cuticle protein isoform b, maker-scaffold57_size444674-snap-gene-3.29 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of cuticle protein isoform b vs. L. salmonis genes
Match: EMLSAG00000001415 (supercontig:LSalAtl2s:LSalAtl2s1241:84693:85124:1 gene:EMLSAG00000001415 transcript:EMLSAT00000001415 description:"augustus-LSalAtl2s1241-processed-gene-0.12") HSP 1 Score: 117.087 bits (292), Expect = 3.964e-33 Identity = 69/122 (56.56%), Postives = 83/122 (68.03%), Query Frame = 0 Query: 157 ALLALAVVVLADN------PPPPSY--SPYKPEPKY-EEPAKYEYAYAVQDEYKQLDFNANEERDGYVTSGSYQVLLPDGRTQTVTYTV-DGYAGYVADVQYEGEAKYEPHYPKPAPKYPPP 268 ALLA+A+ AD P P+Y +PY P P Y E+PA Y+Y YAV DEY L+F A+E RDGY T+G Y V LPDGR QTV+Y V D Y+GYVADV Y GEAKYEP++P P+P P P Sbjct: 5 ALLAVAMSAPADTYRPAPYHPAPAYKPAPYHPAPSYKEDPAIYQYQYAVSDEYAGLNFGADEARDGYSTNGKYSVALPDGRIQTVSYNVADAYSGYVADVTYSGEAKYEPYHPAPSPYKPAP 126 HSP 2 Score: 89.3521 bits (220), Expect = 1.939e-22 Identity = 61/128 (47.66%), Postives = 74/128 (57.81%), Query Frame = 0 Query: 68 ALLALAVVVLADN------PPPPSY--SPYKPEPKY-EEPAKYEYAYAVQDEYKQLDFNANEERDGYVTSGSYQVLLPDGRTQTVTYTV-DGYAGYTFFALLALAVVVLADNPPPPSYSPYKPEPKYE 185 ALLA+A+ AD P P+Y +PY P P Y E+PA Y+Y YAV DEY L+F A+E RDGY T+G Y V LPDGR QTV+Y V D Y+GY + +P P SPYKP P Y Sbjct: 5 ALLAVAMSAPADTYRPAPYHPAPAYKPAPYHPAPSYKEDPAIYQYQYAVSDEYAGLNFGADEARDGYSTNGKYSVALPDGRIQTVSYNVADAYSGYVADVTYSGEAKYEPYHPAP---SPYKPAPVYH 129
BLAST of cuticle protein isoform b vs. L. salmonis genes
Match: EMLSAG00000001414 (supercontig:LSalAtl2s:LSalAtl2s1241:78790:79435:1 gene:EMLSAG00000001414 transcript:EMLSAT00000001414 description:"augustus-LSalAtl2s1241-processed-gene-0.11") HSP 1 Score: 112.464 bits (280), Expect = 4.343e-31 Identity = 59/95 (62.11%), Postives = 68/95 (71.58%), Query Frame = 0 Query: 176 SPYKPEPKY-EEPAKYEYAYAVQDEYKQLDFNANEERDGYVTSGSYQVLLPDGRTQTVTYTV-DGYAGYVADVQYEGEAKYEPHYPKPAPKYPPP 268 +PY P P Y E+PA Y+Y YAV DEY L+F A+E RDGY T G Y V LPDGR QTV+Y V D Y+GYVADV Y GEAKYEP +P P+P P P Sbjct: 43 APYHPAPSYKEDPAVYQYQYAVSDEYAGLNFGADEARDGYSTQGKYSVALPDGRIQTVSYNVADAYSGYVADVTYSGEAKYEPXHPAPSPYKPAP 137 HSP 2 Score: 85.8853 bits (211), Expect = 5.733e-21 Identity = 51/101 (50.50%), Postives = 60/101 (59.41%), Query Frame = 0 Query: 87 SPYKPEPKY-EEPAKYEYAYAVQDEYKQLDFNANEERDGYVTSGSYQVLLPDGRTQTVTYTV-DGYAGYTFFALLALAVVVLADNPPPPSYSPYKPEPKYE 185 +PY P P Y E+PA Y+Y YAV DEY L+F A+E RDGY T G Y V LPDGR QTV+Y V D Y+GY + +P P SPYKP P Y Sbjct: 43 APYHPAPSYKEDPAVYQYQYAVSDEYAGLNFGADEARDGYSTQGKYSVALPDGRIQTVSYNVADAYSGYVADVTYSGEAKYEPXHPAP---SPYKPAPVYH 140
