coatomer subunit alpha isoform 11, maker-scaffold52_size450388-snap-gene-3.20 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of coatomer subunit alpha isoform 11 vs. L. salmonis genes
Match: EMLSAG00000004199 (supercontig:LSalAtl2s:LSalAtl2s221:488387:561813:1 gene:EMLSAG00000004199 transcript:EMLSAT00000004199 description:"maker-LSalAtl2s221-augustus-gene-5.19") HSP 1 Score: 1637.08 bits (4238), Expect = 0.000e+0 Identity = 794/1100 (72.18%), Postives = 905/1100 (82.27%), Query Frame = 0 Query: 12 LRKKNVSPGLSAMDDHMKS----GTGTDLFGQADCVVKHVLEGHDRGVNWASFHPSMPLIVSGADDRQIKLWRMNDSK----------------AWEVDTCRGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTAKRTCLHTFRREHDRFWIVAAHPTLNLFAAGHDSGMVVFKLERERPAHALHGNLLYYVKDKYLRKLDFTTQKDKAVLQLRGGSRSLVYSMSYNPAENAVVLVTRSSNLENSVYDLYTIPKDSDGQTPDAPEGKRSSGVTAIWVARNRIAVLDRSHTLIIKNMKNEVTKKVQTPNCDEIFYAGTGMLLLRDNDSVTLFDVQQKRNLGNVKIPKCRYVIWSPDMTTVALLSKHNITICNRKLQSLCSIHENTRVKSGTWDDTGVFIYTTSNHIKYAITNGDHGIIRTLNLPVYLTRIKGDKVFLLDRECKPCTMTIDTTEYRFKLALINRKYDEVLHMVRNAKLVGQSIIGYLQKKGYPEVALHFVKDEKTRFALALECMDIEVALEAAKALDDKDCWDKLSESALMLGNHQVVEMCYQRTKNFDKLSFLYLITGNLEKLRKMMKIAEIRKDHSGHFQNALYLGDVPERVKILKNCGQTSLAYLTAKTHGMDEEAEDIKSGVDPDTPLPEPTGNGVPIVPPQPKSQMEENWPLLTVSKGFFEGIRAVRS---GGGAKAAGGTGALAMEDTD---MDEGAGAGWGDDDLGLDGDEEAVGGEDDFKSADGEEGPGEGDGGWDVDDGDLELPAELDGGTGSNVNTGATGDEDEGYFAPPTKGQSPAQNWASNSALPVDHIVAGSFESACRLLHDQVGVVNFEPYKSFFMTDFARGRTSFVALPALPALHGYPQSNWKEAGPKNGLPAVGLKLNHLVQRLQTCYQLTTAGKFSDAITKFRNILLSIPLLVVETKQDEAEAVQLREICMNYLVGLTMETKRKEMPKSSLEEQIRVCEMAAYFSHCHLQPVHQILTLRTACNLFFKLKNFKTAGSFARRLLELGPKPEVAQQTRKILQACDKNPTDEHKLAYDEFNPFDIDAVEYSPIYRGAEKVECPFCSAKYSPQAANTVCAVCTVGQVAKSTQGLKIRRKI 1085 LRKKNV+ G + +KS TDLFG A CVVKHV GHDRGVNWASFHP+MPLIVSGADDRQIKLWRMN+SK AWEVDTCRGHYNNVS V+FHPRQDLI+SNSED++IRVWDTAKRTC++TFRREHDRFW++++HPTLNLFAAGHDSGMVVFKLERERPA+ALHGN+LYYVK++YLRKLDFTT KDK V+QLRGG+RS VYS+SYN AE+AV+ TR+S LENS+YDLY+IPKD D PD PEGKRS G+TA+WVARNR AVLDRSH+LIIKN+KNE+TKK+QTPNC EIF AGTGMLLLRD++ VTLFDVQQKRN+G+VKIPKCRYVIWS DM+TVALLSKH I IC++KL+ LC+I+ENTRVKS TWDD+GV IYTTSNHIKYAITNGDHGIIRTL+LP+YLTRIKG +VF LDRECKP + ID TEY+FKLALINRKYDEVLHMVRNAKLVGQSIIGYLQKKGYPEVALHFVKDEKTRFALALEC DI+ A+EAAKALDDK+CW+ L E+ALM GN QVVE+CYQRTKNFDKLSFLYLITGNLEKLRKMMKIAEIRKD S HFQ ALYLGDV ERVK+LKNC Q LAYLTAKTHG++EEAE+IK+ + DT LPEP + + P +P + NWP LTVSKGFFEGI+AVRS GGG G G LAME+ + +DEGA WG DDLGL+ D+ E++FK A + E D GWDVDD DLELPA+LD V DEGYF PPTKG++P Q W +NS LPVDHIVAG FESA RLLHDQVGVVNFEPY+S FM +F+R RT F ALP LP+L+GYPQSNW++ K+GLPAVG+K+ LV RLQTCYQ TT+GKF DA+ K R+I+ +IPLLVVETK DEAEA ++R I NYLVGL ME+ RKE+PK SLEEQ R+CEMAAYF+HC+LQP+HQILTLRTACNLFFKLKNFKT+GSFARRLLELGPKPEVA QTRKILQACDKNP DEHK+ YDEFNPFDI ++PIYRG K +CPFC AK+ P+ N +C +C GQ+ KS QGLKIRRKI Sbjct: 167 LRKKNVALGPDDVHHSLKSTGSAANNTDLFGVAXCVVKHVXXGHDRGVNWASFHPTMPLIVSGADDRQIKLWRMNESKVDLRLGGKHLGIGTVGAWEVDTCRGHYNNVSCVLFHPRQDLIISNSEDRTIRVWDTAKRTCINTFRREHDRFWVISSHPTLNLFAAGHDSGMVVFKLERERPAYALHGNILYYVKERYLRKLDFTTSKDKPVMQLRGGTRSPVYSLSYNQAEDAVLCCTRNSTLENSIYDLYSIPKDFDSSNPDTPEGKRSPGLTAVWVARNRFAVLDRSHSLIIKNLKNELTKKIQTPNCSEIFPAGTGMLLLRDSEFVTLFDVQQKRNMGSVKIPKCRYVIWSNDMSTVALLSKHVILICDKKLELLCTINENTRVKSATWDDSGVLIYTTSNHIKYAITNGDHGIIRTLDLPIYLTRIKGSQVFCLDRECKPRILNIDPTEYKFKLALINRKYDEVLHMVRNAKLVGQSIIGYLQKKGYPEVALHFVKDEKTRFALALECSDIDAAMEAAKALDDKECWESLGEAALMEGNIQVVEVCYQRTKNFDKLSFLYLITGNLEKLRKMMKIAEIRKDTSAHFQTALYLGDVRERVKVLKNCDQKILAYLTAKTHGLEEEAEEIKASLPEDTKLPEPNPDAKLLQPCRPAMPDDSNWPRLTVSKGFFEGIKAVRSSGVGGGVVNKAGVGKLAMEEEEEVPLDEGA---WG-DDLGLEEDD-----ENEFKDAVEDGNKSENDAGWDVDDDDLELPADLDPSPSKVV-------VDEGYFVPPTKGKNPTQLWLNNSQLPVDHIVAGCFESAFRLLHDQVGVVNFEPYRSNFMANFSRSRTWFQALPGLPSLNGYPQSNWRDGSSKSGLPAVGVKMTDLVSRLQTCYQFTTSGKFGDAVDKLRSIVYTIPLLVVETKPDEAEAQEMRTIVSNYLVGLIMESMRKELPKGSLEEQKRLCEMAAYFTHCNLQPIHQILTLRTACNLFFKLKNFKTSGSFARRLLELGPKPEVASQTRKILQACDKNPVDEHKVEYDEFNPFDICGRSFTPIYRGQAKEDCPFCLAKFKPEFKNELCNICNAGQIGKSVQGLKIRRKI 1250 HSP 2 Score: 58.151 bits (139), Expect = 1.636e-8 Identity = 30/79 (37.97%), Postives = 42/79 (53.16%), Query Frame = 0 Query: 48 LEGHDRGVNWASFHPSMPLIVSGADDRQIKLWRMNDSKAWEVDTCRGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTA 126 L GH + F P ++S +DD+ I++W V T HY V S FHP +DL+VS S D+S+RVWD + Sbjct: 89 LLGHLDYIRXTFFXHEYPXVLSASDDQTIRIWNWQSRSCVSVLTGHNHY--VMSASFHPSEDLLVSASLDQSVRVWDIS 165 HSP 3 Score: 52.7582 bits (125), Expect = 6.342e-7 Identity = 33/141 (23.40%), Postives = 61/141 (43.26%), Query Frame = 0 Query: 42 CVVKHVLEGHDRGVNWASFHPSMPLIVSGADDRQIKLWRMNDSKAWEVDTCR----GHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTAKRTCLHTFRREHDRFWIVAAHPTLNLF-AAGHDSGMVVFKLERERPAHALHG 177 C + + H+ H PL VSG DD +IK+W +++ C GH + + F ++S S+D++IR+W+ R+C+ + + HP+ +L +A D + V+ + R + G Sbjct: 41 CXLLEKFDEHEGPXXGIXXHKXQPLFVSGGDDYKIKVWN------YKLKRCLFQLLGHLDYIRXTFFXHEYPXVLSASDDQTIRIWNWQSRSCVSVLTGHNHYVMSASFHPSEDLLVSASLDQSVRVWDISGLRKKNVALG 175
BLAST of coatomer subunit alpha isoform 11 vs. L. salmonis genes
Match: EMLSAG00000000903 (supercontig:LSalAtl2s:LSalAtl2s1157:9447:26512:1 gene:EMLSAG00000000903 transcript:EMLSAT00000000903 description:"maker-LSalAtl2s1157-augustus-gene-0.18") HSP 1 Score: 118.242 bits (295), Expect = 3.585e-27 Identity = 142/624 (22.76%), Postives = 266/624 (42.63%), Query Frame = 0 Query: 48 LEGHDRGVNWASFHPS--MPLIVSGADDRQIKLWRMNDSKAWEVDTCRGHYNNVSS---------------------VIFHPRQDLIVSNSEDKSIRVWDTAKRTCLHTFRREHDRFWIVAAHPTLNLFAAGHDSGMVVFKLERERPAHALHGN-LLYYVKDKYLRKLDFTTQKDKAVLQLRGGSRSLVYSMSYNPAENAVVLVTRSSNLENSV------YDLYTIPKDSDGQTPDAPEGKRSSGVTAIWVAR-NRIAVLDRSHTL-IIKNMKNEVTKKVQTPNCDEIFYAGTGMLLLRDNDSVTLFDVQQKRNLGNVKIPKCRYVIWSPDMTTVALLSKHNITICNRKLQSLCSIHENTR--------------------VKSGTWDDTGVFIYTTS-NHIKYAITNGDHGIIRTLNLPVY-LTRIKGD-KVFLLDRECKPCTMTIDTTEYRFKLALINRKY---DEVLHMV-RNAKLVGQSIIGYLQKKGYPEVALHFVKDEKTRFALALECMDIEVALEAAKALDDKDCWDKLSESALMLGNHQVVEMCYQRTKNFDKLSFLYLITGNLEKLRKMMKIAEIRKDHSGHFQNALYLGDVPERVKILKNCGQTSLAYLTAKTH 612 LEGHD+GVN ++ + P ++SGADDR +K+W + V T GH N++S V FHP +I++ SED ++R+W + +T +R W +++ N + G+D G ++ KL RE PA ++ + + + K L++ + T D + L+ G + E +T +SN V Y +YT + A E +W A + A+ + S TL + KN K + + K + E Y G ML ++ + +D + + ++ + R V WS + VAL++ I + + + E + V++G W FIYT S N + Y + G+ I L+ +Y L I D K++L D+E + + + ++ A++ R + D+VL ++ R+ ++ + +L+K+G+ + AL D + +F LA+ D++ A + W +L+E + + + + C + K+F L L GN + + A + F ++ +G++ + IL + + A ++T+ Sbjct: 181 LEGHDKGVNCLDYYHAGDKPYLISGADDRSVKIWDYQNKNC--VQTLEGHAQNIASGKADTTCFLFSFIPKHFFHSKVCFHPELPIILTGSEDGTVRIWHASTYRLENTLNYGLERVWSISSLKGSNNVSIGYDEGSILVKLGREEPAMSMDSSGKIVWAKHSELQQGNLKTLGD---VDLKDGETLPISVKDMGSCEIYPQTITHNSNGRFVVVCGDGEYIIYTAMALRNKSFGSAQE--------FVWAAESSEYAIRENSSTLKVFKNFKEKQSLKPEFG--IESIYGGC-MLGVKSPSGLAFYDWETLELIRRIE-TQPRSVCWSDNGELVALITDECYFILRYQKEIVAYARETKQNVSDDGIEEAFEVLSENPECVRTGVWIG-DCFIYTNSLNRLNYYV-GGEIVTISHLDRTMYILGYIPSDNKLYLGDKELHVVSFQLLLSVLEYQTAVMRRDFDTADKVLPVIPRDQRI---RVAHFLEKQGFKKQALVVTSDLEHKFELAICLGDLKTAQSLVIENPGEQKWKQLAELXIANADFDLAQSCLKEAKDFGGLLLLATSLGNNLVINYLSNSAAQLGRKNISFISSFLMGNLENCLDILISTNRLPEAAFFSRTY 782 HSP 2 Score: 53.1434 bits (126), Expect = 3.967e-7 Identity = 32/95 (33.68%), Postives = 50/95 (52.63%), Query Frame = 0 Query: 48 LEGHDRGVNWASFHPSMPLIVSGADDRQIKLWRMNDSKAWEVDTC-RGHYNNVSSVIFHPR-QDLIVSNSEDKSIRVWDTAKRTCLHTFRREHDR 140 LE H + + HPS PL++S +DD IKLW N KAW + GH + + V+ +P+ + S S D++I+VW +C + HD+ Sbjct: 95 LEAHSDYLRSLAVHPSEPLVLSSSDDMLIKLW--NWDKAWACEQVFEGHTHYIMQVVINPKDNNXFASASLDRTIKVWHLGA-SCPNFTLEGHDK 186
BLAST of coatomer subunit alpha isoform 11 vs. L. salmonis genes
Match: EMLSAG00000006041 (supercontig:LSalAtl2s:LSalAtl2s327:367648:370815:1 gene:EMLSAG00000006041 transcript:EMLSAT00000006041 description:"maker-LSalAtl2s327-augustus-gene-3.42") HSP 1 Score: 68.5514 bits (166), Expect = 1.632e-12 Identity = 33/103 (32.04%), Postives = 55/103 (53.40%), Query Frame = 0 Query: 46 HVLEGHDRGVNWASFHPSMPLIVSGADDRQIKLWRMNDSKAWEVDTCRGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTAKRTCLHTFRREHDRFWIVAAHP 148 H LEGH + +F +++G+DD +KL+ ++ + T GH + V SV F P + VS S D+S++VW++ + C+HTF D+ W + P Sbjct: 187 HALEGHALPIRSLAFSKDSKRLLTGSDDGHMKLYEVSHGSL--IGTLSGHTSWVLSVQFSPDNEXFVSGSSDRSVKVWESTTKQCVHTFTDHSDQVWAASYSP 287
BLAST of coatomer subunit alpha isoform 11 vs. L. salmonis genes
Match: EMLSAG00000001111 (supercontig:LSalAtl2s:LSalAtl2s1186:117586:119588:-1 gene:EMLSAG00000001111 transcript:EMLSAT00000001111 description:"maker-LSalAtl2s1186-snap-gene-1.40") HSP 1 Score: 67.0106 bits (162), Expect = 9.658e-12 Identity = 33/104 (31.73%), Postives = 57/104 (54.81%), Query Frame = 0 Query: 36 LFGQADCVVKHVLEGHDRGVNWASFHPSMPLIVSGADDRQIKLWRMNDSKAWEVDTCRGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTAKRTCLHTFRREHD 139 ++G D + + GH G++ ++ L+VS +DD+ +K+W ++ K + T +GH N V F+P+ +L+VS S D+S+R+WD CL T D Sbjct: 56 VWGSYDGKFEKTISGHKLGISDVAWSSDSRLLVSASDDKTLKIWELSSGKC--LKTLKGHSNYVFCCNFNPQSNLVVSGSFDESVRIWDVRTGKCLKTLPAHSD 157 HSP 2 Score: 60.8474 bits (146), Expect = 9.846e-10 Identity = 39/137 (28.47%), Postives = 67/137 (48.91%), Query Frame = 0 Query: 44 VKHVLEGHDRGVNWASFHPSMPLIVSGADDRQIKLWRMNDSKAWEVDTCRGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTAKRTCLHTFRREHDRFWIVAAHPTLNLFAAG-HDSGMVVF-----KLERERPAHA 174 +K L GH +GV+ F P+ + S + D+ IK+W D K T GH +S V + L+VS S+DK++++W+ + CL T + + + +P NL +G D + ++ K + PAH+ Sbjct: 22 LKFTLAGHTKGVSAVKFSPNGEWLASSSADKLIKVWGSYDGKF--EKTISGHKLGISDVAWSSDSRLLVSASDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLVVSGSFDESVRIWDVRTGKCLKTLPAHS 156 HSP 3 Score: 58.5362 bits (140), Expect = 5.317e-9 Identity = 33/88 (37.50%), Postives = 48/88 (54.55%), Query Frame = 0 Query: 47 VLEGHDRGVNWASFHPSMPLIVSGADDRQIKLWRMNDSKAWEVDTCRGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTAKRTCLHTF 134 L+GH V +F+P L+VSG+ D +++W + K + T H + VS+V F+ LIVS+S D R+WDTA CL T Sbjct: 109 TLKGHSNYVFCCNFNPQSNLVVSGSFDESVRIWDVRTGKC--LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGXCRIWDTASGQCLKTL 194
BLAST of coatomer subunit alpha isoform 11 vs. L. salmonis genes
