coatomer subunit alpha isoform 11, maker-scaffold52_size450388-snap-gene-3.20 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of coatomer subunit alpha isoform 11 vs. L. salmonis genes
Match: EMLSAG00000004199 (supercontig:LSalAtl2s:LSalAtl2s221:488387:561813:1 gene:EMLSAG00000004199 transcript:EMLSAT00000004199 description:"maker-LSalAtl2s221-augustus-gene-5.19") HSP 1 Score: 1637.08 bits (4238), Expect = 0.000e+0 Identity = 794/1100 (72.18%), Postives = 905/1100 (82.27%), Query Frame = 0 Query: 12 LRKKNVSPGLSAMDDHMKS----GTGTDLFGQADCVVKHVLEGHDRGVNWASFHPSMPLIVSGADDRQIKLWRMNDSK----------------AWEVDTCRGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTAKRTCLHTFRREHDRFWIVAAHPTLNLFAAGHDSGMVVFKLERERPAHALHGNLLYYVKDKYLRKLDFTTQKDKAVLQLRGGSRSLVYSMSYNPAENAVVLVTRSSNLENSVYDLYTIPKDSDGQTPDAPEGKRSSGVTAIWVARNRIAVLDRSHTLIIKNMKNEVTKKVQTPNCDEIFYAGTGMLLLRDNDSVTLFDVQQKRNLGNVKIPKCRYVIWSPDMTTVALLSKHNITICNRKLQSLCSIHENTRVKSGTWDDTGVFIYTTSNHIKYAITNGDHGIIRTLNLPVYLTRIKGDKVFLLDRECKPCTMTIDTTEYRFKLALINRKYDEVLHMVRNAKLVGQSIIGYLQKKGYPEVALHFVKDEKTRFALALECMDIEVALEAAKALDDKDCWDKLSESALMLGNHQVVEMCYQRTKNFDKLSFLYLITGNLEKLRKMMKIAEIRKDHSGHFQNALYLGDVPERVKILKNCGQTSLAYLTAKTHGMDEEAEDIKSGVDPDTPLPEPTGNGVPIVPPQPKSQMEENWPLLTVSKGFFEGIRAVRS---GGGAKAAGGTGALAMEDTD---MDEGAGAGWGDDDLGLDGDEEAVGGEDDFKSADGEEGPGEGDGGWDVDDGDLELPAELDGGTGSNVNTGATGDEDEGYFAPPTKGQSPAQNWASNSALPVDHIVAGSFESACRLLHDQVGVVNFEPYKSFFMTDFARGRTSFVALPALPALHGYPQSNWKEAGPKNGLPAVGLKLNHLVQRLQTCYQLTTAGKFSDAITKFRNILLSIPLLVVETKQDEAEAVQLREICMNYLVGLTMETKRKEMPKSSLEEQIRVCEMAAYFSHCHLQPVHQILTLRTACNLFFKLKNFKTAGSFARRLLELGPKPEVAQQTRKILQACDKNPTDEHKLAYDEFNPFDIDAVEYSPIYRGAEKVECPFCSAKYSPQAANTVCAVCTVGQVAKSTQGLKIRRKI 1085 LRKKNV+ G + +KS TDLFG A CVVKHV GHDRGVNWASFHP+MPLIVSGADDRQIKLWRMN+SK AWEVDTCRGHYNNVS V+FHPRQDLI+SNSED++IRVWDTAKRTC++TFRREHDRFW++++HPTLNLFAAGHDSGMVVFKLERERPA+ALHGN+LYYVK++YLRKLDFTT KDK V+QLRGG+RS VYS+SYN AE+AV+ TR+S LENS+YDLY+IPKD D PD PEGKRS G+TA+WVARNR AVLDRSH+LIIKN+KNE+TKK+QTPNC EIF AGTGMLLLRD++ VTLFDVQQKRN+G+VKIPKCRYVIWS DM+TVALLSKH I IC++KL+ LC+I+ENTRVKS TWDD+GV IYTTSNHIKYAITNGDHGIIRTL+LP+YLTRIKG +VF LDRECKP + ID TEY+FKLALINRKYDEVLHMVRNAKLVGQSIIGYLQKKGYPEVALHFVKDEKTRFALALEC DI+ A+EAAKALDDK+CW+ L E+ALM GN QVVE+CYQRTKNFDKLSFLYLITGNLEKLRKMMKIAEIRKD S HFQ ALYLGDV ERVK+LKNC Q LAYLTAKTHG++EEAE+IK+ + DT LPEP + + P +P + NWP LTVSKGFFEGI+AVRS GGG G G LAME+ + +DEGA WG DDLGL+ D+ E++FK A + E D GWDVDD DLELPA+LD V DEGYF PPTKG++P Q W +NS LPVDHIVAG FESA RLLHDQVGVVNFEPY+S FM +F+R RT F ALP LP+L+GYPQSNW++ K+GLPAVG+K+ LV RLQTCYQ TT+GKF DA+ K R+I+ +IPLLVVETK DEAEA ++R I NYLVGL ME+ RKE+PK SLEEQ R+CEMAAYF+HC+LQP+HQILTLRTACNLFFKLKNFKT+GSFARRLLELGPKPEVA QTRKILQACDKNP DEHK+ YDEFNPFDI ++PIYRG K +CPFC AK+ P+ N +C +C GQ+ KS QGLKIRRKI Sbjct: 167 LRKKNVALGPDDVHHSLKSTGSAANNTDLFGVAXCVVKHVXXGHDRGVNWASFHPTMPLIVSGADDRQIKLWRMNESKVDLRLGGKHLGIGTVGAWEVDTCRGHYNNVSCVLFHPRQDLIISNSEDRTIRVWDTAKRTCINTFRREHDRFWVISSHPTLNLFAAGHDSGMVVFKLERERPAYALHGNILYYVKERYLRKLDFTTSKDKPVMQLRGGTRSPVYSLSYNQAEDAVLCCTRNSTLENSIYDLYSIPKDFDSSNPDTPEGKRSPGLTAVWVARNRFAVLDRSHSLIIKNLKNELTKKIQTPNCSEIFPAGTGMLLLRDSEFVTLFDVQQKRNMGSVKIPKCRYVIWSNDMSTVALLSKHVILICDKKLELLCTINENTRVKSATWDDSGVLIYTTSNHIKYAITNGDHGIIRTLDLPIYLTRIKGSQVFCLDRECKPRILNIDPTEYKFKLALINRKYDEVLHMVRNAKLVGQSIIGYLQKKGYPEVALHFVKDEKTRFALALECSDIDAAMEAAKALDDKECWESLGEAALMEGNIQVVEVCYQRTKNFDKLSFLYLITGNLEKLRKMMKIAEIRKDTSAHFQTALYLGDVRERVKVLKNCDQKILAYLTAKTHGLEEEAEEIKASLPEDTKLPEPNPDAKLLQPCRPAMPDDSNWPRLTVSKGFFEGIKAVRSSGVGGGVVNKAGVGKLAMEEEEEVPLDEGA---WG-DDLGLEEDD-----ENEFKDAVEDGNKSENDAGWDVDDDDLELPADLDPSPSKVV-------VDEGYFVPPTKGKNPTQLWLNNSQLPVDHIVAGCFESAFRLLHDQVGVVNFEPYRSNFMANFSRSRTWFQALPGLPSLNGYPQSNWRDGSSKSGLPAVGVKMTDLVSRLQTCYQFTTSGKFGDAVDKLRSIVYTIPLLVVETKPDEAEAQEMRTIVSNYLVGLIMESMRKELPKGSLEEQKRLCEMAAYFTHCNLQPIHQILTLRTACNLFFKLKNFKTSGSFARRLLELGPKPEVASQTRKILQACDKNPVDEHKVEYDEFNPFDICGRSFTPIYRGQAKEDCPFCLAKFKPEFKNELCNICNAGQIGKSVQGLKIRRKI 1250 HSP 2 Score: 58.151 bits (139), Expect = 1.636e-8 Identity = 30/79 (37.97%), Postives = 42/79 (53.16%), Query Frame = 0 Query: 48 LEGHDRGVNWASFHPSMPLIVSGADDRQIKLWRMNDSKAWEVDTCRGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTA 126 L GH + F P ++S +DD+ I++W V T HY V S FHP +DL+VS S D+S+RVWD + Sbjct: 89 LLGHLDYIRXTFFXHEYPXVLSASDDQTIRIWNWQSRSCVSVLTGHNHY--VMSASFHPSEDLLVSASLDQSVRVWDIS 165 HSP 3 Score: 52.7582 bits (125), Expect = 6.342e-7 Identity = 33/141 (23.40%), Postives = 61/141 (43.26%), Query Frame = 0 Query: 42 CVVKHVLEGHDRGVNWASFHPSMPLIVSGADDRQIKLWRMNDSKAWEVDTCR----GHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTAKRTCLHTFRREHDRFWIVAAHPTLNLF-AAGHDSGMVVFKLERERPAHALHG 177 C + + H+ H PL VSG DD +IK+W +++ C GH + + F ++S S+D++IR+W+ R+C+ + + HP+ +L +A D + V+ + R + G Sbjct: 41 CXLLEKFDEHEGPXXGIXXHKXQPLFVSGGDDYKIKVWN------YKLKRCLFQLLGHLDYIRXTFFXHEYPXVLSASDDQTIRIWNWQSRSCVSVLTGHNHYVMSASFHPSEDLLVSASLDQSVRVWDISGLRKKNVALG 175
BLAST of coatomer subunit alpha isoform 11 vs. L. salmonis genes
Match: EMLSAG00000000903 (supercontig:LSalAtl2s:LSalAtl2s1157:9447:26512:1 gene:EMLSAG00000000903 transcript:EMLSAT00000000903 description:"maker-LSalAtl2s1157-augustus-gene-0.18") HSP 1 Score: 118.242 bits (295), Expect = 3.585e-27 Identity = 142/624 (22.76%), Postives = 266/624 (42.63%), Query Frame = 0 Query: 48 LEGHDRGVNWASFHPS--MPLIVSGADDRQIKLWRMNDSKAWEVDTCRGHYNNVSS---------------------VIFHPRQDLIVSNSEDKSIRVWDTAKRTCLHTFRREHDRFWIVAAHPTLNLFAAGHDSGMVVFKLERERPAHALHGN-LLYYVKDKYLRKLDFTTQKDKAVLQLRGGSRSLVYSMSYNPAENAVVLVTRSSNLENSV------YDLYTIPKDSDGQTPDAPEGKRSSGVTAIWVAR-NRIAVLDRSHTL-IIKNMKNEVTKKVQTPNCDEIFYAGTGMLLLRDNDSVTLFDVQQKRNLGNVKIPKCRYVIWSPDMTTVALLSKHNITICNRKLQSLCSIHENTR--------------------VKSGTWDDTGVFIYTTS-NHIKYAITNGDHGIIRTLNLPVY-LTRIKGD-KVFLLDRECKPCTMTIDTTEYRFKLALINRKY---DEVLHMV-RNAKLVGQSIIGYLQKKGYPEVALHFVKDEKTRFALALECMDIEVALEAAKALDDKDCWDKLSESALMLGNHQVVEMCYQRTKNFDKLSFLYLITGNLEKLRKMMKIAEIRKDHSGHFQNALYLGDVPERVKILKNCGQTSLAYLTAKTH 612 LEGHD+GVN ++ + P ++SGADDR +K+W + V T GH N++S V FHP +I++ SED ++R+W + +T +R W +++ N + G+D G ++ KL RE PA ++ + + + K L++ + T D + L+ G + E +T +SN V Y +YT + A E +W A + A+ + S TL + KN K + + K + E Y G ML ++ + +D + + ++ + R V WS + VAL++ I + + + E + V++G W FIYT S N + Y + G+ I L+ +Y L I D K++L D+E + + + ++ A++ R + D+VL ++ R+ ++ + +L+K+G+ + AL D + +F LA+ D++ A + W +L+E + + + + C + K+F L L GN + + A + F ++ +G++ + IL + + A ++T+ Sbjct: 181 LEGHDKGVNCLDYYHAGDKPYLISGADDRSVKIWDYQNKNC--VQTLEGHAQNIASGKADTTCFLFSFIPKHFFHSKVCFHPELPIILTGSEDGTVRIWHASTYRLENTLNYGLERVWSISSLKGSNNVSIGYDEGSILVKLGREEPAMSMDSSGKIVWAKHSELQQGNLKTLGD---VDLKDGETLPISVKDMGSCEIYPQTITHNSNGRFVVVCGDGEYIIYTAMALRNKSFGSAQE--------FVWAAESSEYAIRENSSTLKVFKNFKEKQSLKPEFG--IESIYGGC-MLGVKSPSGLAFYDWETLELIRRIE-TQPRSVCWSDNGELVALITDECYFILRYQKEIVAYARETKQNVSDDGIEEAFEVLSENPECVRTGVWIG-DCFIYTNSLNRLNYYV-GGEIVTISHLDRTMYILGYIPSDNKLYLGDKELHVVSFQLLLSVLEYQTAVMRRDFDTADKVLPVIPRDQRI---RVAHFLEKQGFKKQALVVTSDLEHKFELAICLGDLKTAQSLVIENPGEQKWKQLAELXIANADFDLAQSCLKEAKDFGGLLLLATSLGNNLVINYLSNSAAQLGRKNISFISSFLMGNLENCLDILISTNRLPEAAFFSRTY 782 HSP 2 Score: 53.1434 bits (126), Expect = 3.967e-7 Identity = 32/95 (33.68%), Postives = 50/95 (52.63%), Query Frame = 0 Query: 48 LEGHDRGVNWASFHPSMPLIVSGADDRQIKLWRMNDSKAWEVDTC-RGHYNNVSSVIFHPR-QDLIVSNSEDKSIRVWDTAKRTCLHTFRREHDR 140 LE H + + HPS PL++S +DD IKLW N KAW + GH + + V+ +P+ + S S D++I+VW +C + HD+ Sbjct: 95 LEAHSDYLRSLAVHPSEPLVLSSSDDMLIKLW--NWDKAWACEQVFEGHTHYIMQVVINPKDNNXFASASLDRTIKVWHLGA-SCPNFTLEGHDK 186
BLAST of coatomer subunit alpha isoform 11 vs. L. salmonis genes
Match: EMLSAG00000006041 (supercontig:LSalAtl2s:LSalAtl2s327:367648:370815:1 gene:EMLSAG00000006041 transcript:EMLSAT00000006041 description:"maker-LSalAtl2s327-augustus-gene-3.42") HSP 1 Score: 68.5514 bits (166), Expect = 1.632e-12 Identity = 33/103 (32.04%), Postives = 55/103 (53.40%), Query Frame = 0 Query: 46 HVLEGHDRGVNWASFHPSMPLIVSGADDRQIKLWRMNDSKAWEVDTCRGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTAKRTCLHTFRREHDRFWIVAAHP 148 H LEGH + +F +++G+DD +KL+ ++ + T GH + V SV F P + VS S D+S++VW++ + C+HTF D+ W + P Sbjct: 187 HALEGHALPIRSLAFSKDSKRLLTGSDDGHMKLYEVSHGSL--IGTLSGHTSWVLSVQFSPDNEXFVSGSSDRSVKVWESTTKQCVHTFTDHSDQVWAASYSP 287
BLAST of coatomer subunit alpha isoform 11 vs. L. salmonis genes
Match: EMLSAG00000001111 (supercontig:LSalAtl2s:LSalAtl2s1186:117586:119588:-1 gene:EMLSAG00000001111 transcript:EMLSAT00000001111 description:"maker-LSalAtl2s1186-snap-gene-1.40") HSP 1 Score: 67.0106 bits (162), Expect = 9.658e-12 Identity = 33/104 (31.73%), Postives = 57/104 (54.81%), Query Frame = 0 Query: 36 LFGQADCVVKHVLEGHDRGVNWASFHPSMPLIVSGADDRQIKLWRMNDSKAWEVDTCRGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTAKRTCLHTFRREHD 139 ++G D + + GH G++ ++ L+VS +DD+ +K+W ++ K + T +GH N V F+P+ +L+VS S D+S+R+WD CL T D Sbjct: 56 VWGSYDGKFEKTISGHKLGISDVAWSSDSRLLVSASDDKTLKIWELSSGKC--LKTLKGHSNYVFCCNFNPQSNLVVSGSFDESVRIWDVRTGKCLKTLPAHSD 157 HSP 2 Score: 60.8474 bits (146), Expect = 9.846e-10 Identity = 39/137 (28.47%), Postives = 67/137 (48.91%), Query Frame = 0 Query: 44 VKHVLEGHDRGVNWASFHPSMPLIVSGADDRQIKLWRMNDSKAWEVDTCRGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTAKRTCLHTFRREHDRFWIVAAHPTLNLFAAG-HDSGMVVF-----KLERERPAHA 174 +K L GH +GV+ F P+ + S + D+ IK+W D K T GH +S V + L+VS S+DK++++W+ + CL T + + + +P NL +G D + ++ K + PAH+ Sbjct: 22 LKFTLAGHTKGVSAVKFSPNGEWLASSSADKLIKVWGSYDGKF--EKTISGHKLGISDVAWSSDSRLLVSASDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLVVSGSFDESVRIWDVRTGKCLKTLPAHS 156 HSP 3 Score: 58.5362 bits (140), Expect = 5.317e-9 Identity = 33/88 (37.50%), Postives = 48/88 (54.55%), Query Frame = 0 Query: 47 VLEGHDRGVNWASFHPSMPLIVSGADDRQIKLWRMNDSKAWEVDTCRGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTAKRTCLHTF 134 L+GH V +F+P L+VSG+ D +++W + K + T H + VS+V F+ LIVS+S D R+WDTA CL T Sbjct: 109 TLKGHSNYVFCCNFNPQSNLVVSGSFDESVRIWDVRTGKC--LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGXCRIWDTASGQCLKTL 194
BLAST of coatomer subunit alpha isoform 11 vs. L. salmonis genes