BLAST of cuticle protein isoform b vs. L. salmonis genes
Match: EMLSAG00000009893 (supercontig:LSalAtl2s:LSalAtl2s643:512403:512841:-1 gene:EMLSAG00000009893 transcript:EMLSAT00000009893 description:"augustus-LSalAtl2s643-processed-gene-4.10") HSP 1 Score: 103.605 bits (257), Expect = 4.184e-28 Identity = 53/85 (62.35%), Postives = 62/85 (72.94%), Query Frame = 0 Query: 185 EEPAKYEYAYAVQDEYKQLDFNANEERDGYVTSGSYQVLLPDGRTQTVTYTV-DGYAGYVADVQYEGEAKYEPHYPKPAPKYPPP 268 E PA Y+Y YAV+D+Y ++F A+E RDGY T GSY V LPDGR QTVTY+V D Y+GYVADV Y GE KY P+ P PAP P P Sbjct: 37 EVPAAYQYQYAVKDDYSGVNFGADEARDGYATKGSYTVALPDGRLQTVTYSVTDAYSGYVADVXYSGEPKYAPYKPAPAPYKPTP 121 HSP 2 Score: 83.1889 bits (204), Expect = 2.215e-20 Identity = 58/124 (46.77%), Postives = 75/124 (60.48%), Query Frame = 0 Query: 63 MQTFFALLALAVVVLADNPPPPSYSPYKPEPKY---EEPAKYEYAYAVQDEYKQLDFNANEERDGYVTSGSYQVLLPDGRTQTVTYTV-DGYAGYTFFALLALAVVVLADNPPPPSYSPYKPEP 182 M+TF A+ AL + +AD+P P +P P E PA Y+Y YAV+D+Y ++F A+E RDGY T GSY V LPDGR QTVTY+V D Y+GY +A V + P Y+PYKP P Sbjct: 1 MKTFIAVSALLALAIADHPAPYHPAPAPYHPAPSYNEVPAAYQYQYAVKDDYSGVNFGADEARDGYATKGSYTVALPDGRLQTVTYSVTDAYSGY-------VADVXYSGE---PKYAPYKPAP 114
BLAST of cuticle protein isoform b vs. L. salmonis genes
Match: EMLSAG00000007669 (supercontig:LSalAtl2s:LSalAtl2s446:41257:76039:1 gene:EMLSAG00000007669 transcript:EMLSAT00000007669 description:"augustus-LSalAtl2s446-processed-gene-2.13") HSP 1 Score: 107.457 bits (267), Expect = 1.905e-27 Identity = 64/139 (46.04%), Postives = 79/139 (56.83%), Query Frame = 0 Query: 154 TFFALLALAVVVLADNPPPPSYSP-----------------YKPEPKY------EEPAKYEYAYAVQDEYKQLDFNANEERDGYVTSGSYQVLLPDGRTQTVTYTVDGYAGYVADVQYEGEAKYEPHYPKPAPKYPPPP 269 + A + LA V+AD+PP SY+P YKP P Y E P Y Y YAV D+Y ++F+A E D V SGSY V LPDGR QTV+YTVDGY+G+VADVQY+G Y + PKP+ Y P P Sbjct: 77 SILAYVFLATTVIADSPPLVSYAPSPSYKPAPAPSXQPAPSYKPAPAYQPATYDESPKPYNYQYAVSDDYSGVNFSAEENSDAKVISGSYSVALPDGRIQTVSYTVDGYSGFVADVQYQGTPTYPKYEPKPSSSYKPAP 215 HSP 2 Score: 89.3521 bits (220), Expect = 8.518e-21 Identity = 68/191 (35.60%), Postives = 87/191 (45.55%), Query Frame = 0 Query: 29 