Match: EMLSAG00000003976 (supercontig:LSalAtl2s:LSalAtl2s213:19395:20797:-1 gene:EMLSAG00000003976 transcript:EMLSAT00000003976 description:"augustus_masked-LSalAtl2s213-processed-gene-0.0") HSP 1 Score: 59.6918 bits (143), Expect = 1.838e-9 Identity = 36/89 (40.45%), Postives = 52/89 (58.43%), Query Frame = 0 Query: 47 VLEGHDRGVNWASFHPSMPLIVSGADDRQIKLWRMNDSKAWE-VDTCRGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTAKRTCLHTF 134 L+GH V F L+VS + D IK+W D + +E + T +GH +NVSSV F P D I+S S DK+I++W+TA C+ T+ Sbjct: 117 TLKGHTDCVQDIGFDSPGKLLVSCSADMSIKIW---DFQTYECLKTLQGHDHNVSSVCFTPNGDYILSASRDKTIKMWETATGYCVRTY 202 HSP 2 Score: 53.1434 bits (126), Expect = 2.281e-7 Identity = 28/77 (36.36%), Postives = 44/77 (57.14%), Query Frame = 0 Query: 65 PLIVSGADDRQIKLWRMNDSKAWEVDTCRGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTAKRTCLHTFRREHDRF 141 P + SG+ D+ IK+W ++ + + T GH N V +++HP ++S S+DK+IRVWD A + C H H F Sbjct: 283 PFLASGSRDKTIKVWDVSTGQV--LFTYVGHDNWVRGLVWHPGGKYLLSASDDKTIRVWDIAHKRC-HKRLDSHSHF 356 HSP 3 Score: 51.6026 bits (122), Expect = 7.346e-7 Identity = 34/103 (33.01%), Postives = 52/103 (50.49%), Query Frame = 0 Query: 37 FGQADCVVKHVLEGHDRGVNWASFHPSMPLIVSGADDRQIKLWRMNDSKAWEVDTCRGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTAKRTCLHTFRREHD 139 F +C+ L+GHD V+ F P+ I+S + D+ IK+W + + V T GH V +V L+ S S D+S+RVW T+ + C R+HD Sbjct: 151 FQTYECL--KTLQGHDHNVSSVCFTPNGDYILSASRDKTIKMWET--ATGYCVRTYTGHREWVRNVRVLHDGSLLASCSNDQSVRVWSTSTKDCKDEL-RDHD 248
BLAST of coatomer subunit alpha isoform 11 vs. L. salmonis genes
Match: EMLSAG00000003570 (supercontig:LSalAtl2s:LSalAtl2s1961:13609:15847:-1 gene:EMLSAG00000003570 transcript:EMLSAT00000003570 description:"maker-LSalAtl2s1961-augustus-gene-0.14") HSP 1 Score: 59.6918 bits (143), Expect = 3.412e-9 Identity = 34/152 (22.37%), Postives = 74/152 (48.68%), Query Frame = 0 Query: 13 RKKNVSPGLSAMDDHMKSGTGTDLFGQADCVVKHVLEGHDRGVNWASFHPSMPLIVSGADDRQIKLWRMNDSKAWEVDTCRGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTAKRTCLHTFRREHDRFWIVAAHPTLN-LFAAGHDSGMVV 163 R++ S GL T T L + V + G+ + + +P+ L+VSG+ ++ ++ W S ++ +GH +NV ++I + L +S S D + ++W ++ C+ T+ R + W + A+ + +++AG D +++ Sbjct: 124 REQVASAGLDKSIYLWDINTLTALTASNNTVTTSSVSGNKDSIYSLAMNPAGTLLVSGSSEKTLRFWDPRTSA--KLAKLKGHTDNVKALILNREGTLCISGSSDGTFKLWSIGEQRCIATYYRHTEGVWALQANESFTRVYSAGRDKNIIL 273
BLAST of coatomer subunit alpha isoform 11 vs. L. salmonis genes
Match: EMLSAG00000001730 (supercontig:LSalAtl2s:LSalAtl2s129:321159:324031:-1 gene:EMLSAG00000001730 transcript:EMLSAT00000001730 description:"maker-LSalAtl2s129-snap-gene-3.7") HSP 1 Score: 56.225 bits (134), Expect = 4.014e-8 Identity = 56/206 (27.18%), Postives = 89/206 (43.20%), Query Frame = 0 Query: 47 VLEGHDRGVNWASFHPSMPLIVSGADDRQIKLWRMNDSKAWEVDTCRGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTAKRTCLHTFRREHDRFWIVAAHPTLNLFAAGHDSGMVVFKLERERPAHALHGNLLYYVKDKYLRKLDFTTQKDKAV----------LQLRGGSRSLVYSMSYNPAENAVVLVTRSSNLENSVYDLYT 242 VL+GHD V S IVSG+DD +K+W K + T GH V S R ++IVS S D+S++VW+ TC+HT + H + + DS + ++ +E H L G+L +Y +L + D V L G + VYS+ + + + +V+ S + V+D+ T Sbjct: 319 VLKGHDDHVI-TCLQFSNNRIVSGSDDNTLKVWSATTGKC--LRTLVGHTGGVWSXQM--RDNIIVSGSTDRSLKVWNADAGTCVHTLYGHTSTVRCMHLHEN-QVVSGSRDSTLRIWDIETGECLHILAGHLAAVRCVQYDGRLVVSGAYDYMVKVWNPEREECLHTLSGHTNRVYSLQF----DGIHVVSGSLDTSIRVWDVET 514
BLAST of coatomer subunit alpha isoform 11 vs. L. salmonis genes
Match: EMLSAG00000004113 (supercontig:LSalAtl2s:LSalAtl2s217:732115:733862:-1 gene:EMLSAG00000004113 transcript:EMLSAT00000004113 description:"maker-LSalAtl2s217-augustus-gene-7.26") HSP 1 Score: 55.4546 bits (132), Expect = 6.326e-8 Identity = 36/133 (27.07%), Postives = 59/133 (44.36%), Query Frame = 0 Query: 47 VLEGHDRGVNWASFHPSMPLIVSGADDRQIKLWRMNDSKAWEVDTCRGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTAKRTCLHTFRREHDRFWIVAAHPTLN-LFAAGHDSGMVVFKLERERPAHALHGN 178 V+ GH V +F P +GA DR IK+W + K + GH + V + RQ + S ED+ ++ WD + + + +A HPT++ L + G DS V+ + + H L G+ Sbjct: 191 VVSGHIGWVRCVAFEPGNEWFCTGAADRVIKIWDLASGKL--KLSLTGHVSTVRGLAVSARQPYLFSCGEDRQVKXWDLEYNKVIRHYHGHLSAVYDLALHPTIDVLVSCGRDSTARVWDMRTKVNIHTLTGH 321 HSP 2 Score: 53.1434 bits (126), Expect = 3.478e-7 Identity = 33/136 (24.26%), Postives = 59/136 (43.38%), Query Frame = 0 Query: 43 VVKHVLEGHDRGVNWASFHPSMPLIVSGADDRQIKLWRMNDSKAWEVDTCRGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTAKRTCLHTFRREHDRFWIVAAHPTLNLFAAGHDSGMVVFKLERERPAHALHGN 178 V++H GH V + HP++ ++VS D ++W M + T GH + V +V I++ S D +IR+WD A + V HPTL++ A+ + +++ + L G+ Sbjct: 272 VIRH-YHGHLSAVYDLALHPTIDVLVSCGRDSTARVWDMRTKV--NIHTLTGHTSTVGTVACQATDPQIITGSNDSTIRLWDLAAXKSMAXLXNHKKSVRAVVMHPTLDMMASASPDNIKEWRMPEGKFIQNLSGH 404
BLAST of coatomer subunit alpha isoform 11 vs. L. salmonis genes
Match: EMLSAG00000007279 (supercontig:LSalAtl2s:LSalAtl2s409:120750:123834:-1 gene:EMLSAG00000007279 transcript:EMLSAT00000007279 description:"augustus_masked-LSalAtl2s409-processed-gene-1.3") HSP 1 Score: 55.4546 bits (132), Expect = 6.785e-8 Identity = 36/128 (28.12%), Postives = 63/128 (49.22%), Query Frame = 0 Query: 43 VVKHVLEGHDRG-VNWASFHPSMPLIVSGADDRQIKLWRMNDSKAWEVDTCRGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTAKRTCLHTFRREHDRF----WIVAAHPTLNLFA-AGHDSGMVVF 164 V+K +G+D G + + HP++P+ V+ DDR I+ + K + H V+S+ ++S S D+S+R+W+ +TC+ +F + VA HP+ + A AG D+ VF Sbjct: 586 VIKLDTQGNDVGAITRVACHPTLPMTVTAHDDRHIRFFDNYTGKL--THSMVAHLEAVTSIAIDANGLYLISGSHDRSVRLWNIETKTCVQEITAHRKKFDESIFDVAFHPSSSYIASAGADALAKVF 711
BLAST of coatomer subunit alpha isoform 11 vs. L. salmonis genes
Match: EMLSAG00000003862 (supercontig:LSalAtl2s:LSalAtl2s209:625539:633615:-1 gene:EMLSAG00000003862 transcript:EMLSAT00000003862 description:"maker-LSalAtl2s209-snap-gene-5.15") HSP 1 Score: 55.0694 bits (131), Expect = 9.946e-8 Identity = 31/115 (26.96%), Postives = 46/115 (40.00%), Query Frame = 0 Query: 50 GHDRGVNWASFHPSMPLIVSGADDRQIKLWRMNDSKAWEVDTCRGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTAKRTCLHTFRREHDRFWIVAAHPTLNLFAAGHDSGMVVF 164 GH V F P S D+ + LW + + GH+++V + FHP + I S S D+S+RVWD C+ +A P A+G V+F Sbjct: 433 GHMYAVWHVKFSPQGYYFASAGHDKTVMLWSTEQHHSLRI--FAGHFSDVDCIAFHPNCNYIASGSSDRSVRVWDCVSGNCVRLMTGHKTAVSTLAFSPDGRFLASGGRDSRVLF 545 HSP 2 Score: 52.373 bits (124), Expect = 5.731e-7 Identity = 35/115 (30.43%), Postives = 48/115 (41.74%), Query Frame = 0 Query: 43 VVKHVLEGHDRGVNWASFHPSMPLIVSGADDRQIKLWRMNDSKAWEVDTC-RGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTAKRTCLHTFRREHDRFWIVAAHPTLNLFAAG 156 VV L GH V SF P +++S ++D I+LW C RGH V V F P+ S DK++ +W T + L F +A HP N A+G Sbjct: 392 VVSRTLYGHSGPVYGISFSPDKSMLLSCSEDGTIRLW-----------ICYRGHMYAVWHVKFSPQGYYFASAGHDKTVMLWSTEQHHSLRIFAGHFSDVDCIAFHPNCNYIASG 495
BLAST of coatomer subunit alpha isoform 11 vs. SwissProt
Match: gi|205371746|sp|P53621.2|COPA_HUMAN (RecName: Full=Coatomer subunit alpha; AltName: Full=Alpha-coat protein; Short=Alpha-COP; AltName: Full=HEP-COP; Short=HEPCOP; Contains: RecName: Full=Xenin; AltName: Full=Xenopsin-related peptide; Contains: RecName: Full=Proxenin) HSP 1 Score: 1566.21 bits (4054), Expect = 0.000e+0 Identity = 749/1077 (69.55%), Postives = 879/1077 (81.62%), Query Frame = 0 Query: 9 VFSLRKKNVSPGLSAMDDHMKSGTGTDLFGQADCVVKHVLEGHDRGVNWASFHPSMPLIVSGADDRQIKLWRMNDSKAWEVDTCRGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTAKRTCLHTFRREHDRFWIVAAHPTLNLFAAGHDSGMVVFKLERERPAHALHGNLLYYVKDKYLRKLDFTTQKDKAVLQLRGGSRSLVYSMSYNPAENAVVLVTRSSNLENSVYDLYTIPKDSDGQTPDAPEGKRSSGVTAIWVARNRIAVLDRSHTLIIKNMKNEVTKKVQTPNCDEIFYAGTGMLLLRDNDSVTLFDVQQKRNLGNVKIPKCRYVIWSPDMTTVALLSKHNITICNRKLQSLCSIHENTRVKSGTWDDTGVFIYTTSNHIKYAITNGDHGIIRTLNLPVYLTRIKGDKVFLLDRECKPCTMTIDTTEYRFKLALINRKYDEVLHMVRNAKLVGQSIIGYLQKKGYPEVALHFVKDEKTRFALALECMDIEVALEAAKALDDKDCWDKLSESALMLGNHQVVEMCYQRTKNFDKLSFLYLITGNLEKLRKMMKIAEIRKDHSGHFQNALYLGDVPERVKILKNCGQTSLAYLTAKTHGMDEEAEDIKSGVDPDT-PLPEPTGNGVPIVPPQPKSQMEENWPLLTVSKGFFEGIRAVRSGGGAKAAGGTGALAMEDTDMDEGAGAGWGDD---DLGLDGDEEAVGGEDDFKSADGEEGPGEGDGGWDVDDGDLELPAELDGGTGSNVNTGATGDEDEGYFAPPTKGQSPAQNWASNSALPVDHIVAGSFESACRLLHDQVGVVNFEPYKSFFMTDFARGRTSFVALPALPALHGYPQSNWKEAGPKNGLPAVGLKLNHLVQRLQTCYQLTTAGKFSDAITKFRNILLSIPLLVVETKQDEAEAVQLREICMNYLVGLTMETKRKEMPKSSLEEQIRVCEMAAYFSHCHLQPVHQILTLRTACNLFFKLKNFKTAGSFARRLLELGPKPEVAQQTRKILQACDKNPTDEHKLAYDEFNPFDIDAVEYSPIYRGAEKVECPFCSAKYSPQAANTVCAVCTVGQVAKSTQGLKI 1081 + LRKKN+SPG A++ ++ TG DLFG D VVKHVLEGHDRGVNWA+FHP+MPLIVSGADDRQ+K+WRMN+SKAWEVDTCRGHYNNVS +FHPRQ+LI+SNSEDKSIRVWD +KRT + TFRR+HDRFW++AAHP LNLFAAGHD GM+VFKLERERPA+A+HGN+L+YVKD++LR+LDF + KD AV+QLR GS+ V++MSYNPAENAV+L TR+SNLENS YDLYTIPKD+D Q PDAPEGKRSSG+TA+WVARNR AVLDR H+L+IKN+KNE+TKKVQ PNCDEIFYAGTG LLLRD DS+TLFDVQQKR L +VKI K +YVIWS DM+ VALL+KH I ICNRKL +LC+IHEN RVKSG WD++GVFIYTTSNHIKYA+T GDHGIIRTL+LP+Y+TR+KG+ V+ LDREC+P +TID TE++FKLALINRKYDEVLHMVRNAKLVGQSII YLQKKGYPEVALHFVKDEKTRF+LALEC +IE+ALEAAKALDDK+CW+KL E AL+ GNHQ+VEMCYQRTKNFDKLSFLYLITGNLEKLRKMMKIAEIRKD SGH+QNALYLGDV ERV+ILKNCGQ SLAYLTA THG+DEEAE +K DP+ +P+ N + PP P ++ NWPLLTVSKGFFEG A + GGA AA D D+D GWG+D L DG EA G D G+E EG GGWDV++ DLELP ELD ++ GA G ++G+F PPTKG SP Q W +NS LPVDHI+AGSFE+A RLLHDQVGV+ F PYK F+ +ARGRT++ ALP LP+++GYP NWK+AG KNG+PAVGLKLN L+QRLQ CYQLTT GKF +A+ KFR+ILLS+PLLVV+ KQ+ AEA QL IC Y+VGL++ET+RK++PK +LE+Q R+CEMAAYF+H +LQPVH IL LRTA NLFFKLKNFKTA +FARRLLELGPKPEVAQQTRKIL AC+KNPTD ++L YD NPFDI A Y PIYRG +CP A YSP+ +C V TV ++ K GL+I Sbjct: 164 ISGLRKKNLSPG--AVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAHPNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLHYVKDRFLRQLDFNSSKDVAVMQLRSGSKFPVFNMSYNPAENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVWVARNRFAVLDRMHSLLIKNLKNEITKKVQVPNCDEIFYAGTGNLLLRDADSITLFDVQQKRTLASVKISKVKYVIWSADMSHVALLAKHAIVICNRKLDALCNIHENIRVKSGAWDESGVFIYTTSNHIKYAVTTGDHGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLTIDPTEFKFKLALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEIALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDKLSFLYLITGNLEKLRKMMKIAEIRKDMSGHYQNALYLGDVSERVRILKNCGQKSLAYLTAATHGLDEEAESLKETFDPEKETIPDIDPNAKLLQPPAPIMPLDTNWPLLTVSKGFFEGTIASKGKGGALAA---------DIDIDTVGTEGWGEDAELQLDEDGFVEATEGLGDDALGKGQE---EG-GGWDVEE-DLELPPELD------ISPGAAGGAEDGFFVPPTKGTSPTQIWCNNSQLPVDHILAGSFETAMRLLHDQVGVIQFGPYKQLFLQTYARGRTTYQALPCLPSMYGYPNRNWKDAGLKNGVPAVGLKLNDLIQRLQLCYQLTTVGKFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLITICREYIVGLSVETERKKLPKETLEQQKRICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFKTAATFARRLLELGPKPEVAQQTRKILSACEKNPTDAYQLNYDMHNPFDICAASYRPIYRGKPVEKCPLSGACYSPEFKGQICRVTTVTEIGKDVIGLRI 1218 HSP 2 Score: 67.781 bits (164), Expect = 4.249e-10 Identity = 36/115 (31.30%), Postives = 54/115 (46.96%), Query Frame = 0 Query: 42 CVVKHVLEGHDRGVNWASFHPSMPLIVSGADDRQIKLWRMNDSKAWEVDTCRGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTAKRTCLHTFRREHDRFWIVAAHPTLNLFAAG 156 C + + HD V FH PL VSG DD +IK+W + + T GH + + + FH I+S S+D++IRVW+ RTC+ + HPT +L + Sbjct: 41 CTLIDKFDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRC--LFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPTEDLVVSA 153 HSP 3 Score: 60.4622 bits (145), Expect = 8.345e-8 Identity = 31/83 (37.35%), Postives = 45/83 (54.22%), Query Frame = 0 Query: 48 LEGHDRGVNWASFHPSMPLIVSGADDRQIKLWRMNDSKAWEVDTC----RGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTA 126 L GH + FH P I+S +DD+ I++W W+ TC GH + V FHP +DL+VS S D+++RVWD + Sbjct: 89 LLGHLDYIRTTFFHHEYPWILSASDDQTIRVWN------WQSRTCVCVLTGHNHYVMCAQFHPTEDLVVSASLDQTVRVWDIS 165
