS+KNPRKVQKPVVKKWCYVPS SGLA Sbjct: 23 ILLIALIGSAAAAGGPQARRVTVLRDGRSLLNTFPFNSGARGVGKSLEDHAEGHHEHHQHDEESFGNRLAXQGGGDDVPLDIGAIAAAGERCIDKVVMVEETEYDDHIECHHSYSERCHTTYSTDFEPQQEEECEENFKKNCFIEYKKIAVDETVKFCHTPLVCEGEGPEECKTVYESECETRYHEHDVQDDVVDCETIQEEKCEDVTQGYTTEQKCTK----------------------------WPKQVCTSEKKNVKKYSPETECKKVARQLCGPSGCVPQPGPEECFDKTETIIQEVPXENCNLEPQKACKQVTKLVPNLKPVEECVDVPKEVCARSKKNPRKVQKPVVKKWCYVPSAASGLA 362
BLAST of spt transcription factor family member vs. L. salmonis genes
Match: EMLSAG00000012694 (supercontig:LSalAtl2s:LSalAtl2s963:36350:37490:1 gene:EMLSAG00000012694 transcript:EMLSAT00000012694 description:"augustus-LSalAtl2s963-processed-gene-0.3") HSP 1 Score: 391.734 bits (1005), Expect = 2.933e-135 Identity = 229/371 (61.73%), Postives = 258/371 (69.54%), Query Frame = 0 Query: 90 MVAFAK-ICLIALVATASTV--SGQRRAKSLVNTFPFSQGGAAANH-AHDHDHHDHAHAAHPVQAAAP-ARASRQGQGDEVALDIGSIAAAGERCIDKVVMVEETEYDEEIECHHSYSERCHTT-TPPTLSPTGGECEENFKKSCFIEYRKVLEDPSPSAT-LPSSARARDP---RNEDRLRCETRYHEHEVEDDVVECETIQEEKCEDVTQGYTTEQKCTKWPKQVPEETCNLEPQRSCKHVTKLKCTKWPKQVCKNEKKTVKKYTPETECKKVGRELCGPSGCLLQPGPEECFDKKETVVQEVPEETCNLEPQRSCKHVTKLVPLLKPAEECVDIPKEVCSRSRKNPRKVQKPVVKKWCYVPSEQSGLA 450 MV+ AK IC IAL+ TA S R +SL+NTFPF+ G A+H A H+ HDH A + AA+ +R RQG GD++ LDIGSIAAAGERCIDKVVMVEETEYD+ IECHHSYSERCHTT T + EEN KK CFIEY+KV D + P P + CET+YHEH+VEDDVV CETIQEEKCEDVTQGYTTEQKCTK WPKQVC +EKK VKKY+P+TECKKV R+LCGPSGC+ QPGPEECFDKKET+VQEVPEE CNLEPQ+SCK VTKLVP L P EECVD+PKE+CSRSRKNPR V+KPVVKKWCYVPS SGLA Sbjct: 1 MVSTAKFICFIALIGTAVAFGDSKVRERRSLLNTFPFNDGAHNADHSAEHHEEHDHTQAHELLPAASSESRLGRQGDGDDIPLDIGSIAAAGERCIDKVVMVEETEYDDHIECHHSYSERCHTTYTTDFEPQQEEDXEENXKKECFIEYKKVAVDETVKFCHTPLVCEGEGPEECKTVYESECETKYHEHDVEDDVVNCETIQEEKCEDVTQGYTTEQKCTK----------------------------WPKQVCTSEKKNVKKYSPQTECKKVPRQLCGPSGCVPQPGPEECFDKKETIVQEVPEEFCNLEPQKSCKQVTKLVPTLNPVEECVDVPKEICSRSRKNPRVVKKPVVKKWCYVPSAASGLA 343
BLAST of spt transcription factor family member vs. L. salmonis genes
Match: EMLSAG00000006370 (supercontig:LSalAtl2s:LSalAtl2s348:387469:388765:-1 gene:EMLSAG00000006370 transcript:EMLSAT00000006370 description:"augustus-LSalAtl2s348-processed-gene-2.10") HSP 1 Score: 357.836 bits (917), Expect = 6.728e-122 Identity = 216/373 (57.91%), Postives = 245/373 (65.68%), Query Frame = 0 Query: 88 