ISTTTITRVQLELNIQWDGEDNSSSTDSATLTSNMQTFFALLALAVVVLADNPPPPSYSP-----------------YKPEPKY------EEPAKYEYAYAVQDEYKQLDFNANEERDGYVTSGSYQVLLPDGRTQTVTYTVDGYAGYTFFALLALAVVVLADNPPPPSYSP-----YKPEPKYEEPAKYE 191 I+ I V+ LN+ G + ++ A + LA V+AD+PP SY+P YKP P Y E P Y Y YAV D+Y ++F+A E D V SGSY V LPDGR QTV+YTVDGY+G+ +A V P P Y P YKP P Y Y+ Sbjct: 49 ITIVDIIEVESRLNVSRAGPQGTWELP--------RSILAYVFLATTVIADSPPLVSYAPSPSYKPAPAPSXQPAPSYKPAPAYQPATYDESPKPYNYQYAVSDDYSGVNFSAEENSDAKVISGSYSVALPDGRIQTVSYTVDGYSGF-------VADVQYQGTPTYPKYEPKPSSSYKPAPTYNTAPAYK 224
BLAST of cuticle protein isoform b vs. L. salmonis genes
Match: EMLSAG00000012059 (supercontig:LSalAtl2s:LSalAtl2s85:1250196:1251194:1 gene:EMLSAG00000012059 transcript:EMLSAT00000012059 description:"snap-LSalAtl2s85-processed-gene-11.56") HSP 1 Score: 99.3673 bits (246), Expect = 5.881e-26 Identity = 61/133 (45.86%), Postives = 79/133 (59.40%), Query Frame = 0 Query: 155 FFALLALAVVVLA----DNPPPPSYSPYKP--------------EPKYEEPAK-YEYAYAVQDEYKQLDFNANEERDGYVTSGSYQVLLPDGRTQTVTYTVDGYAGYVADVQYEGEAKYEPHYPKPAPKYPPP 268 F LL +V++ + + P PS +PY P PKYEEPA+ Y + Y V D+Y +F+A E DG +T+GSY+V LPDGR QTV+YTVD Y G+VADVQYEG Y + PKP+P P P Sbjct: 1 MFKLLVASVLLASVYGDHSAPHPSPAPYHPPQPAPYHAPAPSYHSPKYEEPAQPYAFQYGVADDYSGSNFSAEENADGKITTGSYKVALPDGRIQTVSYTVDAYNGFVADVQYEGTPVYPKYEPKPSPYKPAP 133 HSP 2 Score: 82.0333 bits (201), Expect = 1.999e-19 Identity = 66/166 (39.76%), Postives = 83/166 (50.00%), Query Frame = 0 Query: 63 MQTFFALLALAVVVLADNPPPPSYSPYKP--------------EPKYEEPAK-YEYAYAVQDEYKQLDFNANEERDGYVTSGSYQVLLPDGRTQTVTYTVDGYAGYTFFALLALAVVVLADNPPPPSY----SPYKPEPKYEEPAKYEYAYAVQDEYKQLDFNANE 209 + A + LA V + P PS +PY P PKYEEPA+ Y + Y V D+Y +F+A E DG +T+GSY+V LPDGR QTV+YTVD Y G+ +A V P P Y SPYKP P + Y+ A A DE K DF E Sbjct: 2 FKLLVASVLLASVYGDHSAPHPSPAPYHPPQPAPYHAPAPSYHSPKYEEPAQPYAFQYGVADDYSGSNFSAEENADGKITTGSYKVALPDGRIQTVSYTVDAYNGF-------VADVQYEGTPVYPKYEPKPSPYKPAPYHSPSPAYKPAPAYIDEIKS-DFMDRE 159
BLAST of cuticle protein isoform b vs. L. salmonis genes
Match: EMLSAG00000004844 (supercontig:LSalAtl2s:LSalAtl2s2560:13440:35521:-1 gene:EMLSAG00000004844 transcript:EMLSAT00000004844 description:"augustus-LSalAtl2s2560-processed-gene-0.2") HSP 1 Score: 98.2117 bits (243), Expect = 6.765e-25 Identity = 56/105 (53.33%), Postives = 69/105 (65.71%), Query Frame = 0 Query: 169 NPPPPSYSPYKPEPKYEEPAKYEYAYAVQDEYKQLDFNANEERDGYVTSGSYQVLLPDGRTQTVTYTV-DGYAGYVADVQYEGEAKYEPHYP--KPAPKYPPPPP 270 +P P SPY E Y+ PA Y+Y YAV D+Y +F NE RDGY