actin-related protein 2 3 complex subunit 4, maker-scaffold547_size140190-snap-gene-0.30 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of actin-related protein 2 3 complex subunit 4 vs. SwissProt
Match: gi|38372625|sp|P59998.3|ARPC4_HUMAN (RecName: Full=Actin-related protein 2/3 complex subunit 4; AltName: Full=Arp2/3 complex 20 kDa subunit; Short=p20-ARC >gi|38372626|sp|P59999.3|ARPC4_MOUSE RecName: Full=Actin-related protein 2/3 complex subunit 4; AltName: Full=Arp2/3 complex 20 kDa subunit; Short=p20-ARC >gi|119361249|sp|Q148J6.3|ARPC4_BOVIN RecName: Full=Actin-related protein 2/3 complex subunit 4; AltName: Full=Arp2/3 complex 20 kDa subunit; Short=p20-ARC) HSP 1 Score: 280.411 bits (716), Expect = 5.245e-97 Identity = 134/168 (79.76%), Postives = 152/168 (90.48%), Query Frame = 0 Query: 1 MSATLKPYLLAVKRTLQASMCLDNFSSQKVEKHNKPMIEVKESPELLLNPVIISRNEKERVLIEPSINSIRVSIAIKQADEIEKLLCHKFMGFMMRRAENFVILRRKKIEGYDISFLITNFHTEEMYRHKLIDFVIHFMEEIDKEISEMKLCVNSRARICAEEFLKRF 168 M+ATL+PYL AV+ TLQA++CL+NFSSQ VE+HNKP +EV+ S ELLL PV ISRNEKE+VLIE SINS+RVSIA+KQADEIEK+LCHKFM FMM RAENF ILRRK +EGYDISFLITNFHTE+MY+HKL+DFVIHFMEEIDKEISEMKL VN+RARI AEEFLK F Sbjct: 1 MTATLRPYLSAVRATLQAALCLENFSSQVVERHNKPEVEVRSSKELLLQPVTISRNEKEKVLIEGSINSVRVSIAVKQADEIEKILCHKFMRFMMMRAENFFILRRKPVEGYDISFLITNFHTEQMYKHKLVDFVIHFMEEIDKEISEMKLSVNARARIVAEEFLKNF 168
BLAST of actin-related protein 2 3 complex subunit 4 vs. SwissProt
Match: gi|20455480|sp|P58798.1|ARPC4_CAEEL (RecName: Full=Probable actin-related protein 2/3 complex subunit 4; AltName: Full=Arp2/3 complex 20 kDa subunit; Short=p20-ARC) HSP 1 Score: 256.914 bits (655), Expect = 1.093e-87 Identity = 117/168 (69.64%), Postives = 149/168 (88.69%), Query Frame = 0 Query: 1 MSATLKPYLLAVKRTLQASMCLDNFSSQKVEKHNKPMIEVKESPELLLNPVIISRNEKERVLIEPSINSIRVSIAIKQADEIEKLLCHKFMGFMMRRAENFVILRRKKIEGYDISFLITNFHTEEMYRHKLIDFVIHFMEEIDKEISEMKLCVNSRARICAEEFLKRF 168 MSATL+PYL AV+ TLQA++CL+ FSSQ VE+HNKP +EV+ S ELL+ PV+++RN++ERVLIEPS+NS+R+SIAIKQ+DEIEK+LCHKF FM +RA+NF +LRRK + GYDISFLIT HTE M++HKL+DF++HFM+EIDKEISEMKL +N+RAR+ AEEFLKRF Sbjct: 1 MSATLQPYLEAVRHTLQAALCLEQFSSQVVERHNKPEVEVQTSKELLMTPVVVARNKQERVLIEPSVNSVRISIAIKQSDEIEKILCHKFTRFMCQRADNFFVLRRKPLPGYDISFLITASHTEAMFKHKLVDFLLHFMQEIDKEISEMKLSLNARARVSAEEFLKRF 168
BLAST of actin-related protein 2 3 complex subunit 4 vs. SwissProt
Match: gi|74834471|sp|O96625.1|ARPC4_DICDI (RecName: Full=Actin-related protein 2/3 complex subunit 4; AltName: Full=Arp2/3 complex 20 kDa subunit; Short=p20-ARC) HSP 1 Score: 234.572 bits (597), Expect = 6.662e-79 Identity = 107/168 (63.69%), Postives = 139/168 (82.74%), Query Frame = 0 Query: 1 MSATLKPYLLAVKRTLQASMCLDNFSSQKVEKHNKPMIEVKESPELLLNPVIISRNEKERVLIEPSINSIRVSIAIKQADEIEKLLCHKFMGFMMRRAENFVILRRKKIEGYDISFLITNFHTEEMYRHKLIDFVIHFMEEIDKEISEMKLCVNSRARICAEEFLKRF 168 MS PYL ++ TL ASMCL NF SQ VE+HNKP +EVK S EL+LNPVII+RN+ ERVLIE SINSIR+S++IK++DE++ +L KF+ F+ +RAENF+ILRRK +EGYDISFL+TNFHTE M++HKL+DF+I FME+ID+EIS++KL +N+R RI A E+LK F Sbjct: 1 MSTAQVPYLNCIRNTLTASMCLQNFGSQIVERHNKPEVEVKTSKELVLNPVIIARNKNERVLIETSINSIRISVSIKKSDEVDVILAKKFVRFLQQRAENFIILRRKPVEGYDISFLVTNFHTENMFKHKLVDFIIQFMEDIDREISDLKLTLNARGRIVASEYLKNF 168
