xk-related protein, maker-scaffold580_size130538-snap-gene-0.24 (gene) Tigriopus kingsejongensis

Overview
Namexk-related protein
Unique Namemaker-scaffold580_size130538-snap-gene-0.24
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of xk-related protein vs. L. salmonis genes
Match: EMLSAG00000010118 (supercontig:LSalAtl2s:LSalAtl2s668:62836:66990:1 gene:EMLSAG00000010118 transcript:EMLSAT00000010118 description:"maker-LSalAtl2s668-augustus-gene-0.12")

HSP 1 Score: 266.544 bits (680), Expect = 1.463e-82
Identity = 172/480 (35.83%), Postives = 256/480 (53.33%), Query Frame = 0 
Query:    9 CLLKAQMVMG-IVFGLWNNITTVINAKNLFEKGHAVFGWLCLFFLMFPGLVTSVGFLILHFLGHR-KIGKIPPGSVLLYCGLFLFFYPVVPIALCGYTLITGRKRHLAALAKLFEGFLDDGPQFVLKLIVVVFYQI------ADIIFTISMVTSFIALVFFGLSFNELNTNRVVRIWLCLPMLAAFAGARAFTLAVFLKETL-ANTTEWVGGVFVLALFCLINVGWFKYCGQDLIRSVVFGLCSLLIPAGYNNIAYFYQCPDQALIVHSINPTECQVGQRIVERYGDDGSKSRLARKNTLLDDVEAEAFPGSKGNPCPDEVFGNDTEMTLTPSAPPLEPPEGGEDAQTEMRGERNPQRLGSVVIDSDLSEMKSGRFLILYTLSNALLIAGCAVYLTTSRDLDAESDDALILPLLLAVVPGTFFALARSLLLPDLKP----SRVPPKVWKPIKITLCLILSVVAYCSLGPAIFWSTLYKLL 475
            C+ K ++++G ++FGLWNN+ TVINA  L +KGH     L +F+L FPG++TS  +LI+    ++ + G +    ++L   L LF YP++P   C  ++ + R        KL EGF+DDGPQFVLKLI+V  Y+I       DIIF +SM TSF ++VF+G+ FNE  T   ++++L LPM +    +R+FTL+VFLKET+  ++++ + G+ V  ++   N+  F   GQD IRSV+FG  SL+IPAGYNN+  +YQ P Q L        E  VG  I  +   D + +      TL       + P       P+E   ND                G  D + +  G RN               MKSG FL+++  ++  L+    +YL  S+ L   S DALILP  L ++PG FF LAR++L   L+          K WK +   L +  +V+ Y SL PA  W+ ++KL+
Sbjct:  185 CIAKLRLIVGGLIFGLWNNVGTVINAITLSKKGHHSMSALTIFWLFFPGIITSGAYLIIRICKYKSEGGSLSLPGLILRVSLLLFCYPILPFTYCILSIWSDRYVSTYKFLKLLEGFMDDGPQFVLKLIIVTLYEIGLGREKGDIIFLLSMFTSFGSIVFYGIRFNEPFTKWYIKLFLLLPMYSTSVLSRSFTLSVFLKETIHKDSSDLLIGITVFIIYVCANIVAFYVAGQDKIRSVIFGCSSLIIPAGYNNVKEYYQKPGQPL-------GESLVGAGISNKSSSDDNHT--PESATLFLQFSISS-PSEDRYQRPEENLEND----------------GTADNEND-DGSRN---------------MKSGLFLLIHNFADVFLLFSATIYLYFSKKLSETSLDALILPQFLCIIPGFFFVLARAVLYKXLRSRCCDEAYGYKFWKILVGFLSVGFTVIGYASLVPASLWTIIWKLV 622
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BLAST of xk-related protein vs. L. salmonis genes
Match: EMLSAG00000010689 (supercontig:LSalAtl2s:LSalAtl2s709:1008142:1009942:-1 gene:EMLSAG00000010689 transcript:EMLSAT00000010689 description:"snap_masked-LSalAtl2s709-processed-gene-9.28")

HSP 1 Score: 47.7506 bits (112), Expect = 8.573e-7
Identity = 21/59 (35.59%), Postives = 38/59 (64.41%), Query Frame = 0 