T+G Y+V LPDGRTQ V Y V D Y+GYVADV+YEG+A Y+ + P K A +P P P Sbjct: 133 HPAPTHKSPYHAE-SYDTPAVYQYGYAVADDYAGTNFAQNENRDGYSTAGEYRVGLPDGRTQIVNYNVADAYSGYVADVKYEGQAHYDTYKPVHKHASYHPTPAP 236 HSP 2 Score: 77.0258 bits (188), Expect = 4.494e-17 Identity = 41/76 (53.95%), Postives = 49/76 (64.47%), Query Frame = 0 Query: 80 NPPPPSYSPYKPEPKYEEPAKYEYAYAVQDEYKQLDFNANEERDGYVTSGSYQVLLPDGRTQTVTYTV-DGYAGYT 154 +P P SPY E Y+ PA Y+Y YAV D+Y +F NE RDGY T+G Y+V LPDGRTQ V Y V D Y+GY Sbjct: 133 HPAPTHKSPYHAE-SYDTPAVYQYGYAVADDYAGTNFAQNENRDGYSTAGEYRVGLPDGRTQIVNYNVADAYSGYV 207
BLAST of cuticle protein isoform b vs. L. salmonis genes
Match: EMLSAG00000005113 (supercontig:LSalAtl2s:LSalAtl2s26:142964:143594:1 gene:EMLSAG00000005113 transcript:EMLSAT00000005113 description:"augustus-LSalAtl2s26-processed-gene-1.2") HSP 1 Score: 92.0485 bits (227), Expect = 1.197e-23 Identity = 53/103 (51.46%), Postives = 58/103 (56.31%), Query Frame = 0 Query: 155 FFALLALAVVVLADNPPPPSYSPYKPEPKYEEPAKYEYAYAVQDEYKQLDFNANEERDGYVTSGSYQVLLPDGRTQTVTYTV-DGYAGYVADVQYEGEAKYEP 256 F AL+AL S Y P P YE+PA Y Y Y V D+Y +F +E RDGYVTSG Y V LPDGR QTV Y V D Y GYVADV Y G Y P Sbjct: 7 FSALIALT-----------SAQGYHPTPSYEQPAHYAYNYGVVDDYSGNNFGQSESRDGYVTSGEYHVQLPDGRLQTVNYHVGDAYTGYVADVTYSGTPSYGP 98 HSP 2 Score: 79.337 bits (194), Expect = 8.515e-19 Identity = 44/93 (47.31%), Postives = 50/93 (53.76%), Query Frame = 0 Query: 63 MQTFFALLALAVVVLADNPPPPSYSPYKPEPKYEEPAKYEYAYAVQDEYKQLDFNANEERDGYVTSGSYQVLLPDGRTQTVTYTV-DGYAGYT 154 M+ A AL + A Y P P YE+PA Y Y Y V D+Y +F +E RDGYVTSG Y V LPDGR QTV Y V D Y GY Sbjct: 1 MKILLAFSALIALTSAQG--------YHPTPSYEQPAHYAYNYGVVDDYSGNNFGQSESRDGYVTSGEYHVQLPDGRLQTVNYHVGDAYTGYV 85
BLAST of cuticle protein isoform b vs. L. salmonis genes
Match: EMLSAG00000003353 (supercontig:LSalAtl2s:LSalAtl2s1834:174757:175847:1 gene:EMLSAG00000003353 transcript:EMLSAT00000003353 description:"maker-LSalAtl2s1834-augustus-gene-0.3") HSP 1 Score: 95.5153 bits (236), Expect = 1.923e-23 Identity = 57/111 (51.35%), Postives = 69/111 (62.16%), Query Frame = 0 Query: 169 NPPPPSY---------SPYKPEPKYEE-PAKYEYAYAVQDEYKQLDFNANEERDGYVTSGSYQVLLPDGRTQTVTYTV-DGYAGYVADVQYEGEAKYEPHYPKPAPKYPPP 268 +P PP+Y SPY Y + PA Y+Y YAV D+Y +F ANE RDGY T G Y+V LPDGRTQ V Y V D Y+G VADV+YEG A Y+ + KPAP +P P Sbjct: 164 HPAPPTYHSAPVVHKSSPYHAAESYADTPAVYQYGYAVADDYSGTNFAANENRDGYSTYGEYRVALPDGRTQVVNYNVADAYSGTVADVKYEGTAHYDTY--KPAPYHPAP 