BLAST of coatomer subunit alpha isoform 11 vs. SwissProt
Match: gi|2494888|sp|Q27954.1|COPA_BOVIN (RecName: Full=Coatomer subunit alpha; AltName: Full=Alpha-coat protein; Short=Alpha-COP; AltName: Full=HEP-COP; Short=HEPCOP; Contains: RecName: Full=Xenin; AltName: Full=Xenopsin-related peptide; Contains: RecName: Full=Proxenin) HSP 1 Score: 1561.58 bits (4042), Expect = 0.000e+0 Identity = 748/1077 (69.45%), Postives = 878/1077 (81.52%), Query Frame = 0 Query: 9 VFSLRKKNVSPGLSAMDDHMKSGTGTDLFGQADCVVKHVLEGHDRGVNWASFHPSMPLIVSGADDRQIKLWRMNDSKAWEVDTCRGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTAKRTCLHTFRREHDRFWIVAAHPTLNLFAAGHDSGMVVFKLERERPAHALHGNLLYYVKDKYLRKLDFTTQKDKAVLQLRGGSRSLVYSMSYNPAENAVVLVTRSSNLENSVYDLYTIPKDSDGQTPDAPEGKRSSGVTAIWVARNRIAVLDRSHTLIIKNMKNEVTKKVQTPNCDEIFYAGTGMLLLRDNDSVTLFDVQQKRNLGNVKIPKCRYVIWSPDMTTVALLSKHNITICNRKLQSLCSIHENTRVKSGTWDDTGVFIYTTSNHIKYAITNGDHGIIRTLNLPVYLTRIKGDKVFLLDRECKPCTMTIDTTEYRFKLALINRKYDEVLHMVRNAKLVGQSIIGYLQKKGYPEVALHFVKDEKTRFALALECMDIEVALEAAKALDDKDCWDKLSESALMLGNHQVVEMCYQRTKNFDKLSFLYLITGNLEKLRKMMKIAEIRKDHSGHFQNALYLGDVPERVKILKNCGQTSLAYLTAKTHGMDEEAEDIKSGVDPDT-PLPEPTGNGVPIVPPQPKSQMEENWPLLTVSKGFFEGIRAVRSGGGAKAAGGTGALAMEDTDMDEGAGAGWGDD---DLGLDGDEEAVGGEDDFKSADGEEGPGEGDGGWDVDDGDLELPAELDGGTGSNVNTGATGDEDEGYFAPPTKGQSPAQNWASNSALPVDHIVAGSFESACRLLHDQVGVVNFEPYKSFFMTDFARGRTSFVALPALPALHGYPQSNWKEAGPKNGLPAVGLKLNHLVQRLQTCYQLTTAGKFSDAITKFRNILLSIPLLVVETKQDEAEAVQLREICMNYLVGLTMETKRKEMPKSSLEEQIRVCEMAAYFSHCHLQPVHQILTLRTACNLFFKLKNFKTAGSFARRLLELGPKPEVAQQTRKILQACDKNPTDEHKLAYDEFNPFDIDAVEYSPIYRGAEKVECPFCSAKYSPQAANTVCAVCTVGQVAKSTQGLKI 1081 + LRKKN+SPG A++ ++ TG DLFG D VVKHVLEGHDRGVNWA+FHP+MPLIVSGADDRQ+K+WRMN+SKAWEVDTCRGHYNNVS +FHPRQ+LI+SNSEDKSIRVWD +KRT + TFRR+HDRFW++AAHP LNLFAAGHD GM+VFKLERERPA+A+HGN+L+YVKD++LR+LDF + KD AV+QLR GS+ V+SMSYNPAENAV+L TR+SNLENS YDLYTIPKD+D Q PDAPEGKRSSG+TA+WVARNR AVLDR H+L+IKN+KNE+TKKVQ PNCDEIFYAGTG LLLRD +S+TLFDVQQKR L +VKI K +YVIWS DM+ VALL+KH I ICNRKL++LC+IHEN RVKSG WD++GVFIYTTSNHIKYA+T GD+GIIRTL+LP+Y+TR+KG+ V+ LDREC+P +TID TE++FKLALINRKYDEVLHMVRNAKLVGQSII YLQKKGYPEVALHFVKDEKTRF+LALEC +IE+ALEAAKALDDK+CW+KL E AL+ GNHQ+VEMCYQRTKNFDKLSFLYLITGNLEKLRKMMKIAEIRKD SGH+QNALYLGDV ERV+ILKNCGQ SLAYLTA THG+DEEAE +K DP+ +P+ N + PP P ++ NWPLLTVSKGFFEG A + GGA AA D D+D GWG+D L DG EA G D G+E EG GGWDV++ DLELP ELD + GA G ++G+F PPTKG SP Q W +NS LPVDHI+AGSFE+A RLLHDQVGV F PYK F+ +ARGRT++ ALP LP+++GYP NWK+AG KNG+PAVGLKLN L+QRLQ CYQLTT GKF +A+ KFR+ILLS+PLLVV+ KQ+ AEA QL IC Y+VGL+MET+RK++PK +LE+Q R+CEMAAYF+H +LQPVH IL LRTA NLFFKLKNF+TA +FARRLLELGPKPEVAQQTRKIL AC+KNPTD ++L YD NPFDI A Y PIYRG +CP A YSP+ +C V TV ++ K GL+I Sbjct: 164 ISGLRKKNLSPG--AVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAHPNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLHYVKDRFLRQLDFNSSKDVAVMQLRSGSKFPVFSMSYNPAENAVLLCTRASNLENSTYDLYTIPKDADTQNPDAPEGKRSSGLTAVWVARNRFAVLDRMHSLLIKNLKNEITKKVQVPNCDEIFYAGTGNLLLRDAESITLFDVQQKRTLASVKISKVKYVIWSADMSHVALLAKHAIVICNRKLEALCNIHENIRVKSGAWDESGVFIYTTSNHIKYAVTTGDYGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLTIDPTEFKFKLALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEIALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDKLSFLYLITGNLEKLRKMMKIAEIRKDMSGHYQNALYLGDVSERVRILKNCGQKSLAYLTAATHGLDEEAESLKETFDPEKETIPDIDPNAKLLQPPAPIMPLDTNWPLLTVSKGFFEGSIASKGKGGALAA---------DIDIDTVGTEGWGEDAELQLDEDGFVEATEGLGDDALGKGQE---EG-GGWDVEE-DLELPPELD------IPPGAAGGAEDGFFVPPTKGTSPTQIWCNNSQLPVDHILAGSFETAMRLLHDQVGVTQFGPYKQLFLQTYARGRTTYQALPCLPSMYGYPNRNWKDAGLKNGVPAVGLKLNDLIQRLQLCYQLTTVGKFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLITICREYIVGLSMETERKKLPKETLEQQKRICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFRTAAAFARRLLELGPKPEVAQQTRKILSACEKNPTDAYQLNYDMHNPFDICAASYRPIYRGKPVEKCPLSGACYSPEFKGQICKVTTVTEIGKDVIGLRI 1218 HSP 2 Score: 66.6254 bits (161), Expect = 1.061e-9 Identity = 35/115 (30.43%), Postives = 54/115 (46.96%), Query Frame = 0 Query: 42 CVVKHVLEGHDRGVNWASFHPSMPLIVSGADDRQIKLWRMNDSKAWEVDTCRGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTAKRTCLHTFRREHDRFWIVAAHPTLNLFAAG 156 C + + HD V FH PL VSG DD +IK+W + + T GH + + + FH I+S S+D++IRVW+ RTC+ + HP+ +L + Sbjct: 41 CTLIDKFDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRC--LFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSA 153 HSP 3 Score: 60.4622 bits (145), Expect = 7.799e-8 Identity = 31/83 (37.35%), Postives = 45/83 (54.22%), Query Frame = 0 Query: 48 LEGHDRGVNWASFHPSMPLIVSGADDRQIKLWRMNDSKAWEVDTC----RGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTA 126 L GH + FH P I+S +DD+ I++W W+ TC GH + V FHP +DL+VS S D+++RVWD + Sbjct: 89 LLGHLDYIRTTFFHHEYPWILSASDDQTIRVWN------WQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDIS 165
BLAST of coatomer subunit alpha isoform 11 vs. SwissProt
Match: gi|341940380|sp|Q8CIE6.2|COPA_MOUSE (RecName: Full=Coatomer subunit alpha; AltName: Full=Alpha-coat protein; Short=Alpha-COP; Contains: RecName: Full=Xenin; AltName: Full=Xenopsin-related peptide; Contains: RecName: Full=Proxenin) HSP 1 Score: 1555.81 bits (4027), Expect = 0.000e+0 Identity = 744/1078 (69.02%), Postives = 875/1078 (81.17%), Query Frame = 0 Query: 9 VFSLRKKNVSPGLSAMDDHMKSGTGTDLFGQADCVVKHVLEGHDRGVNWASFHPSMPLIVSGADDRQIKLWRMNDSKAWEVDTCRGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTAKRTCLHTFRREHDRFWIVAAHPTLNLFAAGHDSGMVVFKLERERPAHALHGNLLYYVKDKYLRKLDFTTQKDKAVLQLRGGSRSLVYSMSYNPAENAVVLVTRSSNLENSVYDLYTIPKDSDGQTPDAPEGKRSSGVTAIWVARNRIAVLDRSHTLIIKNMKNEVTKKVQTPNCDEIFYAGTGMLLLRDNDSVTLFDVQQKRNLGNVKIPKCRYVIWSPDMTTVALLSKHNITICNRKLQSLCSIHENTRVKSGTWDDTGVFIYTTSNHIKYAITNGDHGIIRTLNLPVYLTRIKGDKVFLLDRECKPCTMTIDTTEYRFKLALINRKYDEVLHMVRNAKLVGQSIIGYLQKKGYPEVALHFVKDEKTRFALALECMDIEVALEAAKALDDKDCWDKLSESALMLGNHQVVEMCYQRTKNFDKLSFLYLITGNLEKLRKMMKIAEIRKDHSGHFQNALYLGDVPERVKILKNCGQTSLAYLTAKTHGMDEEAEDIKSGVDPDT-PLPEPTGNGVPIVPPQPKSQMEENWPLLTVSKGFFEGIRAVRSGGGAKAAGGTGALAMEDTDMDEGAGAGWGDD-DLGLDGD---EEAVGGEDDFKSADGEEGPGEGDGGWDVDDGDLELPAELDGGTGSNVNTGATGDEDEGYFAPPTKGQSPAQNWASNSALPVDHIVAGSFESACRLLHDQVGVVNFEPYKSFFMTDFARGRTSFVALPALPALHGYPQSNWKEAGPKNGLPAVGLKLNHLVQRLQTCYQLTTAGKFSDAITKFRNILLSIPLLVVETKQDEAEAVQLREICMNYLVGLTMETKRKEMPKSSLEEQIRVCEMAAYFSHCHLQPVHQILTLRTACNLFFKLKNFKTAGSFARRLLELGPKPEVAQQTRKILQACDKNPTDEHKLAYDEFNPFDIDAVEYSPIYRGAEKVECPFCSAKYSPQAANTVCAVCTVGQVAKSTQGLKI 1081 + LRKKN+SPG A++ ++ TG DLFG D VVKHVLEGHDRGVNWA+FHP+MPLIVSGADDRQ+K+WRMN+SKAWEVDTCRGHYNNVS +FHPRQ+LI+SNSEDKSIRVWD +KRT + TFRR+HDRFW++AAHP LNLFAAGHD GM+VFKLERERPA+A+HGN+L+YVKD++LR+LDF + KD AV+QLR GS+ V++MSYNPAENAV+L TR+SNLENS YDLYTIPKD+D Q PDAPEGKRSSG+TA+WVARNR AVLDR H+L+IKN+KNE+TKK+Q PNCDEIFYAGTG LLLRD DS+TLFDVQQKR L +VKI K +YVIWS DM+ VALL+KH I ICNRKL +LC+IHEN RVKSG WD++GVFIYTTSNHIKYA+T GDHGIIRTL+LP+Y+TR+KG+ V+ LDREC+P +TID TE++FKLALINRKYDEVLHMVRNAKLVGQSII YLQKKGYPEVALHFVKDEKTRF+LALEC +IE+ALEAAKALDDK+CW+KL E AL+ GNHQ+VEMCYQRTKNFDKLSFLYLITGNLEKLRKMMKIAEIRKD SGH+QNALYLGDV ERV+ILKNCGQ SLAYL+A THG+DEEAE +K DP+ +P+ N + PP P ++ NWPLLTVSKGFFEG A + GGA AA D D+D GWG+D +L LD D E G +D EEG GGWDV++ DLELP ELD V +G +G ++G+F PPTKG SP Q W +NS LPVDHI+AGSFE+A RLLHDQVGV+ F PYK F+ +ARGRT++ ALP LP+++ YP NWK+AG KNG+PAVGLKLN L+QRLQ CYQLTT GKF +A+ KFR+ILLS+PLLVV+ KQ+ AEA QL IC Y+VGL ME +RK++PK +L++Q R+CEMAAYF+H +LQPVH IL LRTA NLFFKLKNFKTA +FARRLLELGPKPEVAQQTRKIL AC+KNPTD +L YD NPFDI A Y PIYRG +CP A YSP+ +C V TV ++ K GL+I Sbjct: 164 ISGLRKKNLSPG--AVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAHPNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLHYVKDRFLRQLDFNSSKDVAVMQLRSGSKFPVFNMSYNPAENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVWVARNRFAVLDRMHSLLIKNLKNEITKKIQVPNCDEIFYAGTGNLLLRDADSITLFDVQQKRTLASVKISKVKYVIWSADMSHVALLAKHAIVICNRKLDALCNIHENIRVKSGAWDESGVFIYTTSNHIKYAVTTGDHGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLTIDPTEFKFKLALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEIALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDKLSFLYLITGNLEKLRKMMKIAEIRKDMSGHYQNALYLGDVSERVRILKNCGQKSLAYLSAATHGLDEEAESLKETFDPEKETIPDIDPNAKLLQPPAPIMPLDTNWPLLTVSKGFFEGSIASKGKGGALAA---------DIDIDTVGTEGWGEDAELQLDEDGFVEAPEGLGEDVLGKGQEEG-----GGWDVEE-DLELPPELD------VPSGVSGSAEDGFFVPPTKGTSPTQIWCNNSQLPVDHILAGSFETAMRLLHDQVGVIQFGPYKQLFLQTYARGRTTYQALPCLPSMYSYPNRNWKDAGLKNGVPAVGLKLNDLIQRLQLCYQLTTVGKFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLITICREYIVGLCMEIERKKLPKETLDQQKRICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFKTAATFARRLLELGPKPEVAQQTRKILSACEKNPTDACQLNYDMHNPFDICAASYRPIYRGKPVEKCPLSGACYSPEFKGQICRVTTVTEIGKDVIGLRI 1218 HSP 2 Score: 66.6254 bits (161), Expect = 1.026e-9 Identity = 35/115 (30.43%), Postives = 54/115 (46.96%), Query Frame = 0 Query: 42 CVVKHVLEGHDRGVNWASFHPSMPLIVSGADDRQIKLWRMNDSKAWEVDTCRGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTAKRTCLHTFRREHDRFWIVAAHPTLNLFAAG 156 C + + HD V FH PL VSG DD +IK+W + + T GH + + + FH I+S S+D++IRVW+ RTC+ + HP+ +L + Sbjct: 41 CTLIDKFDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRC--LFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSA 153 HSP 3 Score: 60.4622 bits (145), Expect = 7.603e-8 Identity = 31/83 (37.35%), Postives = 45/83 (54.22%), Query Frame = 0 Query: 48 LEGHDRGVNWASFHPSMPLIVSGADDRQIKLWRMNDSKAWEVDTC----RGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTA 126 L GH + FH P I+S +DD+ I++W W+ TC GH + V FHP +DL+VS S D+++RVWD + Sbjct: 89 LLGHLDYIRTTFFHHEYPWILSASDDQTIRVWN------WQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDIS 165
BLAST of coatomer subunit alpha isoform 11 vs. SwissProt