Match: EMLSAG00000003976 (supercontig:LSalAtl2s:LSalAtl2s213:19395:20797:-1 gene:EMLSAG00000003976 transcript:EMLSAT00000003976 description:"augustus_masked-LSalAtl2s213-processed-gene-0.0") HSP 1 Score: 59.6918 bits (143), Expect = 1.838e-9 Identity = 36/89 (40.45%), Postives = 52/89 (58.43%), Query Frame = 0 Query: 47 VLEGHDRGVNWASFHPSMPLIVSGADDRQIKLWRMNDSKAWE-VDTCRGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTAKRTCLHTF 134 L+GH V F L+VS + D IK+W D + +E + T +GH +NVSSV F P D I+S S DK+I++W+TA C+ T+ Sbjct: 117 TLKGHTDCVQDIGFDSPGKLLVSCSADMSIKIW---DFQTYECLKTLQGHDHNVSSVCFTPNGDYILSASRDKTIKMWETATGYCVRTY 202 HSP 2 Score: 53.1434 bits (126), Expect = 2.281e-7 Identity = 28/77 (36.36%), Postives = 44/77 (57.14%), Query Frame = 0 Query: 65 PLIVSGADDRQIKLWRMNDSKAWEVDTCRGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTAKRTCLHTFRREHDRF 141 P + SG+ D+ IK+W ++ + + T GH N V +++HP ++S S+DK+IRVWD A + C H H F Sbjct: 283 PFLASGSRDKTIKVWDVSTGQV--LFTYVGHDNWVRGLVWHPGGKYLLSASDDKTIRVWDIAHKRC-HKRLDSHSHF 356 HSP 3 Score: 51.6026 bits (122), Expect = 7.346e-7 Identity = 34/103 (33.01%), Postives = 52/103 (50.49%), Query Frame = 0 Query: 37 FGQADCVVKHVLEGHDRGVNWASFHPSMPLIVSGADDRQIKLWRMNDSKAWEVDTCRGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTAKRTCLHTFRREHD 139 F +C+ L+GHD V+ F P+ I+S + D+ IK+W + + V T GH V +V L+ S S D+S+RVW T+ + C R+HD Sbjct: 151 FQTYECL--KTLQGHDHNVSSVCFTPNGDYILSASRDKTIKMWET--ATGYCVRTYTGHREWVRNVRVLHDGSLLASCSNDQSVRVWSTSTKDCKDEL-RDHD 248
BLAST of coatomer subunit alpha isoform 11 vs. L. salmonis genes
Match: EMLSAG00000003570 (supercontig:LSalAtl2s:LSalAtl2s1961:13609:15847:-1 gene:EMLSAG00000003570 transcript:EMLSAT00000003570 description:"maker-LSalAtl2s1961-augustus-gene-0.14") HSP 1 Score: 59.6918 bits (143), Expect = 3.412e-9 Identity = 34/152 (22.37%), Postives = 74/152 (48.68%), Query Frame = 0 Query: 13 RKKNVSPGLSAMDDHMKSGTGTDLFGQADCVVKHVLEGHDRGVNWASFHPSMPLIVSGADDRQIKLWRMNDSKAWEVDTCRGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTAKRTCLHTFRREHDRFWIVAAHPTLN-LFAAGHDSGMVV 163 R++ S GL T T L + V + G+ + + +P+ L+VSG+ ++ ++ W S ++ +GH +NV ++I + L +S S D + ++W ++ C+ T+ R + W + A+ + +++AG D +++ Sbjct: 124 REQVASAGLDKSIYLWDINTLTALTASNNTVTTSSVSGNKDSIYSLAMNPAGTLLVSGSSEKTLRFWDPRTSA--KLAKLKGHTDNVKALILNREGTLCISGSSDGTFKLWSIGEQRCIATYYRHTEGVWALQANESFTRVYSAGRDKNIIL 273
BLAST of coatomer subunit alpha isoform 11 vs. L. salmonis genes
Match: EMLSAG00000001730 (supercontig:LSalAtl2s:LSalAtl2s129:321159:324031:-1 gene:EMLSAG00000001730 transcript:EMLSAT00000001730 description:"maker-LSalAtl2s129-snap-gene-3.7") HSP 1 Score: 56.225 bits (134), Expect = 4.014e-8 Identity = 56/206 (27.18%), Postives = 89/206 (43.20%), Query Frame = 0 Query: 47 VLEGHDRGVNWASFHPSMPLIVSGADDRQIKLWRMNDSKAWEVDTCRGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTAKRTCLHTFRREHDRFWIVAAHPTLNLFAAGHDSGMVVFKLERERPAHALHGNLLYYVKDKYLRKLDFTTQKDKAV----------LQLRGGSRSLVYSMSYNPAENAVVLVTRSSNLENSVYDLYT 242 VL+GHD V S IVSG+DD +K+W K + T GH V S R ++IVS S D+S++VW+ TC+HT + H + + DS + ++ +E H L G+L +Y +L + D V L G + VYS+ + + + +V+ S + V+D+ T Sbjct: 319 VLKGHDDHVI-TCLQFSNNRIVSGSDDNTLKVWSATTGKC--LRTLVGHTGGVWSXQM--RDNIIVSGSTDRSLKVWNADAGTCVHTLYGHTSTVRCMHLHEN-QVVSGSRDSTLRIWDIETGECLHILAGHLAAVRCVQYDGRLVVSGAYDYMVKVWNPEREECLHTLSGHTNRVYSLQF----DGIHVVSGSLDTSIRVWDVET 514
BLAST of coatomer subunit alpha isoform 11 vs. L. salmonis genes
Match: EMLSAG00000004113 (supercontig:LSalAtl2s:LSalAtl2s217:732115:733862:-1 gene:EMLSAG00000004113 transcript:EMLSAT00000004113 description:"maker-LSalAtl2s217-augustus-gene-7.26") HSP 1 Score: 55.4546 bits (132), Expect = 6.326e-8 Identity = 36/133 (27.07%), Postives = 59/133 (44.36%), Query Frame = 0 Query: 47 VLEGHDRGVNWASFHPSMPLIVSGADDRQIKLWRMNDSKAWEVDTCRGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTAKRTCLHTFRREHDRFWIVAAHPTLN-LFAAGHDSGMVVFKLERERPAHALHGN 178 V+ GH V +F P +GA DR IK+W + K + GH + V + RQ + S ED+ ++ WD + + + +A HPT++ L + G DS V+ + + H L G+ Sbjct: 191 VVSGHIGWVRCVAFEPGNEWFCTGAADRVIKIWDLASGKL--KLSLTGHVSTVRGLAVSARQPYLFSCGEDRQVKXWDLEYNKVIRHYHGHLSAVYDLALHPTIDVLVSCGRDSTARVWDMRTKVNIHTLTGH 321 HSP 2 Score: 53.1434 bits (126), Expect = 3.478e-7 Identity = 33/136 (24.26%), Postives = 59/136 (43.38%), Query Frame = 0 Query: 43 VVKHVLEGHDRGVNWASFHPSMPLIVSGADDRQIKLWRMNDSKAWEVDTCRGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTAKRTCLHTFRREHDRFWIVAAHPTLNLFAAGHDSGMVVFKLERERPAHALHGN 178 V++H GH V + HP++ ++VS D ++W M + T GH + V +V I++ S D +IR+WD A + V HPTL++ A+ + +++ + L G+ Sbjct: 272 VIRH-YHGHLSAVYDLALHPTIDVLVSCGRDSTARVWDMRTKV--NIHTLTGHTSTVGTVACQATDPQIITGSNDSTIRLWDLAAXKSMAXLXNHKKSVRAVVMHPTLDMMASASPDNIKEWRMPEGKFIQNLSGH 404
BLAST of coatomer subunit alpha isoform 11 vs. L. salmonis genes
Match: EMLSAG00000007279 (supercontig:LSalAtl2s:LSalAtl2s409:120750:123834:-1 gene:EMLSAG00000007279 transcript:EMLSAT00000007279 description:"augustus_masked-LSalAtl2s409-processed-gene-1.3") HSP 1 Score: 55.4546 bits (132), Expect = 6.785e-8 Identity = 36/128 (28.12%), Postives = 63/128 (49.22%), Query Frame = 0 Query: 43 VVKHVLEGHDRG-VNWASFHPSMPLIVSGADDRQIKLWRMNDSKAWEVDTCRGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTAKRTCLHTFRREHDRF----WIVAAHPTLNLFA-AGHDSGMVVF 164 V+K +G+D G + + HP++P+ V+ DDR I+ + K + H V+S+ ++S S D+S+R+W+ +TC+ +F + VA HP+ + A AG D+ VF Sbjct: 586 VIKLDTQGNDVGAITRVACHPTLPMTVTAHDDRHIRFFDNYTGKL--THSMVAHLEAVTSIAIDANGLYLISGSHDRSVRLWNIETKTCVQEITAHRKKFDESIFDVAFHPSSSYIASAGADALAKVF 711
BLAST of coatomer subunit alpha isoform 11 vs. L. salmonis genes
Match: EMLSAG00000003862 (supercontig:LSalAtl2s:LSalAtl2s209:625539:633615:-1 gene:EMLSAG00000003862 transcript:EMLSAT00000003862 description:"maker-LSalAtl2s209-snap-gene-5.15") HSP 1 Score: 55.0694 bits (131), Expect = 9.946e-8 Identity = 31/115 (26.96%), Postives = 46/115 (40.00%), Query Frame = 0 Query: 50 GHDRGVNWASFHPSMPLIVSGADDRQIKLWRMNDSKAWEVDTCRGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTAKRTCLHTFRREHDRFWIVAAHPTLNLFAAGHDSGMVVF 164 GH V F P S D+ + LW + + GH+++V + FHP + I S S D+S+RVWD C+ +A P A+G V+F Sbjct: 433 GHMYAVWHVKFSPQGYYFASAGHDKTVMLWSTEQHHSLRI--FAGHFSDVDCIAFHPNCNYIASGSSDRSVRVWDCVSGNCVRLMTGHKTAVSTLAFSPDGRFLASGGRDSRVLF 545 HSP 2 Score: 52.373 bits (124), Expect = 5.731e-7 Identity = 35/115 (30.43%), Postives = 48/115 (41.74%), Query Frame = 0 Query: 43 VVKHVLEGHDRGVNWASFHPSMPLIVSGADDRQIKLWRMNDSKAWEVDTC-RGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTAKRTCLHTFRREHDRFWIVAAHPTLNLFAAG 156 VV L GH V SF P +++S ++D I+LW C RGH V V F P+ S DK++ +W T + L F +A HP N A+G Sbjct: 392 VVSRTLYGHSGPVYGISFSPDKSMLLSCSEDGTIRLW-----------ICYRGHMYAVWHVKFSPQGYYFASAGHDKTVMLWSTEQHHSLRIFAGHFSDVDCIAFHPNCNYIASG 495
BLAST of coatomer subunit alpha isoform 11 vs. SwissProt
Match: gi|2506476|sp|P53622.2|COPA_YEAST (RecName: Full=Coatomer subunit alpha; AltName: Full=Alpha-coat protein; Short=Alpha-COP; AltName: Full=Retrieval from endoplasmic reticulum protein 1; AltName: Full=Secretory protein 22; AltName: Full=Suppressor of osmo-sensitivity 1) HSP 1 Score: 722.235 bits (1863), Expect = 0.000e+0 Identity = 417/1091 (38.22%), Postives = 613/1091 (56.19%), Query Frame = 0 Query: 12 LRKKNVSPGLSAMDDHMKSGTGTDLFGQADCVVKHVLEGHDRGVNWASFHPSMPLIVSGADDRQIKLWRMNDSKAWEVDTCRGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTAKRTCLHTFRREHDRFWIVAAHPTLNLFAAGHDSGMVVFKLERERPAHALHGNLLYYVK-DKYLRKLDFTTQKDK---AVLQLRGGSRSLVYSMSYNPAENAVVLVTRSSNLENSVYDLYTIPKDSDGQTPDAPEGKRSSGVTAIWVARNRIAVLDR-SHTLIIKNMKNEVTKKVQTP-NCDEIFYAGTGMLLLRDNDSVTLFDVQQKRNLGNVKIPKCRYVIWSPDMTTVALLSKHNITICNRKLQSLCSIHENTRVKSGTWDDTGVFIYTTSNHIKYAITNGDHGIIRTLNLPVYLTRIKGDKVFLLDRECKPCTMTIDTTEYRFKLALINRKYDEVLHMVRNAKLVGQSIIGYLQKKGYPEVALHFVKDEKTRFALALECMDIEVALEAAKALDDKDCWDKLSESALMLGNHQVVEMCYQRTKNFDKLSFLYLITGNLEKLRKMMKIAEIRKDHSGHFQNALYLGDVPERVKILKNCGQTSLAYLTAKTHGMDEEAEDI---KSGVDP-DTPLPEPTGNGVPIVPPQPKSQMEENWPLLTVSKGFFEGIRAVRSGGGAKAAGGTGALAMEDTDMDEGAGAGWGDDDLGLDGDEEAVGGEDDFKSADGEEGPGEGDGGWDVDDGDL----ELPAELDGGTGSNVNTGATGDEDEGYFAPPTKGQSPAQN-----WASNSALPVDHIVAGSFESACRLLHDQVGVVNFEPYKSFFMTDFARGRTSFVALPA-LPALHGYPQSNWKEAGPKNGLPAVGLKLNHLVQRLQTCYQLTTAGKFSDAITKFRNILLSIPLLVVETKQDEAEAVQLREICMNYLVGLTMETKRKEMPKSSLEEQIRVCEMAAYFSHCHLQPVHQILTLRTACNLFFKLKNFKTAGSFARRLLELGPKPEVAQQTRKILQACDKNPTDEHKLAYDEFNPFDIDAVEYSPIYRGAEKVECPFCSAKYSPQAANTVCAVCTVGQVAKSTQGLKIR 1082 LRK++ +PG S+ ++ M + DCVVK +LEGH RGVNWASFHP++PLIVSG+DDRQ+KLWRM+ +KAWEVDTCRGH NNV SVIFHP Q+LI+S EDK++RVWD KRT + F+RE+DRFW++AAHP +NLF A HDSG++VFKL+RERP +H N L++V +K ++ +F + A L+ G S+SYNP++++V++ N N + L +PK G + + +G A +V RNR V ++ + ++ +++++N+VT+ ++ I AG G +L+ V L+DVQQ + + + + +YV WS D VAL+SKH IT+ +KL+ + S+HE R+KS WD+TGV IY+T NHI+Y++ NGD GII+TL +Y+T+++G V+ L+RE + +TID TEYRFK AL+N+ + EVL +++++ LVGQ+II YLQK GYPE+AL FV+D RF LALE +++VAL+ AK L+D W++L + AL GN + EM YQ +FDKLSFLYL+TG++ KL KM IA+ R+D N Y ER I G LAY AK +G DE A ++ VD D LP+ + P +E+ WPL +FE KA G ++D +D+ A + ++E GE++F +E GE +G WD+ D DL ELP E++ G + SPAQ W NS LP + AG+F++A + L QVGVV EP K +F + RT + P LPA GY ++ LP V L+ + +++ Y+ K AI FR + I LL+V+ +DE A ++ E Y++GL++E +R+ + + + +R+ E+AAYF+ L P+H+ L+ A + FK KNF A FA L++ A+Q RKI D +D + +D + FDI A Y PIY V P +KY + + + + ++ GL+IR Sbjct: 169 LRKRHSAPGTSSFEEQMSAQQNLLDGSLGDCVVKFILEGHTRGVNWASFHPTLPLIVSGSDDRQVKLWRMSATKAWEVDTCRGHTNNVDSVIFHPHQNLIISVGEDKTLRVWDLDKRTPVKQFKRENDRFWLIAAHPHINLFGAAHDSGIMVFKLDRERPCSFIHQNQLFFVNAEKQIQSFNFQKRVASLPYASLKGIGQPWDAFRSISYNPSQHSVLV-----NEANGKFALVILPKQPVGAV-EPTSVTQDTGNFATFVGRNRFVVYNKNTESVEVRSLENKVTRNIKVEETVRTIVAAGPGSVLVIHPREVILYDVQQGKKVSQLAVKNVKYVSWSLDGQYVALMSKHTITLATKKLELINSMHETIRIKSAAWDETGVLIYSTLNHIRYSLLNGDRGIIKTLEKTLYITKVQGKLVYCLNREGEIEILTIDPTEYRFKKALVNKNFPEVLRLIKDSNLVGQNIISYLQKSGYPEIALQFVQDPHIRFDLALEYGNLDVALDEAKKLNDSSTWERLIQEALAQGNASLAEMIYQTQHSFDKLSFLYLVTGDVNKLSKMQNIAQTREDFGSMLLNTFYNNSTKERSSIFAEGGSLPLAYAVAKANG-DEAAASAFLEQAEVDEQDVTLPDQMDASNFVQRPVISKPLEK-WPLKEAELSYFE-----------KAVLGQ----IDDLTIDDETPA------VNTTQEQEEPLGEENF----NDEDIGEDEGAWDLGDEDLDVGEELPEEVEQGEIT----------------------SPAQEVETAIWIKNSKLPAVLVAAGAFDAAVQALSKQVGVVKLEPLKKYFTNIYEGCRTYIPSTPCELPAQLGYVRAYDDTVSEDQILPYVP-GLDVVNEKMNEGYKNFKLNKPDIAIECFREAIYRITLLMVDDAEDEKLAHKILETAREYILGLSIELERRSLKEGN---TVRMLELAAYFTKAKLSPIHRTNALQVAMSQHFKHKNFLQASYFAGEFLKIISSGPRAEQARKIKNKADSMASDAIPIDFDPYAKFDICAATYKPIYEDTPSVSDPLTGSKYVITEKDKIDRIAMISKIGAPASGLRIR 1200 HSP 2 Score: 71.2478 bits (173), Expect = 3.461e-11 Identity = 45/137 (32.85%), Postives = 70/137 (51.09%), Query Frame = 0 Query: 46 HVLEGHDRGVNWASFHPSMPLIVSGADDRQIKLWRMNDSKAWEVDTCRGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTAKR---TCLHTFRREHDRFWIVAA-HPTLNLF-AAGHDSGMVVFKLERERPAHALHG 177 H E H+ V FHP+ P+ VS DD IK+W ++ +K + T GH + V +V FH I+S S+D++IR+W+ R CL H+ F + A HPT +L +A D + ++ + R H+ G Sbjct: 47 HRFEDHEGPVRGLDFHPTQPIFVSAGDDYTIKVWSLDTNKC--LYTLTGHLDYVRTVFFHRELPWIISASDDQTIRIWNWQNRKEIACLTG----HNHFVMCAQFHPTDDLIVSASLDETIRIWDISGLRKRHSAPG 177