272 HSP 2 Score: 73.559 bits (179), Expect = 1.676e-15 Identity = 42/84 (50.00%), Postives = 50/84 (59.52%), Query Frame = 0 Query: 80 NPPPPSY---------SPYKPEPKYEE-PAKYEYAYAVQDEYKQLDFNANEERDGYVTSGSYQVLLPDGRTQTVTYTV-DGYAG 152 +P PP+Y SPY Y + PA Y+Y YAV D+Y +F ANE RDGY T G Y+V LPDGRTQ V Y V D Y+G Sbjct: 164 HPAPPTYHSAPVVHKSSPYHAAESYADTPAVYQYGYAVADDYSGTNFAANENRDGYSTYGEYRVALPDGRTQVVNYNVADAYSG 247
BLAST of cuticle protein isoform b vs. L. salmonis genes
Match: EMLSAG00000005985 (supercontig:LSalAtl2s:LSalAtl2s322:1028992:1029576:1 gene:EMLSAG00000005985 transcript:EMLSAT00000005985 description:"augustus-LSalAtl2s322-processed-gene-9.11") HSP 1 Score: 92.4337 bits (228), Expect = 4.927e-23 Identity = 48/85 (56.47%), Postives = 57/85 (67.06%), Query Frame = 0 Query: 178 YKPEPKYEEPAKYEYAYAVQDEYKQLDFNANEERDGYVTSGSYQVLLPDGRTQTVTYTVDGYAGYVADVQYEGEAKYEPHYPKPA 262 YKP E P Y + Y V D+Y +F+A E DG +TSGSY+V LPDGR QTVTYTVD Y G+VADVQYEG Y + PKP+ Sbjct: 59 YKPTKYKEAPQPYAFQYGVADDYTGSNFSAEENADGKITSGSYKVALPDGRIQTVTYTVDAYNGFVADVQYEGTPVYPKYEPKPS 143 HSP 2 Score: 72.7886 bits (177), Expect = 8.508e-16 Identity = 36/66 (54.55%), Postives = 43/66 (65.15%), Query Frame = 0 Query: 89 YKPEPKYEEPAKYEYAYAVQDEYKQLDFNANEERDGYVTSGSYQVLLPDGRTQTVTYTVDGYAGYT 154 YKP E P Y + Y V D+Y +F+A E DG +TSGSY+V LPDGR QTVTYTVD Y G+ Sbjct: 59 YKPTKYKEAPQPYAFQYGVADDYTGSNFSAEENADGKITSGSYKVALPDGRIQTVTYTVDAYNGFV 124
BLAST of cuticle protein isoform b vs. L. salmonis genes
Match: EMLSAG00000012577 (supercontig:LSalAtl2s:LSalAtl2s937:136997:140196:1 gene:EMLSAG00000012577 transcript:EMLSAT00000012577 description:"augustus-LSalAtl2s937-processed-gene-0.11") HSP 1 Score: 91.2781 bits (225), Expect = 7.263e-23 Identity = 48/80 (60.00%), Postives = 56/80 (70.00%), Query Frame = 0 Query: 191 EYAYAVQDEYKQLDFNANEERDGYVTSGSYQVLLPDGRTQTVTYTV-DGYAGYVADVQYEGEAKYEPHYPKPAPKYPPPP 269 +Y YAV DEY L+F A+E RDGY T+G Y V LPDGR QTV+Y V D Y+GYVADV Y GE +Y P+ K AP Y P P Sbjct: 80 QYQYAVSDEYAGLNFGADEARDGYSTNGKYSVALPDGRIQTVSYNVADAYSGYVADVTYSGEPQYAPY--KSAPAYKPAP 157 HSP 2 Score: 72.0182 bits (175), Expect = 8.157e-16 Identity = 42/85 (49.41%), Postives = 52/85 (61.18%), Query Frame = 0 Query: 102 EYAYAVQDEYKQLDFNANEERDGYVTSGSYQVLLPDGRTQTVTYTV-DGYAGYTFFALLALAVVVLADNPPPPSYSPYKPEPKYE 185 +Y YAV DEY L+F A+E RDGY T+G Y V LPDGR QTV+Y V D Y+GY +A V + P Y+PYK P Y+ Sbjct: 80 QYQYAVSDEYAGLNFGADEARDGYSTNGKYSVALPDGRIQTVSYNVADAYSGY-------VADVTYSGE---PQYAPYKSAPAYK 154