LKMVAFAKICLIALVATASTVSGQRRAKSLVNTFPFSQGGAAANHAHDHDHHDHAHAAHP--VQAAAPARASRQG---QGDEVALDIGSIAAAGERCIDKVVMVEETEYDEEIECHHSYSERCHTT-TPPTLSPTGGECEENFKKSCFIEYRKVL-EDPSPSATLPSSARARDP---RNEDRLRCETRYHEHEVEDDVVECETIQEEKCEDVTQGYTTEQKCTKWPKQVPEETCNLEPQRSCKHVTKLKCTKWPKQVCKNEKKTVKKYTPETECKKVGRELCGPSGCLLQPGPEECFDKKETVVQEVPEETCNLEPQRSCKHVTKLVPLLKPAEECVDIPKEVCSRSRKNPRKVQKPVVKKWCYVPSEQSGLA 450 L V F + AL A S +R AKSLVN FPF+ G+ N +H H H H V AA +R SRQ G++V LDIGSIAAAGERCIDKVV VEETEYDE IECHHSYSERCHTT T + ECEENFKKSCFIEY+K E+ P P + C TRYHEH+V+DD+V+CETIQEEKCEDVTQGYTTEQKCTK WP+QVC++ ++ VKKY+PETECKKV R+LCGPSGC+ +PG EECF K+E VV E P ETCNLEPQ++CK VTKLVP LKP EECVD+PKEVCSRSRKNPRKV KP VKKWCY PS SGLA Sbjct: 4 LIQVTFFGLVSFAL-AKESPNENKRTAKSLVNVFPFNNRGSRENQNQNHAQHHDHHDGHHDEVANAASSRDSRQNFLPPGNDVPLDIGSIAAAGERCIDKVVTVEETEYDEHIECHHSYSERCHTTYTTDFEAQQEEECEENFKKSCFIEYKKTAHEEEVQFCHTPFICEGEGPEECKTVFETECSTRYHEHDVQDDIVDCETIQEEKCEDVTQGYTTEQKCTK----------------------------WPRQVCQSRRENVKKYSPETECKKVPRQLCGPSGCVARPGQEECFPKREVVVVEEPVETCNLEPQKACKQVTKLVPSLKPTEECVDVPKEVCSRSRKNPRKVLKPXVKKWCYXPSAASGLA 347
BLAST of spt transcription factor family member vs. L. salmonis genes
Match: EMLSAG00000011988 (supercontig:LSalAtl2s:LSalAtl2s853:284743:286700:-1 gene:EMLSAG00000011988 transcript:EMLSAT00000011988 description:"snap-LSalAtl2s853-processed-gene-2.67") HSP 1 Score: 344.354 bits (882), Expect = 4.973e-117 Identity = 201/338 (59.47%), Postives = 224/338 (66.27%), Query Frame = 0 Query: 93 FAKICLIALVATASTVSG--------QRRAKSLVNTFPFSQG--GAAANHAHDHDHHDHAHAAHPVQAAAPARASRQGQGDEVALDIGSIAAAGERCIDKVVMVEETEYDEEIECHHSYSERCHTT-TPPTLSPTGGECEENFKKSCFIEYRKVLEDPSPSAT-LPSSARARDP---RNEDRLRCETRYHEHEVEDDVVECETIQEEKCEDVTQGYTTEQKCTKWPKQVPEETCNLEPQRSCKHVTKLKCTKWPKQVCKNEKKTVKKYTPETECKKVGRELCGPSGCLLQPGPEECFDKKETVVQEVPEETCNLEPQRSCKHVTKLVPLLKPAEECVD 415 F ICLIAL+ + + G R KSL+NTFPF+ G G A H+H H +H H Q A+ R +RQG GD+V LDIGSIAAAGERCIDKVVMVEETEYD+ IECHHSYSERCHTT T ECEENFKKSCFIEY+KV D + P P + CETRYHEH+VEDDVV CETIQEEKCEDVTQGYTTEQKCTK WPKQVC NEKK VKKY+P TECKKV R+LCGPSGC+ QPGPEECFDKKET+VQEVPEE CNLEPQ++CK VTKLVP LKP EEC++ Sbjct: 5 FKYICLIALIGSTAAAGGPRARTLTVNRAGKSLLNTFPFNDGARGTARAAHHEHAHAEHNHXHAEXQXASDNRLARQGGGDDVPLDIGSIAAAGERCIDKVVMVEETEYDDHIECHHSYSERCHTTYTTDFEPQQEEECEENFKKSCFIEYKKVAVDETVKFCHTPLVCEGDGPEECKTVYESECETRYHEHDVEDDVVNCETIQEEKCEDVTQGYTTEQKCTK----------------------------WPKQVCTNEKKNVKKYSPITECKKVPRQLCGPSGCVPQPGPEECFDKKETIVQEVPEENCNLEPQKACKQVTKLVPSLKPVEECIN 314