BLAST of coatomer subunit alpha isoform 11 vs. SwissProt
Match: gi|292495083|sp|Q20168.3|COPB2_CAEEL (RecName: Full=Probable coatomer subunit beta'; AltName: Full=Beta'-coat protein; Short=Beta'-COP) HSP 1 Score: 167.933 bits (424), Expect = 4.413e-41 Identity = 154/609 (25.29%), Postives = 271/609 (44.50%), Query Frame = 0 Query: 43 VVKHVLEGHDRGVNWASFHP--SMPLIVSGADDRQIKLWRMNDSKAWEVDTCRGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTAKRTCLHTFRREHDRFWIVAAHPTLNLFAAGHDSGMVVFKLERERPAHAL--HGNLLYYVKDKYLRKLDFTTQKDKAVLQLRGGSR----------SLVYSMSYNPAENAVVLVTRSSNLENSVYDLYTIPKDSDGQTPDAPEGKRSSGVTAIW-VARNRIAVLDRSHTL-IIKNMKNEVTKKVQTPNCDEIFYAGTGMLLLRDNDSVTLFDVQQKRNLGNVKIPKCRYVIWSPDMTTVALLSKHNITICNRKLQSLCSIHENTR----------------VKSGTWDDTGVFIYTTS-NHIKYAITNGDHGIIRTLNLPVYLT--RIKGDKVFLLDRECKPCTMTIDTTEYRFKLALINRKY---DEVLHMVRNAKLVGQSIIGYLQKKGYPEVALHFVKDEKTRFALALECMDIEVALEAAKALDDKDCWDKLSESALMLGNHQVVEMCYQRTKNFDKLSFLYLITGNLEKLRKMMKIAEIRKDHSGHFQNALYLGDVPERVKILKNCGQTSLAYLTAKTHG 613 V LEGH++GVN ++ P I+SGADD +K+W + V T GH NVSSV FHP LI++ SED ++R+W T +R W + A N A G+D G V KL RE PA ++ G +L + K +++ + T + ++ G R S +Y + + N +V + E VY + GQ G+ +W V N AV + + + I KN K+ K +++ E +G +L LR N+S+ FD + + ++I + + WS + VA+ + + +++ + E T VK+G W FI+TT+ N I Y + G+ I ++ P+YL K +V+ +D++ + + + ++ A++ R + D+VL + + + +L+K+G+ + AL +D +F L++ D++ A + A D ++ W LS +A + + C R ++F L L G+ L+K+ + + H+ F ++L LGD+ + L + G+ A A+TH Sbjct: 176 VPNFTLEGHEKGVNCVDYYHGGEKPYIISGADDHLVKIWDYQNKTC--VQTLDGHAQNVSSVCFHPELPLIITGSEDSTVRLWHANTYRLETTLNYGLERVWCIQAQKGANTIAIGYDEGSVTLKLGREEPAVSMDSSGKIL-WAKHSEIQQANLKTISTEESEAIQDGERLPLSVKDLGSSEIYPQTLAHSSNGRFVVA-CGDGEYIVYTAMALRNKDFGQ-----------GLEFVWAVDPNMFAVRESATNVKIKKNFKDH--KSIRSDMVLEGI-SGGPLLALRSNNSLCFFDWESAVLVRRIEI-TSKSIYWSDNGEMVAICGDDSFYVLKYSAEAVANATEVTEDGIEDAFEVIGEQAEAVKTGFWIG-DCFIFTTALNRINYYV-GGEIVTIAHVDRPLYLLGYMAKESRVYAVDKDLNVISYKLLLSVLEYQTAVMRRDFDTADKVLTTIPKEQRT--RVAHFLEKQGFKKQALAVSQDPDHKFDLSVALGDLKTAYDLALQSDSEEKWKALSNAATLKSELLLAGECLGRARDFGGLMLLATCAGSAPLLQKLADDSAAAESHNISFLSSLLLGDIDACLDKLISTGRLPEAAFLARTHA 761
BLAST of coatomer subunit alpha isoform 11 vs. SwissProt
Match: gi|18266783|sp|O55029.2|COPB2_MOUSE (RecName: Full=Coatomer subunit beta'; AltName: Full=Beta'-coat protein; Short=Beta'-COP; AltName: Full=p102) HSP 1 Score: 154.451 bits (389), Expect = 5.018e-37 Identity = 144/603 (23.88%), Postives = 266/603 (44.11%), Query Frame = 0 Query: 48 LEGHDRGVNWASFHPS--MPLIVSGADDRQIKLWRMNDSKAWEVDTCRGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTAKRTCLHTFRREHDRFWIVAAHPTLNLFAAGHDSGMVVFKLERERPAHAL--HGNLLYY----VKDKYLRKLDFTTQKDKAVLQL----RGGSRSLVYSMSYNPAENAVVLVTRSSNLENSVYDLYTIPKDSDGQTPDAPEGKRSSGVTAIWVARNRIAVLDRSHTLIIKNMKNEVTKKVQTPNCDEIFYAGTGMLLLRDNDSVTLFDVQQKRNLGNVKIPKCRYVIWSPDMTTVALLSKHNITI---CNRKLQSLCSIHENTR-----------------VKSGTWDDTGVFIYTTS-NHIKYAITNGDHGIIRTLNLPVYLTRI--KGDKVFLLDRECKPCTMTIDTTEYRFKLALINRKY---DEVLHMVRNAKLVGQSIIGYLQKKGYPEVALHFVKDEKTRFALALECMDIEVALEAAKALDDKDCWDKLSESALMLGNHQVVEMCYQRTKNFDKLSFLYLITGNLEKLRKMMKIAEIRKDHSGHFQNALYLGDVPERVKILKNCGQTSLAYLTAKTH 612 LEGH++GVN ++ P ++SGADDR +K+W + V T GH NVS FHP +I++ SED ++R+W ++ T +R W VA+ N A G+D G ++ KL RE PA ++ +G +++ V+ L+ + T KD L L G ++ +NP VV+ + E +Y + S G + SS R I+K KN KK P+ G +L +R + + +D + + ++I + +++ WS V + ++ + I + K+ + HE VK+G W FIYT+S N + Y + G+ I L+ +YL K ++++L D+E + ++ + ++ A++ R + D+VL + + + +L+K+G+ + AL D + RF LAL+ ++++A + A + + W +L+E A+ + + C +++ L L +GN + K+ + AE ++ F + G + +++L G+ A A+T+ Sbjct: 181 LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTC--VQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIVKLGREEPAMSMDANGKIIWAKHSEVQQANLKAMGDTEIKDGERLPLAVKDMGSCEIYPQTIQHNPNGRFVVVC---GDGEYIIYTAMALRNKSFGSAQEFAWAHDSSEYAI------------RESNSIVKIFKNFKEKKSFKPDFGAESIYGGFLLGVRSVNGLAFYDWENTELIRRIEI-QPKHIFWSDSGELVCIATEESFFILKYLSEKVLAAQETHEGVTEDGIEDAFEVLGEIQEIVKTGLWVG-DCFIYTSSVNRLNYYV-GGEIVTIAHLDRTMYLLGYIPKDNRLYLGDKELNIVSYSLLVSVLEYQTAVMRRDFSMADKVLPTIPKEQRT--RVAHFLEKQGFKQQALTVSTDPEHRFELALQLGELKIAYQLAVEAESEQKWKQLAELAISKCQFSLAQECLHHAQDYGGLLLLATASGNASMVNKLAEGAERDGKNNVAFMSYFLQGKLDACLELLIRTGRLPEAAFLARTY 761
BLAST of coatomer subunit alpha isoform 11 vs. SwissProt
Match: gi|3023522|sp|O35142.3|COPB2_RAT (RecName: Full=Coatomer subunit beta'; AltName: Full=Beta'-coat protein; Short=Beta'-COP; AltName: Full=p102) HSP 1 Score: 154.451 bits (389), Expect = 5.287e-37 Identity = 143/603 (23.71%), Postives = 266/603 (44.11%), Query Frame = 0 Query: 48 LEGHDRGVNWASFHPS--MPLIVSGADDRQIKLWRMNDSKAWEVDTCRGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTAKRTCLHTFRREHDRFWIVAAHPTLNLFAAGHDSGMVVFKLERERPAHAL--HGNLLYY----VKDKYLRKLDFTTQKDKAVLQL----RGGSRSLVYSMSYNPAENAVVLVTRSSNLENSVYDLYTIPKDSDGQTPDAPEGKRSSGVTAIWVARNRIAVLDRSHTLIIKNMKNEVTKKVQTPNCDEIFYAGTGMLLLRDNDSVTLFDVQQKRNLGNVKIPKCRYVIWSPDMTTVALLSKHNITI---CNRKLQSLCSIHENTR-----------------VKSGTWDDTGVFIYTTS-NHIKYAITNGDHGIIRTLNLPVYLTRI--KGDKVFLLDRECKPCTMTIDTTEYRFKLALINRKY---DEVLHMVRNAKLVGQSIIGYLQKKGYPEVALHFVKDEKTRFALALECMDIEVALEAAKALDDKDCWDKLSESALMLGNHQVVEMCYQRTKNFDKLSFLYLITGNLEKLRKMMKIAEIRKDHSGHFQNALYLGDVPERVKILKNCGQTSLAYLTAKTH 612 LEGH++GVN ++ P ++SGADDR +K+W + V T GH NVS FHP +I++ SED ++R+W ++ T +R W VA+ N A G+D G ++ KL RE PA ++ +G +++ V+ L+ + T KD L L G ++ +NP VV+ + E +Y + S G + SS R ++K KN KK P+ G +L +R + + +D + + ++I + +++ WS V + ++ + I + K+ + HE VK+G W FIYT+S N + Y + G+ I L+ +YL K ++++L D+E + ++ + ++ A++ R + D+VL + + + +L+K+G+ + AL D + RF LAL+ ++++A + A + + W +L+E A+ + + C +++ L L +GN + K+ + AE ++ F + G + +++L G+ A A+T+ Sbjct: 181 LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTC--VQTPEGHAQNVSCATFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIVKLGREEPAMSMDANGKIIWAKHSEVQQANLKAMGDTEIKDGERLPLAVKDMGSCEIYPQTIQHNPNGRFVVVC---GDGEYIIYTAMALRNKSFGSAQEFAWAHDSSEYAI------------RESNSVVKIFKNFKEKKSFKPDFGAESIYGGFLLGVRSVNGLAFYDWENTELIRRIEI-QPKHIFWSDSGELVCIATEESFFILKYLSEKVLAAQETHEGVTEDGIEDAFEVLGEIQEIVKTGLWVG-DCFIYTSSVNRLNYYV-GGEIVTIAHLDRTMYLLGYIPKDNRLYLGDKELNIVSYSLLVSVLEYQTAVMRRDFSMADKVLPTIPKEQRT--RVAHFLEKQGFKQQALTVSTDPEHRFELALQLGELKIAYQLAVEAESEQKWKQLAELAISKCQFSLAQECLHHAQDYGGLLLLATASGNASMVNKLAEGAERDGKNNVAFMSYFLQGKLDACLELLIRTGRLPEAAFLARTY 761
BLAST of coatomer subunit alpha isoform 11 vs. SwissProt
Match: gi|75041205|sp|Q5R664.1|COPB2_PONAB (RecName: Full=Coatomer subunit beta'; AltName: Full=Beta'-coat protein; Short=Beta'-COP) HSP 1 Score: 154.451 bits (389), Expect = 5.990e-37 Identity = 141/603 (23.38%), Postives = 265/603 (43.95%), Query Frame = 0 Query: 48 LEGHDRGVNWASFHPS--MPLIVSGADDRQIKLWRMNDSKAWEVDTCRGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTAKRTCLHTFRREHDRFWIVAAHPTLNLFAAGHDSGMVVFKLERERPAHALHGN-LLYYVKDKYLRKLDFTTQKDKAV-------LQLRGGSRSLVY--SMSYNPAENAVVLVTRSSNLENSVYDLYTIPKDSDGQTPDAPEGKRSSGVTAIWVARNRIAVLDRSHTLIIKNMKNEVTKKVQTPNCDEIFYAGTGMLLLRDNDSVTLFDVQQKRNLGNVKIPKCRYVIWSPDMTTVALLSKHNITI---CNRKLQSLCSIHENTR-----------------VKSGTWDDTGVFIYTTS-NHIKYAITNGDHGIIRTLNLPVYLTRI--KGDKVFLLDRECKPCTMTIDTTEYRFKLALINRKY---DEVLHMVRNAKLVGQSIIGYLQKKGYPEVALHFVKDEKTRFALALECMDIEVALEAAKALDDKDCWDKLSESALMLGNHQVVEMCYQRTKNFDKLSFLYLITGNLEKLRKMMKIAEIRKDHSGHFQNALYLGDVPERVKILKNCGQTSLAYLTAKTH 612 LEGH++GVN ++ P ++SGADDR +K+W + V T GH NVS FHP +I++ SED ++R+W ++ T +R W VA+ N A G+D G ++ KL RE PA ++ N + + K +++ + D + L ++ +Y ++ +NP VV+ + E +Y + S G + SS R I+K KN KK P+ G +L +R + + +D + ++I + +++ WS V + ++ + I + K+ ++ HE VK+G W FIYT+S N + Y + G+ I L+ +YL K ++++L D+E + ++ + ++ A++ R + D+VL + + + +L+K+G+ + AL D + RF LAL+ ++++A + A + + W +L+E A+ + + C +++ L L +GN + K+ + AE ++ F + G V +++L G+ A A+T+ Sbjct: 181 LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTC--VQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIVKLGREEPAMSMDANGKIIWAKHSEVQQANLKAMGDAEIKDGERLPLAVKDMGSCEIYPQTIQHNPNGRFVVVC---GDGEYIIYTAMALRNKSFGSAQEFAWAHDSSEYAI------------RESNSIVKIFKNFKEKKSFKPDFGAESIYGGFLLGVRSVNGLAFYDWDNTELIRRIEI-QPKHIFWSDSGELVCIATEESFFILKYLSEKVLAVQETHEGVTEDGIEDAFEVLGEIQEIVKTGLWVG-DCFIYTSSVNRLNYYV-GGEIVTIAHLDRTMYLLGYIPKDNRLYLGDKELNIVSYSLLVSVLEYQTAVMRRDFSMADKVLPTIPKEQRT--RVAHFLEKQGFKQQALTVSTDPEHRFELALQLGELKIAYQLAVEAESEQKWKQLAELAISKCQFGLAQECLHHAQDYGGLLLLATASGNANMVNKLAEGAERDGKNNVAFMSYFLQGKVDACLELLIRTGRLPEAAFLARTY 761
BLAST of coatomer subunit alpha isoform 11 vs. SwissProt
Match: gi|544076|sp|P35606.2|COPB2_HUMAN (RecName: Full=Coatomer subunit beta'; AltName: Full=Beta'-coat protein; Short=Beta'-COP; AltName: Full=p102) HSP 1 Score: 153.295 bits (386), Expect = 1.212e-36 Identity = 141/603 (23.38%), Postives = 264/603 (43.78%), Query Frame = 0 Query: 48 LEGHDRGVNWASFHPS--MPLIVSGADDRQIKLWRMNDSKAWEVDTCRGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTAKRTCLHTFRREHDRFWIVAAHPTLNLFAAGHDSGMVVFKLERERPAHALHGN-LLYYVKDKYLRKLDFTTQKDKAV-------LQLRGGSRSLVY--SMSYNPAENAVVLVTRSSNLENSVYDLYTIPKDSDGQTPDAPEGKRSSGVTAIWVARNRIAVLDRSHTLIIKNMKNEVTKKVQTPNCDEIFYAGTGMLLLRDNDSVTLFDVQQKRNLGNVKIPKCRYVIWSPDMTTVALLSKHNITI---CNRKLQSLCSIHENTR-----------------VKSGTWDDTGVFIYTTS-NHIKYAITNGDHGIIRTLNLPVYLTRI--KGDKVFLLDRECKPCTMTIDTTEYRFKLALINRKY---DEVLHMVRNAKLVGQSIIGYLQKKGYPEVALHFVKDEKTRFALALECMDIEVALEAAKALDDKDCWDKLSESALMLGNHQVVEMCYQRTKNFDKLSFLYLITGNLEKLRKMMKIAEIRKDHSGHFQNALYLGDVPERVKILKNCGQTSLAYLTAKTH 612 LEGH++GVN ++ P ++SGADDR +K+W + V T GH NVS FHP +I++ SED ++R+W ++ T +R W VA+ N A G+D G ++ KL RE PA ++ N + + K +++ + D + L ++ +Y ++ +NP VV+ + E +Y + S G + SS R I+K KN KK P+ G +L +R + + +D + ++I + +++ WS V + ++ + I + K+ + HE VK+G W FIYT+S N + Y + G+ I L+ +YL K ++++L D+E + ++ + ++ A++ R + D+VL + + + +L+K+G+ + AL D + RF LAL+ ++++A + A + + W +L+E A+ + + C +++ L L +GN + K+ + AE ++ F + G V +++L G+ A A+T+ Sbjct: 181 LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTC--VQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIVKLGREEPAMSMDANGKIIWAKHSEVQQANLKAMGDAEIKDGERLPLAVKDMGSCEIYPQTIQHNPNGRFVVVC---GDGEYIIYTAMALRNKSFGSAQEFAWAHDSSEYAI------------RESNSIVKIFKNFKEKKSFKPDFGAESIYGGFLLGVRSVNGLAFYDWDNTELIRRIEI-QPKHIFWSDSGELVCIATEESFFILKYLSEKVLAAQETHEGVTEDGIEDAFEVLGEIQEIVKTGLWVG-DCFIYTSSVNRLNYYV-GGEIVTIAHLDRTMYLLGYIPKDNRLYLGDKELNIISYSLLVSVLEYQTAVMRRDFSMADKVLPTIPKEQRT--RVAHFLEKQGFKQQALTVSTDPEHRFELALQLGELKIAYQLAVEAESEQKWKQLAELAISKCQFGLAQECLHHAQDYGGLLLLATASGNANMVNKLAEGAERDGKNNVAFMSYFLQGKVDACLELLIRTGRLPEAAFLARTY 761