BLAST of cuticle protein isoform b vs. SwissProt
Match: gi|75026432|sp|Q9V7U0.1|RESIL_DROME (RecName: Full=Pro-resilin; Flags: Precursor) HSP 1 Score: 66.2402 bits (160), Expect = 4.056e-11 Identity = 35/69 (50.72%), Postives = 43/69 (62.32%), Query Frame = 0 Query: 185 EEPAKYEYAYAVQDEYKQLDFNANEERDGYVTSGSYQVLLPDGRTQTVTYTVDGYAGYVADVQYEGEAK 253 +EPAKYE+ Y V+D L F +E RDG T+G Y VLLPDGR Q V Y D GY ++YEG+A Sbjct: 340 DEPAKYEFNYQVEDAPSGLSFGHSEMRDGDFTTGQYNVLLPDGRKQIVEYEAD-QQGYRPQIRYEGDAN 407 HSP 2 Score: 59.3066 bits (142), Expect = 8.204e-9 Identity = 29/53 (54.72%), Postives = 34/53 (64.15%), Query Frame = 0 Query: 96 EEPAKYEYAYAVQDEYKQLDFNANEERDGYVTSGSYQVLLPDGRTQTVTYTVD 148 +EPAKYE+ Y V+D L F +E RDG T+G Y VLLPDGR Q V Y D Sbjct: 340 DEPAKYEFNYQVEDAPSGLSFGHSEMRDGDFTTGQYNVLLPDGRKQIVEYEAD 392
BLAST of cuticle protein isoform b vs. nr
Match: gi|225714206|gb|ACO12949.1| (Cuticle protein 7 [Lepeophtheirus salmonis]) HSP 1 Score: 88.5817 bits (218), Expect = 3.149e-18 Identity = 56/126 (44.44%), Postives = 65/126 (51.59%), Query Frame = 0 Query: 153 YTFFALLALAVVVLADNPPP---PSYSP--YKPEPKYEEPAKYEYAYAVQDEYKQLDFNANEERDGYVTSGSYQVLLPDGRTQTVTYTVDGYAGYVADVQYEGEAKYEPHYPK-----PAPKYPPP 268 + F V D+P P P + YKP P E P Y + Y V D+Y F A E D +GSYQV LPDGR QTVTYT D YAG+VADV+YEG Y + PK PAP P P Sbjct: 2 FHFIVACTFLASVFGDHPAPHPAPYHQAPAYKPAPYDESPKPYAFQYGVSDDYSGTKFTAQENSDAKTVAGSYQVALPDGRIQTVTYTADDYAGFVADVKYEGVPTYPKYEPKSSAYRPAPYKPAP 127 HSP 2 Score: 73.1738 bits (178), Expect = 1.830e-12 Identity = 53/138 (38.41%), Postives = 61/138 (44.20%), Query Frame = 0 Query: 63 MQTFFALLALAVVVLADNPPP---PSYSP--YKPEPKYEEPAKYEYAYAVQDEYKQLDFNANEERDGYVTSGSYQVLLPDGRTQTVTYTVDGYAGYTFFALLALAVVVLADNPPPPSY---------SPYKPEPKYEE 186 M F V D+P P P + YKP P E P Y + Y V D+Y F A E D +GSYQV LPDGR QTVTYT D YAG+ +A V P P Y +PYKP P Y Sbjct: 1 MFHFIVACTFLASVFGDHPAPHPAPYHQAPAYKPAPYDESPKPYAFQYGVSDDYSGTKFTAQENSDAKTVAGSYQVALPDGRIQTVTYTADDYAGF-------VADVKYEGVPTYPKYEPKSSAYRPAPYKPAPVYHS 131
BLAST of cuticle protein isoform b vs. nr