Match: gi|146286088|sp|Q94A40.2|COPA1_ARATH (RecName: Full=Coatomer subunit alpha-1; AltName: Full=Alpha-coat protein 1; Short=Alpha-COP 1) HSP 1 Score: 1006.9 bits (2602), Expect = 0.000e+0 Identity = 528/1080 (48.89%), Postives = 722/1080 (66.85%), Query Frame = 0 Query: 11 SLRKKNVSPGLSAMDDHMK-SGTGTDLFGQADCVVKHVLEGHDRGVNWASFHPSMPLIVSGADDRQIKLWRMNDSKAWEVDTCRGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTAKRTCLHTFRREHDRFWIVAAHPTLNLFAAGHDSGMVVFKLERERPAHALHGNLLYYVKDKYLRKLDFTTQKDKAVLQLR-GGSRSLVYS---MSYNPAENAVVLVTRSSNLENSVYDLYTIPKDSDGQTPDAPEGKRSSGVTAIWVARNRIAVLDRSHT-LIIKNMKNEVTKKVQTP-NCDEIFYAGTGMLLLRDNDSVTLFDVQQKRNLGNVKIPKCRYVIWSPDMTTVALLSKHNITICNRKLQSLCSIHENTRVKSGTWDDTGVFIYTTSNHIKYAITNGDHGIIRTLNLPVYLTRIKGDKVFLLDRECKPCTMTIDTTEYRFKLALINRKYDEVLHMVRNAKLVGQSIIGYLQKKGYPEVALHFVKDEKTRFALALECMDIEVALEAAKALDDKDCWDKLSESALMLGNHQVVEMCYQRTKNFDKLSFLYLITGNLEKLRKMMKIAEIRKDHSGHFQNALYLGDVPERVKILKNCGQTSLAYLTAKTHGMDEEAEDIKSGVDPDTP-LPEPTGNGVPIVPPQPKSQMEENWPLLTVSKGFFEGIRAVRSGGGAKAAGGTGALAMEDTDMDEGAGAGWGDD-DLGLDGDEEAVGGEDDFKSADGEEGPGEGDGGWDVDDGDLELPAELDGGTGSNVNTGATGDEDEGYFAPPTKGQSPAQNWASNSALPVDHIVAGSFESACRLLHDQVGVVNFEPYKSFFMTDFARGRTSFVALPALPALHGYPQSNWKEAGPKN--GLPAVGLKLNHLVQRLQTCYQLTTAGKFSDAITKFRNILLSIPLLVVETKQDEAEAVQLREICMNYLVGLTMETKRKEMPKSSLEEQIRVCEMAAYFSHCHLQPVHQILTLRTACNLFFKLKNFKTAGSFARRLLELGPKPEVAQQTRKILQACDKNPTDEHKLAYDEFNPFDIDAVEYSPIYRGAEKVECPFCSAKYSPQAANTVCAVCTVGQVAKSTQGL 1079 +LRKK VSP DD M+ + +DLFG D +VK+VLEGHDRGVNWA+FHP++PLIVSGADDRQ+KLWRMN++KAWEVDT RGH NNVSSV+FH +QD+IVSNSEDKSIRVWD KRT L TFRREHDRFWI+A HP +NL AAGHDSGM+VFKLERERPA AL G+ L+Y KD++LR +++TQ+D V+ +R G+ SL S +SY+P ENAV++ S+L+ Y+LY IPKDS G++ + KR +G +A+++ARNR AVL++S + +++KN+KNEV KK P D IFYAGTG LL R D V +FD+QQ+ LG ++ P RYV+WS DM +VALLSKH I I ++KL C++HE RVKSG WDD GVFIYTT NHIKY + NGD GIIRTL++P+Y+T++ G+ +F LDR+ K +TI+ TEY FKL+L+ ++YD V+ M++N++L GQ++I YLQ+KG+PEVALHFV+DE+ RF LALE +I VA+ +A +++KD W +L AL GN +VE YQ+TKNF++LSFLYLITGNL+KL K+MKIAE++ + G F NALYLGDV ERVKIL+N G LAY+TA HG+++ AE + + + + P LPE + ++PP P +WPLL V KG FE GG ++A G + ED + D WG++ D+ +DG E ED +A+ E + +GGW ++ DL LP ELD A+ + F P +G +Q+W+ S+L + AGSF++A RLLH Q+G+ NF P KS F+ F + A + P + + W E+ N PA+ + L ++L++ Y+ TT GKF++A+ F +IL +IPL+VVET+++ E +L I Y++GL ME KR+EM + +Q E+AAYF+HC+LQ H L L +A + +K KN TA +FARRLLE P A+ R+++QA ++N TDE KL YD NPF + Y PIYRG + V CP+C+A++ P +C VC + + GL Sbjct: 166 ALRKKTVSPA----DDIMRLTQMNSDLFGGVDAIVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDATKRTGLQTFRREHDRFWILAVHPEMNLLAAGHDSGMIVFKLERERPAFALSGDSLFYAKDRFLRYYEYSTQRDSQVIPIRRPGTPSLNQSPRTLSYSPTENAVLIC---SDLDGGSYELYIIPKDSVGRSDVVQDAKRGTGGSAVFIARNRFAVLEKSTSQVLVKNLKNEVVKKSPLPIPTDAIFYAGTGNLLCRSEDKVVIFDLQQRLVLGELQTPFVRYVVWSSDMESVALLSKHTIIIASKKLVLQCTLHETIRVKSGAWDDNGVFIYTTLNHIKYCLPNGDSGIIRTLDVPIYITKVSGNTIFCLDRDGKNKAITINATEYIFKLSLLRKRYDHVMSMIKNSQLCGQAMIAYLQQKGFPEVALHFVEDERIRFNLALESGNISVAVASATQINEKDHWYRLGVEALRQGNSGIVEFAYQQTKNFERLSFLYLITGNLDKLSKLMKIAEVKNNVMGQFHNALYLGDVKERVKILENAGHLPLAYITASVHGLNDIAERLATELGDNVPSLPEGKTPSL-LMPPTP-IMCGGDWPLLRVMKGIFE--------GGLESADRGGTVDEEDVEGD------WGEELDINVDGMENR-DIEDILAAAEAGEEENDEEGGWGLE--DLVLPPELD-------TPKASANARSSVFVTPPQGMPVSQSWSQKSSLAAEQAAAGSFDTAMRLLHRQLGIKNFTPLKSMFLDLFNGSHSYLRAFSSCPVVPLAIERGWSESSSPNVRSPPALVYDFSQLDEKLKSGYKATTTGKFTEALRLFLSILHTIPLVVVETRREVDEVKELIVIVKEYVLGLQMELKRREMKDDPVRQQ----ELAAYFTHCNLQTPHLRLALLSAMGVCYKAKNLATASNFARRLLETSPVDSQAKMARQVVQAAERNMTDETKLNYDFRNPFVVCGSTYVPIYRGQKDVSCPYCTARFVPNQEGNICTVCDLAVIGADASGL 1208 HSP 2 Score: 69.3218 bits (168), Expect = 1.338e-10 Identity = 38/108 (35.19%), Postives = 57/108 (52.78%), Query Frame = 0 Query: 49 EGHDRGVNWASFHPSMPLIVSGADDRQIKLWRMNDSKAWEVDTCRGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTAKRTCLHTFRREHDRFWIVAAHPTLNLFAAG 156 EG RGV+ FH S PL VSG DD +IK+W + + + T GH + + +V FH IVS S+D++IR+W+ RTC+ + + HP +L + Sbjct: 51 EGPVRGVH---FHNSQPLFVSGGDDYKIKVWNYKNHRC--LFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCVSVLTGHNHYVMCASFHPKEDLVVSA 153 HSP 3 Score: 63.5438 bits (153), Expect = 8.034e-9 Identity = 32/81 (39.51%), Postives = 45/81 (55.56%), Query Frame = 0 Query: 48 LEGHDRGVNWASFHPSMPLIVSGADDRQIKLWRMNDSKAWEVDTC----RGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWD 124 L GH + FH P IVS +DD+ I++W W+ TC GH + V FHP++DL+VS S D+++RVWD Sbjct: 89 LLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWN------WQSRTCVSVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWD 163
BLAST of coatomer subunit alpha isoform 11 vs. SwissProt
Match: gi|122234492|sp|Q0J3D9.1|COPA3_ORYSJ (RecName: Full=Coatomer subunit alpha-3; AltName: Full=Alpha-coat protein 3; Short=Alpha-COP 3) HSP 1 Score: 1001.5 bits (2588), Expect = 0.000e+0 Identity = 525/1082 (48.52%), Postives = 714/1082 (65.99%), Query Frame = 0 Query: 11 SLRKKNVSPGLSAMDDHMK-SGTGTDLFGQADCVVKHVLEGHDRGVNWASFHPSMPLIVSGADDRQIKLWRMNDSKAWEVDTCRGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTAKRTCLHTFRREHDRFWIVAAHPTLNLFAAGHDSGMVVFKLERERPAHALHGNLLYYVKDKYLRKLDFTTQKDKAVLQLRG-GSRSLVYS---MSYNPAENAVVLVTRSSNLENSVYDLYTIPKDSDGQTPDAPEGKRSSGVTAIWVARNRIAVLDRS-HTLIIKNMKNEVTKKVQTP-NCDEIFYAGTGMLLLRDNDSVTLFDVQQKRNLGNVKIPKCRYVIWSPDMTTVALLSKHNITICNRKLQSLCSIHENTRVKSGTWDDTGVFIYTTSNHIKYAITNGDHGIIRTLNLPVYLTRIKGDKVFLLDRECKPCTMTIDTTEYRFKLALINRKYDEVLHMVRNAKLVGQSIIGYLQKKGYPEVALHFVKDEKTRFALALECMDIEVALEAAKALDDKDCWDKLSESALMLGNHQVVEMCYQRTKNFDKLSFLYLITGNLEKLRKMMKIAEIRKDHSGHFQNALYLGDVPERVKILKNCGQTSLAYLTAKTHGMDEEAEDIKSGVDPDTP-LPEPTGNGVPIVPPQPKSQMEENWPLLTVSKGFFEGIRAVRSGGGAKAAGGTGALAMEDTDMDEGAGAGWGDDDLGL-DGDEEAVGGEDDFKSADGEEGPGEG-DGGWDVDDGDLELPAELDGGTGSNVNTGATGDEDEGYFAPPTKGQSPAQNWASNSALPVDHIVAGSFESACRLLHDQVGVVNFEPYKSFFMTDFARGRTSFV-ALPALPALHGYPQSNWKEAGPKN--GLPAVGLKLNHLVQRLQTCYQLTTAGKFSDAITKFRNILLSIPLLVVETKQDEAEAVQLREICMNYLVGLTMETKRKEMPKSSLEEQIRVCEMAAYFSHCHLQPVHQILTLRTACNLFFKLKNFKTAGSFARRLLELGPKPEVAQQTRKILQACDKNPTDEHKLAYDEFNPFDIDAVEYSPIYRGAEKVECPFCSAKYSPQAANTVCAVCTVGQVAKSTQGL 1079 +LRKK VSP DD ++ + TDLFG D VVK+VLEGHDRGVNWASFHP++PLIVSGADDRQ+KLWRMND+KAWEVDT RGH NNVS V+FH +QD+IVSNSEDKSIRVWD KRT + TFRREHDRFWI+AAHP +NL AAGHD+GM+VFKLERERPA ++ G+ ++YVKD++LR +++TQK+ + +R GS SL S +SY+P ENAV++ S+++ Y+LY +PKDS G+T E K+ +G +A++VARNR AVL++S + +++KN+KNE+ KK P D I+YAGTG LL + D VT+FD+QQ+ LG ++ P +YV+WS DM ++ALLSKH + I N+KL C++HE RVKSG WD+ GVFIYTT NHIKY + NGD GII+TL++P+Y+TR G+ +F LDR+ K +T+D +EY FKLAL+ ++YD V+ M++N++L GQ++I YLQ+KG+PEVALHFVKDEKTRF LALE +I++A+ +AK +DDKD W +L AL GN +VE YQRTKNF++L+FLYLITG ++K+ M KIA + G F NALYLGD +RV+IL+N GQ LAY+TA THG+ E A+ + + + + P LPE + ++PP P + +WPLL V +G FEG TG +E+ DE AGA WGD+DL + D E G D F + +GE +G +GGWD++ DLELP E + T N G+ F P G +Q W S+L +H AG+F++A RLL Q+G+ NF P K F+ D G S++ AL P + + W E+ N G PA+ + + RL+ Y+ TT GKF +A+ +F NIL +IPL+VV+++++ E +L EI Y++GL ME KRKE+ +Q E+AAYF++C LQ VH L L +A L +K KNF TA FAR LLE P A++ R++ Q C D +L YD NPF + Y PIYRG + V CP+C +++ P +C +C + V GL Sbjct: 166 ALRKKTVSPA----DDILRLTQMNTDLFGGVDAVVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNDTKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDATKRTGIQTFRREHDRFWILAAHPEMNLLAAGHDNGMIVFKLERERPAFSVSGDTVFYVKDRFLRFFEYSTQKEVQLAPIRRPGSVSLNQSPRTLSYSPTENAVLIC---SDVDGGSYELYIVPKDSAGRTDYLQEAKKGAGGSAVFVARNRFAVLEKSSNQVLVKNLKNEIVKKSPLPIAMDAIYYAGTGNLLCKAEDRVTIFDLQQRLILGELQAPAVKYVVWSSDMESIALLSKHAVVIANKKLVHRCTLHETIRVKSGAWDENGVFIYTTLNHIKYCLPNGDSGIIKTLDVPIYITRAIGNNIFCLDRDGKNKLITVDASEYIFKLALLRKRYDHVMSMIKNSQLCGQAVISYLQQKGFPEVALHFVKDEKTRFNLALESGNIQIAVASAKEIDDKDHWYRLGIEALRQGNVGIVEYAYQRTKNFERLAFLYLITGYMDKVGFMCKIAGQNNNLMGQFHNALYLGDAMKRVEILENAGQLPLAYITAATHGLTEIADRLAAELGENIPSLPEGKTRSL-LIPPAPLTA-SGDWPLLRVMRGIFEG-----------GLDATGKAELEED--DEAAGADWGDEDLDMVDASEAMANGGDGFDAEEGEANEEDGEEGGWDLE--DLELPPEAE--TPKN-----AGNALSVVFVAPPPGMPVSQIWTQKSSLAGEHAAAGNFDTAMRLLSRQLGIKNFAPLKPLFL-DLHMGSHSYLRALATAPIIPVAVEKGWSESASPNVRGPPALVFTFSQMEDRLKAAYKATTEGKFPEALRQFLNILHTIPLIVVDSRREVDEVKELIEIVREYVLGLRMELKRKELRDDVNRQQ----ELAAYFTNCKLQRVHMRLVLGSAMGLCYKQKNFATAEHFARMLLENNPNESQAKRARQVQQQC-SGKKDSCELNYDYRNPFVVCGATYVPIYRGQKDVSCPYCGSRFVPSIEGQLCTICELAVVGADASGL 1210 HSP 2 Score: 68.9366 bits (167), Expect = 1.961e-10 Identity = 35/106 (33.02%), Postives = 53/106 (50.00%), Query Frame = 0 Query: 51 HDRGVNWASFHPSMPLIVSGADDRQIKLWRMNDSKAWEVDTCRGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTAKRTCLHTFRREHDRFWIVAAHPTLNLFAAG 156 HD V FH + PL VSG DD +IK+W + + T GH + + +V FH IVS S+D++IR+W+ RTC+ + + HP +L + Sbjct: 50 HDGPVRGVHFHATQPLFVSGGDDYKIKVWNYKTHRC--LFTLHGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCVAVLTGHNHYVMCASFHPKEDLVVSA 153 HSP 3 Score: 64.6994 bits (156), Expect = 3.685e-9 Identity = 32/81 (39.51%), Postives = 45/81 (55.56%), Query Frame = 0 Query: 48 LEGHDRGVNWASFHPSMPLIVSGADDRQIKLWRMNDSKAWEVDTC----RGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWD 124 L GH + FH P IVS +DD+ I++W W+ TC GH + V FHP++DL+VS S D+++RVWD Sbjct: 89 LHGHLDYIRTVQFHHEYPWIVSASDDQTIRIWN------WQSRTCVAVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWD 163
BLAST of coatomer subunit alpha isoform 11 vs. SwissProt
Match: gi|75333115|sp|Q9AUR8.1|COPA1_ORYSJ (RecName: Full=Coatomer subunit alpha-1; AltName: Full=Alpha-coat protein 1; Short=Alpha-COP 1) HSP 1 Score: 996.882 bits (2576), Expect = 0.000e+0 Identity = 523/1082 (48.34%), Postives = 711/1082 (65.71%), Query Frame = 0 Query: 11 SLRKKNVSPGLSAMDDHMK-SGTGTDLFGQADCVVKHVLEGHDRGVNWASFHPSMPLIVSGADDRQIKLWRMNDSKAWEVDTCRGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTAKRTCLHTFRREHDRFWIVAAHPTLNLFAAGHDSGMVVFKLERERPAHALHGNLLYYVKDKYLRKLDFTTQKDKAVLQLR-GGSRSLVYS---MSYNPAENAVVLVTRSSNLENSVYDLYTIPKDSDGQTPDAPEGKRSSGVTAIWVARNRIAVLDRS-HTLIIKNMKNEVTKKVQTP-NCDEIFYAGTGMLLLRDNDSVTLFDVQQKRNLGNVKIPKCRYVIWSPDMTTVALLSKHNITICNRKLQSLCSIHENTRVKSGTWDDTGVFIYTTSNHIKYAITNGDHGIIRTLNLPVYLTRIKGDKVFLLDRECKPCTMTIDTTEYRFKLALINRKYDEVLHMVRNAKLVGQSIIGYLQKKGYPEVALHFVKDEKTRFALALECMDIEVALEAAKALDDKDCWDKLSESALMLGNHQVVEMCYQRTKNFDKLSFLYLITGNLEKLRKMMKIAEIRKDHSGHFQNALYLGDVPERVKILKNCGQTSLAYLTAKTHGMDEEAEDIKSGVDPDTP-LPEPTGNGVPIVPPQPKSQMEENWPLLTVSKGFFEGIRAVRSGGGAKAAGGTGALAMEDTDMDEGAGAGWGDDDLGL-DGDEEAVGGEDDFKSADGEEGPGEG-DGGWDVDDGDLELPAELDGGTGSNVNTGATGDEDEGYFAPPTKGQSPAQNWASNSALPVDHIVAGSFESACRLLHDQVGVVNFEPYKSFFMTDFARGRTSFV-ALPALPALHGYPQSNWKEAGPKN--GLPAVGLKLNHLVQRLQTCYQLTTAGKFSDAITKFRNILLSIPLLVVETKQDEAEAVQLREICMNYLVGLTMETKRKEMPKSSLEEQIRVCEMAAYFSHCHLQPVHQILTLRTACNLFFKLKNFKTAGSFARRLLELGPKPEVAQQTRKILQACDKNPTDEHKLAYDEFNPFDIDAVEYSPIYRGAEKVECPFCSAKYSPQAANTVCAVCTVGQVAKSTQGL 1079 +LRKK VSP DD ++ + TDLFG D VVK+VLEGHDRGVNWASFHP++PLIVSGADDRQ+KLWRMND+KAWEVDT RGH NNVS V+FH +QD+IVSNSEDKSIR+WD KRT + TFRREHDRFWI++AHP +NL AAGHDSGM+VFKLERERPA ++ G+ ++YVKD++LR +FTTQK+ + +R GS SL S +SY+P ENAV++ S+++ Y+LY +PKDS G+ + K+ +G +A++VARNR AVL++S + +++KN+KNE+ KK P D I+YAGTG LL + D VT+FD+QQ+ LG ++ P +YV+WS DM +VALLSKH + I N+KL C++HE RVKSG WD+ GVFIYTT NHIKY + NGD GII+TL++P+Y+TR+ G+ +F LDR+ K +T+D +EY FKLAL+ ++YD V+ M++N++L GQ++I YLQ+KG+PEVALHFVKDEKTRF LALE +I++A+ +AK +DDKD W +L AL GN +VE YQRTKNF++L+FLYLITG ++K+ M KIA + G F NALYLGD +RV+IL+N GQ LAY+TA THG+ E A+ + + + + P LPE + ++PP P + +WPLL V G FEG TG +E+ DE AGA WGD+DL + D E G D F + +GE +G +GGWD++ DLELP E + T N G+ F P G + W S+L +H AG+F++A RLL Q+G+ NF P K F+ D G S++ AL P + + W E+ N G PA+ + RL+ Y+ TT GKF +A+ +F +IL +IPL+VV+++++ E +L EI Y++GL ME KRKE+ +Q E+AAYF++C LQ VH L L +A L +K KNF TA FAR LLE P A++ R++ Q C D +L YD NPF + Y PIYRG + V CP+C +++ P +C +C + V GL Sbjct: 166 ALRKKTVSPA----DDILRLTQMNTDLFGGVDAVVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNDTKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRIWDATKRTGIQTFRREHDRFWILSAHPEMNLLAAGHDSGMIVFKLERERPAFSVSGDTVFYVKDRFLRFFEFTTQKEVQLAPIRRPGSVSLNQSPKTLSYSPTENAVLIC---SDVDGGSYELYIVPKDSAGRADYLQDAKKGAGGSAVFVARNRFAVLEKSSNQVLVKNLKNEIVKKSPLPIATDAIYYAGTGNLLCKAEDRVTIFDLQQRLILGELQAPSVKYVVWSSDMESVALLSKHAVVIANKKLVHRCTLHETIRVKSGAWDENGVFIYTTLNHIKYCLPNGDSGIIKTLDVPIYITRVIGNNIFCLDRDGKNKLVTVDASEYIFKLALLRKRYDHVMSMIKNSQLCGQAVISYLQQKGFPEVALHFVKDEKTRFNLALESGNIQIAVASAKEIDDKDHWYRLGIEALRQGNVGIVEYAYQRTKNFERLAFLYLITGYMDKVGFMCKIAGQNNNLMGQFHNALYLGDALKRVEILENAGQLPLAYITATTHGLTEIADRLAAELGENIPSLPEGKARSL-LIPPAPLTA-SGDWPLLRVMHGIFEG-----------GLDATGKAELEED--DEAAGADWGDEDLDMVDASEAMANGGDGFDAEEGEANEEDGEEGGWDLE--DLELPPEAE--TPKN-----AGNARSAVFVAPPPGMPVSLIWTQKSSLAGEHAAAGNFDTAMRLLSRQLGIKNFAPLKPLFV-DLHMGSHSYLRALATAPIIPIAVEKGWSESASPNVRGPPALVFTFPQMEDRLKAAYKATTDGKFPEALRQFLSILHTIPLIVVDSRREVDEVKELIEIVREYVLGLRMELKRKELRDDVNRQQ----ELAAYFTNCKLQRVHMRLVLGSAMGLCYKQKNFATAEHFARMLLENNPNEAQARRARQVQQQC-SGKKDSSELNYDYRNPFVVCGATYVPIYRGQKDVSCPYCGSRFVPSIEGQLCTICELAVVGADASGL 1210 HSP 2 Score: 68.9366 bits (167), Expect = 2.135e-10 Identity = 35/106 (33.02%), Postives = 53/106 (50.00%), Query Frame = 0 Query: 51 HDRGVNWASFHPSMPLIVSGADDRQIKLWRMNDSKAWEVDTCRGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTAKRTCLHTFRREHDRFWIVAAHPTLNLFAAG 156 HD V FH + PL VSG DD +IK+W + + T GH + + +V FH IVS S+D++IR+W+ RTC+ + + HP +L + Sbjct: 50 HDGPVRGVHFHATQPLFVSGGDDYKIKVWNYKTHRC--LFTLHGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCVAVLTGHNHYVMCASFHPKEDLVVSA 153 HSP 3 Score: 64.6994 bits (156), Expect = 4.011e-9 Identity = 32/81 (39.51%), Postives = 45/81 (55.56%), Query Frame = 0 Query: 48 LEGHDRGVNWASFHPSMPLIVSGADDRQIKLWRMNDSKAWEVDTC----RGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWD 124 L GH + FH P IVS +DD+ I++W W+ TC GH + V FHP++DL+VS S D+++RVWD Sbjct: 89 LHGHLDYIRTVQFHHEYPWIVSASDDQTIRIWN------WQSRTCVAVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWD 163
BLAST of coatomer subunit alpha isoform 11 vs. SwissProt
Match: gi|75333114|sp|Q9AUR7.1|COPA2_ORYSJ (RecName: Full=Coatomer subunit alpha-2; AltName: Full=Alpha-coat protein 2; Short=Alpha-COP 2) HSP 1 Score: 992.26 bits (2564), Expect = 0.000e+0 Identity = 518/1084 (47.79%), Postives = 711/1084 (65.59%), Query Frame = 0 Query: 9 VFSLRKKNVSPGLSAMDDHMK-SGTGTDLFGQADCVVKHVLEGHDRGVNWASFHPSMPLIVSGADDRQIKLWRMNDSKAWEVDTCRGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTAKRTCLHTFRREHDRFWIVAAHPTLNLFAAGHDSGMVVFKLERERPAHALHGNLLYYVKDKYLRKLDFTTQKDKAVLQLRG-GSRSLVYS---MSYNPAENAVVLVTRSSNLENSVYDLYTIPKDSDGQTPDAPEGKRSSGVTAIWVARNRIAVLDRS-HTLIIKNMKNEVTKKVQTP-NCDEIFYAGTGMLLLRDNDSVTLFDVQQKRNLGNVKIPKCRYVIWSPDMTTVALLSKHNITICNRKLQSLCSIHENTRVKSGTWDDTGVFIYTTSNHIKYAITNGDHGIIRTLNLPVYLTRIKGDKVFLLDRECKPCTMTIDTTEYRFKLALINRKYDEVLHMVRNAKLVGQSIIGYLQKKGYPEVALHFVKDEKTRFALALECMDIEVALEAAKALDDKDCWDKLSESALMLGNHQVVEMCYQRTKNFDKLSFLYLITGNLEKLRKMMKIAEIRKDHSGHFQNALYLGDVPERVKILKNCGQTSLAYLTAKTHGMDEEAEDIKSGVDPDTP-LPEPTGNGVPIVPPQPKSQMEENWPLLTVSKGFFEGIRAVRSGGGAKAAGGTGALAMEDTDMDEGAGAGWGDDDLGL-DGDEEAVGGEDDFKSADGEEGPGEG-DGGWDVDDGDLELPAELDGGTGSNVNTGATGDEDEGYFAPPTKGQSPAQNWASNSALPVDHIVAGSFESACRLLHDQVGVVNFEPYKSFFMTDFARGRTSFV-ALPALPALHGYPQSNWKEAGPKN--GLPAVGLKLNHLVQRLQTCYQLTTAGKFSDAITKFRNILLSIPLLVVETKQDEAEAVQLREICMNYLVGLTMETKRKEMPKSSLEEQIRVCEMAAYFSHCHLQPVHQILTLRTACNLFFKLKNFKTAGSFARRLLELGPKPEVAQQTRKILQACDKNPTDEHKLAYDEFNPFDIDAVEYSPIYRGAEKVECPFCSAKYSPQAANTVCAVCTVGQVAKSTQGL 1079 + +LRKK+VSP DD ++ + TDLFG D VVK+VLEGHDRGVNWASFHP++PLIVSGADDRQ+K+WRMND+KAWEVDT RGH NNVS V+FH +QD+IVSNSEDKSIR+WD KRT + TFRREHDRFWI++AHP +NL AAGHDSGM+VFKLERERPA ++ G+ ++YVKD++LR +FTTQK+ + +R GS SL S +SY+P ENAV++ S+++ Y+LY +PKDS G+ + K+ +G +A++VARNR AVL++S + ++++N+KNE+ KK P D I+YAGTG LL + D VT+FD+QQ+ LG ++ P +YV+WS DM +VALLSKH + I N+KL C++HE RVKSG WD+ GVFIYTT NHIKY + NGD GII+TL++P+Y+TR+ G+ +F LDR+ K +T+D +EY FKLAL+ ++YD V+ M++N++L GQ++I YLQ+KG+PEVALHFVKDEKTRF LALE +I++A+ +AK +DDKD W +L AL GN +VE YQRTKNF++L+FLYLITG ++K+ M KIA + G F NALYLGD +RV+IL+N GQ LAY+TA THG+ E A+ + + + + P LPE + ++PP P + +WPLL V +G FEG TG +E+ DE AGA WGD+ L + D E G D F + +GE +G +GGWD++D +L AE T N G+ F P G + W S+L +H AG+F++A RLL Q+G+ NF P K F+ D G S++ AL P + + W E+ N G PA+ + RL+ Y+ TT GKF +A+ +F +IL +IPL+VV+++++ E +L EI Y++GL ME KRKE+ +Q E+AAYF++C LQ VH L L +A L +K KNF TA FAR LLE P A++ R++ Q C D +L YD NPF + Y PIYRG + V CP+C +++ P +C +C + V GL Sbjct: 164 ISALRKKSVSPA----DDILRLTQMNTDLFGGVDAVVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKIWRMNDTKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRIWDATKRTGIQTFRREHDRFWILSAHPEMNLLAAGHDSGMIVFKLERERPAFSVSGDTVFYVKDRFLRFFEFTTQKEVQLAPIRRPGSVSLNQSPKTLSYSPTENAVLIC---SDVDGGSYELYIVPKDSAGRADYLQDAKKGAGGSAVFVARNRFAVLEKSSNQVLVRNLKNEIVKKSPLPIATDAIYYAGTGSLLCKAEDRVTIFDLQQRLILGELQAPSVKYVVWSSDMESVALLSKHAVVIANKKLVHRCTLHETIRVKSGAWDENGVFIYTTLNHIKYCLPNGDSGIIKTLDVPIYITRVIGNNIFCLDRDGKNKLVTVDASEYIFKLALLRKRYDHVMSMIKNSQLCGQAVISYLQQKGFPEVALHFVKDEKTRFNLALESGNIQIAVASAKEIDDKDHWYRLGIEALRQGNVGIVEYAYQRTKNFERLAFLYLITGYMDKVGFMCKIAGQNNNLMGQFHNALYLGDAMKRVEILENAGQLPLAYITATTHGLTEIADRLAAELGENIPSLPEGKARSL-LIPPAPLTA-SGDWPLLRVMRGIFEG-----------GLDATGKAELEED--DEAAGADWGDEGLDIVDASEAMANGGDGFDAEEGEANEEDGEEGGWDLEDLELLPEAE----TPKN-----AGNARSAVFVAPPPGMPVSLIWTQKSSLAGEHAAAGNFDTAMRLLSRQLGIKNFAPLKPLFL-DLHMGSHSYLHALATAPIIPVAVEKGWSESASPNVRGPPALVFTFPQMEDRLKAAYKATTDGKFPEALRQFLSILHTIPLIVVDSRREVDEVKELIEIVREYVLGLRMELKRKELRDDVNRQQ----ELAAYFTNCKLQRVHMRLVLGSAMGLCYKQKNFATAEHFARMLLENNPNEAQARRARQVQQQC-SGKKDSSELNYDYRNPFVVCGATYVPIYRGQKDVSCPYCGSRFVPSIEGQLCTICELAVVGADASGL 1210 HSP 2 Score: 68.1662 bits (165), Expect = 3.491e-10 Identity = 35/106 (33.02%), Postives = 53/106 (50.00%), Query Frame = 0 Query: 51 HDRGVNWASFHPSMPLIVSGADDRQIKLWRMNDSKAWEVDTCRGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTAKRTCLHTFRREHDRFWIVAAHPTLNLFAAG 156 HD V FH + PL VSG DD +IK+W + + T GH + + +V FH IVS S+D++IR+W+ RTC+ + + HP +L + Sbjct: 50 HDGPVRGVHFHATQPLFVSGGDDYKIKVWNYKTHRC--LFTLHGHLDYIRTVQFHHECPWIVSASDDQTIRIWNWQSRTCVAVLTGHNHYVMCASFHPKEDLVVSA 153 HSP 3 Score: 64.6994 bits (156), Expect = 3.911e-9 Identity = 32/83 (38.55%), Postives = 46/83 (55.42%), Query Frame = 0 Query: 48 LEGHDRGVNWASFHPSMPLIVSGADDRQIKLWRMNDSKAWEVDTC----RGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTA 126 L GH + FH P IVS +DD+ I++W W+ TC GH + V FHP++DL+VS S D+++RVWD + Sbjct: 89 LHGHLDYIRTVQFHHECPWIVSASDDQTIRIWN------WQSRTCVAVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIS 165
BLAST of coatomer subunit alpha isoform 11 vs. SwissProt
Match: gi|75337326|sp|Q9SJT9.1|COPA2_ARATH (RecName: Full=Coatomer subunit alpha-2; AltName: Full=Alpha-coat protein 2; Short=Alpha-COP 2) HSP 1 Score: 988.023 bits (2553), Expect = 0.000e+0 Identity = 524/1080 (48.52%), Postives = 710/1080 (65.74%), Query Frame = 0 Query: 11 SLRKKNVSPGLSAMDDHMK-SGTGTDLFGQADCVVKHVLEGHDRGVNWASFHPSMPLIVSGADDRQIKLWRMNDSKAWEVDTCRGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTAKRTCLHTFRREHDRFWIVAAHPTLNLFAAGHDSGMVVFKLERERPAHALHGNLLYYVKDKYLRKLDFTTQKDKAVLQLR-GGSRSLVYS---MSYNPAENAVVLVTRSSNLENSVYDLYTIPKDSDGQTPDAPEGKRSSGVTAIWVARNRIAVLDRSHT-LIIKNMKNEVTKKVQTP-NCDEIFYAGTGMLLLRDNDSVTLFDVQQKRNLGNVKIPKCRYVIWSPDMTTVALLSKHNITICNRKLQSLCSIHENTRVKSGTWDDTGVFIYTTSNHIKYAITNGDHGIIRTLNLPVYLTRIKGDKVFLLDRECKPCTMTIDTTEYRFKLALINRKYDEVLHMVRNAKLVGQSIIGYLQKKGYPEVALHFVKDEKTRFALALECMDIEVALEAAKALDDKDCWDKLSESALMLGNHQVVEMCYQRTKNFDKLSFLYLITGNLEKLRKMMKIAEIRKDHSGHFQNALYLGDVPERVKILKNCGQTSLAYLTAKTHGMDEEAEDIKSGVDPDTP-LPEPTGNGVPIVPPQPKSQMEENWPLLTVSKGFFEGIRAVRSGGGAKAAGGTGALAMEDTDMDEGAGAGWGDDDLGLDGDEEAVGGEDDFKSADGEEGPGEGDGGWDVDDGDLELPAELDGGTGSNVNTGATGDEDEGYFAPPTKGQSPAQNWASNSALPVDHIVAGSFESACRLLHDQVGVVNFEPYKSFFMTDFARGRTSFVALPALPALHGYPQSNWKEAGPKN--GLPAVGLKLNHLVQRLQTCYQLTTAGKFSDAITKFRNILLSIPLLVVETKQDEAEAVQLREICMNYLVGLTMETKRKEMPKSSLEEQIRVCEMAAYFSHCHLQPVHQILTLRTACNLFFKLKNFKTAGSFARRLLELGPKPEV-AQQTRKILQACDKNPTDEHKLAYDEFNPFDIDAVEYSPIYRGAEKVECPFCSAKYSPQAANTVCAVCTVGQVAKSTQGL 1079 +L+KK+ SP DD M+ S +DLFG D +VK+VLEGHDRGVNWASFHP++PLIVSGADDRQ+KLWRMN++KAWEVDT RGH NNVSSV+FH +QD+IVSNSEDKSIRVWD KRT + TFRREHDRFWI+A HP +NL AAGHD+GM+VFKLERERPA AL G+ L+Y KD++LR +++TQKD V+ +R G+ SL S +SY+P ENAV++ S+L+ Y+LY IPKDS G++ + KR +G +A+++ARNR AVL++S + +++KN+KNEV KK P D IFYAGTG LL R D V +FD+QQ+ LG ++ P RYV+WS DM +VALLSKH I I ++KL C++HE RVKSG WDD GVFIYTT NHIKY + NGD GIIRTL++P+Y+T++ G+ +F LDR+ K +TI+ TEY FKLAL+ +KYD V+ M++N++L GQ++I YLQ+KG+PEVALHFV+DE+ RF LALE +I VA+ +A +++KD W +L AL GN ++VE YQ+TKNF++LSFLYLITGNL+KL K+MKIAE++ + G F NALYLGDV ERVKIL+N G LAY+TA HG+ + AE + + + P LPE + ++PP P +WPLL V KG FE GG A G ED + D G G D D + D EA+ A+ E + +GGW + DL+LP ELD A+ + F P +G +Q W+ S+L + AGSF++A RLLH Q+G+ NF P KS F+ F+ + A + P + + W E+ N G PA+ + L +L++ Y+ TTAGK S+A+ F +IL +IPL+VVE++++ E +L I Y++GL +E KR+EM + +Q E+AAYF+HC LQ H L +A + +K KN TA FAR LL+ P E A+ R+++QA ++N TD L YD NPF I Y PIY+G + V CP+C+A++ P +C+VC + + GL Sbjct: 166 ALKKKSASPA----DDLMRFSQMNSDLFGGVDAIVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDATKRTGIQTFRREHDRFWILAVHPEINLLAAGHDNGMIVFKLERERPAFALSGDSLFYAKDRFLRYYEYSTQKDSQVIPIRRPGTPSLNQSPRTLSYSPTENAVLIC---SDLDGGSYELYIIPKDSVGRSDVVQDAKRGTGGSAVFIARNRFAVLEKSTSQVLVKNLKNEVVKKSSLPIPTDAIFYAGTGNLLCRSEDKVVIFDLQQRLVLGELQTPFVRYVVWSNDMESVALLSKHTIIIASKKLVLQCTLHETIRVKSGAWDDNGVFIYTTLNHIKYCLPNGDSGIIRTLDVPIYITKVSGNTIFCLDRDGKNRAITINATEYIFKLALLRKKYDHVMSMIKNSQLCGQAMIAYLQQKGFPEVALHFVEDERIRFNLALESGNISVAVASATEINEKDHWYRLGVEALRQGNSRIVEFAYQQTKNFERLSFLYLITGNLDKLSKLMKIAEVKNNVMGQFHNALYLGDVKERVKILENAGHLPLAYITASVHGLTDIAERLAIELGDNVPSLPEGKTPSL-LMPPSP-IMCGGDWPLLRVMKGIFE-------GGLESANRGAVDEEEEDVEGDWGEGLDKFDVDGMENTDIEAI-----LDGAEAGEEEDDEEGGWGL---DLDLPPELD-------TPKASANARSSTFVTPPQGMPVSQIWSQKSSLAAEQAAAGSFDTAMRLLHRQLGIKNFAPLKSMFLDLFSGSHSYLRAFSSSPVVPLAIERGWSESSSPNVRGPPALVFDFSQLEAKLKSGYKATTAGKLSEALRVFLSILQTIPLVVVESRREVDEVKELVIIVKEYVLGLQLELKRREMKDDPVRQQ----ELAAYFTHCKLQTPHLRLAYFSAMTVCYKSKNMATAAHFARSLLDTNPTIESQARTARQVMQAAERNMTDATTLNYDFRNPFVICGSTYVPIYKGQKDVACPYCTARFVPSQEGNICSVCDLAVIGADASGL 1210 HSP 2 Score: 69.3218 bits (168), Expect = 1.433e-10 Identity = 38/108 (35.19%), Postives = 56/108 (51.85%), Query Frame = 0 Query: 49 EGHDRGVNWASFHPSMPLIVSGADDRQIKLWRMNDSKAWEVDTCRGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTAKRTCLHTFRREHDRFWIVAAHPTLNLFAAG 156 EG RGV+ FH S PL VSG DD +IK+W + + T GH + + +V FH IVS S+D++IR+W+ RTC+ + + HP +L + Sbjct: 51 EGPVRGVH---FHNSQPLFVSGGDDYKIKVWNYKTHRC--LFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSA 153 HSP 3 Score: 63.1586 bits (152), Expect = 1.238e-8 Identity = 32/81 (39.51%), Postives = 45/81 (55.56%), Query Frame = 0 Query: 48 LEGHDRGVNWASFHPSMPLIVSGADDRQIKLWRMNDSKAWEVDTC----RGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWD 124 L GH + FH P IVS +DD+ I++W W+ TC GH + V FHP++DL+VS S D+++RVWD Sbjct: 89 LLGHLDYIRTVQFHHENPWIVSASDDQTIRIWN------WQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWD 163