BLAST of actin-related protein 2 3 complex subunit 4 vs. SwissProt
Match: gi|2842698|sp|Q92352.1|ARPC4_SCHPO (RecName: Full=Actin-related protein 2/3 complex subunit 4; AltName: Full=Arp2/3 complex 20 kDa; Short=p20-ARC) HSP 1 Score: 223.016 bits (567), Expect = 2.298e-74 Identity = 105/168 (62.50%), Postives = 136/168 (80.95%), Query Frame = 0 Query: 1 MSATLKPYLLAVKRTLQASMCLDNFSSQKVEKHNKPMIEVKESPELLLNPVIISRNEKERVLIEPSINSIRVSIAIKQADEIEKLLCHKFMGFMMRRAENFVILRRKKIEGYDISFLITNFHTEEMYRHKLIDFVIHFMEEIDKEISEMKLCVNSRARICAEEFLKRF 168 MS TL+PYL AV+ TL AS+ L+ FSS+ VE+ ++P +EV SPE+LL P+++SRNE+E+ LIE S+NS+R SI IKQ DEIE++L KFM F+M RAE+F ILRRK ++GYDISFLITN+HTEEM +HKL+DF+I FMEE+D EISEMKL +N RAR+ AE +L F Sbjct: 1 MSNTLRPYLNAVRSTLTASLALEEFSSEIVERQSQPEVEVGRSPEILLKPLVVSRNEQEQCLIESSVNSVRFSIRIKQVDEIERILVRKFMQFLMGRAESFFILRRKPVQGYDISFLITNYHTEEMLKHKLVDFIIEFMEEVDAEISEMKLFLNGRARLVAETYLSCF 168
BLAST of actin-related protein 2 3 complex subunit 4 vs. SwissProt
Match: gi|510791481|sp|F4JUL9.1|ARPC4_ARATH (RecName: Full=Actin-related protein 2/3 complex subunit 4; AltName: Full=Actin-related protein C4; AltName: Full=Arp2/3 complex 20 kDa subunit; Short=p20-ARC) HSP 1 Score: 215.698 bits (548), Expect = 1.675e-71 Identity = 101/168 (60.12%), Postives = 134/168 (79.76%), Query Frame = 0 Query: 1 MSATLKPYLLAVKRTLQASMCLDNFSSQKVEKHNKPMIEVKESPELLLNPVIISRNEKERVLIEPSINSIRVSIAIKQADEIEKLLCHKFMGFMMRRAENFVILRRKKIEGYDISFLITNFHTEEMYRHKLIDFVIHFMEEIDKEISEMKLCVNSRARICAEEFLKRF 168 M+ +L+ YL +K TL+A+MCL NF Q+VE+HNKP +E+K SPELLLNPV+I RNE E+ LIE SINS+R+S+ +KQADE+E +L KF+ F+ RAE F +LRRK ++GYDISFLITN+H EEM + KLIDF+I FME+I+KEI ++K VN+R R+ A EFLK+F Sbjct: 1 MANSLRLYLACIKNTLEAAMCLQNFPCQEVERHNKPEVELKTSPELLLNPVLICRNEAEKCLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPVQGYDISFLITNYHCEEMQKQKLIDFIIQFMEDIEKEIRDLKESVNTRGRLVATEFLKQF 168
BLAST of actin-related protein 2 3 complex subunit 4 vs. SwissProt
Match: gi|549658|sp|P33204.2|ARPC4_YEAST (RecName: Full=Actin-related protein 2/3 complex subunit 4; AltName: Full=Arp2/3 complex 20 kDa; Short=p20-ARC) HSP 1 Score: 211.46 bits (537), Expect = 1.016e-69 Identity = 103/169 (60.95%), Postives = 133/169 (78.70%), Query Frame = 0 Query: 1 MSATLKPYLLAVKRTLQASMCLDNFSSQKVEKHNKPMIEV-KESPELLLNPVIISRNEKERVLIEPSINSIRVSIAIKQADEIEKLLCHKFMGFMMRRAENFVILRRKKIEGYDISFLITNFHTEEMYRHKLIDFVIHFMEEIDKEISEMKLCVNSRARICAEEFLKRF 168 MS +L+PYL AV+ +L+A++ L NFSSQ+VE+HN+P +EV S ELLL P+ ISRNE E+VLIEPS+NS+R+S+ +KQADEIE++L HKF F+ +RAE F ILRR I GY ISFLITN HTE M KL+DF+I FME++DKEISE+KL +N+RAR AE +L F Sbjct: 1 MSQSLRPYLTAVRYSLEAALTLSNFSSQEVERHNRPEVEVPNTSAELLLQPMHISRNENEQVLIEPSVNSVRMSLMVKQADEIEQILVHKFTRFLEQRAEAFYILRRVPIPGYSISFLITNKHTESMKTGKLVDFIIEFMEDVDKEISEIKLFLNARARFVAEAYLDEF 169