BLAST of coatomer subunit alpha isoform 11 vs. SwissProt
Match: gi|187608885|sp|P35605.3|COPB2_BOVIN (RecName: Full=Coatomer subunit beta'; AltName: Full=Beta'-coat protein; Short=Beta'-COP; AltName: Full=p102) HSP 1 Score: 152.91 bits (385), Expect = 1.762e-36 Identity = 139/603 (23.05%), Postives = 265/603 (43.95%), Query Frame = 0 Query: 48 LEGHDRGVNWASFHPS--MPLIVSGADDRQIKLWRMNDSKAWEVDTCRGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTAKRTCLHTFRREHDRFWIVAAHPTLNLFAAGHDSGMVVFKLERERPAHALHGN-LLYYVKDKYLRKLDFTTQKDKAV-------LQLRGGSRSLVY--SMSYNPAENAVVLVTRSSNLENSVYDLYTIPKDSDGQTPDAPEGKRSSGVTAIWVARNRIAVLDRSHTLIIKNMKNEVTKKVQTPNCDEIFYAGTGMLLLRDNDSVTLFDVQQKRNLGNVKIPKCRYVIWSPDMTTVALLSKHNITI---CNRKLQSLCSIHENTR-----------------VKSGTWDDTGVFIYTTS-NHIKYAITNGDHGIIRTLNLPVYLTRI--KGDKVFLLDRECKPCTMTIDTTEYRFKLALINRKY---DEVLHMVRNAKLVGQSIIGYLQKKGYPEVALHFVKDEKTRFALALECMDIEVALEAAKALDDKDCWDKLSESALMLGNHQVVEMCYQRTKNFDKLSFLYLITGNLEKLRKMMKIAEIRKDHSGHFQNALYLGDVPERVKILKNCGQTSLAYLTAKTH 612 LEGH++GVN ++ P ++SGADDR +K+W + V T GH NVS FHP +I++ SED ++R+W ++ T +R W VA+ N A G+D G ++ KL RE PA ++ N + + K +++ + D + L ++ +Y ++ +NP VV+ + E +Y + S G + SS R ++K KN KK P+ G +L +R + + +D + + ++I + +++ WS V + ++ + I + K+ + HE VK+G W FIYT+S N + Y + G+ I L+ +YL K ++++L D+E + ++ + ++ A++ R + D+VL + + + +L+K+G+ + AL D + RF LAL+ ++++A + A + + W +L+E A+ + + C +++ L L +GN + K+ + AE ++ F + G + +++L G+ A A+T+ Sbjct: 181 LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTC--VQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIVKLGREEPAMSMDANGKIIWAKHSEVQQANLKAMGDAEIKDGERLPLAVKDMGSCEIYPQTIQHNPNGRFVVVC---GDGEYIIYTAMALRNKSFGSAQEFAWAHDSSEYAI------------RESNSVVKIFKNFKEKKSFKPDFGAESIYGGFLLGVRSVNGLAFYDWENTELIRRIEI-QPKHIFWSDSGELVCIATEESFFILKYLSEKVLAAQETHEGVTEDGIEDGFEVLGEIQEIVKTGLWVG-DCFIYTSSVNRLNYYV-GGEIVTIAHLDRTMYLLGYIPKDNRLYLGDKELNIVSYSLLVSVLEYQTAVMRRDFSMADKVLPTIPKEQRT--RVAHFLEKQGFKQQALTVSTDPEHRFELALQLGELKIAYQLAVEAESEQKWKQLAELAISKCQFGLAQECLHHAQDYGGLLLLATASGNASMVNKLAEGAERDGKNNVAFMSYFLQGKLDACLELLIRTGRLPEAAFLARTY 761
BLAST of coatomer subunit alpha isoform 11 vs. SwissProt
Match: gi|75075713|sp|Q4R4I8.1|COPB2_MACFA (RecName: Full=Coatomer subunit beta'; AltName: Full=Beta'-coat protein; Short=Beta'-COP) HSP 1 Score: 150.599 bits (379), Expect = 8.429e-36 Identity = 143/603 (23.71%), Postives = 263/603 (43.62%), Query Frame = 0 Query: 48 LEGHDRGVNWASFHPS--MPLIVSGADDRQIKLWRMNDSKAWEVDTCRGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTAKRTCLHTFRREHDRFWIVAAHPTLNLFAAGHDSGMVVFKLERERPAHAL--HGNLLYY----VKDKYLRKLDFTTQKDKAVLQL----RGGSRSLVYSMSYNPAENAVVLVTRSSNLENSVYDLYTIPKDSDGQTPDAPEGKRSSGVTAIWVARNRIAVLDRSHTLIIKNMKNEVTKKVQTPNCDEIFYAGTGMLLLRDNDSVTLFDVQQKRNLGNVKIPKCRYVIWSPDMTTVALLSKHNITI---CNRKLQSLCSIHENTR-----------------VKSGTWDDTGVFIYTTS-NHIKYAITNGDHGIIRTLNLPVYLTRI--KGDKVFLLDRECKPCTMTIDTTEYRFKLALINRKY---DEVLHMVRNAKLVGQSIIGYLQKKGYPEVALHFVKDEKTRFALALECMDIEVALEAAKALDDKDCWDKLSESALMLGNHQVVEMCYQRTKNFDKLSFLYLITGNLEKLRKMMKIAEIRKDHSGHFQNALYLGDVPERVKILKNCGQTSLAYLTAKTH 612 LEGH++GVN ++ P ++SGADDR +K+W + V T GH NVS FHP +I++ SED ++R+W ++ T +R W VA+ N A G D G ++ KL RE PA ++ +G +++ V+ L+ + KD L L G ++ +NP VV+ + E +Y + S G + SS R ++K KN KK P+ G +L +R + + +D + ++I + +++ WS V + ++ + I + K+ + HE VK+G W FIYT+S N + Y + G+ I L+ +YL K ++++L D+E + ++ + ++ A++ R + D+VL + + + +L+K+G+ + AL D + RF LAL+ ++++A + A + + W +L+E A+ + + C +++ L L +GN + K+ + AE ++ F + G V +++L G+ A A+T+ Sbjct: 181 LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTC--VQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGCDEGSIIVKLGREEPAMSMDANGKIIWAKHSEVQQANLKAMGNAEIKDGERLPLAVKDMGSCEIYPQTIQHNPNGRFVVVC---GDGEYIIYTAMALRNKSFGSAQEFAWAHDSSEYAI------------RESNSVVKIFKNFKEKKSFKPDFGAESIYGGFLLGVRSVNGLAFYDWDNTELIRRIEI-QPKHIFWSGSGELVCIATEESFFILKYLSEKVLAAQETHEGVTEDGIEDAFEVLGEIQEIVKTGLWVG-DCFIYTSSVNRLNYYV-GGEIVTIAHLDRTMYLLGYIPKDNRLYLGDKELNIVSYSLLVSVLEYQTAVMRRDFSMADKVLPTIPKEQRT--RVAHFLEKQGFKQQALTVSTDPEHRFELALQLGELKIAYQLAVEAESEQKWKQLAELAISKCQFGLAQECLHHAQDYGGLLLLATASGNANMVNKLAEGAERDGKNNVAFMSYFLQGKVDACLELLIRTGRLPEAAFLARTY 761
BLAST of coatomer subunit alpha isoform 11 vs. SwissProt
Match: gi|27923965|sp|O62621.2|COPB2_DROME (RecName: Full=Coatomer subunit beta'; AltName: Full=Beta'-coat protein; Short=Beta'-COP) HSP 1 Score: 145.976 bits (367), Expect = 2.540e-34 Identity = 136/608 (22.37%), Postives = 265/608 (43.59%), Query Frame = 0 Query: 48 LEGHDRGVNWASFHPS--MPLIVSGADDRQIKLWRMNDSKAWEVDTCRGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTAKRTCLHTFRREHDRFWIVAAHPTLNLFAAGHDSGMVVFKLERERPAHALH--GNLLYYVKDKYLRKLDFTTQKDKAVLQLRGGSRSLV------------YSMSYNPAENAVVLVTRSSNLENSVYDLYTIPKDSDGQTPDAPEGKRSSGVTAIW-VARNRIAVLDRSHTLIIKNMKNEVTKKVQTPNCDEIFYAGTGMLLLRDNDSVTLFDVQQKRNLGNVKIPKCRYVIWSPDMTTVALLSKHNITICNRKLQSLCSIHENTR--------------------VKSGTWDDTGVFIYTTS-NHIKYAITNGDHGIIRTLNLPVYLTRI--KGDKVFLLDRECKPCTMTIDTTEYRFKLALINRKY---DEVLHMVRNAKLVGQSIIGYLQKKGYPEVALHFVKDEKTRFALALECMDIEVALEAAKALDDKDCWDKLSESALMLGNHQVVEMCYQRTKNFDKLSFLYLITGNLEKLRKMMKIAEIRKDHSGHFQNALYLGDVPERVKILKNCGQTSLAYLTAKTH 612 LEGH++GVN ++ P ++SGADDR +K+W + V T GH N+S+V FHP ++++ SED ++R+W + +R W +++ N A G+D G ++ K+ RE PA ++ G+ + + K +++++ T D +++ G R V ++++NP VV+ + Y +YT + A E +W + N A+ + + T ++ +N +K TP G ++ + + +D + + + +++ + + V W+ + V L + + + + + E VK+G W FIYT S N I Y + G+ + L+ +YL K ++++L D+E + + + ++ A++ R + D VL + K + +L+K+G+ AL D +F LAL+ D+E+AL+ A+ ++ W +L++ A N +V+ C Q+ + L L +G+ + L + + H+ F +A DV ++IL + A A+T+ Sbjct: 181 LEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTC--VQTLEGHAQNISAVCFHPELPIVLTGSEDGTVRIWHSGTYRLETCLNYGFERVWTISSMRGTNNVALGYDEGSIIIKVGREEPAMSMDVVGSKIIWAKHSEMQQVNLKTIADGT--EIKDGERLPVATKDMGACEIYPQTIAHNPNGRFVVVCG------DGEYIIYTSMALRNKAFGSAQE--------FVWALESNEYAIRENNGT--VRLFRNFKERKSFTPEYGAESIYGGYYFGVKTSSGLAFYDWETLQLVRRIEV-QPKNVFWNESGSLVCLATDDSYFVLGVDTAQVANAVETKEGLEDDGVESAFNVLGEVSECVKTGLWVG-DCFIYTNSVNRINYYV-GGEIVTVSHLDRTMYLLGYVPKDNRIYLGDKELNVISFCLQLSVLEYQTAVMRRDFERADVVLPTI--PKEHRTRVAHFLEKQGFKSQALQVSTDADHKFDLALQIGDLEIALKLARESENSQKWSQLADVASSKNNMSLVKECMQKANDLSGLLLLSTASGDAQLLEVVGAAGSAQGHHNLAFLSAFLRSDVERCLEILIETNRLPEAAFFARTY 763
BLAST of coatomer subunit alpha isoform 11 vs. SwissProt
Match: gi|12229740|sp|O42937.2|COPB2_SCHPO (RecName: Full=Probable coatomer subunit beta'; AltName: Full=Beta'-coat protein; Short=Beta'-COP) HSP 1 Score: 145.206 bits (365), Expect = 3.079e-34 Identity = 152/628 (24.20%), Postives = 270/628 (42.99%), Query Frame = 0 Query: 37 FGQADCVVKHVLEGHDRGVNWASFHPS--MPLIVSGADDRQIKLWRMNDSKAWEVDTCRGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTAKRTCLHTFRREHDRFWIVAAHPTLNLFAAGHDSGMVVFKLERERPAHAL--HGNLLYYVKDKYLRKL-----DFTTQKDKAVLQLR----GGSRSLVYSMSYNPAENAVVLVTRSSNLENSVYDLYTIPKDSDGQTPDAPEGKRSSGVTAIWVARNRIAVLDRSHTLIIKNMKNEVTKKVQTPNCDEIFYAGTGMLLLRDNDSVTLFDVQQKRNLGNVKIPKCRYVIWSPDMTTVALLSKHNITICNRKLQSLCSIHE--------------------NTRVKSGTWDDTGVFIYTTS-NHIKYAITNGDHGIIRTLNLPVYLTRI-KGDKVFLLDRECKPCTMTIDTTEYRFKLALINRKYDEVLHMVRNAKL-VGQSII------------GYLQKKGYPEVALHFVKDEKTRFALALECMDIEVALEAAKALDDKDCWDKLSESALMLGNHQVVEMCYQRTKNFDKLSFLYLITGNLEKLRKMMKIAEIRKDHSGHFQNALYLGDVPERVKILKNCGQTSLAYLTAKTHGMDE 616 FG + V L+ HDRGVN+ +++P+ P +++ DD IK+W V GH NNVS FH + +I+S SED ++++W T + + ++ DR W +A + L G D+G++ F L R+ P+ + G +++ ++ + + + + D +++ L G + + ++P V+ N E VY + G+ D S+ V +R + DRS +I KN K E + + +CD+IF G +L + +D + +D + + + K + V W+ D V L + + + S E + V +G W FIYTT+ + Y I + + I + L I + D+++L DR+ ++ Y F LA+I E +V L Q ++ +L + GY E AL D RF LAL+ +++A + A+ LDD W L ++AL + + + C+++ K++ L LY T N E L+++ ++ + K ++ F + E V IL + + A L A T+ DE Sbjct: 171 FGSS--VANFTLQAHDRGVNYVNYYPAGDKPYLITAGDDNLIKVWDYQTKAC--VRILEGHTNNVSFAFFHSKFPIIISGSEDGTVKIWHTLSYSLIKSYNFSLDRAWCIAQNKDNGLVTVGFDNGLITFSLGRDEPSVTMDSSGKVVWSNYNEVMSAMIRPAKEQSDLTDGSLISLSVKELGTTELYPAVLKHSPNGR---FVSVCGNGEYIVYTALAWRNKAYGKALDFAWSADSN------VYGSRTS--DRS-IVIHKNFK-ESNRLDLSYSCDKIF--GGFLLGVVGSDFICFYDWDTGILVRKIDV-KPKGVYWNDDGRFVILACDDDFYLLGFNAEMFYSAVESGTADEEEGVADSFEALADVSESVVNGKW-VAETFIYTTTAARLNYLIGDQTYKIANVESSFYLLGYIPRDDRIYLTDRD-------MNVVSYSFNLAII-----EYQSLVLKGDLEAAQGLLEQISETDRPRLSDFLSRLGYKEAALELSGDSVQRFELALDAQRLDIASQIAQELDDPLKWRSLGDAALNAWDFVLAQECFEKGKDYGSLVLLYTATNNHEGLKELSQLTKSTKINNTAFICSWLTNQPAECVNILTSTQRYPEANLFAATYCPDE 765
BLAST of coatomer subunit alpha isoform 11 vs. nr