BLAST of coatomer subunit alpha isoform 11 vs. SwissProt
Match: gi|74859321|sp|Q55FR9.1|COPA_DICDI (RecName: Full=Coatomer subunit alpha; AltName: Full=Alpha-coat protein; Short=Alpha-COP) HSP 1 Score: 860.907 bits (2223), Expect = 0.000e+0 Identity = 475/1064 (44.64%), Postives = 655/1064 (61.56%), Query Frame = 0 Query: 35 DLFGQADCVVKHVLEGHDRGVNWASFHPSMPLIVSGADDRQIKLWRMNDSKAWEVDTCRGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTAKRTCLHTFRREHDRFWIVAAHPTLNLFAAGHDSGMVVFKLERERPAHALHGNL-LYYVKDKYLRKLDFTTQKDKAVLQL-RGGSRSLVYSMSYNPAENAVVLVTRSSNLENSVYDLYTIP-KDSDGQTPDAPEGKRSSGVTAIWVARNRIAVLDRSHTLIIKNMKNEVTKKVQTP-NCDEIFYAGT-GMLLLRDNDSVTLFDVQQKRNLGNVKIPKCRYVIWSPDMTTVALLSKHNITICNRKLQSLCSIHENTRVKSGTWDDTGVFIYTTSNHIKYAITNGDHGIIRTLNLPVYLTRIKGDKVFLLDRECKPCTMTIDTTEYRFKLALINRKYDEVLHMVRNAKLVGQSIIGYLQKKGYPEVALHFVKDEKTRFALALECMDIEVALEAAKALDDKDCWDKLSESALMLGNHQVVEMCYQRTKNFDKLSFLYLITGNLEKLRKMMKIAEIRKDHSGHFQNALYLGDVPERVKILKNCGQTSLAYLTAKTHGMDEEAEDIKSGVDPD--TPLPEPTGNGVPIVPPQPK--SQMEENWPLLTVSKGFFEGIRAVRSGGGAKAAGGTGALAMEDTDMDEG---AGAGWGDDDLGLDGDEEAVGGEDDFKSADGEEGPGEGDGGWDVDDGDLELPAELDGGTGSNVNTGATGDEDEGYFAPPTKGQSPAQNWASNSALPVDHIVAGSFESACRLLHDQVGVVNFEPYKSFFMTDFARGRTSFVALPALPALHGYPQSNWKEAGPKNGLPAVGLKLNHLVQRLQT-CYQLTTAGKFSDAITKFRNILLSIPLLVVETKQDEAEAVQLREICMNYLVGLTMETKRKEMPKSSLEEQI--RVCEMAAYFSHCHLQPVHQILTLRTACNLFFKLKNFKTAGSFARRLLELGPKPEVAQQTRKILQACDKNPT--DEHKLAYDEFNPFDIDAVEYSPIYRGAEKVECPFCSAKYSPQAANTVCAVCTVGQVAKSTQGLKI 1081 +LFG D V+ LEGHDRGVNWASFHP+ P IVS +DD Q+KLWRMND VDT RGHYNNVS +FHPRQDLI+SNSEDK+IRVWD K++ +H RR+HDRFW +A+HP NLFAAGHDSGM+VFKLERERP +G+ ++++K K DF + ++ + + S + +MSYN E A+++ SS+ E Y LY IP KDS+ K+ +GV AI+V R+R AVLD+ + ++I++++NE K+ Q P D I+ +G+ G +L++ D + +FD+QQK+ L +++ RYVIWS D VA L++ I + N+KL+ +C IHE KSG WDD GVFIY+TSNH+KY + NGD+G IRTL +Y+T +K +KVF +DRE K + IDTTEY KL+L+ + Y++V+ ++R +LVG++II YLQKKGYP+V +HFVKD++TRF LAL+ +I++AL +AK LDDKDCW++L AL GN+QVVEM Y RT FD+LSFLYL+ GNL L+KM I+ D F +LYLGDV ER+KIL+ G LAY+TA HG+ E+AE I + + D + LP+ +VPP P + E NWPLLT +K + + R G + TG ++ EG + GD E ED G DGGW+ DD E G G N ++ F PP G S + WA NS VDHI AGSFESA +L+ Q+G VNF+P KS FM F R+S + P+L Q K+ P + L HL++RL+T Y+ TT GKF+DA++ F IL +I V+ KQ+ E L IC Y++G+ +E +RKE+ + ++ R E+AAYF+HC+L P H IL+LR+A N +K+K+F A SFARRL+ L P P++A Q +K+ + PT D +L YDE NPF I A Y PIY+G+ ++CP+CS+ Y P VC+VC + ++ K QGL++ Sbjct: 188 ELFG-TDISVRLSLEGHDRGVNWASFHPTQPYIVSASDDHQVKLWRMNDPI---VDTFRGHYNNVSCALFHPRQDLIISNSEDKTIRVWDIIKKSTVHMIRRDHDRFWTLASHPNQNLFAAGHDSGMIVFKLERERPLFVQNGDSGVFFLKKKNFNSFDFQAGRTVSLFHISKLPSNNGTQTMSYNQTERAILV---SSDAEGGSYHLYKIPPKDSN-----TVNTKKGTGVAAIFVGRDRFAVLDKGNNVVIRDLENEEIKRCQIPFTIDWIYPSGSPGTILIQSEDKIHMFDIQQKKMLCEIQVHGVRYVIWSKDRNYVAFLTRDFIVLANKKLEQICMIHETVLPKSGVWDDNGVFIYSTSNHLKYLLQNGDNGTIRTLESTIYITGVKNNKVFAIDREFKNRIIEIDTTEYVLKLSLLQQNYNQVMTILRENRLVGKAIIAYLQKKGYPDV-VHFVKDDRTRFNLALDAGNIDIALSSAKILDDKDCWNRLGVEALKQGNYQVVEMAYSRTSEFDRLSFLYLLVGNLSTLKKM--ISYESSDIMSRFHFSLYLGDVEERIKILQEAGLHQLAYITASIHGLTEKAESIGNLITSDGKSQLPQLPKQSYLLVPPSPINCNPNELNWPLLTTTKSVSDVMGENRFGVEQSTSTPTGDWESDEDIFSEGKSQQQSSQQQQQQQQKGDWE----EDIL--IGDGNNGGGDDGGWERDDLK---GLEKIGTDGFN----NKQNDHVALFVPPQPGPSFSMIWARNSQFAVDHIAAGSFESAMNILNSQIGAVNFDPIKSMFMNIFMATRSSLGCNASTPSLLMPIQR-------KSAAPYITYGLGHLIERLKTNAYKSTTEGKFNDALSHFTYILHTIIFCSVDNKQEVNELKDLINICREYILGIKIELQRKELSIGAQKDSTLGRQAELAAYFTHCNLDPSHLILSLRSAMNCAYKVKHFNLAASFARRLISLNPNPDLATQAKKVFNFAQQTPTPSDIQQLNYDERNPFVICAHSYVPIYKGSPLIKCPYCSSCYLPTHKGKVCSVCQISEIGKDVQGLQV 1216 HSP 2 Score: 69.707 bits (169), Expect = 1.013e-10 Identity = 45/138 (32.61%), Postives = 67/138 (48.55%), Query Frame = 0 Query: 37 FGQADCVVKHVLEGHDRGVNWASFHPSMPLIVSGADDRQIKLWRMNDSKAWEVDTC----RGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTA----KRTCLHTFR-----REHDRFWIVAAHPTLNLFAAGHDSGM 161 + Q C+ L+GH + FH P IVS +DD I++W W+ TC GH + V S +FHP+ DL+VS S D++IR+WD + K T + +R R D + ++ L GHD G+ Sbjct: 80 YKQRRCLF--TLKGHKDYIRSVEFHREAPWIVSSSDDMVIRIWN------WQSRTCIAELNGHNHYVMSALFHPKDDLVVSASLDQTIRIWDISGLKKKMTTVKPYRENDPMRLQDELF--GTDISVRLSLEGHDRGV 207 HSP 3 Score: 68.1662 bits (165), Expect = 3.553e-10 Identity = 38/108 (35.19%), Postives = 55/108 (50.93%), Query Frame = 0 Query: 49 EGHDRGVNWASFHPSMPLIVSGADDRQIKLWRMNDSKAWEVDTCRGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTAKRTCLHTFRREHDRFWIVAAHPTLNLFAAG 156 EG RG+N FH + PL VSG DD +IK+W + + T +GH + + SV FH IVS+S+D IR+W+ RTC+ + HP +L + Sbjct: 51 EGPVRGIN---FHMTQPLFVSGGDDYKIKVWNYKQRRC--LFTLKGHKDYIRSVEFHREAPWIVSSSDDMVIRIWNWQSRTCIAELNGHNHYVMSALFHPKDDLVVSA 153
BLAST of coatomer subunit alpha isoform 11 vs. SwissProt
Match: gi|74698003|sp|Q96WV5.1|COPA_SCHPO (RecName: Full=Putative coatomer subunit alpha; AltName: Full=Alpha-coat protein; Short=Alpha-COP) HSP 1 Score: 778.089 bits (2008), Expect = 0.000e+0 Identity = 437/1078 (40.54%), Postives = 616/1078 (57.14%), Query Frame = 0 Query: 12 LRKKNVSPGLSAMDDHMK---SGTGTDLFGQADCVVKHVLEGHDRGVNWASFHPSMPLIVSGADDRQIKLWRMNDSKAWEVDTCRGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTAKRTCLHTFRREHDRFWIVAAHPTLNLFAAGHDSGMVVFKLERERPAHALHGNLLYYV-KDKYLRKLDFTTQKDKAVLQLR--GGSRSLVYSMSYNPAENAVVLVTRSSNLENSVYDLYTIPKDSDGQTPDAPEGKRSSGVTAIWVARNRIAVLDRS-HTLIIKNMKNEVTKKVQTPN-CDEIFYAGTGMLLLRDNDSVTLFDVQQKRNLGNVKIPKCRYVIWSPDMTTVALLSKHNITICNRKLQSLCSIHENTRVKSGTWDDTGVFIYTTSNHIKYAITNGDHGIIRTLNLPVYLTRIKGDKVFLLDRECKPCTMTIDTTEYRFKLALINRKYDEVLHMVRNAKLVGQSIIGYLQKKGYPEVALHFVKDEKTRFALALECMDIEVALEAAKALDDKDCWDKLSESALMLGNHQVVEMCYQRTKNFDKLSFLYLITGNLEKLRKMMKIAEIRKDHSGHFQNALYLGDVPERVKILKNCGQTSLAYLTAKTHGMDEEAEDIKSGVDPDTPLPEPTGNGVPIVPPQPKSQ-MEENWPLLTVSKGFFEGIRAVRSGGGAKAAGGTGALAMEDTDMDEGAGAGWGDDDLGLDGDEEAVGGEDDFKSADGEEGPGEGDGGWDVDDGDLELPAELDGGTGSNVNTGATGDEDEGYFAPPTKGQSPAQNWASNSALPVDHIVAGSFESACRLLHDQVGVVNFEPYKSFFMTDFARGRTSFVALPALPALHGYPQSNWKEAGPKNGLPAVGLKLNHL-VQRLQTCYQLTTAGKFSDAITKFRNILLSIPLLVVETKQDEAEAVQ-LREICMNYLVGLTMETKRKEMPKSSLEEQIRVCEMAAYFSHCHLQPVHQILTLRTACNLFFKLKNFKTAGSFARRLLELGPKPEVAQQTRKILQACDKNPTDEHKLAYDEFNPFDIDAVEYSPIYRGAEKVECPFCSAKYSPQAANTVCAVCTVGQVAKSTQG 1078 LR KN +P +++D + + DLFG D +VK VLEGHDRGVNW +FHP++PLI+S DDR +KLWRM SKAWEVDTCRGH+NNVS +FHP Q+LI+S SEDK+IRVWD +RT + TFRR++DRFW + HP LNLFAA HDSG++VFKLERERPAHAL+ N L YV K+K + D + V ++ G + S+SYNPAE +L +S+ +N VY+L + S+ + + + G AI+VARNR AV RS T+ IK++ N+VTK +Q P +IF+AG G +LL V LFD+QQK+ + + + +YV+WS D + ALL KH + I + L+ + SIHE R+KS W + V +Y T +H+KYA+ +GD G+I+TL +YL + KG+ VF L+R +P + ID TEY FKLAL+ + Y++VLH+++N+ LVGQ+II YLQKKGYPE+AL FV+D TRF LALEC ++E ALE A+ +D + W +L+ A+ GNH++ E+ +Q+ + F+KLSFLYLITGN EKL+KM IAE R D FQN+LYL +V R+ IL+ G +AYLTAK++G++E+A+ I S + + G P P ++ NWPLL S FE R LA+E + E + +D +E S E P E GW+V+D E A D ++ GA DE + W NS L DHI AG FESA ++L+ QVG +NF P K+ F+ + R + L L Y + N + A LP + L + L Y+L A K +A FR+I+ + L V ++EA+ + L + C Y+V L+ E +R+ + + E+ R E++ YF+ LQP+H I+ LR A N KLKN+K+A +LL+L A+ + + D+NP D ++ YD I +P+Y G + C C A Y N VC VC VG + + G Sbjct: 169 LRMKNAAPVSMSLEDQLAQAHNSISNDLFGSTDAIVKFVLEGHDRGVNWCAFHPTLPLILSAGDDRLVKLWRMTASKAWEVDTCRGHFNNVSCCLFHPHQELILSASEDKTIRVWDLNRRTAVQTFRRDNDRFWFITVHPKLNLFAAAHDSGVMVFKLERERPAHALNINTLLYVNKEKSIVSYDLLRAQSTTVASVKHLGSAWLPPRSLSYNPAEKVALL---TSSADNGVYELVNVSSRSN--SLPLKDNIKGPGDDAIFVARNRFAVFSRSDQTIEIKDLSNKVTKTIQLPEKTRDIFFAGMGHVLLSTATQVHLFDLQQKKIVSSFNANRVKYVVWSNDNSQAALLGKHYVYIVKKNLELITSIHETIRIKSAVWVENNVLLYATLDHLKYALMSGDTGVIKTLESTLYLVKAKGNMVFALNRAAEPVSFEIDPTEYLFKLALLRKDYEQVLHLIQNSNLVGQAIIAYLQKKGYPEIALQFVEDPSTRFELALECGNLETALELARTIDRPEVWSRLASDAMSYGNHKIAEITFQKLRYFEKLSFLYLITGNAEKLQKMAIIAEKRNDTLSLFQNSLYLNEVESRINILEQAGMYPIAYLTAKSNGLEEKAQQILSHCNKTEEEIKLPSLGSAFTTPVPVNETYTHNWPLLDTSHSTFEKSLQER----------MEQLAIERQEEQESEEEYEEVEQSLMDVVDEM--------SDLAESVPEEEVDGWEVEDLAPE-EAVNDVVDDASAFVGA----DEIFL------------WKRNSPLAADHIAAGDFESAMKILNKQVGAINFSPLKTRFLEIYTASRVYLPTISGLDPLVSYVRRNAETAERSQALPFITRNLASIKSHELHEAYRLVKANKILEAQICFRSIIY-LALTTVANSEEEADEISALIDECCRYIVALSCELERRRLGE---EDTKRALELSYYFASADLQPMHSIIALRLAINASHKLKNYKSASFLGNKLLQLAESGPAAEAANRAITLGDRNPHDAFEIEYDPHVEMRICPKTLTPVYSGDDFDVCSVCGAVYHKGYVNEVCTVCDVGGIGQKGTG 1202 HSP 2 Score: 67.3958 bits (163), Expect = 5.503e-10 Identity = 35/109 (32.11%), Postives = 53/109 (48.62%), Query Frame = 0 Query: 48 LEGHDRGVNWASFHPSMPLIVSGADDRQIKLWRMNDSKAWEVDTCRGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTAKRTCLHTFRREHDRFWIVAAHPTLNLFAAG 156 +GHD V +FHP+ PL VSG DD ++ +W S+ C GH + V FH I+S S+D++IR+W+ R C+ A HP+ +L + Sbjct: 49 FDGHDGPVRGIAFHPTQPLFVSGGDDYKVNVWNYK-SRKLLFSLC-GHMDYVRVCTFHHEYPWILSCSDDQTIRIWNWQSRNCIAILTGHSHYVMCAAFHPSEDLIVSA 155 HSP 3 Score: 61.2326 bits (147), Expect = 4.442e-8 Identity = 31/79 (39.24%), Postives = 43/79 (54.43%), Query Frame = 0 Query: 48 LEGHDRGVNWASFHPSMPLIVSGADDRQIKLWRMNDSKAWEVDTCRGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTA 126 L GH V +FH P I+S +DD+ I++W + T HY V FHP +DLIVS S D+++RVWD + Sbjct: 91 LCGHMDYVRVCTFHHEYPWILSCSDDQTIRIWNWQSRNCIAILTGHSHY--VMCAAFHPSEDLIVSASLDQTVRVWDIS 167
BLAST of coatomer subunit alpha isoform 11 vs. nr