BLAST of spt transcription factor family member vs. nr
Match: gi|1325302888|ref|XP_023333013.1| (uncharacterized protein LOC111704874 [Eurytemora affinis]) HSP 1 Score: 158.303 bits (399), Expect = 2.371e-39 Identity = 99/279 (35.48%), Postives = 145/279 (51.97%), Query Frame = 0 Query: 176 GERCIDKVVMVEETEYDEEIECHHSYSERCHTTTPPTLSPTGGE-CEENFKKSCFIEYR--------KVLEDPSPSATLPSSARARDPRNEDRLRCETRYHEHEVEDDVVECETIQEEKCEDVTQGYTTEQKCTKWPKQVPEETCNLEPQRSCKHVTKLKCTKWPKQVCKNEKKTVKKYTPETECKKVGRELCGPSGCLLQPGPEECFDKKETVVQEVPEETCNLEPQRSCKHVTKLVPLLKPAEECVDIPKEVCSRSRKNPRKVQKPVVKKWCYVPSE 445 G +C+ KV+ VEE +D I+C HS++E+CH T +P+ E C +F+K+C I Y+ ++ ++P S R E CETRY H VE D C+ + E+KC+ V + + + + E R ++ C +WP Q C EKKTV K PET C+K +E+C S C + C ++ ++VQ +P E C+LEP+ +CK T LVP L CV +PKE+C + NP KV KPVVK+WCY P + Sbjct: 224 GVKCVKKVMQVEEIVHDNIIKCSHSFTEKCHNTFITDYAPSQEEKCSTSFEKNCKITYQPMAFDEKVEICDEPLKKVCNDSITGEEVCRTEYETSCETRYKIHTVEQDEPVCKMVMEKKCDGVVVDNQDQANNGRRRRSIARIENGEEFIRQAEN-----CEEWPVQKCTLEKKTVTKSNPETSCQKHPKEVCTTSNCKFVRSEKTCREETRSLVQNIPSEDCDLEPRETCKLETVLVPRLVEKPNCVQVPKEICVEGKTNPTKVSKPVVKEWCYRPQD 497
BLAST of spt transcription factor family member vs. nr
Match: gi|1325270299|ref|XP_023319728.1| (uncharacterized protein LOC111694904 [Eurytemora affinis]) HSP 1 Score: 136.732 bits (343), Expect = 2.053e-33 Identity = 106/254 (41.73%), Postives = 132/254 (51.97%), Query Frame = 0 Query: 98 LIALVATASTVSGQ---------RRAKSLVNTFPFSQGGAAANHAHDHDHHDHAHAAHPVQAAAPARASRQGQGDEVA-LDIGSIAAA-----GERCIDKVVMVEETEYDEEIECHHSYSERCHTTTPPTL-SPTGGECEENFKKSCFIEYRKVLEDPSPSAT---LPSSARARDP---RNEDRLRCETRYHEHEVEDDVVECETIQEEKCEDVTQGYTTEQKCTKWPKQVPEETCNLEPQRSCKHVTKLKCTK 329 LI L S+ + + R+ KSL+NTFPF+ A HA +H HA P PAR + QG + + G +AAA G+RCIDKV MVEETEYDE ++C HSY RCHTT S ECEENF+K+CFI+Y K+ + + L P R E C T+ EH+V+DDVV CETIQ+EKC D T GYTT C K VP+ LEP C V K CT+ Sbjct: 4 LIVLALVGSSFAARQLQAQGTLRRQEKSLLNTFPFN----AKQHA---EHQAHASEREP-SVNIPARDALQGADTGLGGVAFGDVAAAKAGSDGKRCIDKVEMVEETEYDEVVQCDHSYDRRCHTTYVTNYESQQEEECEENFRKNCFIDYEKIAFNETVEVCRTPLVKDCDVSGPEICRTEYESECWTKQEEHDVQDDVVTCETIQDEKCADETSGYTT---CAHVTKLVPK----LEPTEECVDVPKEVCTR 242 HSP 2 Score: 81.2629 bits (199), Expect = 1.249e-13 Identity = 43/55 (78.18%), Postives = 50/55 (90.91%), Query Frame = 0 Query: 396 SCKHVTKLVPLLKPAEECVDIPKEVCSRSRKNPRKVQKPVVKKWCYVPSEQSGLA 450 +C HVTKLVP L+P EECVD+PKEVC+RSR NPRKV+KPVVKKWCY+PS +SGLA Sbjct: 215 TCAHVTKLVPKLEPTEECVDVPKEVCTRSRTNPRKVKKPVVKKWCYIPSAESGLA 269