Match: gi|1325317003|ref|XP_023340232.1| (coatomer subunit alpha-like isoform X2 [Eurytemora affinis]) HSP 1 Score: 1610.89 bits (4170), Expect = 0.000e+0 Identity = 785/1078 (72.82%), Postives = 889/1078 (82.47%), Query Frame = 0 Query: 9 VFSLRKKNVSPGLSAMDDHMKSGTGTDLFGQADCVVKHVLEGHDRGVNWASFHPSMPLIVSGADDRQIKLWRMNDSKAWEVDTCRGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTAKRTCLHTFRREHDRFWIVAAHPTLNLFAAGHDSGMVVFKLERERPAHALHGNLLYYVKDKYLRKLDFTTQKDKAVLQLRGGSRSLVYSMSYNPAENAVVLVTRSSNLENSVYDLYTIPKDSDGQTPDAPEGKRSSGVTAIWVARNRIAVLDRSHTLIIKNMKNEVTKKVQTPNCDEIFYAGTGMLLLRDNDSVTLFDVQQKRNLGNVKIPKCRYVIWSPDMTTVALLSKHNITICNRKLQSLCSIHENTRVKSGTWDDTGVFIYTTSNHIKYAITNGDHGIIRTLNLPVYLTRIKGDKVFLLDRECKPCTMTIDTTEYRFKLALINRKYDEVLHMVRNAKLVGQSIIGYLQKKGYPEVALHFVKDEKTRFALALECMDIEVALEAAKALDDKDCWDKLSESALMLGNHQVVEMCYQRTKNFDKLSFLYLITGNLEKLRKMMKIAEIRKDHSGHFQNALYLGDVPERVKILKNCGQTSLAYLTAKTHGMDEEAEDIKSGVDPD-TPLPEPTGNGVPIVPPQPKSQMEENWPLLTVSKGFFEGIRAVRSGGGAKAAGGTGALAMEDTDMDEGAGAGWGDDDLGLDGDEEAVGGEDDFKSADGEEGPGEGDGGWDVDDGDLELPAELDGGTGSNVNTGATGDEDEGYFAPPTKGQSPAQNWASNSALPVDHIVAGSFESACRLLHDQVGVVNFEPYKSFFMTDFARGRTSFVALPALPALHGYPQSNWKEAGPKNGLPAVGLKLNHLVQRLQTCYQLTTAGKFSDAITKFRNILLSIPLLVVETKQDEAEAVQLREICMNYLVGLTMETKRKEMPKSSLEEQIRVCEMAAYFSHCHLQPVHQILTLRTACNLFFKLKNFKTAGSFARRLLELGPKPEVAQQTRKILQACDKNPTDEHKLAYDEFNPFDIDAVEYSPIYRGAEKVECPFCSAKYSPQAANTVCAVCTVGQVAKSTQGLKIRRKI 1085 + LRKK+V+PG ++DH+K+ TDLFGQAD VVKHVLEGHDRGVNWASFHP+MPLIVSGADDRQIKLWRMND+KAWEVDTCRGHYNNVS IFHPRQ+LI+SNSED+SIRVWD +KR CLHTFRREHDRFW++AAHPTLNLFAAGHD+GMVVFKLERERPAHA+ GN+LYYVK+KYLRKLDFTT +D AV+QLRGGSRS +YSMSYN AEN+V+L TR++N ENS YDLYTI +D G + A EGKRSSG+T+IWVARNR AVLD+SH+L+IKN+KNEVTKK+ PNCDEIFYAGTGMLLLRD D+VTLFDVQQKRNLGNVKIPKCRYV+WS DM+ VALLSKH +TIC RKL+ LCS+HENTRVKSGTWDD+GV IYTTSNHIKYAITNGDHGIIRTL+LPVYLTRIKG +VF LDRECKP + ID TEY+FKLALINRKY+EVLHMVRNAKLVGQSII YLQ+KGYPEVALHFVKDEKTRF LALEC +IE ALEAAK+LDDKDCW+KL E+AL+ GNHQVVEMCYQRTKNFDKLSFLYLITGNLEKL+KMMKIAEIRKD SGHFQNALYLGDV ERVK+L CGQ SL YLTA THG+ EEAE IK GVD + TPLP P + PP P +Q E+NWPLLTVS+GFF+ K+ G LA+ED EG + DLGLD D E +DDF+ D E G EGD GW D+ DLELPA+L+ A GD ++GYF PT+G P Q+W +NS+LP+DHI+AG+FESA RLLHDQVGVVNFE YK+ FMT ++R R S + P+++ PQSNWKEA PKNGLPAVGLKLN LV RLQ+ YQLTT+GKF +A KFR+ILLSIPLLVVE+KQDE EA+QLR+IC +YLVGLTME+ RKE PK +LE Q RVCEMAAYF+HC+LQPVHQILTLRTA NLFFKLKNFKTAGSFARRLLELGPKPEVAQQTRKILQACDKNP DEH+L YDE NPFD+ A + PIYRGAE P AKY PQ VC + V Q+ K T GLKIRRK+ Sbjct: 164 ISGLRKKSVAPGPGGLEDHLKNPGATDLFGQADAVVKHVLEGHDRGVNWASFHPTMPLIVSGADDRQIKLWRMNDNKAWEVDTCRGHYNNVSCSIFHPRQELILSNSEDRSIRVWDMSKRNCLHTFRREHDRFWVIAAHPTLNLFAAGHDAGMVVFKLERERPAHAISGNILYYVKEKYLRKLDFTTARDTAVMQLRGGSRSPIYSMSYNAAENSVLLSTRATNTENSTYDLYTISED--GDSSHAAEGKRSSGLTSIWVARNRFAVLDKSHSLVIKNLKNEVTKKLTIPNCDEIFYAGTGMLLLRDTDAVTLFDVQQKRNLGNVKIPKCRYVVWSADMSLVALLSKHLVTICTRKLEVLCSVHENTRVKSGTWDDSGVLIYTTSNHIKYAITNGDHGIIRTLDLPVYLTRIKGSQVFCLDRECKPRILNIDPTEYKFKLALINRKYEEVLHMVRNAKLVGQSIIAYLQQKGYPEVALHFVKDEKTRFGLALECSNIEAALEAAKSLDDKDCWEKLGEAALLQGNHQVVEMCYQRTKNFDKLSFLYLITGNLEKLKKMMKIAEIRKDTSGHFQNALYLGDVQERVKVLNGCGQNSLGYLTAMTHGLTEEAEKIKEGVDVEKTPLPSPAPGARLLQPPAPIAQSEQNWPLLTVSRGFFDTAMMT----AKKSEGIAVGLAVEDDGEAEGEWG--EEADLGLDDDGEV---KDDFQ--DAEAGDEEGD-GWAPDEDDLELPADLEPV------PVAAGDGEDGYFVAPTRGVPPTQHWTNNSSLPIDHILAGNFESAFRLLHDQVGVVNFEAYKTHFMTSYSRSRVSVFGSASTPSMYICPQSNWKEANPKNGLPAVGLKLNDLVSRLQSAYQLTTSGKFGEAAEKFRSILLSIPLLVVESKQDETEALQLRDICSSYLVGLTMESARKEHPKDTLENQKRVCEMAAYFTHCNLQPVHQILTLRTALNLFFKLKNFKTAGSFARRLLELGPKPEVAQQTRKILQACDKNPVDEHQLNYDEHNPFDVCAASFVPIYRGAECEVAPLSQAKYLPQYKGEVCRIDCVSQIGKGTAGLKIRRKV 1221 HSP 2 Score: 65.4698 bits (158), Expect = 6.371e-7 Identity = 29/90 (32.22%), Postives = 47/90 (52.22%), Query Frame = 0 Query: 42 CVVKHVLEGHDRGVNWASFHPSMPLIVSGADDRQIKLWRMNDSKAWEVDTCRGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTAKRTCL 131 C + + HD V FH PL VSG DD +IK+W + + T GH + + + +FH I+S S+D+++R+W+ R C+ Sbjct: 41 CTLLEKFDEHDGPVRGVDFHKQQPLFVSGGDDYKIKVWNYKQRRC--IFTLLGHLDYIRTTVFHHEYPWILSASDDQTVRIWNWQSRNCI 128
BLAST of coatomer subunit alpha isoform 11 vs. nr
Match: gi|1325317001|ref|XP_023340231.1| (coatomer subunit alpha-like isoform X1 [Eurytemora affinis]) HSP 1 Score: 1601.65 bits (4146), Expect = 0.000e+0 Identity = 785/1092 (71.89%), Postives = 889/1092 (81.41%), Query Frame = 0 Query: 9 VFSLRKKNVSPGLSAMDDHMKSGTGTDLFGQADCVVKHVLEGHDRGVNWASFHPSMPLIVSGADDRQIKLWRMNDSK--------------AWEVDTCRGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTAKRTCLHTFRREHDRFWIVAAHPTLNLFAAGHDSGMVVFKLERERPAHALHGNLLYYVKDKYLRKLDFTTQKDKAVLQLRGGSRSLVYSMSYNPAENAVVLVTRSSNLENSVYDLYTIPKDSDGQTPDAPEGKRSSGVTAIWVARNRIAVLDRSHTLIIKNMKNEVTKKVQTPNCDEIFYAGTGMLLLRDNDSVTLFDVQQKRNLGNVKIPKCRYVIWSPDMTTVALLSKHNITICNRKLQSLCSIHENTRVKSGTWDDTGVFIYTTSNHIKYAITNGDHGIIRTLNLPVYLTRIKGDKVFLLDRECKPCTMTIDTTEYRFKLALINRKYDEVLHMVRNAKLVGQSIIGYLQKKGYPEVALHFVKDEKTRFALALECMDIEVALEAAKALDDKDCWDKLSESALMLGNHQVVEMCYQRTKNFDKLSFLYLITGNLEKLRKMMKIAEIRKDHSGHFQNALYLGDVPERVKILKNCGQTSLAYLTAKTHGMDEEAEDIKSGVDPD-TPLPEPTGNGVPIVPPQPKSQMEENWPLLTVSKGFFEGIRAVRSGGGAKAAGGTGALAMEDTDMDEGAGAGWGDDDLGLDGDEEAVGGEDDFKSADGEEGPGEGDGGWDVDDGDLELPAELDGGTGSNVNTGATGDEDEGYFAPPTKGQSPAQNWASNSALPVDHIVAGSFESACRLLHDQVGVVNFEPYKSFFMTDFARGRTSFVALPALPALHGYPQSNWKEAGPKNGLPAVGLKLNHLVQRLQTCYQLTTAGKFSDAITKFRNILLSIPLLVVETKQDEAEAVQLREICMNYLVGLTMETKRKEMPKSSLEEQIRVCEMAAYFSHCHLQPVHQILTLRTACNLFFKLKNFKTAGSFARRLLELGPKPEVAQQTRKILQACDKNPTDEHKLAYDEFNPFDIDAVEYSPIYRGAEKVECPFCSAKYSPQAANTVCAVCTVGQVAKSTQGLKIRRKI 1085 + LRKK+V+PG ++DH+K+ TDLFGQAD VVKHVLEGHDRGVNWASFHP+MPLIVSGADDRQIKLWRMND+K AWEVDTCRGHYNNVS IFHPRQ+LI+SNSED+SIRVWD +KR CLHTFRREHDRFW++AAHPTLNLFAAGHD+GMVVFKLERERPAHA+ GN+LYYVK+KYLRKLDFTT +D AV+QLRGGSRS +YSMSYN AEN+V+L TR++N ENS YDLYTI +D G + A EGKRSSG+T+IWVARNR AVLD+SH+L+IKN+KNEVTKK+ PNCDEIFYAGTGMLLLRD D+VTLFDVQQKRNLGNVKIPKCRYV+WS DM+ VALLSKH +TIC RKL+ LCS+HENTRVKSGTWDD+GV IYTTSNHIKYAITNGDHGIIRTL+LPVYLTRIKG +VF LDRECKP + ID TEY+FKLALINRKY+EVLHMVRNAKLVGQSII YLQ+KGYPEVALHFVKDEKTRF LALEC +IE ALEAAK+LDDKDCW+KL E+AL+ GNHQVVEMCYQRTKNFDKLSFLYLITGNLEKL+KMMKIAEIRKD SGHFQNALYLGDV ERVK+L CGQ SL YLTA THG+ EEAE IK GVD + TPLP P + PP P +Q E+NWPLLTVS+GFF+ K+ G LA+ED EG + DLGLD D E +DDF+ D E G EGD GW D+ DLELPA+L+ A GD ++GYF PT+G P Q+W +NS+LP+DHI+AG+FESA RLLHDQVGVVNFE YK+ FMT ++R R S + P+++ PQSNWKEA PKNGLPAVGLKLN LV RLQ+ YQLTT+GKF +A KFR+ILLSIPLLVVE+KQDE EA+QLR+IC +YLVGLTME+ RKE PK +LE Q RVCEMAAYF+HC+LQPVHQILTLRTA NLFFKLKNFKTAGSFARRLLELGPKPEVAQQTRKILQACDKNP DEH+L YDE NPFD+ A + PIYRGAE P AKY PQ VC + V Q+ K T GLKIRRK+ Sbjct: 164 ISGLRKKSVAPGPGGLEDHLKNPGATDLFGQADAVVKHVLEGHDRGVNWASFHPTMPLIVSGADDRQIKLWRMNDNKSSSLGPGHSANIKNAWEVDTCRGHYNNVSCSIFHPRQELILSNSEDRSIRVWDMSKRNCLHTFRREHDRFWVIAAHPTLNLFAAGHDAGMVVFKLERERPAHAISGNILYYVKEKYLRKLDFTTARDTAVMQLRGGSRSPIYSMSYNAAENSVLLSTRATNTENSTYDLYTISED--GDSSHAAEGKRSSGLTSIWVARNRFAVLDKSHSLVIKNLKNEVTKKLTIPNCDEIFYAGTGMLLLRDTDAVTLFDVQQKRNLGNVKIPKCRYVVWSADMSLVALLSKHLVTICTRKLEVLCSVHENTRVKSGTWDDSGVLIYTTSNHIKYAITNGDHGIIRTLDLPVYLTRIKGSQVFCLDRECKPRILNIDPTEYKFKLALINRKYEEVLHMVRNAKLVGQSIIAYLQQKGYPEVALHFVKDEKTRFGLALECSNIEAALEAAKSLDDKDCWEKLGEAALLQGNHQVVEMCYQRTKNFDKLSFLYLITGNLEKLKKMMKIAEIRKDTSGHFQNALYLGDVQERVKVLNGCGQNSLGYLTAMTHGLTEEAEKIKEGVDVEKTPLPSPAPGARLLQPPAPIAQSEQNWPLLTVSRGFFDTAMMT----AKKSEGIAVGLAVEDDGEAEGEWG--EEADLGLDDDGEV---KDDFQ--DAEAGDEEGD-GWAPDEDDLELPADLEPV------PVAAGDGEDGYFVAPTRGVPPTQHWTNNSSLPIDHILAGNFESAFRLLHDQVGVVNFEAYKTHFMTSYSRSRVSVFGSASTPSMYICPQSNWKEANPKNGLPAVGLKLNDLVSRLQSAYQLTTSGKFGEAAEKFRSILLSIPLLVVESKQDETEALQLRDICSSYLVGLTMESARKEHPKDTLENQKRVCEMAAYFTHCNLQPVHQILTLRTALNLFFKLKNFKTAGSFARRLLELGPKPEVAQQTRKILQACDKNPVDEHQLNYDEHNPFDVCAASFVPIYRGAECEVAPLSQAKYLPQYKGEVCRIDCVSQIGKGTAGLKIRRKV 1235 HSP 2 Score: 65.4698 bits (158), Expect = 6.445e-7 Identity = 29/90 (32.22%), Postives = 47/90 (52.22%), Query Frame = 0 Query: 42 CVVKHVLEGHDRGVNWASFHPSMPLIVSGADDRQIKLWRMNDSKAWEVDTCRGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTAKRTCL 131 C + + HD V FH PL VSG DD +IK+W + + T GH + + + +FH I+S S+D+++R+W+ R C+ Sbjct: 41 CTLLEKFDEHDGPVRGVDFHKQQPLFVSGGDDYKIKVWNYKQRRC--IFTLLGHLDYIRTTVFHHEYPWILSASDDQTVRIWNWQSRNCI 128
BLAST of coatomer subunit alpha isoform 11 vs. nr
Match: gi|1034075300|ref|XP_016785811.1| (coatomer subunit alpha isoform X4 [Pan troglodytes]) HSP 1 Score: 1570.83 bits (4066), Expect = 0.000e+0 Identity = 750/1078 (69.57%), Postives = 879/1078 (81.54%), Query Frame = 0 Query: 9 VFSLRKKNVSPGLSAMDDHMKSGTGTDLFGQADCVVKHVLEGHDRGVNWASFHPSMPLIVSGADDRQIKLWRMNDSKAWEVDTCRGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTAKRTCLHTFRREHDRFWIVAAHPTLNLFAAGHDSGMVVFKLERERPAHALHGNLLYYVKDKYLRKLDFTTQKDKAVLQLRGGSRSLVYSMSYNPAENAVVLVTRSSNLENSVYDLYTIPKDSDGQTPDAPEGKRSSGVTAIWVARNRIAVLDRSHTLIIKNMKNEVTKKVQTPNCDEIFYAGTGMLLLRDNDSVTLFDVQQKRNLGNVKIPKCRYVIWSPDMTTVALLSKHNITICNRKLQSLCSIHENTRVKSGTWDDTGVFIYTTSNHIKYAITNGDHGIIRTLNLPVYLTRIKGDKVFLLDRECKPCTMTIDTTEYRFKLALINRKYDEVLHMVRNAKLVGQSIIGYLQKKGYPEVALHFVKDEKTRFALALECMDIEVALEAAKALDDKDCWDKLSESALMLGNHQVVEMCYQRTKNFDKLSFLYLITGNLEKLRKMMKIAEIRKDHSGHFQNALYLGDVPERVKILKNCGQTSLAYLTAKTHGMDEEAEDIKSGVDPDT-PLPEPTGNGVPIVPPQPKSQMEENWPLLTVSKGFFEGIRAVRSGGGAKAAGGTGALAMEDTDMDEGAGAGWGDD-DLGLDGD---EEAVGGEDDFKSADGEEGPGEGDGGWDVDDGDLELPAELDGGTGSNVNTGATGDEDEGYFAPPTKGQSPAQNWASNSALPVDHIVAGSFESACRLLHDQVGVVNFEPYKSFFMTDFARGRTSFVALPALPALHGYPQSNWKEAGPKNGLPAVGLKLNHLVQRLQTCYQLTTAGKFSDAITKFRNILLSIPLLVVETKQDEAEAVQLREICMNYLVGLTMETKRKEMPKSSLEEQIRVCEMAAYFSHCHLQPVHQILTLRTACNLFFKLKNFKTAGSFARRLLELGPKPEVAQQTRKILQACDKNPTDEHKLAYDEFNPFDIDAVEYSPIYRGAEKVECPFCSAKYSPQAANTVCAVCTVGQVAKSTQGLKI 1081 + LRKKN+SPG A++ ++ TG DLFG D VVKHVLEGHDRGVNWA+FHP+MPLIVSGADDRQ+K+WRMN+SKAWEVDTCRGHYNNVS +FHPRQ+LI+SNSEDKSIRVWD +KRT + TFRR+HDRFW++AAHP LNLFAAGHD GM+VFKLERERPA+A+HGN+L+YVKD++LR+LDF + KD AV+QLR GS+ V++MSYNPAENAV+L TR+SNLENS YDLYTIPKD+D Q PDAPEGKRSSG+TA+WVARNR AVLDR H+L+IKN+KNE+TKKVQ PNCDEIFYAGTG LLLRD DS+TLFDVQQKR L +VKI K +YVIWS DM+ VALL+KH I ICNRKL +LC+IHEN RVKSG WD++GVFIYTTSNHIKYA+T GDHGIIRTL+LP+Y+TR+KG+ V+ LDREC+P +TID TE++FKLALINRKYDEVLHMVRNAKLVGQSII YLQKKGYPEVALHFVKDEKTRF+LALEC +IE+ALEAAKALDDK+CW+KL E AL+ GNHQ+VEMCYQRTKNFDKLSFLYLITGNLEKLRKMMKIAEIRKD SGH+QNALYLGDV ERV+ILKNCGQ SLAYLTA THG+DEEAE +K DP+ +P+ N + PP P ++ NWPLLTVSKGFFEG A + GGA AA D D+D GWG+D +L LD D E G DD EEG GGWDV++ DLELP ELD ++ GA G ++G+F PPTKG SP Q W +NS LPVDHI+AGSFE+A RLLHDQVGV+ F PYK F+ +ARGRT++ ALP LP+++GYP NWK+AG KNG+PAVGLKLN L+QRLQ CYQLTT GKF +A+ KFR+ILLS+PLLVV+ KQ+ AEA QL IC Y+VGL+MET+RK++PK +LE+Q R+CEMAAYF+H +LQPVH IL LRTA NLFFKLKNFKTA +FARRLLELGPKPEVAQQTRKIL AC+KNPTD ++L YD NPFDI A Y PIYRG +CP A YSP+ +C V TV ++ K GL+I Sbjct: 110 ISGLRKKNLSPG--AVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAHPNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLHYVKDRFLRQLDFNSSKDVAVMQLRSGSKFPVFNMSYNPAENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVWVARNRFAVLDRMHSLLIKNLKNEITKKVQVPNCDEIFYAGTGNLLLRDADSITLFDVQQKRTLASVKISKVKYVIWSADMSHVALLAKHAIVICNRKLDALCNIHENIRVKSGAWDESGVFIYTTSNHIKYAVTTGDHGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLTIDPTEFKFKLALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEIALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDKLSFLYLITGNLEKLRKMMKIAEIRKDMSGHYQNALYLGDVSERVRILKNCGQKSLAYLTAATHGLDEEAESLKETFDPEKETIPDIDPNAKLLQPPAPIMPLDTNWPLLTVSKGFFEGTIASKGKGGALAA---------DIDIDTVGTEGWGEDAELQLDEDGFVEATEGLGDDALGKGQEEG-----GGWDVEE-DLELPPELD------ISPGAAGGAEDGFFVPPTKGTSPTQIWCNNSQLPVDHILAGSFETAMRLLHDQVGVIQFGPYKQLFLQTYARGRTTYQALPCLPSMYGYPNRNWKDAGLKNGVPAVGLKLNDLIQRLQLCYQLTTVGKFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLITICREYIVGLSMETERKKLPKETLEQQKRICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFKTAATFARRLLELGPKPEVAQQTRKILSACEKNPTDAYQLNYDMHNPFDICAASYRPIYRGKPVEKCPLSGACYSPEFKGQICRVTTVTEIGKDVIGLRI 1164