Match: gi|1214785061|gb|ASK05861.1| (chitin-binding protein [Macrobrachium nipponense]) HSP 1 Score: 87.8113 bits (216), Expect = 3.462e-18 Identity = 56/120 (46.67%), Postives = 70/120 (58.33%), Query Frame = 0 Query: 154 TFFALLALAVVVLAD-----NPPPPSYSPYKPEPKYEEPAKYEYAYAVQDEYKQLDFNANEERDGYVTSGSYQVLLPDGRTQTVTYTVDGYAGYVADVQYEGEAKYEPHYP----KPAPK 264 T LLA+ V AD + P PSY + P P PA+Y + YAV+D+Y DF E R+GY T GSY V LPDGR Q V Y V G +GY+A V Y+GEA+Y + P +PAPK Sbjct: 4 TVIVLLAVMAVASADPVTSYHAPAPSY--HAPAPA--GPAQYNFNYAVKDDYSGNDFGHEEGRNGYDTQGSYYVQLPDGRLQKVDYVVKGDSGYLAQVNYQGEAQYAKYQPSQAYQPAPK 119 HSP 2 Score: 70.0922 bits (170), Expect = 1.888e-11 Identity = 44/94 (46.81%), Postives = 53/94 (56.38%), Query Frame = 0 Query: 65 TFFALLALAVVVLAD-----NPPPPSYSPYKPEPKYEEPAKYEYAYAVQDEYKQLDFNANEERDGYVTSGSYQVLLPDGRTQTVTYTVDGYAGY 153 T LLA+ V AD + P PSY + P P PA+Y + YAV+D+Y DF E R+GY T GSY V LPDGR Q V Y V G +GY Sbjct: 4 TVIVLLAVMAVASADPVTSYHAPAPSY--HAPAPA--GPAQYNFNYAVKDDYSGNDFGHEEGRNGYDTQGSYYVQLPDGRLQKVDYVVKGDSGY 93
BLAST of cuticle protein isoform b vs. nr
Match: gi|321472827|gb|EFX83796.1| (hypothetical protein DAPPUDRAFT_239749 [Daphnia pulex]) HSP 1 Score: 89.3521 bits (220), Expect = 3.631e-18 Identity = 56/108 (51.85%), Postives = 69/108 (63.89%), Query Frame = 0 Query: 155 FFALLALAVVVLADNPPPPSYSP------YKP--EPKYEEPAKYEYAYAVQDEYKQLDFNANEERDGYVTSGSYQVLLPDGRTQTVTYTVDGYAGYVADVQYEGEAKY 254 FF L AL VV AD+ Y+P YK E KYE P Y++++AV D Y D+ ++ DG VT+GSY+V+LPDGRTQ VTY D Y GYVADV+Y GEAKY Sbjct: 3 FFILTALFAVVAADSYRSAEYAPKYEAPAYKSTYEAKYETPQPYDFSWAVNDYYN--DYEHSKSSDGKVTTGSYRVVLPDGRTQIVTYKADSY-GYVADVKYTGEAKY 107 HSP 2 Score: 70.0922 bits (170), Expect = 4.563e-11 Identity = 44/93 (47.31%), Postives = 56/93 (60.22%), Query Frame = 0 Query: 66 FFALLALAVVVLADNPPPPSYSP------YKP--EPKYEEPAKYEYAYAVQDEYKQLDFNANEERDGYVTSGSYQVLLPDGRTQTVTYTVDGY 150 FF L AL VV AD+ Y+P YK E KYE P Y++++AV D Y D+ ++ DG VT+GSY+V+LPDGRTQ VTY D Y Sbjct: 3 FFILTALFAVVAADSYRSAEYAPKYEAPAYKSTYEAKYETPQPYDFSWAVNDYYN--DYEHSKSSDGKVTTGSYRVVLPDGRTQIVTYKADSY 93
BLAST of cuticle protein isoform b vs. nr
Match: gi|1325268244|ref|XP_023345077.1| (cuticle protein 7-like [Eurytemora affinis]) HSP 1 Score: 88.1965 bits (217), Expect = 3.684e-18 Identity = 48/73 (65.75%), Postives = 51/73 (69.86%), Query Frame = 0 Query: 181 EPKYEE-PAKYEYAYAVQDEYKQLDFNANEERDGYVTSGSYQVLLPDGRTQTVTYTV-DGYAGYVADVQYEGE 251 EP Y + P Y Y YAV D+Y FNA E RDGY TSGSY V LPDGR QTVTYTV D Y+GYVADV Y GE Sbjct: 37 EPAYADVPPVYAYNYAVADDYSGSKFNAGENRDGYATSGSYSVSLPDGRIQTVTYTVSDAYSGYVADVTYSGE 109 HSP 2 Score: 75.0998 bits (183), Expect = 3.341e-13 Identity = 41/64 (64.06%), Postives = 44/64 (68.75%), Query Frame = 0 Query: 92 EPKYEE-PAKYEYAYAVQDEYKQLDFNANEERDGYVTSGSYQVLLPDGRTQTVTYTV-DGYAGY 153 EP Y + P Y Y YAV D+Y FNA E RDGY TSGSY V LPDGR QTVTYTV D Y+GY Sbjct: 37 EPAYADVPPVYAYNYAVADDYSGSKFNAGENRDGYATSGSYSVSLPDGRIQTVTYTVSDAYSGY 100