BLAST of spt transcription factor family member vs. nr
Match: gi|1325293616|ref|XP_023330310.1| (uncharacterized protein LOC111702768 [Eurytemora affinis]) HSP 1 Score: 117.472 bits (293), Expect = 3.578e-26 Identity = 91/311 (29.26%), Postives = 133/311 (42.77%), Query Frame = 0 Query: 138 HHDHAHAAHPVQAAAPARASRQGQGDEVALDIGSIAAAGER---CIDKVVMVEETEYDEEIECHHSYSERCHTTTPPTLSPTGGE-CEENFKKSCFIEYRKVLEDPSPSATLPSSARARDPRNEDRLRCETRYHEHEVEDDVVECETIQEEKCEDVTQGYTTEQKCTKWPKQVPEETCNLEPQRSCKHVTKLKCTKWPKQVCKNEKKTVKKYTPETECKKVGRELCGPSGCLLQPGPEECFDKKETVVQEVPEETCNLEPQRSCKHVTKLVPLLKPAEECVDIPKEVCSRSRKNPRKVQKPVVKKWCYVPS 444 +HDHAH + V R+ RQ Q +D E C+DKV V E + +EC H E+CH T +PT E CEENF+K +C+ + + + V +KC K +V CN + C+ V + C K +K K+ +T C+K+ E+CG +GC + G EEC DK + EVPEE C+L PQ++C+ TKLVP L P +C +PKE C+ P++V KP++ +WC P+ Sbjct: 23 NHDHAHGQNGV--IQQFRSGRQEQSTPGGVDFSGCVTDNESGLCCVDKVEEVTSLEKEPILECTHKNVEQCHYTYITQFTPTQEEVCEENFEK----------------------------------QCQITFKQQAFNETV---------------------KKCYKPITKV----CNGQGPEECRTVYESSCAT------KYIEKQPGKFVGDTSCEKLPVEICG-AGCTYEEGAEECHDKTIASLVEVPEEVCDLNPQKTCRFTTKLVPKLMPEHQCTIVPKETCNLKFSQPKQVPKPLLTRWCLDPT 265
BLAST of spt transcription factor family member vs. nr
Match: gi|1325325680|ref|XP_023344688.1| (uncharacterized protein LOC111713931 [Eurytemora affinis]) HSP 1 Score: 108.612 bits (270), Expect = 1.260e-22 Identity = 84/295 (28.47%), Postives = 128/295 (43.39%), Query Frame = 0 Query: 154 ARASRQGQGDEVALDIGSIAAAGER---CIDKVVMVEETEYDEEIECHHSYSERCHTTTPPTLSPTGGE-CEENFKKSCFIEYRKVLEDPSPSATLPSSARARDPRNEDRLRCETRYHEHEVEDDVVECETIQEEKCEDVTQGYTTEQKCTKWPKQVPEETCNLEPQRSCKHVTKLKCTKWPKQVCKNEKKTVKKYTPETECKKVGRELCGPSGCLLQPGPEECFDKKETVVQEVPEETCNLEPQRSCKHVTKLVPLLKPAEECVDIPKEVCSRSRKNPRKVQKPVVKKWCYVPS 444 AR+ RQ + +D E C++K V E + +EC H E+CH + +P+ E CEENF+K+ C+ + + + V +KC K +V CN + C+ V + CT K +K K+ +T C+K+ E+CG +GC + G EEC DK T + +VPEE C+L PQ+ CK +TKLVP LKP +C +PKE C+ P+++ KP++ KWC P+ Sbjct: 28 ARSGRQETAIQGGIDFSGCVQDSETGLCCVEKEETVTSLEKEPILECTHKNVEQCHYSYVTQFTPSQEEVCEENFEKT----------------------------------CQITFKQQAFNETV---------------------KKCYKPVTKV----CNGQGPEECRTVYESACTT------KYVEKQPGKFVGDTSCEKLPVEICG-AGCTFEEGDEECHDKVITSLVDVPEEVCDLNPQKVCKFITKLVPKLKPEHQCTLVPKETCTLKFTQPKQIPKPLLTKWCLDPT 256
BLAST of spt transcription factor family member vs. nr