BLAST of coatomer subunit alpha isoform 11 vs. nr
Match: gi|114560615|ref|XP_001171574.1| (coatomer subunit alpha isoform X2 [Pan troglodytes] >gi|397481383|ref|XP_003811927.1| PREDICTED: coatomer subunit alpha [Pan paniscus] >gi|1331759934|gb|PNI19746.1| COPA isoform 1 [Pan troglodytes]) HSP 1 Score: 1568.13 bits (4059), Expect = 0.000e+0 Identity = 750/1077 (69.64%), Postives = 879/1077 (81.62%), Query Frame = 0 Query: 9 VFSLRKKNVSPGLSAMDDHMKSGTGTDLFGQADCVVKHVLEGHDRGVNWASFHPSMPLIVSGADDRQIKLWRMNDSKAWEVDTCRGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTAKRTCLHTFRREHDRFWIVAAHPTLNLFAAGHDSGMVVFKLERERPAHALHGNLLYYVKDKYLRKLDFTTQKDKAVLQLRGGSRSLVYSMSYNPAENAVVLVTRSSNLENSVYDLYTIPKDSDGQTPDAPEGKRSSGVTAIWVARNRIAVLDRSHTLIIKNMKNEVTKKVQTPNCDEIFYAGTGMLLLRDNDSVTLFDVQQKRNLGNVKIPKCRYVIWSPDMTTVALLSKHNITICNRKLQSLCSIHENTRVKSGTWDDTGVFIYTTSNHIKYAITNGDHGIIRTLNLPVYLTRIKGDKVFLLDRECKPCTMTIDTTEYRFKLALINRKYDEVLHMVRNAKLVGQSIIGYLQKKGYPEVALHFVKDEKTRFALALECMDIEVALEAAKALDDKDCWDKLSESALMLGNHQVVEMCYQRTKNFDKLSFLYLITGNLEKLRKMMKIAEIRKDHSGHFQNALYLGDVPERVKILKNCGQTSLAYLTAKTHGMDEEAEDIKSGVDPDT-PLPEPTGNGVPIVPPQPKSQMEENWPLLTVSKGFFEGIRAVRSGGGAKAAGGTGALAMEDTDMDEGAGAGWGDD---DLGLDGDEEAVGGEDDFKSADGEEGPGEGDGGWDVDDGDLELPAELDGGTGSNVNTGATGDEDEGYFAPPTKGQSPAQNWASNSALPVDHIVAGSFESACRLLHDQVGVVNFEPYKSFFMTDFARGRTSFVALPALPALHGYPQSNWKEAGPKNGLPAVGLKLNHLVQRLQTCYQLTTAGKFSDAITKFRNILLSIPLLVVETKQDEAEAVQLREICMNYLVGLTMETKRKEMPKSSLEEQIRVCEMAAYFSHCHLQPVHQILTLRTACNLFFKLKNFKTAGSFARRLLELGPKPEVAQQTRKILQACDKNPTDEHKLAYDEFNPFDIDAVEYSPIYRGAEKVECPFCSAKYSPQAANTVCAVCTVGQVAKSTQGLKI 1081 + LRKKN+SPG A++ ++ TG DLFG D VVKHVLEGHDRGVNWA+FHP+MPLIVSGADDRQ+K+WRMN+SKAWEVDTCRGHYNNVS +FHPRQ+LI+SNSEDKSIRVWD +KRT + TFRR+HDRFW++AAHP LNLFAAGHD GM+VFKLERERPA+A+HGN+L+YVKD++LR+LDF + KD AV+QLR GS+ V++MSYNPAENAV+L TR+SNLENS YDLYTIPKD+D Q PDAPEGKRSSG+TA+WVARNR AVLDR H+L+IKN+KNE+TKKVQ PNCDEIFYAGTG LLLRD DS+TLFDVQQKR L +VKI K +YVIWS DM+ VALL+KH I ICNRKL +LC+IHEN RVKSG WD++GVFIYTTSNHIKYA+T GDHGIIRTL+LP+Y+TR+KG+ V+ LDREC+P +TID TE++FKLALINRKYDEVLHMVRNAKLVGQSII YLQKKGYPEVALHFVKDEKTRF+LALEC +IE+ALEAAKALDDK+CW+KL E AL+ GNHQ+VEMCYQRTKNFDKLSFLYLITGNLEKLRKMMKIAEIRKD SGH+QNALYLGDV ERV+ILKNCGQ SLAYLTA THG+DEEAE +K DP+ +P+ N + PP P ++ NWPLLTVSKGFFEG A + GGA AA D D+D GWG+D L DG EA G D G+E EG GGWDV++ DLELP ELD ++ GA G ++G+F PPTKG SP Q W +NS LPVDHI+AGSFE+A RLLHDQVGV+ F PYK F+ +ARGRT++ ALP LP+++GYP NWK+AG KNG+PAVGLKLN L+QRLQ CYQLTT GKF +A+ KFR+ILLS+PLLVV+ KQ+ AEA QL IC Y+VGL+MET+RK++PK +LE+Q R+CEMAAYF+H +LQPVH IL LRTA NLFFKLKNFKTA +FARRLLELGPKPEVAQQTRKIL AC+KNPTD ++L YD NPFDI A Y PIYRG +CP A YSP+ +C V TV ++ K GL+I Sbjct: 164 ISGLRKKNLSPG--AVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAHPNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLHYVKDRFLRQLDFNSSKDVAVMQLRSGSKFPVFNMSYNPAENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVWVARNRFAVLDRMHSLLIKNLKNEITKKVQVPNCDEIFYAGTGNLLLRDADSITLFDVQQKRTLASVKISKVKYVIWSADMSHVALLAKHAIVICNRKLDALCNIHENIRVKSGAWDESGVFIYTTSNHIKYAVTTGDHGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLTIDPTEFKFKLALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEIALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDKLSFLYLITGNLEKLRKMMKIAEIRKDMSGHYQNALYLGDVSERVRILKNCGQKSLAYLTAATHGLDEEAESLKETFDPEKETIPDIDPNAKLLQPPAPIMPLDTNWPLLTVSKGFFEGTIASKGKGGALAA---------DIDIDTVGTEGWGEDAELQLDEDGFVEATEGLGDDALGKGQE---EG-GGWDVEE-DLELPPELD------ISPGAAGGAEDGFFVPPTKGTSPTQIWCNNSQLPVDHILAGSFETAMRLLHDQVGVIQFGPYKQLFLQTYARGRTTYQALPCLPSMYGYPNRNWKDAGLKNGVPAVGLKLNDLIQRLQLCYQLTTVGKFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLITICREYIVGLSMETERKKLPKETLEQQKRICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFKTAATFARRLLELGPKPEVAQQTRKILSACEKNPTDAYQLNYDMHNPFDICAASYRPIYRGKPVEKCPLSGACYSPEFKGQICRVTTVTEIGKDVIGLRI 1218 HSP 2 Score: 65.855 bits (159), Expect = 4.778e-7 Identity = 35/115 (30.43%), Postives = 53/115 (46.09%), Query Frame = 0 Query: 42 CVVKHVLEGHDRGVNWASFHPSMPLIVSGADDRQIKLWRMNDSKAWEVDTCRGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTAKRTCLHTFRREHDRFWIVAAHPTLNLFAAG 156 C + + HD V FH PL VSG DD +IK+W + + T GH + + + FH I+S S+D++IRVW+ RTC+ + HP +L + Sbjct: 41 CTLIDKFDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRC--LFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPAEDLVVSA 153
BLAST of coatomer subunit alpha isoform 11 vs. nr
Match: gi|1190462564|ref|XP_020835213.1| (coatomer subunit alpha [Phascolarctos cinereus]) HSP 1 Score: 1567.75 bits (4058), Expect = 0.000e+0 Identity = 752/1077 (69.82%), Postives = 879/1077 (81.62%), Query Frame = 0 Query: 9 VFSLRKKNVSPGLSAMDDHMKSGTGTDLFGQADCVVKHVLEGHDRGVNWASFHPSMPLIVSGADDRQIKLWRMNDSKAWEVDTCRGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTAKRTCLHTFRREHDRFWIVAAHPTLNLFAAGHDSGMVVFKLERERPAHALHGNLLYYVKDKYLRKLDFTTQKDKAVLQLRGGSRSLVYSMSYNPAENAVVLVTRSSNLENSVYDLYTIPKDSDGQTPDAPEGKRSSGVTAIWVARNRIAVLDRSHTLIIKNMKNEVTKKVQTPNCDEIFYAGTGMLLLRDNDSVTLFDVQQKRNLGNVKIPKCRYVIWSPDMTTVALLSKHNITICNRKLQSLCSIHENTRVKSGTWDDTGVFIYTTSNHIKYAITNGDHGIIRTLNLPVYLTRIKGDKVFLLDRECKPCTMTIDTTEYRFKLALINRKYDEVLHMVRNAKLVGQSIIGYLQKKGYPEVALHFVKDEKTRFALALECMDIEVALEAAKALDDKDCWDKLSESALMLGNHQVVEMCYQRTKNFDKLSFLYLITGNLEKLRKMMKIAEIRKDHSGHFQNALYLGDVPERVKILKNCGQTSLAYLTAKTHGMDEEAEDIKSGVDPDT-PLPEPTGNGVPIVPPQPKSQMEENWPLLTVSKGFFEGIRAVRSGGGAKAAGGTGALAMEDTDMDEGAGAGWGDD---DLGLDGDEEAVGGEDDFKSADGEEGPGEGDGGWDVDDGDLELPAELDGGTGSNVNTGATGDEDEGYFAPPTKGQSPAQNWASNSALPVDHIVAGSFESACRLLHDQVGVVNFEPYKSFFMTDFARGRTSFVALPALPALHGYPQSNWKEAGPKNGLPAVGLKLNHLVQRLQTCYQLTTAGKFSDAITKFRNILLSIPLLVVETKQDEAEAVQLREICMNYLVGLTMETKRKEMPKSSLEEQIRVCEMAAYFSHCHLQPVHQILTLRTACNLFFKLKNFKTAGSFARRLLELGPKPEVAQQTRKILQACDKNPTDEHKLAYDEFNPFDIDAVEYSPIYRGAEKVECPFCSAKYSPQAANTVCAVCTVGQVAKSTQGLKI 1081 + LRKKN+SPG A++ ++ TG DLFG D VVKHVLEGHDRGVNWA+FHP+MPLIVSGADDRQ+K+WRMN+SKAWEVDTCRGHYNNVS +FHPRQ+LI+SNSEDKSIRVWD +KRT + TFRR+HDRFW++AAHP LNLFAAGHD GM+VFKLERERPA+A+HGN+L+YVKD++LR+LDF + KD AV+QLR GS+ V++MSYNPAENAV+L TR+SNLENS YDLYTIPKD+D Q PDAPEGKRSSG+TA+WVARNR AVLDR H+L+IKN+KNE+TKKVQ PNCDEIFYAGTG LLLRD DS+TLFDVQQKR L +VKI K +YVIWS DM+ VALL+KH I ICNRKL+SLC+IHEN RVKSG WD++GVFIYTTSNHIKYA+T GDHGIIRTL+LP+Y+TR+KG+ V+ LDREC+P +TID TE++FKLALINRKYDEVLHMVRNAKLVGQSII YLQKKGYPEVALHFVKDEKTRF+LALEC +IE+ALEAAKALDDK+CW+KL E AL+ GNHQ+VEMCYQRTKNFDKLSFLYLITGNLEKLRKMMKIAEIRKD SGH+QNALYLGDV ERV+ILKNCGQ SLAYLTA THG+DEEAE +K DP+ +P+ N + PP P ++ NWPLLTVSKGFFEG A + GGA AA D D+D GWG+D L DG EA G D A G+E EG GGWDV++ DLELP ELD V+ GA G ++G+F PPTKG SP Q W +NS LPVDHI+AGSFE+A RLLHDQVGV F PYK F+ +ARGRT++ ALP LP ++GYP NWK+AG KNG+PAVGLKLN L+QRLQ CYQLTTAGKF +A+ KFR+ILLS+PLLVV++KQ+ AEA QL IC Y+VGL+ME +RK++PK SLE+Q R+CEMAAYF+H +LQPVH IL LRTA NLFFKLKNFKTA +FARRLLELGPKPEV+QQTRKIL AC+KNPTD ++L YD NPFDI A Y PIYRG +CP A Y P+ +C V TV ++ K GL+I Sbjct: 164 ISGLRKKNLSPG--AVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAHPNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLHYVKDRFLRQLDFNSSKDVAVMQLRSGSKFPVFNMSYNPAENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVWVARNRFAVLDRMHSLLIKNLKNEITKKVQVPNCDEIFYAGTGNLLLRDADSITLFDVQQKRTLASVKISKVKYVIWSADMSHVALLAKHAIMICNRKLESLCNIHENIRVKSGAWDESGVFIYTTSNHIKYAVTTGDHGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLTIDPTEFKFKLALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEIALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDKLSFLYLITGNLEKLRKMMKIAEIRKDMSGHYQNALYLGDVSERVRILKNCGQKSLAYLTAATHGLDEEAESLKETFDPEKETIPDIDPNARLLQPPAPIMPLDTNWPLLTVSKGFFEGSIASKGKGGALAA---------DIDIDTVGTEGWGEDAELQLDEDGFVEAAEGFGDEALAKGQE---EG-GGWDVEE-DLELPPELD------VSPGAAGGTEDGFFVPPTKGTSPTQIWCNNSQLPVDHILAGSFETAMRLLHDQVGVTQFGPYKQLFLQTYARGRTTYQALPCLPTMYGYPNRNWKDAGLKNGVPAVGLKLNDLIQRLQLCYQLTTAGKFEEAVEKFRSILLSVPLLVVDSKQEIAEAQQLIAICREYIVGLSMEIERKKLPKESLEQQKRICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFKTAATFARRLLELGPKPEVSQQTRKILSACEKNPTDAYQLNYDMHNPFDICAASYRPIYRGKPVEKCPLSGACYCPEFQGQICRVTTVTEIGKDVIGLRI 1218 HSP 2 Score: 66.6254 bits (161), Expect = 3.181e-7 Identity = 35/115 (30.43%), Postives = 54/115 (46.96%), Query Frame = 0 Query: 42 CVVKHVLEGHDRGVNWASFHPSMPLIVSGADDRQIKLWRMNDSKAWEVDTCRGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTAKRTCLHTFRREHDRFWIVAAHPTLNLFAAG 156 C + + HD V FH PL VSG DD +IK+W + + T GH + + + FH I+S S+D++IRVW+ RTC+ + HP+ +L + Sbjct: 41 CTLIDKFDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRC--LFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSA 153
BLAST of coatomer subunit alpha isoform 11 vs. nr