BLAST of actin-related protein 2 3 complex subunit 4 vs. nr
Match: gi|632987241|ref|XP_007910684.1| (PREDICTED: actin-related protein 2/3 complex subunit 4 [Callorhinchus milii]) HSP 1 Score: 281.952 bits (720), Expect = 3.352e-95 Identity = 135/168 (80.36%), Postives = 153/168 (91.07%), Query Frame = 0 Query: 1 MSATLKPYLLAVKRTLQASMCLDNFSSQKVEKHNKPMIEVKESPELLLNPVIISRNEKERVLIEPSINSIRVSIAIKQADEIEKLLCHKFMGFMMRRAENFVILRRKKIEGYDISFLITNFHTEEMYRHKLIDFVIHFMEEIDKEISEMKLCVNSRARICAEEFLKRF 168 M+ATL+PYL AV+ TLQA++CL+NFSSQ VE+HNKP +EV+ S ELLL PVIISRNEKE+VLIE SINS+RVSIAIKQADEIEK+LCHKFM FMM RAENF ILRRK +EGYDISFLITNFHTE+MY+HKL+DFVIHFMEEIDKE+SEMKL VN+RARI AEEFLK F Sbjct: 1 MTATLRPYLNAVRATLQAALCLENFSSQVVERHNKPEVEVRSSKELLLQPVIISRNEKEKVLIEGSINSVRVSIAIKQADEIEKILCHKFMRFMMMRAENFFILRRKAVEGYDISFLITNFHTEQMYKHKLVDFVIHFMEEIDKEVSEMKLSVNARARIVAEEFLKNF 168
BLAST of actin-related protein 2 3 complex subunit 4 vs. nr
Match: gi|345323683|ref|XP_003430736.1| (PREDICTED: actin-related protein 2/3 complex subunit 4 [Ornithorhynchus anatinus]) HSP 1 Score: 281.952 bits (720), Expect = 3.740e-95 Identity = 135/168 (80.36%), Postives = 153/168 (91.07%), Query Frame = 0 Query: 1 MSATLKPYLLAVKRTLQASMCLDNFSSQKVEKHNKPMIEVKESPELLLNPVIISRNEKERVLIEPSINSIRVSIAIKQADEIEKLLCHKFMGFMMRRAENFVILRRKKIEGYDISFLITNFHTEEMYRHKLIDFVIHFMEEIDKEISEMKLCVNSRARICAEEFLKRF 168 M+ATL+PYL AV+ TLQA++CL+NFSSQ VE+HNKP +EV+ S ELLL PVIISRNEKE+VLIE SINS+RVSIA+KQADEIEK+LCHKFM FMM RAENF ILRRK +EGYDISFLITNFHTE+MY+HKL+DFVIHFMEEIDKEISEMKL VN+RARI AEEFLK F Sbjct: 1 MTATLRPYLSAVRATLQAALCLENFSSQVVERHNKPEVEVRSSKELLLQPVIISRNEKEKVLIEGSINSVRVSIAVKQADEIEKILCHKFMRFMMMRAENFFILRRKPVEGYDISFLITNFHTEQMYKHKLVDFVIHFMEEIDKEISEMKLSVNARARIVAEEFLKNF 168
BLAST of actin-related protein 2 3 complex subunit 4 vs. nr
Match: gi|957851311|ref|XP_014675924.1| (PREDICTED: actin-related protein 2/3 complex subunit 4 isoform X2 [Priapulus caudatus]) HSP 1 Score: 281.952 bits (720), Expect = 4.128e-95 Identity = 134/168 (79.76%), Postives = 152/168 (90.48%), Query Frame = 0 Query: 1 MSATLKPYLLAVKRTLQASMCLDNFSSQKVEKHNKPMIEVKESPELLLNPVIISRNEKERVLIEPSINSIRVSIAIKQADEIEKLLCHKFMGFMMRRAENFVILRRKKIEGYDISFLITNFHTEEMYRHKLIDFVIHFMEEIDKEISEMKLCVNSRARICAEEFLKRF 168 MSATL+PYL AV+ TL A+MCL+NFSSQ VE+HNKP +EV+ S ELLL PV+ISRNEKE+VLIE S+NSIR+SI+IKQADEIEK+LCHKFM FMM RAENF +LRRK +EGYDISFLITNFHTE MY+HKL+DFVIHFMEEIDKEISEMKL VN+RARI AEEFLKRF Sbjct: 1 MSATLRPYLSAVRHTLAAAMCLENFSSQNVERHNKPEVEVRSSKELLLTPVVISRNEKEKVLIEGSVNSIRISISIKQADEIEKILCHKFMRFMMMRAENFFVLRRKPVEGYDISFLITNFHTEAMYKHKLVDFVIHFMEEIDKEISEMKLAVNARARISAEEFLKRF 168