Query:  142 IADIIFTISMVTSFIALVFFGLSFNELNTNRVVRIWLCLPMLAAFAGARAFTLAVFLKE 200
            I + I ++S +TSFI L+   L FN+  T  +++I++C+P+ +  A A+   L ++LKE
Sbjct:   13 IGNTIISLSTMTSFIGLIRTVLQFNDRRTGLLIKIFVCIPLYSTSALAKGLALGLYLKE 71
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BLAST of xk-related protein vs. nr
Match: gi|1325309323|ref|XP_023336286.1| (uncharacterized protein LOC111707414 [Eurytemora affinis])

HSP 1 Score: 236.113 bits (601), Expect = 7.682e-69
Identity = 170/502 (33.86%), Postives = 250/502 (49.80%), Query Frame = 0 
Query:    1 MMGCCSQSCLLKAQMVMGIVFGLWNNITTVINAKNLFEKGHAV--FGWLCLFFLMFPGLVTSVGFLILHFLGHRKIGKIPPGSVLLYCGLFLFFYPVVPIALCGYTLITGRKRHL--AALAKLFEGFLDDGPQFVLKLIVVVF--------YQIADIIFTISMVTSFIALVFFGLSFNELNTNRVVRIWLCLPMLAAFAGARAFTLAVFLKETLANTTEWVGG---VFVLALFCLINVGWFKYCGQDLIRSVVFGLCSLLIPAGYNNIAYFYQCPDQALIVHSINPTECQVGQRIVERYGDDGSKSRLARKNTLLDDVEAEAFPGSKGNPCPDEVFGNDTEMTLTPSAPPLEPPEGGEDAQTEMRGERNPQRLGSVVIDSDLSEMKSGRFLILYTLSNALLIAGCAVYLTTSRDLDAESDDALILPLLLAVVPGTFFALARSLL-LPDLK--------PSRVPPKVWKPIKITLCLILSVVAYCSLGPAIFWSTLYKLLKTV 478
            M   CSQ   L   +++ I+    N + T IN  N F K  +    G   LF L  PG+V S GF+IL+F G + I K+ P  ++ Y    L F+PV+P+ L  Y+LI     H   A LA+L   FLD GPQFV++++VVV         Y   D++F ISM++SF++L+   L FNE  ++ V+ I++C PM +A   +RAFTLAVFL++ L     W      + V+ L  L N+G F++CGQD IRSVVF L S+L+PAGYNN   +YQ P+Q L+                       ++S +     L  DV   A  GS+                +T        PEG E      + E              L  M SG++L+ + L N +L+  C++Y+  S  LD + DDAL+LP +L  +PG  FA+ RS L   +L           RV     K  K+ + +I + + +CSL PAI W+  +K + ++
Sbjct:    1 MAVSCSQILRLCRLVILDILLSSVNLVLTFINI-NQFLKSESTRSIGLFSLFLLWLPGIVASGGFVILYFRGKKAISKLLPWKLVSYPLTLLIFFPVLPVVLTVYSLIRKDDEHYQRARLARLVSSFLDHGPQFVVRVVVVVLSGLPHRGIYDKGDVVFIISMISSFLSLILSALVFNERKSSYVLWIFVCTPMFSAILASRAFTLAVFLRQVLQVEAPWYQQMICILVVVLMILSNIGLFRWCGQDWIRSVVFSLSSVLLPAGYNNDPEYYQLPNQNLL----------------------SNRSLVKPLPRLRRDVIETAELGSQ---------------VVTTG------PEGEEGVNITEKEEF-------------LEPMNSGKYLLSHILVNTVLLGTCSLYVYFSSKLDIKEDDALVLPQVLCAIPGLLFAIGRSFLHFHELTQYQDNGTLSERVSGSCQKGTKLAMAIIFTGLGFCSLIPAILWTLFFKFISSL 445
The following BLAST results are available for this feature:
BLAST of xk-related protein vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 2
Match NameE-valueIdentityDescription
EMLSAG000000101181.463e-8235.83supercontig:LSalAtl2s:LSalAtl2s668:62836:66990:1 g... [more]
EMLSAG000000106898.573e-735.59supercontig:LSalAtl2s:LSalAtl2s709:1008142:1009942... [more]