Match: gi|543748839|ref|XP_005515154.1| (coatomer subunit alpha [Columba livia] >gi|1307732179|gb|PKK18229.1| coatomer protein complex, subunit alpha [Columba livia]) HSP 1 Score: 1567.75 bits (4058), Expect = 0.000e+0 Identity = 751/1078 (69.67%), Postives = 878/1078 (81.45%), Query Frame = 0 Query: 9 VFSLRKKNVSPGLSAMDDHMKSGTGTDLFGQADCVVKHVLEGHDRGVNWASFHPSMPLIVSGADDRQIKLWRMNDSKAWEVDTCRGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTAKRTCLHTFRREHDRFWIVAAHPTLNLFAAGHDSGMVVFKLERERPAHALHGNLLYYVKDKYLRKLDFTTQKDKAVLQLRGGSRSLVYSMSYNPAENAVVLVTRSSNLENSVYDLYTIPKDSDGQTPDAPEGKRSSGVTAIWVARNRIAVLDRSHTLIIKNMKNEVTKKVQTPNCDEIFYAGTGMLLLRDNDSVTLFDVQQKRNLGNVKIPKCRYVIWSPDMTTVALLSKHNITICNRKLQSLCSIHENTRVKSGTWDDTGVFIYTTSNHIKYAITNGDHGIIRTLNLPVYLTRIKGDKVFLLDRECKPCTMTIDTTEYRFKLALINRKYDEVLHMVRNAKLVGQSIIGYLQKKGYPEVALHFVKDEKTRFALALECMDIEVALEAAKALDDKDCWDKLSESALMLGNHQVVEMCYQRTKNFDKLSFLYLITGNLEKLRKMMKIAEIRKDHSGHFQNALYLGDVPERVKILKNCGQTSLAYLTAKTHGMDEEAEDIKSGVDPDTPL-PEPTGNGVPIVPPQPKSQMEENWPLLTVSKGFFEGIRAVRSGGGAKAAGGTGALAMEDTDMDEGAGAGWGDD-DLGLDGDEEAVGGEDDFKSADGEEGPGEGD---GGWDVDDGDLELPAELDGGTGSNVNTGATGDEDEGYFAPPTKGQSPAQNWASNSALPVDHIVAGSFESACRLLHDQVGVVNFEPYKSFFMTDFARGRTSFVALPALPALHGYPQSNWKEAGPKNGLPAVGLKLNHLVQRLQTCYQLTTAGKFSDAITKFRNILLSIPLLVVETKQDEAEAVQLREICMNYLVGLTMETKRKEMPKSSLEEQIRVCEMAAYFSHCHLQPVHQILTLRTACNLFFKLKNFKTAGSFARRLLELGPKPEVAQQTRKILQACDKNPTDEHKLAYDEFNPFDIDAVEYSPIYRGAEKVECPFCSAKYSPQAANTVCAVCTVGQVAKSTQGLKI 1081 + LRKKN+SPG A++ ++ TG DLFG D VVKHVLEGHDRGVNWA+FHP+MPLIVSGADDRQ+K+WRMN+SKAWEVDTCRGHYNNVS +FHPRQ+LI+SNSEDKSIRVWD +KRT + TFRR+HDRFW++AAHP LNLFAAGHD GM+VFKLERERPA+A+HGN+LYYVKD++LR+LDF + KD AV+QLR GS+ V++MSYNPAENAV+L TR+SNLENS YDLYTIPKD+D Q PDAPEGKRSSG+TA+WVARNR AVLDR H+++IKN+KNE+TKKVQ PNCDEIFYAGTG LLLRD DS+TLFDVQQKR L +VKI K +YVIWS DM+ VALL+KH I ICNRKL+SLC+IHEN RVKSG WD++GVFIYTTSNHIKYA+T GDHGIIRTL+LP+Y+TR+KG+ V+ LDREC+P +TID TE++FKLALINRKYDEVLHMVRNAKLVGQSII YLQKKGYPEVALHFVKDEKTRF+LALEC +IE+ALEAAKALDDK+CW+KL E AL+ GNHQ+VEMCYQRTKNFD+LSFLYLITGNLEKLRKMMKIAEIRKD SGH+QNALYLGDV ERV+ILKNCGQ SLAYLTA THG+DEEAE +K DP+ + P+ N + PP P ++ NWPLLTVSKGFFEG A + GGA AA D D+D GWG+D +L LD D GE GEEG +G GGW+V++ DL+LP ELD V G G ++G+F PPTKG SPAQ W +NS LPVDHI+AGSFE+A RLLHDQVGV NF PYK F+ +ARGRT++ ALP LPA++GYP NWKEAG KN LPAVGLKLN L+QRLQ CYQLTTAGKF +A+ KFR+ILLS+PLLVV+ KQ+ AEA QL IC Y+VGL+ME +RK++PK +LE+Q R+CEMAAYF+H +LQPVH IL LRTA NLFFKLKNFKTA +FARRLLELGPKPEVAQQTRKIL AC+KNPTD ++L YD NPFDI A Y PIYRG +CP A Y P+ +C V TV ++ K GL+I Sbjct: 164 ISGLRKKNLSPG--AVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAHPNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLYYVKDRFLRQLDFNSSKDVAVMQLRSGSKFPVFNMSYNPAENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVWVARNRFAVLDRMHSILIKNLKNEITKKVQVPNCDEIFYAGTGNLLLRDADSITLFDVQQKRTLASVKISKVKYVIWSADMSHVALLAKHAIMICNRKLESLCNIHENIRVKSGAWDESGVFIYTTSNHIKYAVTTGDHGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLTIDPTEFKFKLALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEIALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDRLSFLYLITGNLEKLRKMMKIAEIRKDMSGHYQNALYLGDVAERVRILKNCGQKSLAYLTAATHGLDEEAESLKETFDPEKEMIPDIDHNAKLLQPPAPVMPLDTNWPLLTVSKGFFEGTIASKGKGGALAA---------DIDIDAVGTEGWGEDAELQLDEDGFVDAGE-----GFGEEGLSKGQEDGGGWEVEE-DLDLPPELD------VPAGPAGAAEDGFFVPPTKGTSPAQVWCNNSQLPVDHILAGSFETAMRLLHDQVGVTNFGPYKQLFLQTYARGRTTYQALPCLPAMYGYPHRNWKEAGLKNALPAVGLKLNDLIQRLQVCYQLTTAGKFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLIAICREYIVGLSMEIERKKLPKETLEQQKRICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFKTAATFARRLLELGPKPEVAQQTRKILSACEKNPTDTYQLNYDMHNPFDICASSYRPIYRGKPVEKCPLSGACYCPEFHGQICRVTTVTEIGKDVIGLRI 1218 HSP 2 Score: 66.6254 bits (161), Expect = 3.347e-7 Identity = 35/115 (30.43%), Postives = 54/115 (46.96%), Query Frame = 0 Query: 42 CVVKHVLEGHDRGVNWASFHPSMPLIVSGADDRQIKLWRMNDSKAWEVDTCRGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTAKRTCLHTFRREHDRFWIVAAHPTLNLFAAG 156 C + + HD V FH PL VSG DD +IK+W + + T GH + + + FH I+S S+D++IRVW+ RTC+ + HP+ +L + Sbjct: 41 CTLIDKFDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRC--LFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSA 153
BLAST of coatomer subunit alpha isoform 11 vs. nr
Match: gi|291397624|ref|XP_002715282.1| (PREDICTED: coatomer subunit alpha isoform X2 [Oryctolagus cuniculus]) HSP 1 Score: 1567.36 bits (4057), Expect = 0.000e+0 Identity = 751/1077 (69.73%), Postives = 878/1077 (81.52%), Query Frame = 0 Query: 9 VFSLRKKNVSPGLSAMDDHMKSGTGTDLFGQADCVVKHVLEGHDRGVNWASFHPSMPLIVSGADDRQIKLWRMNDSKAWEVDTCRGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTAKRTCLHTFRREHDRFWIVAAHPTLNLFAAGHDSGMVVFKLERERPAHALHGNLLYYVKDKYLRKLDFTTQKDKAVLQLRGGSRSLVYSMSYNPAENAVVLVTRSSNLENSVYDLYTIPKDSDGQTPDAPEGKRSSGVTAIWVARNRIAVLDRSHTLIIKNMKNEVTKKVQTPNCDEIFYAGTGMLLLRDNDSVTLFDVQQKRNLGNVKIPKCRYVIWSPDMTTVALLSKHNITICNRKLQSLCSIHENTRVKSGTWDDTGVFIYTTSNHIKYAITNGDHGIIRTLNLPVYLTRIKGDKVFLLDRECKPCTMTIDTTEYRFKLALINRKYDEVLHMVRNAKLVGQSIIGYLQKKGYPEVALHFVKDEKTRFALALECMDIEVALEAAKALDDKDCWDKLSESALMLGNHQVVEMCYQRTKNFDKLSFLYLITGNLEKLRKMMKIAEIRKDHSGHFQNALYLGDVPERVKILKNCGQTSLAYLTAKTHGMDEEAEDIKSGVDPDT-PLPEPTGNGVPIVPPQPKSQMEENWPLLTVSKGFFEGIRAVRSGGGAKAAGGTGALAMEDTDMDEGAGAGWGDD---DLGLDGDEEAVGGEDDFKSADGEEGPGEGDGGWDVDDGDLELPAELDGGTGSNVNTGATGDEDEGYFAPPTKGQSPAQNWASNSALPVDHIVAGSFESACRLLHDQVGVVNFEPYKSFFMTDFARGRTSFVALPALPALHGYPQSNWKEAGPKNGLPAVGLKLNHLVQRLQTCYQLTTAGKFSDAITKFRNILLSIPLLVVETKQDEAEAVQLREICMNYLVGLTMETKRKEMPKSSLEEQIRVCEMAAYFSHCHLQPVHQILTLRTACNLFFKLKNFKTAGSFARRLLELGPKPEVAQQTRKILQACDKNPTDEHKLAYDEFNPFDIDAVEYSPIYRGAEKVECPFCSAKYSPQAANTVCAVCTVGQVAKSTQGLKI 1081 + LRKKN+SPG A++ ++ TG DLFG D VVKHVLEGHDRGVNWA+FHP+MPLIVSGADDRQ+K+WRMN+SKAWEVDTCRGHYNNVS +FHPRQ+LI+SNSEDKSIRVWD +KRT + TFRR+HDRFW++AAHP LNLFAAGHD GM+VFKLERERPA+A+HGN+L+YVKD++LR+LDF + KD AV+QLR GS+ V++MSYNPAENAV+L TR+SNLENS YDLYTIPKD+D Q PDAPEGKRSSG+TA+WVARNR AVLDR H+L+IKN+KNE+TKKVQ PNCDEIFYAGTG LLLRD DS+TLFDVQQKR L +VKI K +YVIWS DM+ VALL+KH I ICNRKL +LC+IHEN RVKSG WD++GVFIYTTSNHIKYA+T GDHGIIRTL+LP+Y+TR+KG+ V+ LDREC+P +TID TE++FKLALINRKYDEVLHMVRNAKLVGQSII YLQKKGYPEVALHFVKDEKTRF+LALEC +IE+ALEAAKALDDK+CW+KL E AL+ GNHQ+VEMCYQRTKNFDKLSFLYLITGNLEKLRKMMKIAEIRKD SGH+QNALYLGDV ERV+ILKNCGQ SLAYLTA THG+DEEAE +K DP+ +P+ N + PP P ++ NWPLLTVSKGFFEG A + GGA AA D D+D GWG+D L DG EA G D G+E EG GGWDV++ DLELP ELD V GA G ++G+F PPTKG SP Q W +NS LPVDHI+AGSFE+A RLLHDQVGV+ F PYK F+ FARGRT++ ALP LP+++GYP NWK+AG KNG+PAVGLKLN L+QRLQ CYQLTT GKF +A+ KFR+ILLS+PLLVV+ KQ+ AEA QL IC Y+VGL+ME +RK++PK +LE+Q R+CEMAAYF+H +LQPVH IL LRTA NLFFKLKNFKTA +FARRLLELGPKPEVAQQTRKIL AC+KNPTD ++L YD NPFDI A Y PIYRG +CP A YSP+ + +C V TV ++ K GL+I Sbjct: 164 ISGLRKKNLSPG--AVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAHPNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLHYVKDRFLRQLDFNSSKDVAVMQLRSGSKFPVFNMSYNPAENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVWVARNRFAVLDRMHSLLIKNLKNEITKKVQVPNCDEIFYAGTGNLLLRDADSITLFDVQQKRTLASVKISKVKYVIWSADMSHVALLAKHAIVICNRKLDALCNIHENIRVKSGAWDESGVFIYTTSNHIKYAVTTGDHGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLTIDPTEFKFKLALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEIALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDKLSFLYLITGNLEKLRKMMKIAEIRKDMSGHYQNALYLGDVSERVRILKNCGQKSLAYLTAATHGLDEEAESLKETFDPEKETIPDIDPNAKLLQPPAPIMPLDTNWPLLTVSKGFFEGTIASKGKGGALAA---------DIDIDTVGTEGWGEDAELQLDEDGFVEATEGLGDDALGKGQE---EG-GGWDVEE-DLELPPELD------VPPGAAGGAEDGFFVPPTKGTSPTQIWCNNSQLPVDHILAGSFETAMRLLHDQVGVIQFGPYKQLFLQTFARGRTTYQALPCLPSMYGYPNRNWKDAGLKNGVPAVGLKLNDLIQRLQLCYQLTTVGKFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLITICREYIVGLSMEIERKKLPKETLEQQKRICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFKTAATFARRLLELGPKPEVAQQTRKILSACEKNPTDAYQLNYDMHNPFDICAASYRPIYRGKPVEKCPLSGACYSPEFKSQICRVTTVTEIGKDVIGLRI 1218 HSP 2 Score: 66.6254 bits (161), Expect = 3.154e-7 Identity = 35/115 (30.43%), Postives = 54/115 (46.96%), Query Frame = 0 Query: 42 CVVKHVLEGHDRGVNWASFHPSMPLIVSGADDRQIKLWRMNDSKAWEVDTCRGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTAKRTCLHTFRREHDRFWIVAAHPTLNLFAAG 156 C + + HD V FH PL VSG DD +IK+W + + T GH + + + FH I+S S+D++IRVW+ RTC+ + HP+ +L + Sbjct: 41 CTLIDKFDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRC--LFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSA 153
BLAST of coatomer subunit alpha isoform 11 vs. nr
Match: gi|562882688|ref|XP_006168890.1| (PREDICTED: coatomer subunit alpha [Tupaia chinensis]) HSP 1 Score: 1566.98 bits (4056), Expect = 0.000e+0 Identity = 752/1078 (69.76%), Postives = 878/1078 (81.45%), Query Frame = 0 Query: 9 VFSLRKKNVSPGLSAMDDHMKSGTGTDLFGQADCVVKHVLEGHDRGVNWASFHPSMPLIVSGADDRQIKLWRMNDSKAWEVDTCRGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTAKRTCLHTFRREHDRFWIVAAHPTLNLFAAGHDSGMVVFKLERERPAHALHGNLLYYVKDKYLRKLDFTTQKDKAVLQLRGGSRSLVYSMSYNPAENAVVLVTRSSNLENSVYDLYTIPKDSDGQTPDAPEGKRSSGVTAIWVARNRIAVLDRSHTLIIKNMKNEVTKKVQTPNCDEIFYAGTGMLLLRDNDSVTLFDVQQKRNLGNVKIPKCRYVIWSPDMTTVALLSKHNITICNRKLQSLCSIHENTRVKSGTWDDTGVFIYTTSNHIKYAITNGDHGIIRTLNLPVYLTRIKGDKVFLLDRECKPCTMTIDTTEYRFKLALINRKYDEVLHMVRNAKLVGQSIIGYLQKKGYPEVALHFVKDEKTRFALALECMDIEVALEAAKALDDKDCWDKLSESALMLGNHQVVEMCYQRTKNFDKLSFLYLITGNLEKLRKMMKIAEIRKDHSGHFQNALYLGDVPERVKILKNCGQTSLAYLTAKTHGMDEEAEDIKSGVDPDT-PLPEPTGNGVPIVPPQPKSQMEENWPLLTVSKGFFEGIRAVRSGGGAKAAGGTGALAMEDTDMDEGAGAGWGDD-DLGLDGD---EEAVGGEDDFKSADGEEGPGEGDGGWDVDDGDLELPAELDGGTGSNVNTGATGDEDEGYFAPPTKGQSPAQNWASNSALPVDHIVAGSFESACRLLHDQVGVVNFEPYKSFFMTDFARGRTSFVALPALPALHGYPQSNWKEAGPKNGLPAVGLKLNHLVQRLQTCYQLTTAGKFSDAITKFRNILLSIPLLVVETKQDEAEAVQLREICMNYLVGLTMETKRKEMPKSSLEEQIRVCEMAAYFSHCHLQPVHQILTLRTACNLFFKLKNFKTAGSFARRLLELGPKPEVAQQTRKILQACDKNPTDEHKLAYDEFNPFDIDAVEYSPIYRGAEKVECPFCSAKYSPQAANTVCAVCTVGQVAKSTQGLKI 1081 + LRKKN+SPG A++ ++ TG DLFG D VVKHVLEGHDRGVNWA+FHP+MPLIVSGADDRQ+K+WRMN+SKAWEVDTCRGHYNNVS +FHPRQ+LI+SNSEDKSIRVWD +KRT + TFRR+HDRFW++AAHP LNLFAAGHD GM+VFKLERERPA+A+HGN+L+YVKD++LR+LDF + KD AV+QLR GS+ V++MSYNPAENAV+L TR+SNLENS YDLYTIPKDSD Q+PDAPEGKRSSG+TA+WVARNR AVLDR H+L+IKN+KNE+TKKVQ PNCDEIFYAGTG LLLRD DS+TLFDVQQKR L +VKI K +YVIWS DM+ VALL+KH I ICNRKL +LC+IHEN RVKSG WD++GVFIYTTSNHIKYA+T GDHGIIRTL+LP+Y+TR+KG+ V+ LDREC+P +TID TE++FKLALINRKYDEVLHMVRNAKLVGQSII YLQKKGYPEVALHFVKDEKTRF+LALEC +IE+ALEAAKALDDK+CW+KL E AL+ GNHQ+VEMCYQRTKNFDKLSFLYLITGNLEKLRKMMKIAEIRKD SGH+QNALYLGDV ERV+ILKNCGQ SLAYLTA THG+DEEAE +K DP+ +P+ N + PP P ++ NWPLLTVSKGFFEG A + GGA AA D D+D GWG+D +L LD D E G DD EEG GGWDV++ DLELP ELD V GA G ++G+F PPTKG SPAQ W +NS LPVDHI+AGSFE+A RLLHDQVGV+ F PYK F+ +ARGRT++ ALP LP+++GYP NWK+AG KNG+PAVGLKLN L+QRLQ CYQLTT GKF +A+ KFR+ILLS+PLLVV+ KQ+ AEA QL IC Y+VGL+ME +RK++PK +LE+Q R+CEMAAYF+H +LQPVH IL LRTA NLFFKLKNFKTA +FARRLLELGPKPEVAQQTRKIL AC+KNPTD +L YD NPFDI A Y PIYRG +CP A YSP+ +C V TV ++ K GL+I Sbjct: 164 ISGLRKKNLSPG--AVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAHPNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLHYVKDRFLRQLDFNSSKDVAVMQLRSGSKFPVFNMSYNPAENAVLLCTRASNLENSTYDLYTIPKDSDSQSPDAPEGKRSSGLTAVWVARNRFAVLDRMHSLLIKNLKNEITKKVQVPNCDEIFYAGTGNLLLRDADSITLFDVQQKRTLASVKISKVKYVIWSADMSHVALLAKHAIVICNRKLDALCNIHENIRVKSGAWDESGVFIYTTSNHIKYAVTTGDHGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLTIDPTEFKFKLALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEIALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDKLSFLYLITGNLEKLRKMMKIAEIRKDMSGHYQNALYLGDVSERVRILKNCGQKSLAYLTAATHGLDEEAESLKETFDPEKETIPDIDPNAKLLQPPAPIMPLDTNWPLLTVSKGFFEGSIASKGKGGALAA---------DIDIDTVGAEGWGEDAELQLDEDGFVETTEGLGDDVLGKGQEEG-----GGWDVEE-DLELPPELD------VPPGAAGGAEDGFFVPPTKGTSPAQLWCNNSQLPVDHILAGSFETAMRLLHDQVGVIQFGPYKPLFLQTYARGRTTYQALPCLPSMYGYPNRNWKDAGLKNGVPAVGLKLNDLIQRLQLCYQLTTVGKFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLITICREYIVGLSMEIERKKLPKETLEQQKRICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFKTAATFARRLLELGPKPEVAQQTRKILSACEKNPTDACQLNYDMHNPFDICAASYRPIYRGKPVEKCPLSGACYSPEFKGQICRVTTVTEIGKDVIGLRI 1218 HSP 2 Score: 66.6254 bits (161), Expect = 3.023e-7 Identity = 35/115 (30.43%), Postives = 54/115 (46.96%), Query Frame = 0 Query: 42 CVVKHVLEGHDRGVNWASFHPSMPLIVSGADDRQIKLWRMNDSKAWEVDTCRGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTAKRTCLHTFRREHDRFWIVAAHPTLNLFAAG 156 C + + HD V FH PL VSG DD +IK+W + + T GH + + + FH I+S S+D++IRVW+ RTC+ + HP+ +L + Sbjct: 41 CTLIDKFDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRC--LFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSA 153