Match: gi|1325314111|ref|XP_023338732.1| (uncharacterized protein LOC111709324 isoform X1 [Eurytemora affinis]) HSP 1 Score: 102.834 bits (255), Expect = 4.874e-21 Identity = 55/137 (40.15%), Postives = 82/137 (59.85%), Query Frame = 0 Query: 308 EETCNLEPQRSCKHVTKLKCTKWPKQVCKNEKKTVKKYTPETECKKVGRELCGPSGCLLQPGPEECFDKKETVVQEVPEETCNLEPQRSCKHVTKLVPLLKPAEECVDIPKEVCSRSRKNPRKVQKPVVKKWCYVPS 444 E+ CN + C+ V + CT K +K K+ +T C+K+ E+CG +GC + GPEEC DK + +VPEE C+L PQ++CK TKLVP LKP +C +P+EVC+ P++V KP++ +WC P+ Sbjct: 131 EKVCNGQGPEECRTVYESSCTT------KYVEKQPGKFVGDTSCEKLPVEICG-AGCTYEEGPEECHDKVIASLVDVPEEVCDLNPQKTCKLTTKLVPKLKPEHQCTIVPQEVCNLKFSQPKQVPKPLLTRWCLDPT 260 HSP 2 Score: 65.4698 bits (158), Expect = 4.090e-8 Identity = 62/210 (29.52%), Postives = 89/210 (42.38%), Query Frame = 0 Query: 154 ARASRQGQGDEVALDIGSIAA---AGERCIDKVVMVEETEYDEEIECHHSYSERCHTTTPPTLSPTGGE-CEENFKKSCFIEYRKVLEDPS------PSATLPSSARARDPRNEDRLRCETRYHEHEVEDDV--VECETIQEEKCEDVTQGYTTEQ-------KCTKWPKQVPEETCNLEPQRSCKHVTKL--------KCTKWPKQVCK 336 R RQ G +D G C+DK+ V + D +EC H +E+CH T +P E CEENF+KSC I +++ + + P + + + R C T+Y E + V CE + E C G T E+ K VPEE C+L PQ++CK TKL +CT P++VC Sbjct: 32 VRGGRQAGGIPGGVDFSGCVQDQDTGLCCVDKIEEVTTLQKDPILECTHKNTEQCHYTYVTQFTPAQEEVCEENFEKSCQITFKQQAFNETVKKCYKPVEKVCNGQGPEECRTVYESSCTTKYVEKQPGKFVGDTSCEKLPVEIC---GAGCTYEEGPEECHDKVIASLVDVPEEVCDLNPQKTCKLTTKLVPKLKPEHQCTIVPQEVCN 238 The following BLAST results are available for this feature:
BLAST of spt transcription factor family member vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 25
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BLAST of spt transcription factor family member vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 0
BLAST of spt transcription factor family member vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold511_size151351:4788..9071+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold511_size151351-snap-gene-0.23 ID=maker-scaffold511_size151351-snap-gene-0.23|Name=spt transcription factor family member|organism=Tigriopus kingsejongensis|type=gene|length=4284bp|location=Sequence derived from alignment at scaffold511_size151351:4788..9071+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'spt transcription factor family member' has the following synonyms
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