Match: gi|826343384|ref|XP_012517333.1| (PREDICTED: coatomer subunit alpha isoform X2 [Propithecus coquereli]) HSP 1 Score: 1564.28 bits (4049), Expect = 0.000e+0 Identity = 752/1077 (69.82%), Postives = 879/1077 (81.62%), Query Frame = 0 Query: 9 VFSLRKKNVSPGLSAMDDHMKSGTGTDLFGQADCVVKHVLEGHDRGVNWASFHPSMPLIVSGADDRQIKLWRMNDSKAWEVDTCRGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTAKRTCLHTFRREHDRFWIVAAHPTLNLFAAGHDSGMVVFKLERERPAHALHGNLLYYVKDKYLRKLDFTTQKDKAVLQLRGGSRSLVYSMSYNPAENAVVLVTRSSNLENSVYDLYTIPKDSDGQTPDAPEGKRSSGVTAIWVARNRIAVLDRSHTLIIKNMKNEVTKKVQTPNCDEIFYAGTGMLLLRDNDSVTLFDVQQKRNLGNVKIPKCRYVIWSPDMTTVALLSKHNITICNRKLQSLCSIHENTRVKSGTWDDTGVFIYTTSNHIKYAITNGDHGIIRTLNLPVYLTRIKGDKVFLLDRECKPCTMTIDTTEYRFKLALINRKYDEVLHMVRNAKLVGQSIIGYLQKKGYPEVALHFVKDEKTRFALALECMDIEVALEAAKALDDKDCWDKLSESALMLGNHQVVEMCYQRTKNFDKLSFLYLITGNLEKLRKMMKIAEIRKDHSGHFQNALYLGDVPERVKILKNCGQTSLAYLTAKTHGMDEEAEDIKSGVDPDT-PLPEPTGNGVPIVPPQPKSQMEENWPLLTVSKGFFEGIRAVRSGGGAKAAGGTGALAMEDTDMDEGAGAGWGDD-DLGLD--GDEEAVGGEDDFKSADGEEGPGEGDGGWDVDDGDLELPAELDGGTGSNVNTGATGDEDEGYFAPPTKGQSPAQNWASNSALPVDHIVAGSFESACRLLHDQVGVVNFEPYKSFFMTDFARGRTSFVALPALPALHGYPQSNWKEAGPKNGLPAVGLKLNHLVQRLQTCYQLTTAGKFSDAITKFRNILLSIPLLVVETKQDEAEAVQLREICMNYLVGLTMETKRKEMPKSSLEEQIRVCEMAAYFSHCHLQPVHQILTLRTACNLFFKLKNFKTAGSFARRLLELGPKPEVAQQTRKILQACDKNPTDEHKLAYDEFNPFDIDAVEYSPIYRGAEKVECPFCSAKYSPQAANTVCAVCTVGQVAKSTQGLKI 1081 + LRKKN+SPG A++ ++ TG DLFG D VVKHVLEGHDRGVNWA+FHP+MPLIVSGADDRQ+K+WRMN+SKAWEVDTCRGHYNNVS +FHPRQ+LI+SNSEDKSIRVWD +KRT + TFRR+HDRFW++AAHP LNLFAAGHD GM+VFKLERERPA+A+HGN+L+YVKD++LR+LDF + KD AV+QLR GS+ V++MSYNPAENAV+L TR+SNLENS YDLYTIPKD+D Q PDAPEGKRSSG+TA+WVARNR AVLDR H+L+IKN+KNE+TKKVQ PNCDEIFYAGTG LLLRD DS+TLFDVQQKR L +VKI K +YVIWS DM+ VALL+KH I ICNRKL +LC+IHEN RVKSG WD++GVFIYTTSNHIKYA+T GDHGIIRTL+LP+Y+TR+KG+ V+ LDREC+P +TID TE++FKLALINRKYDEVLHMVRNAKLVGQSII YLQKKGYPEVALHFVKDEKTRF+LALEC +IE+ALEAAKALDDK+CW+KL E AL+ GNHQ+VEMCYQRTKNFDKLSFLYLITGNLEKLRKMMKIAEIRKD SGH+QNALYLGDV ERV+ILKNCGQ SLAYLTA THG+DEEAE +K DP+ +P+ N + PP P ++ NWPLLTVSKGFFEG A + GGA AA D D+D GWG+D +L LD G EA G D G+E EG GGWDV++ DLELP ELD + +GA G ++G+F PPTKG SP Q W +NS LPVDHI+AGSFE+A RLLHDQVGV+ F PYK F+ +ARGRT++ ALP LPAL+GYP NWK+AG KNG+PAVGLKLN L+QRLQ CYQLTT GKF +A+ KFR+ILLS+PLLVV+ KQ+ AEA QL IC Y+VGL+ME +RK++PK +LE+Q R+CEMAAYF+H +LQPVH IL LRTA NLFFKLKNFKTA +FARRLLELGPKPEVAQQTRKIL AC+KNPTD +L YD NPFDI A Y PIYRG +CP A YSP+ +C V TV ++ K GL+I Sbjct: 164 ISGLRKKNLSPG--AVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAHPNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLHYVKDRFLRQLDFNSSKDVAVMQLRSGSKFPVFNMSYNPAENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVWVARNRFAVLDRMHSLLIKNLKNEITKKVQVPNCDEIFYAGTGNLLLRDADSITLFDVQQKRTLASVKISKVKYVIWSADMSHVALLAKHAIVICNRKLDALCNIHENIRVKSGAWDESGVFIYTTSNHIKYAVTTGDHGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLTIDPTEFKFKLALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEIALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDKLSFLYLITGNLEKLRKMMKIAEIRKDMSGHYQNALYLGDVSERVRILKNCGQKSLAYLTAATHGLDEEAESLKETFDPEKETIPDIDPNAKLLQPPAPIMPLDTNWPLLTVSKGFFEGSIASKGKGGALAA---------DIDIDTVGTEGWGEDAELQLDEEGFVEATEGLGDDALGKGQE---EG-GGWDVEE-DLELPPELD------IPSGAAGGAEDGFFVPPTKGTSPTQIWCNNSQLPVDHILAGSFETAMRLLHDQVGVIQFGPYKQLFLQTYARGRTTYQALPCLPALYGYPNRNWKDAGLKNGVPAVGLKLNDLIQRLQLCYQLTTVGKFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLITICREYIVGLSMEIERKKLPKETLEQQKRICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFKTAATFARRLLELGPKPEVAQQTRKILSACEKNPTDACQLNYDMHNPFDICAASYRPIYRGKPVEKCPLSGACYSPEFKGQICKVTTVTEIGKDVIGLRI 1218 HSP 2 Score: 66.6254 bits (161), Expect = 3.208e-7 Identity = 35/115 (30.43%), Postives = 54/115 (46.96%), Query Frame = 0 Query: 42 CVVKHVLEGHDRGVNWASFHPSMPLIVSGADDRQIKLWRMNDSKAWEVDTCRGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTAKRTCLHTFRREHDRFWIVAAHPTLNLFAAG 156 C + + HD V FH PL VSG DD +IK+W + + T GH + + + FH I+S S+D++IRVW+ RTC+ + HP+ +L + Sbjct: 41 CTLIDKFDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRC--LFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSA 153
BLAST of coatomer subunit alpha isoform 11 vs. nr
Match: gi|724811166|ref|XP_010359050.1| (PREDICTED: coatomer subunit alpha [Rhinopithecus roxellana] >gi|1059143463|ref|XP_017720342.1| PREDICTED: coatomer subunit alpha isoform X2 [Rhinopithecus bieti]) HSP 1 Score: 1564.28 bits (4049), Expect = 0.000e+0 Identity = 748/1077 (69.45%), Postives = 878/1077 (81.52%), Query Frame = 0 Query: 9 VFSLRKKNVSPGLSAMDDHMKSGTGTDLFGQADCVVKHVLEGHDRGVNWASFHPSMPLIVSGADDRQIKLWRMNDSKAWEVDTCRGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTAKRTCLHTFRREHDRFWIVAAHPTLNLFAAGHDSGMVVFKLERERPAHALHGNLLYYVKDKYLRKLDFTTQKDKAVLQLRGGSRSLVYSMSYNPAENAVVLVTRSSNLENSVYDLYTIPKDSDGQTPDAPEGKRSSGVTAIWVARNRIAVLDRSHTLIIKNMKNEVTKKVQTPNCDEIFYAGTGMLLLRDNDSVTLFDVQQKRNLGNVKIPKCRYVIWSPDMTTVALLSKHNITICNRKLQSLCSIHENTRVKSGTWDDTGVFIYTTSNHIKYAITNGDHGIIRTLNLPVYLTRIKGDKVFLLDRECKPCTMTIDTTEYRFKLALINRKYDEVLHMVRNAKLVGQSIIGYLQKKGYPEVALHFVKDEKTRFALALECMDIEVALEAAKALDDKDCWDKLSESALMLGNHQVVEMCYQRTKNFDKLSFLYLITGNLEKLRKMMKIAEIRKDHSGHFQNALYLGDVPERVKILKNCGQTSLAYLTAKTHGMDEEAEDIKSGVDPDT-PLPEPTGNGVPIVPPQPKSQMEENWPLLTVSKGFFEGIRAVRSGGGAKAAGGTGALAMEDTDMDEGAGAGWGDD---DLGLDGDEEAVGGEDDFKSADGEEGPGEGDGGWDVDDGDLELPAELDGGTGSNVNTGATGDEDEGYFAPPTKGQSPAQNWASNSALPVDHIVAGSFESACRLLHDQVGVVNFEPYKSFFMTDFARGRTSFVALPALPALHGYPQSNWKEAGPKNGLPAVGLKLNHLVQRLQTCYQLTTAGKFSDAITKFRNILLSIPLLVVETKQDEAEAVQLREICMNYLVGLTMETKRKEMPKSSLEEQIRVCEMAAYFSHCHLQPVHQILTLRTACNLFFKLKNFKTAGSFARRLLELGPKPEVAQQTRKILQACDKNPTDEHKLAYDEFNPFDIDAVEYSPIYRGAEKVECPFCSAKYSPQAANTVCAVCTVGQVAKSTQGLKI 1081 + LRKKN+SPG A++ ++ TG DLFG D VVKHVLEGHDRGVNWA+FHP+MPLIVSGADDRQ+K+WRMN+SKAWEVDTCRGHYNNVS +FHPRQ+LI+SNSEDKSIRVWD +KRT + TFRR+HDRFW++AAHP LNLFAAGHD GM+VFKLERERPA+A+HGN+L+YVKD++LR+LDF + KD AV+QLR GS+ V++MSYNPAENAV+L TR+SNLENS YDLYTIPKD+D Q PDAPEGKRSSG+TA+WVARNR AVLDR H+L+IKN+KNE+TKKVQ PNCDEIFYAGTG LLLRD DS+TLFDVQQKR L +VKI K +YVIWS DM+ VALL+KH I ICNRKL +LC+IHEN RVKSG WD++GVFIYTTSNHIKYA+T GDHGIIRTL+LP+Y+TR+KG+ V+ LDREC+P +TID TE++FKLALINRKYDEVLHMVRNAKLVGQSII YLQKKGYPEVALHFVKDEKTRF+LALEC +IE+ALEAAKALDDK+CW+KL E AL+ GNHQ+VEMCYQRTKNFDKLSFLYLITGNLEKLRKMMKIAEIRKD SGH+QNALYLGDV ERV+ILKNCGQ SLAYLTA THG+DEEAE +K DP+ +P+ N + PP P ++ NWPLLTVSKGFFEG A + GGA AA D D+D GWG+D L DG EA G D G+E EG GGWDV++ DLELP ELD ++ GA G ++G+F PPTKG SP Q W +NS LPVDHI+AGSFE+A RLLHDQVGV+ F PYK F+ +ARGRT++ ALP LP+++GYP NWK+AG KNG+PAVGLKLN L+QRLQ CYQLTT GKF +A+ KFR+ILLS+PLLVV+ KQ+ AEA QL IC Y+VGL+ME +RK++PK +LE+Q R+CEMAAYF+H +LQPVH IL LRTA NLFFKLKNFKTA +FARRLLELGPKPEVAQQTRKIL AC+KNP D ++L YD NPFDI A Y PIYRG +CP A YSP+ + +C V TV ++ K GL+I Sbjct: 164 ISGLRKKNLSPG--AVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAHPNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLHYVKDRFLRQLDFNSSKDVAVMQLRSGSKFPVFNMSYNPAENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVWVARNRFAVLDRMHSLLIKNLKNEITKKVQVPNCDEIFYAGTGNLLLRDADSITLFDVQQKRTLASVKISKVKYVIWSADMSHVALLAKHAIVICNRKLDALCNIHENIRVKSGAWDESGVFIYTTSNHIKYAVTTGDHGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLTIDPTEFKFKLALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEIALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDKLSFLYLITGNLEKLRKMMKIAEIRKDMSGHYQNALYLGDVSERVRILKNCGQKSLAYLTAATHGLDEEAESLKETFDPEKETIPDIDPNANLLQPPAPIMPLDTNWPLLTVSKGFFEGTIASKGKGGALAA---------DIDIDTVGTEGWGEDAELQLDEDGFVEATEGLGDDALGKGQE---EG-GGWDVEE-DLELPPELD------ISPGAAGGAEDGFFVPPTKGTSPTQIWCNNSQLPVDHILAGSFETAMRLLHDQVGVIQFGPYKQLFLQTYARGRTTYQALPCLPSMYGYPNRNWKDAGLKNGVPAVGLKLNDLIQRLQLCYQLTTVGKFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLITICREYIVGLSMEIERKKLPKETLEQQKRICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFKTAATFARRLLELGPKPEVAQQTRKILSACEKNPADAYQLNYDMHNPFDICAASYRPIYRGKPVEKCPLSGACYSPEFKSQICRVTTVTEIGKDVIGLRI 1218 HSP 2 Score: 66.2402 bits (160), Expect = 3.491e-7 Identity = 35/115 (30.43%), Postives = 54/115 (46.96%), Query Frame = 0 Query: 42 CVVKHVLEGHDRGVNWASFHPSMPLIVSGADDRQIKLWRMNDSKAWEVDTCRGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTAKRTCLHTFRREHDRFWIVAAHPTLNLFAAG 156 C + + HD V FH PL VSG DD +IK+W + + T GH + + + FH I+S S+D++IRVW+ RTC+ + HP+ +L + Sbjct: 41 CTLIDKFDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRC--LFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSA 153
BLAST of coatomer subunit alpha isoform 11 vs. nr
Match: gi|694889737|ref|XP_009433813.1| (coatomer subunit alpha isoform X6 [Pan troglodytes] >gi|1034075305|ref|XP_016785825.1| coatomer subunit alpha isoform X6 [Pan troglodytes]) HSP 1 Score: 1564.28 bits (4049), Expect = 0.000e+0 Identity = 750/1087 (69.00%), Postives = 879/1087 (80.86%), Query Frame = 0 Query: 9 VFSLRKKNVSPGLSAMDDHMKSGTGTDLFGQADCVVKHVLEGHDRGVNWASFHPSMPLIVSGADDRQIKLWRMNDSKAWEVDTCRGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTAKRTCLHTFRREHDRFWIVAAHPTLNLFAAGHDSGMVVFKLERERPAHALHGNLLYYVKDKYLRKLDFTTQKDKAVLQLRGGSRSLVYSMSYNPAENAVVLVTRSSNLENSVYDLYTIPKDSDGQTPDAPEGKRSSGVTAIWVARNRIAVLDRSHTLIIKNMKNEVTKKVQTPNCDEIFYAGTGMLLLRDNDSVTLFDVQQKRNLGNVKIPKCRYVIWSPDMTTVALLSKHN---------ITICNRKLQSLCSIHENTRVKSGTWDDTGVFIYTTSNHIKYAITNGDHGIIRTLNLPVYLTRIKGDKVFLLDRECKPCTMTIDTTEYRFKLALINRKYDEVLHMVRNAKLVGQSIIGYLQKKGYPEVALHFVKDEKTRFALALECMDIEVALEAAKALDDKDCWDKLSESALMLGNHQVVEMCYQRTKNFDKLSFLYLITGNLEKLRKMMKIAEIRKDHSGHFQNALYLGDVPERVKILKNCGQTSLAYLTAKTHGMDEEAEDIKSGVDPDT-PLPEPTGNGVPIVPPQPKSQMEENWPLLTVSKGFFEGIRAVRSGGGAKAAGGTGALAMEDTDMDEGAGAGWGDD-DLGLDGD---EEAVGGEDDFKSADGEEGPGEGDGGWDVDDGDLELPAELDGGTGSNVNTGATGDEDEGYFAPPTKGQSPAQNWASNSALPVDHIVAGSFESACRLLHDQVGVVNFEPYKSFFMTDFARGRTSFVALPALPALHGYPQSNWKEAGPKNGLPAVGLKLNHLVQRLQTCYQLTTAGKFSDAITKFRNILLSIPLLVVETKQDEAEAVQLREICMNYLVGLTMETKRKEMPKSSLEEQIRVCEMAAYFSHCHLQPVHQILTLRTACNLFFKLKNFKTAGSFARRLLELGPKPEVAQQTRKILQACDKNPTDEHKLAYDEFNPFDIDAVEYSPIYRGAEKVECPFCSAKYSPQAANTVCAVCTVGQVAKSTQGLKI 1081 + LRKKN+SPG A++ ++ TG DLFG D VVKHVLEGHDRGVNWA+FHP+MPLIVSGADDRQ+K+WRMN+SKAWEVDTCRGHYNNVS +FHPRQ+LI+SNSEDKSIRVWD +KRT + TFRR+HDRFW++AAHP LNLFAAGHD GM+VFKLERERPA+A+HGN+L+YVKD++LR+LDF + KD AV+QLR GS+ V++MSYNPAENAV+L TR+SNLENS YDLYTIPKD+D Q PDAPEGKRSSG+TA+WVARNR AVLDR H+L+IKN+KNE+TKKVQ PNCDEIFYAGTG LLLRD DS+TLFDVQQKR L +VKI K +YVIWS DM+ VALL+KH I ICNRKL +LC+IHEN RVKSG WD++GVFIYTTSNHIKYA+T GDHGIIRTL+LP+Y+TR+KG+ V+ LDREC+P +TID TE++FKLALINRKYDEVLHMVRNAKLVGQSII YLQKKGYPEVALHFVKDEKTRF+LALEC +IE+ALEAAKALDDK+CW+KL E AL+ GNHQ+VEMCYQRTKNFDKLSFLYLITGNLEKLRKMMKIAEIRKD SGH+QNALYLGDV ERV+ILKNCGQ SLAYLTA THG+DEEAE +K DP+ +P+ N + PP P ++ NWPLLTVSKGFFEG A + GGA AA D D+D GWG+D +L LD D E G DD EEG GGWDV++ DLELP ELD ++ GA G ++G+F PPTKG SP Q W +NS LPVDHI+AGSFE+A RLLHDQVGV+ F PYK F+ +ARGRT++ ALP LP+++GYP NWK+AG KNG+PAVGLKLN L+QRLQ CYQLTT GKF +A+ KFR+ILLS+PLLVV+ KQ+ AEA QL IC Y+VGL+MET+RK++PK +LE+Q R+CEMAAYF+H +LQPVH IL LRTA NLFFKLKNFKTA +FARRLLELGPKPEVAQQTRKIL AC+KNPTD ++L YD NPFDI A Y PIYRG +CP A YSP+ +C V TV ++ K GL+I Sbjct: 26 ISGLRKKNLSPG--AVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAHPNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLHYVKDRFLRQLDFNSSKDVAVMQLRSGSKFPVFNMSYNPAENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVWVARNRFAVLDRMHSLLIKNLKNEITKKVQVPNCDEIFYAGTGNLLLRDADSITLFDVQQKRTLASVKISKVKYVIWSADMSHVALLAKHEHSCPLPLTAIVICNRKLDALCNIHENIRVKSGAWDESGVFIYTTSNHIKYAVTTGDHGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLTIDPTEFKFKLALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEIALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDKLSFLYLITGNLEKLRKMMKIAEIRKDMSGHYQNALYLGDVSERVRILKNCGQKSLAYLTAATHGLDEEAESLKETFDPEKETIPDIDPNAKLLQPPAPIMPLDTNWPLLTVSKGFFEGTIASKGKGGALAA---------DIDIDTVGTEGWGEDAELQLDEDGFVEATEGLGDDALGKGQEEG-----GGWDVEE-DLELPPELD------ISPGAAGGAEDGFFVPPTKGTSPTQIWCNNSQLPVDHILAGSFETAMRLLHDQVGVIQFGPYKQLFLQTYARGRTTYQALPCLPSMYGYPNRNWKDAGLKNGVPAVGLKLNDLIQRLQLCYQLTTVGKFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLITICREYIVGLSMETERKKLPKETLEQQKRICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFKTAATFARRLLELGPKPEVAQQTRKILSACEKNPTDAYQLNYDMHNPFDICAASYRPIYRGKPVEKCPLSGACYSPEFKGQICRVTTVTEIGKDVIGLRI 1089