BLAST of coatomer subunit alpha isoform 11 vs. nr
Match: gi|1212393845|ref|XP_021523033.1| (coatomer subunit alpha isoform X2 [Aotus nancymaae]) HSP 1 Score: 1566.59 bits (4055), Expect = 0.000e+0 Identity = 749/1077 (69.55%), Postives = 879/1077 (81.62%), Query Frame = 0 Query: 9 VFSLRKKNVSPGLSAMDDHMKSGTGTDLFGQADCVVKHVLEGHDRGVNWASFHPSMPLIVSGADDRQIKLWRMNDSKAWEVDTCRGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTAKRTCLHTFRREHDRFWIVAAHPTLNLFAAGHDSGMVVFKLERERPAHALHGNLLYYVKDKYLRKLDFTTQKDKAVLQLRGGSRSLVYSMSYNPAENAVVLVTRSSNLENSVYDLYTIPKDSDGQTPDAPEGKRSSGVTAIWVARNRIAVLDRSHTLIIKNMKNEVTKKVQTPNCDEIFYAGTGMLLLRDNDSVTLFDVQQKRNLGNVKIPKCRYVIWSPDMTTVALLSKHNITICNRKLQSLCSIHENTRVKSGTWDDTGVFIYTTSNHIKYAITNGDHGIIRTLNLPVYLTRIKGDKVFLLDRECKPCTMTIDTTEYRFKLALINRKYDEVLHMVRNAKLVGQSIIGYLQKKGYPEVALHFVKDEKTRFALALECMDIEVALEAAKALDDKDCWDKLSESALMLGNHQVVEMCYQRTKNFDKLSFLYLITGNLEKLRKMMKIAEIRKDHSGHFQNALYLGDVPERVKILKNCGQTSLAYLTAKTHGMDEEAEDIKSGVDPDT-PLPEPTGNGVPIVPPQPKSQMEENWPLLTVSKGFFEGIRAVRSGGGAKAAGGTGALAMEDTDMDEGAGAGWGDD---DLGLDGDEEAVGGEDDFKSADGEEGPGEGDGGWDVDDGDLELPAELDGGTGSNVNTGATGDEDEGYFAPPTKGQSPAQNWASNSALPVDHIVAGSFESACRLLHDQVGVVNFEPYKSFFMTDFARGRTSFVALPALPALHGYPQSNWKEAGPKNGLPAVGLKLNHLVQRLQTCYQLTTAGKFSDAITKFRNILLSIPLLVVETKQDEAEAVQLREICMNYLVGLTMETKRKEMPKSSLEEQIRVCEMAAYFSHCHLQPVHQILTLRTACNLFFKLKNFKTAGSFARRLLELGPKPEVAQQTRKILQACDKNPTDEHKLAYDEFNPFDIDAVEYSPIYRGAEKVECPFCSAKYSPQAANTVCAVCTVGQVAKSTQGLKI 1081 + LRKKN+SPG A++ ++ TG DLFG D VVKHVLEGHDRGVNWA+FHP+MPLIVSGADDRQ+K+WRMN+SKAWEVDTCRGHYNNVS +FHPRQ+LI+SNSEDKSIRVWD +KRT + TFRR+HDRFW++AAHP LNLFAAGHD GM+VFKLERERPA+A+HGN+L+YVKD++LR+LDF + KD AV+QLR GS+ V++MSYNPAENAV+L TR+SNLENS YDLYTIPKD+D Q PDAPEGKRSSG+TA+WVARNR AVLDR H+L+IKN+KNE+TKKVQ PNCDEIFYAGTG LLLRD DS+TLFDVQQKR L +VKI K +YVIWS DM+ VALL+KH I ICNRKL +LC+IHEN RVKSG WD++GVFIYTTSNHIKYA+T GDHGIIRTL+LP+Y+TR+KG+ V+ LDREC+P +TID TE++FKLALINRKYDEVLHMVRNAKLVGQSII YLQKKGYPEVALHFVKDEKTRF+LALEC +IE+ALEAAKALDDK+CW+KL E AL+ GNHQ+VEMCYQRTKNFDKLSFLYLITGNLEKLRKMMKIAEIRKD SGH+QNALYLGDV ERV+ILKNCGQ SLAYLTA THG+DEEAE +K DP+ +P+ N + PP P ++ NWPLLTVSKGFFEG A + GGA AA D D+D GWG+D L DG EA G D G+E EG GGWDV++ DLELP ELD ++ GA G ++G+F PPTKG SP+Q W +NS LPVDHI+AGSFE+A RLLHDQVGV+ F PYK F+ +ARGRT++ ALP LP+++GYP NWK+AG KNG+PAVGLKLN L+QRLQ CYQLTT GKF +A+ KFR+ILLS+PLLVV+ KQ+ AEA QL IC Y+VGL+ME +RK++PK +LE+Q R+CEMAAYF+H +LQPVH IL LRTA NLFFKLKNFKTA +FARRLLELGPKPEVAQQTRKIL AC+KNPTD ++L YD NPFDI A Y PIYRG +CP A YSP+ +C V TV ++ K GL+I Sbjct: 164 ISGLRKKNLSPG--AVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAHPNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLHYVKDRFLRQLDFNSSKDVAVMQLRSGSKFPVFNMSYNPAENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVWVARNRFAVLDRMHSLLIKNLKNEITKKVQVPNCDEIFYAGTGNLLLRDADSITLFDVQQKRTLASVKISKVKYVIWSADMSHVALLAKHAIVICNRKLDALCNIHENIRVKSGAWDESGVFIYTTSNHIKYAVTTGDHGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLTIDPTEFKFKLALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEIALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDKLSFLYLITGNLEKLRKMMKIAEIRKDMSGHYQNALYLGDVSERVRILKNCGQKSLAYLTAATHGLDEEAESLKETFDPEKETIPDIDPNAKLLQPPAPIMPLDTNWPLLTVSKGFFEGTIASKGKGGALAA---------DIDIDTVGTEGWGEDAELQLDEDGFVEATEGLGDDALGKGQE---EG-GGWDVEE-DLELPPELD------ISPGAAGGAEDGFFVPPTKGTSPSQIWCNNSQLPVDHILAGSFETAMRLLHDQVGVIQFGPYKQLFLQTYARGRTTYQALPCLPSMYGYPNRNWKDAGLKNGVPAVGLKLNDLIQRLQLCYQLTTVGKFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLITICREYIVGLSMEIERKKLPKETLEQQKRICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFKTAATFARRLLELGPKPEVAQQTRKILSACEKNPTDAYQLNYDMHNPFDICAASYRPIYRGKPVEKCPLSGACYSPEFKGQICRVTTVTEIGKDVIGLRI 1218 HSP 2 Score: 66.6254 bits (161), Expect = 3.235e-7 Identity = 35/115 (30.43%), Postives = 54/115 (46.96%), Query Frame = 0 Query: 42 CVVKHVLEGHDRGVNWASFHPSMPLIVSGADDRQIKLWRMNDSKAWEVDTCRGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTAKRTCLHTFRREHDRFWIVAAHPTLNLFAAG 156 C + + HD V FH PL VSG DD +IK+W + + T GH + + + FH I+S S+D++IRVW+ RTC+ + HP+ +L + Sbjct: 41 CTLIDKFDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRC--LFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSA 153
BLAST of coatomer subunit alpha isoform 11 vs. nr
Match: gi|1044415124|ref|XP_017359099.1| (PREDICTED: coatomer subunit alpha isoform X2 [Cebus capucinus imitator]) HSP 1 Score: 1566.59 bits (4055), Expect = 0.000e+0 Identity = 749/1077 (69.55%), Postives = 878/1077 (81.52%), Query Frame = 0 Query: 9 VFSLRKKNVSPGLSAMDDHMKSGTGTDLFGQADCVVKHVLEGHDRGVNWASFHPSMPLIVSGADDRQIKLWRMNDSKAWEVDTCRGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTAKRTCLHTFRREHDRFWIVAAHPTLNLFAAGHDSGMVVFKLERERPAHALHGNLLYYVKDKYLRKLDFTTQKDKAVLQLRGGSRSLVYSMSYNPAENAVVLVTRSSNLENSVYDLYTIPKDSDGQTPDAPEGKRSSGVTAIWVARNRIAVLDRSHTLIIKNMKNEVTKKVQTPNCDEIFYAGTGMLLLRDNDSVTLFDVQQKRNLGNVKIPKCRYVIWSPDMTTVALLSKHNITICNRKLQSLCSIHENTRVKSGTWDDTGVFIYTTSNHIKYAITNGDHGIIRTLNLPVYLTRIKGDKVFLLDRECKPCTMTIDTTEYRFKLALINRKYDEVLHMVRNAKLVGQSIIGYLQKKGYPEVALHFVKDEKTRFALALECMDIEVALEAAKALDDKDCWDKLSESALMLGNHQVVEMCYQRTKNFDKLSFLYLITGNLEKLRKMMKIAEIRKDHSGHFQNALYLGDVPERVKILKNCGQTSLAYLTAKTHGMDEEAEDIKSGVDPDT-PLPEPTGNGVPIVPPQPKSQMEENWPLLTVSKGFFEGIRAVRSGGGAKAAGGTGALAMEDTDMDEGAGAGWGDD---DLGLDGDEEAVGGEDDFKSADGEEGPGEGDGGWDVDDGDLELPAELDGGTGSNVNTGATGDEDEGYFAPPTKGQSPAQNWASNSALPVDHIVAGSFESACRLLHDQVGVVNFEPYKSFFMTDFARGRTSFVALPALPALHGYPQSNWKEAGPKNGLPAVGLKLNHLVQRLQTCYQLTTAGKFSDAITKFRNILLSIPLLVVETKQDEAEAVQLREICMNYLVGLTMETKRKEMPKSSLEEQIRVCEMAAYFSHCHLQPVHQILTLRTACNLFFKLKNFKTAGSFARRLLELGPKPEVAQQTRKILQACDKNPTDEHKLAYDEFNPFDIDAVEYSPIYRGAEKVECPFCSAKYSPQAANTVCAVCTVGQVAKSTQGLKI 1081 + LRKKN+SPG A++ ++ TG DLFG D VVKHVLEGHDRGVNWA+FHP+MPLIVSGADDRQ+K+WRMN+SKAWEVDTCRGHYNNVS +FHPRQ+LI+SNSEDKSIRVWD +KRT + TFRR+HDRFW++AAHP LNLFAAGHD GM+VFKLERERPA+A+HGN+L+YVKD++LR+LDF + KD AV+QLR GS+ V++MSYNPAENAV+L TR+SNLENS YDLYTIPKD+D Q PDAPEGKRSSG+TA+WVARNR AVLDR H+L+IKN+KNE+TKKVQ PNCDEIFYAGTG LLLRD DS+TLFDVQQKR L +VKI K +YVIWS DM+ VALL+KH I ICNRKL +LC+IHEN RVKSG WD++GVFIYTTSNHIKYA+T GDHGIIRTL+LP+Y+TR+KG+ V+ LDREC+P +TID TE++FKLALINRKYDEVLHMVRNAKLVGQSII YLQKKGYPEVALHFVKDEKTRF+LALEC +IE+ALEAAKALDDK+CW+KL E AL+ GNHQ+VEMCYQRTKNFDKLSFLYLITGNLEKLRKMMKIAEIRKD SGH+QNALYLGDV ERV+ILKNCGQ SLAYLTA THG+DEEAE +K DP+ +P+ N + PP P ++ NWPLLTVSKGFFEG A + GGA AA D D+D GWG+D L DG EA G D G+E EG GGWDV++ DLELP ELD ++ GA G ++G+F PPTKG SP Q W +NS LPVDHI+AGSFE+A RLLHDQVGV+ F PYK F+ +ARGRT++ ALP LP+++GYP NWK+AG KNG+PAVGLKLN L+QRLQ CYQLTT GKF +A+ KFR+ILLS+PLLVV+ KQ+ AEA QL IC Y+VGL+ME +RK++PK +LE+Q R+CEMAAYF+H +LQPVH IL LRTA NLFFKLKNFKTA +FARRLLELGPKPEVAQQTRKIL AC+KNPTD ++L YD NPFDI A Y PIYRG +CP A YSP+ +C V TV ++ K GL+I Sbjct: 164 ISGLRKKNLSPG--AVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAHPNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLHYVKDRFLRQLDFNSSKDVAVMQLRSGSKFPVFNMSYNPAENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVWVARNRFAVLDRMHSLLIKNLKNEITKKVQVPNCDEIFYAGTGNLLLRDADSITLFDVQQKRTLASVKISKVKYVIWSADMSHVALLAKHAIVICNRKLDALCNIHENIRVKSGAWDESGVFIYTTSNHIKYAVTTGDHGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLTIDPTEFKFKLALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEIALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDKLSFLYLITGNLEKLRKMMKIAEIRKDMSGHYQNALYLGDVSERVRILKNCGQKSLAYLTAATHGLDEEAESLKETFDPEKETIPDIDPNAKLLQPPAPIMPLDTNWPLLTVSKGFFEGTIASKGKGGALAA---------DIDIDTVGSEGWGEDAELQLDEDGFVEATEGLGDDALGKGQE---EG-GGWDVEE-DLELPPELD------ISPGAAGGAEDGFFVPPTKGTSPTQIWCNNSQLPVDHILAGSFETAMRLLHDQVGVIQFGPYKQLFLQTYARGRTTYQALPCLPSMYGYPNRNWKDAGLKNGVPAVGLKLNDLIQRLQLCYQLTTVGKFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLITICREYIVGLSMEIERKKLPKETLEQQKRICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFKTAATFARRLLELGPKPEVAQQTRKILSACEKNPTDAYQLNYDMHNPFDICAASYRPIYRGKPVEKCPLSGACYSPEFKGQICRVTTVTEIGKDVIGLRI 1218 HSP 2 Score: 66.6254 bits (161), Expect = 3.235e-7 Identity = 35/115 (30.43%), Postives = 54/115 (46.96%), Query Frame = 0 Query: 42 CVVKHVLEGHDRGVNWASFHPSMPLIVSGADDRQIKLWRMNDSKAWEVDTCRGHYNNVSSVIFHPRQDLIVSNSEDKSIRVWDTAKRTCLHTFRREHDRFWIVAAHPTLNLFAAG 156 C + + HD V FH PL VSG DD +IK+W + + T GH + + + FH I+S S+D++IRVW+ RTC+ + HP+ +L + Sbjct: 41 CTLIDKFDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRC--LFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSA 153 The following BLAST results are available for this feature:
BLAST of coatomer subunit alpha isoform 11 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 15
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BLAST of coatomer subunit alpha isoform 11 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of coatomer subunit alpha isoform 11 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
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The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold52_size450388:293855..300761- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold52_size450388-snap-gene-3.20 ID=maker-scaffold52_size450388-snap-gene-3.20|Name=coatomer subunit alpha isoform 11|organism=Tigriopus kingsejongensis|type=gene|length=6907bp|location=Sequence derived from alignment at scaffold52_size450388:293855..300761- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'coatomer subunit alpha isoform 11' has the following synonyms
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