BLAST of actin-related protein 2 3 complex subunit 4 vs. nr
Match: gi|229368144|gb|ACQ59052.1| (Actin-related protein 2/3 complex subunit 4 [Anoplopoma fimbria]) HSP 1 Score: 281.567 bits (719), Expect = 4.409e-95 Identity = 134/168 (79.76%), Postives = 153/168 (91.07%), Query Frame = 0 Query: 1 MSATLKPYLLAVKRTLQASMCLDNFSSQKVEKHNKPMIEVKESPELLLNPVIISRNEKERVLIEPSINSIRVSIAIKQADEIEKLLCHKFMGFMMRRAENFVILRRKKIEGYDISFLITNFHTEEMYRHKLIDFVIHFMEEIDKEISEMKLCVNSRARICAEEFLKRF 168 M+ATL+PYL AV+ TLQA++CL+NFSSQ VE+HNKP +EV+ S ELLL PV+ISRN+KERVLIE SINS+RVSIA+KQADEIEK+LCHKFM FMM RAENF ILRRK +EGYDISFLITNFHTE+MY+HKL+DFVIHFMEEIDKEISEMKL VN+RARI AEEFLK F Sbjct: 1 MTATLRPYLNAVRATLQAALCLENFSSQVVERHNKPEVEVRSSKELLLQPVVISRNDKERVLIEGSINSVRVSIAVKQADEIEKILCHKFMRFMMMRAENFFILRRKAVEGYDISFLITNFHTEQMYKHKLVDFVIHFMEEIDKEISEMKLSVNARARIVAEEFLKNF 168
BLAST of actin-related protein 2 3 complex subunit 4 vs. nr
Match: gi|655890282|ref|XP_008248167.1| (PREDICTED: actin-related protein 2/3 complex subunit 4 [Oryctolagus cuniculus]) HSP 1 Score: 281.567 bits (719), Expect = 4.867e-95 Identity = 135/168 (80.36%), Postives = 152/168 (90.48%), Query Frame = 0 Query: 1 MSATLKPYLLAVKRTLQASMCLDNFSSQKVEKHNKPMIEVKESPELLLNPVIISRNEKERVLIEPSINSIRVSIAIKQADEIEKLLCHKFMGFMMRRAENFVILRRKKIEGYDISFLITNFHTEEMYRHKLIDFVIHFMEEIDKEISEMKLCVNSRARICAEEFLKRF 168 M+ATL+PYL AV+ TLQA++CL+NFSSQ VE+HNKP +EV+ S ELLL PV ISRNEKERVLIE SINS+RVSIA+KQADEIEK+LCHKFM FMM RAENF ILRRK +EGYDISFLITNFHTE+MY+HKL+DFVIHFMEEIDKEISEMKL VN+RARI AEEFLK F Sbjct: 1 MTATLRPYLSAVRATLQAALCLENFSSQVVERHNKPEVEVRSSKELLLQPVTISRNEKERVLIEGSINSVRVSIAVKQADEIEKILCHKFMRFMMMRAENFFILRRKPVEGYDISFLITNFHTEQMYKHKLVDFVIHFMEEIDKEISEMKLSVNARARIVAEEFLKNF 168 The following BLAST results are available for this feature:
BLAST of actin-related protein 2 3 complex subunit 4 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 0
BLAST of actin-related protein 2 3 complex subunit 4 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 6
BLAST of actin-related protein 2 3 complex subunit 4 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold547_size140190:46575..48255- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold547_size140190-snap-gene-0.30 ID=maker-scaffold547_size140190-snap-gene-0.30|Name=actin-related protein 2 3 complex subunit 4|organism=Tigriopus kingsejongensis|type=gene|length=1681bp|location=Sequence derived from alignment at scaffold547_size140190:46575..48255- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'actin-related protein 2 3 complex subunit 4' has the following synonyms
Add to Basket
|