BLAST of coatomer subunit alpha isoform 11 vs. nr
Match: gi|635103664|ref|XP_007974683.1| (PREDICTED: coatomer subunit alpha isoform X2 [Chlorocebus sabaeus] >gi|795288943|ref|XP_011923020.1| PREDICTED: coatomer subunit alpha isoform X2 [Cercocebus atys] >gi|795324382|ref|XP_011825767.1| PREDICTED: coatomer subunit alpha isoform X2 [Mandrillus leucophaeus] >gi|1297659233|ref|XP_023070009.1| coatomer subunit alpha isoform X2 [Piliocolobus tephrosceles]) HSP 1 Score: 1564.28 bits (4049), Expect = 0.000e+0 Identity = 748/1077 (69.45%), Postives = 877/1077 (81.43%), Query Frame = 0 Query: 9 VFSLRKKNVSPGLSAMDDHMKSGTGTDLFGQADCVVKHVLEGHDRGVNWASFHPSMPLIVSGADDRQIKLWRMNDSKAWEVDTCRGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTAKRTCLHTFRREHDRFWIVAAHPTLNLFAAGHDSGMVVFKLERERPAHALHGNLLYYVKDKYLRKLDFTTQKDKAVLQLRGGSRSLVYSMSYNPAENAVVLVTRSSNLENSVYDLYTIPKDSDGQTPDAPEGKRSSGVTAIWVARNRIAVLDRSHTLIIKNMKNEVTKKVQTPNCDEIFYAGTGMLLLRDNDSVTLFDVQQKRNLGNVKIPKCRYVIWSPDMTTVALLSKHNITICNRKLQSLCSIHENTRVKSGTWDDTGVFIYTTSNHIKYAITNGDHGIIRTLNLPVYLTRIKGDKVFLLDRECKPCTMTIDTTEYRFKLALINRKYDEVLHMVRNAKLVGQSIIGYLQKKGYPEVALHFVKDEKTRFALALECMDIEVALEAAKALDDKDCWDKLSESALMLGNHQVVEMCYQRTKNFDKLSFLYLITGNLEKLRKMMKIAEIRKDHSGHFQNALYLGDVPERVKILKNCGQTSLAYLTAKTHGMDEEAEDIKSGVDPDT-PLPEPTGNGVPIVPPQPKSQMEENWPLLTVSKGFFEGIRAVRSGGGAKAAGGTGALAMEDTDMDEGAGAGWGDD---DLGLDGDEEAVGGEDDFKSADGEEGPGEGDGGWDVDDGDLELPAELDGGTGSNVNTGATGDEDEGYFAPPTKGQSPAQNWASNSALPVDHIVAGSFESACRLLHDQVGVVNFEPYKSFFMTDFARGRTSFVALPALPALHGYPQSNWKEAGPKNGLPAVGLKLNHLVQRLQTCYQLTTAGKFSDAITKFRNILLSIPLLVVETKQDEAEAVQLREICMNYLVGLTMETKRKEMPKSSLEEQIRVCEMAAYFSHCHLQPVHQILTLRTACNLFFKLKNFKTAGSFARRLLELGPKPEVAQQTRKILQACDKNPTDEHKLAYDEFNPFDIDAVEYSPIYRGAEKVECPFCSAKYSPQAANTVCAVCTVGQVAKSTQGLKI 1081 + LRKKN+SPG A++ ++ TG DLFG D VVKHVLEGHDRGVNWA+FHP+MPLIVSGADDRQ+K+WRMN+SKAWEVDTCRGHYNNVS +FHPRQ+LI+SNSEDKSIRVWD +KRT + TFRR+HDRFW++AAHP LNLFAAGHD GM+VFKLERERPA+A+HGN+L+YVKD++LR+LDF + KD AV+QLR GS+ V++MSYNPAENAV+L TR+SNLENS YDLYTIPKD+D Q PDAPEGKRSSG+TA+WVARNR AVLDR H+L+IKN+KNE+TKKVQ PNCDEIFYAGTG LLLRD DS+TLFDVQQKR L +VKI K +YVIWS DM+ VALL+KH I ICNRKL +LC+IHEN RVKSG WD++GVFIYTTSNHIKYA+T GDHGIIRTL+LP+Y+TR+KG+ V+ LDREC+P +TID TE++FKLALINRKYDEVLHMVRNAKLVGQSII YLQKKGYPEVALHFVKDEKTRF+LALEC +IE+ALEAAKALDDK+CW+KL E AL+ GNHQ+VEMCYQRTKNFDKLSFLYLITGNLEKLRKMMKIAEIRKD SGH+QNALYLGDV ERV+ILKNCGQ SLAYLTA THG+DEEAE +K DP+ +P+ N + PP P ++ NWPLLTVSKGFFEG A + GGA AA D D+D GWG+D L DG EA G D G+E EG GGWDV++ DLELP ELD ++ GA G ++G+F PPTKG SP Q W +NS LPVDHI+AGSFE+A RLLHDQVGV+ F PYK F+ +ARGRT++ ALP LP+++GYP NWK+AG KNG+PAVGLKLN L+QRLQ CYQLTT GKF +A+ KFR+ILLS+PLLVV+ KQ+ AEA QL IC Y+VGL+ME +RK++PK +LE+Q R+CEMAAYF+H +LQPVH IL LRTA NLFFKLKNFKTA +FARRLLELGPKPEVAQQTRKIL AC+KNP D ++L YD NPFDI A Y PIYRG +CP A YSP+ +C V TV ++ K GL+I Sbjct: 164 ISGLRKKNLSPG--AVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAHPNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLHYVKDRFLRQLDFNSSKDVAVMQLRSGSKFPVFNMSYNPAENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVWVARNRFAVLDRMHSLLIKNLKNEITKKVQVPNCDEIFYAGTGNLLLRDADSITLFDVQQKRTLASVKISKVKYVIWSADMSHVALLAKHAIVICNRKLDALCNIHENIRVKSGAWDESGVFIYTTSNHIKYAVTTGDHGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLTIDPTEFKFKLALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEIALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDKLSFLYLITGNLEKLRKMMKIAEIRKDMSGHYQNALYLGDVSERVRILKNCGQKSLAYLTAATHGLDEEAESLKETFDPEKETIPDIDPNAKLLQPPAPIMPLDTNWPLLTVSKGFFEGTIASKGKGGALAA---------DIDIDTVGTEGWGEDAELQLDEDGFVEATEGLGDDALGKGQE---EG-GGWDVEE-DLELPPELD------ISPGAAGGAEDGFFVPPTKGTSPTQIWCNNSQLPVDHILAGSFETAMRLLHDQVGVIQFGPYKQLFLQTYARGRTTYQALPCLPSMYGYPNRNWKDAGLKNGVPAVGLKLNDLIQRLQLCYQLTTVGKFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLITICREYIVGLSMEIERKKLPKETLEQQKRICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFKTAATFARRLLELGPKPEVAQQTRKILSACEKNPADAYQLNYDMHNPFDICAASYRPIYRGKPVEKCPLSGACYSPEFKGQICRVTTVTEIGKDVIGLRI 1218 HSP 2 Score: 66.6254 bits (161), Expect = 3.235e-7 Identity = 35/115 (30.43%), Postives = 54/115 (46.96%), Query Frame = 0 Query: 42 CVVKHVLEGHDRGVNWASFHPSMPLIVSGADDRQIKLWRMNDSKAWEVDTCRGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTAKRTCLHTFRREHDRFWIVAAHPTLNLFAAG 156 C + + HD V FH PL VSG DD +IK+W + + T GH + + + FH I+S S+D++IRVW+ RTC+ + HP+ +L + Sbjct: 41 CTLIDKFDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRC--LFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSA 153
BLAST of coatomer subunit alpha isoform 11 vs. nr
Match: gi|507575260|ref|XP_004671175.1| (PREDICTED: coatomer subunit alpha isoform X2 [Jaculus jaculus]) HSP 1 Score: 1564.28 bits (4049), Expect = 0.000e+0 Identity = 747/1077 (69.36%), Postives = 878/1077 (81.52%), Query Frame = 0 Query: 9 VFSLRKKNVSPGLSAMDDHMKSGTGTDLFGQADCVVKHVLEGHDRGVNWASFHPSMPLIVSGADDRQIKLWRMNDSKAWEVDTCRGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTAKRTCLHTFRREHDRFWIVAAHPTLNLFAAGHDSGMVVFKLERERPAHALHGNLLYYVKDKYLRKLDFTTQKDKAVLQLRGGSRSLVYSMSYNPAENAVVLVTRSSNLENSVYDLYTIPKDSDGQTPDAPEGKRSSGVTAIWVARNRIAVLDRSHTLIIKNMKNEVTKKVQTPNCDEIFYAGTGMLLLRDNDSVTLFDVQQKRNLGNVKIPKCRYVIWSPDMTTVALLSKHNITICNRKLQSLCSIHENTRVKSGTWDDTGVFIYTTSNHIKYAITNGDHGIIRTLNLPVYLTRIKGDKVFLLDRECKPCTMTIDTTEYRFKLALINRKYDEVLHMVRNAKLVGQSIIGYLQKKGYPEVALHFVKDEKTRFALALECMDIEVALEAAKALDDKDCWDKLSESALMLGNHQVVEMCYQRTKNFDKLSFLYLITGNLEKLRKMMKIAEIRKDHSGHFQNALYLGDVPERVKILKNCGQTSLAYLTAKTHGMDEEAEDIKSGVDPDT-PLPEPTGNGVPIVPPQPKSQMEENWPLLTVSKGFFEGIRAVRSGGGAKAAGGTGALAMEDTDMDEGAGAGWGDD---DLGLDGDEEAVGGEDDFKSADGEEGPGEGDGGWDVDDGDLELPAELDGGTGSNVNTGATGDEDEGYFAPPTKGQSPAQNWASNSALPVDHIVAGSFESACRLLHDQVGVVNFEPYKSFFMTDFARGRTSFVALPALPALHGYPQSNWKEAGPKNGLPAVGLKLNHLVQRLQTCYQLTTAGKFSDAITKFRNILLSIPLLVVETKQDEAEAVQLREICMNYLVGLTMETKRKEMPKSSLEEQIRVCEMAAYFSHCHLQPVHQILTLRTACNLFFKLKNFKTAGSFARRLLELGPKPEVAQQTRKILQACDKNPTDEHKLAYDEFNPFDIDAVEYSPIYRGAEKVECPFCSAKYSPQAANTVCAVCTVGQVAKSTQGLKI 1081 + LRKKN+SPG A++ ++ TG DLFG D VVKHVLEGHDRGVNWA+FHP+MPLIVSGADDRQ+K+WRMN+SKAWEVDTCRGHYNNVS +FHPRQ+LI+SNSEDKSIRVWD +KRT + TFRR+HDRFW++AAHP LNLFAAGHD GM+VFKLERERPA+A+HGN+L+YVKD++LR+LDF + KD AV+QLR GS+ V++MSYNPAENAV+L TR+SNLENS YDLYTIPKD+D Q PDAPEGKRSSG+TA+WVARNR AVLDR H+L+IKN+KNE+TKK+Q PNCDEIFYAGTG LLLRD DS+TLFDVQQKR L +VKI K +YVIWS DM+ VALL+KH I ICNRKL +LC+IHEN RVKSG WD++GVFIYTTSNHIKYA+T GDHGIIRTL+LP+Y+TR+KG+ V+ LDREC+P +TID TE++FKLALINRKYDEVLHMVRNAKLVGQSII YLQKKGYPEVALHFVKDEKTRF+LALEC +IE+ALEAAKALDDK+CW+KL E AL+ GNHQ+VEMCYQRTKNFDKLSFLYLITGNLEKLRKMMKIAEIRKD SGH+QNALYLGDV ERV+ILKNCGQ SLAYLTA THG+DEEAE +K DP+ +P+ N + PP P ++ NWPLLTVSKGFFEG A + GGA AA D D+D GWG+D L DG EA G D G+E EG GGWDV++ DLELP ELD + +G G ++G+F PPTKG SPAQ W +NS LPVDHI+AGSFE+A RLLHDQVGV+ F PYK F+ FARGRT++ ALP LP+++ YP NWK+AG KNG+PAVGLKLN L+QRLQ CYQLTT GKF +A+ KFR+ILLS+PLLVV+ KQ+ AEA QL IC Y+VGL+ME +RK++PK +L++Q R+CEMAAYF+H +LQPVH IL LRTA NLFFKLKNFKTA +FARRLLELGPKPEVAQQTRKIL AC+KNPTD ++L+YD NPFDI A Y PIYRG +CP A YSP+ +C V TV ++ K GL+I Sbjct: 164 ISGLRKKNLSPG--AVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAHPNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLHYVKDRFLRQLDFNSSKDVAVMQLRSGSKFPVFNMSYNPAENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVWVARNRFAVLDRMHSLLIKNLKNEITKKIQVPNCDEIFYAGTGNLLLRDADSITLFDVQQKRTLASVKISKVKYVIWSADMSHVALLAKHAIVICNRKLDALCNIHENIRVKSGAWDESGVFIYTTSNHIKYAVTTGDHGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLTIDPTEFKFKLALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEIALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDKLSFLYLITGNLEKLRKMMKIAEIRKDMSGHYQNALYLGDVSERVRILKNCGQKSLAYLTAATHGLDEEAESLKETFDPEKETIPDIDPNAKLLQPPAPIMPLDTNWPLLTVSKGFFEGSIASKGKGGALAA---------DIDIDTVGAEGWGEDAELQLDEDGFVEATEGLGDDALGKGQE---EG-GGWDVEE-DLELPPELD------IPSGTAGGAEDGFFVPPTKGTSPAQIWCNNSQLPVDHILAGSFETAMRLLHDQVGVIQFGPYKQLFLQTFARGRTAYQALPCLPSMYSYPNRNWKDAGLKNGVPAVGLKLNDLIQRLQLCYQLTTVGKFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLITICREYIVGLSMEIERKKLPKETLDQQKRICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFKTAATFARRLLELGPKPEVAQQTRKILSACEKNPTDAYQLSYDMHNPFDICAASYRPIYRGKPVEKCPLSGACYSPEFKGQICRVTTVTEIGKDVIGLRI 1218 HSP 2 Score: 66.6254 bits (161), Expect = 3.462e-7 Identity = 35/115 (30.43%), Postives = 54/115 (46.96%), Query Frame = 0 Query: 42 CVVKHVLEGHDRGVNWASFHPSMPLIVSGADDRQIKLWRMNDSKAWEVDTCRGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTAKRTCLHTFRREHDRFWIVAAHPTLNLFAAG 156 C + + HD V FH PL VSG DD +IK+W + + T GH + + + FH I+S S+D++IRVW+ RTC+ + HP+ +L + Sbjct: 41 CTLIDKFDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRC--LFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSA 153 The following BLAST results are available for this feature:
BLAST of coatomer subunit alpha isoform 11 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 15
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BLAST of coatomer subunit alpha isoform 11 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of coatomer subunit alpha isoform 11 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
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The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold52_size450388:293855..300761- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold52_size450388-snap-gene-3.20 ID=maker-scaffold52_size450388-snap-gene-3.20|Name=coatomer subunit alpha isoform 11|organism=Tigriopus kingsejongensis|type=gene|length=6907bp|location=Sequence derived from alignment at scaffold52_size450388:293855..300761- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'coatomer subunit alpha isoform 11' has the following synonyms
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