BLAST of cuticle protein isoform b vs. nr
Match: gi|321460568|gb|EFX71609.1| (hypothetical protein DAPPUDRAFT_255533 [Daphnia pulex]) HSP 1 Score: 88.5817 bits (218), Expect = 5.156e-18 Identity = 61/134 (45.52%), Postives = 73/134 (54.48%), Query Frame = 0 Query: 154 TFFALLALAVVVLADNPPPPSYSPYKPEPKYEEPA-------------KYEYAYAVQDEYKQLDFNANEERD--GYVTSGSYQVLLPDGRTQTVTYTVDGYAGYVADVQYEGEAKYEPHYP----KPAPKYPPP 268 F L A + +A N Y P+P Y PA Y +A+AV+D+Y D+ E D GYV SGSY+ LLPDGRTQTVTY D Y+GYVADV+Y+GEAKY Y KPAP YP P Sbjct: 3 VLFVLAAALIATVASNA-------YYPKPAYPAPAYPSYSKSYDYAAMPYSFAWAVKDDYTYNDYAHQETADDKGYV-SGSYRTLLPDGRTQTVTYKADDYSGYVADVKYDGEAKYPAEYKPSAYKPAPAYPSP 128 HSP 2 Score: 68.5514 bits (166), Expect = 1.172e-10 Identity = 55/141 (39.01%), Postives = 66/141 (46.81%), Query Frame = 0 Query: 63 MQTFFALLALAVVVLADNPPPPSYSPYKPEPKYEEPA-------------KYEYAYAVQDEYKQLDFNANEERD--GYVTSGSYQVLLPDGRTQTVTYTVDGYAGYTFFALLALAVVVLADNPPPPSYSPYKPEPKYEEPA 188 MQ F L A + +A N Y P+P Y PA Y +A+AV+D+Y D+ E D GYV SGSY+ LLPDGRTQTVTY D Y+GY A+ P S YKP P Y PA Sbjct: 1 MQVLFVLAAALIATVASNA-------YYPKPAYPAPAYPSYSKSYDYAAMPYSFAWAVKDDYTYNDYAHQETADDKGYV-SGSYRTLLPDGRTQTVTYKADDYSGYVADVKYDGEAKYPAEYKP----SAYKPAPAYPSPA 129 The following BLAST results are available for this feature:
BLAST of cuticle protein isoform b vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 25
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BLAST of cuticle protein isoform b vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 1
BLAST of cuticle protein isoform b vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold57_size444674:409794..415762- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold57_size444674-snap-gene-3.29 ID=maker-scaffold57_size444674-snap-gene-3.29|Name=cuticle protein isoform b|organism=Tigriopus kingsejongensis|type=gene|length=5969bp|location=Sequence derived from alignment at scaffold57_size444674:409794..415762- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'cuticle protein isoform b' has the following synonyms
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