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BLAST of xk-related protein vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of xk-related protein vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 1
Match NameE-valueIdentityDescription
gi|1325309323|ref|XP_023336286.1|7.682e-6933.86uncharacterized protein LOC111707414 [Eurytemora a... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold580_size130538supercontigscaffold580_size130538:67286..71698 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
Note-
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold580_size130538-snap-gene-0.24-mRNA-1maker-scaffold580_size130538-snap-gene-0.24-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold580_size130538:67286..71698+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold580_size130538-snap-gene-0.24 ID=maker-scaffold580_size130538-snap-gene-0.24|Name=xk-related protein|organism=Tigriopus kingsejongensis|type=gene|length=4413bp|location=Sequence derived from alignment at scaffold580_size130538:67286..71698+ (Tigriopus kingsejongensis)
CACCCTGGAAATAGTCGAGCGCACGCGCATATCAACAAACAAGGCCTGTT
TACGTTCGTGGAGGAGGCGTTAGGCCTAATTGAAGGCCCATTTTCCTGGA
ACACCACTCGAGTGTGAAAACAGGGTGTGACCCTCCCAGGAGCTATGCGT
GCGTGAATGAGCCTGGATCGCCATGATGGGGTGCTGCTCCCAATCCTGCC
TGCTCAAGGCTCAAATGGTGATGGGGATCGTATTTGGGCTTTGGAACAAC
ATCACGACCGTCATTAACGCCAAGAATCTGTTCGAGAAAGGCCATGCCGT
TTTTGGGTGGCTCTGTCTGTTTTTCCTCATGTTCCCCGGCTTGGTCACCT
CCGTGGGCTTCCTAATCCTCCACTTTTTGGGGCATCGCAAGATCGGAAAA
ATCCCCCCGGGATCCGTCCTTTTGTACTGCGGCCTCTTCCTCTTCTTCTA
CCCCGTCGTTCCCATTGCCTTGTAAGCATACGCGAGCCTCGGTCATATGT
AACCCCAAAAGCCGTGGAGCTGTCTTGGGTGACCGGTCAGGCCCATAGCC
ATCCAAATTAACATGTTCTTGCCTCTTAGATGTGGCTACACCTTAATCAC
GGGACGAAAGCGCCATTTGGCAGCTTTGGCCAAACTGTTTGAGGGCTTTC
TCGACGATGGACCTCAATTCGTTCTCAAACTGATCGTGGTGGTGTTTTAT
CAAATCGGTATAGGCCCAGGCCAAGGCAAGTTCCATAGGCTCCACGATTG
CACGGTTTGAAGGAAACTTAACTATAATGGCATGCACATTGCAGCGGACA
TCATATTCACCATATCCATGGTGACCTCCTTCATAGCCCTGGTCTTCTTT
GGTCTGTCCTTCAACGAGTTGAACACGAACCGAGTGGTCCGAATTTGGTT
GTGTTTACCCATGTTGGCGGCCTTTGCCGGGGCTCGGGCATTTACCCTGG
CCGTGTTCCTCAAGGAAACCCTCGCCAACACCACCGAATGGGTGGGTGGG
GTCTTCGTTCTGGCCTTGTTCTGCCTCATCAACGTGGGCTGGTTCAAGTA
AGGCATGCCCCTGAGACTCGTCCTGTGCTGAAATTGAATTTGATATTCGC
CTTAGATACTGCGGACAGGATCTCATTCGAAGTGTGGTGTTCGGCCTCTG
CAGCCTCCTCATCCCGGCTGGATACAACAATATCGCCTATTTTTACCAAT
GTCCCGATCAGGCTCTGATTGTTCATTCCATCAACCCCACTGAATGTCAA
GTGGGTCAGAGGATCGTGGAACGCTACGGGGATGACGGAAGCAAAAGTCG
GCTAGCGCGCAAGAACACCTTGCTAGACGACGTTGAGGCTGAGGCCTTTC
CAGGTATGGTGCATTCGTTCTATTCACGCGGAAAATATCATCAGACAGAG
CATCATTGTACACAATCTCAGGCAGCTGTGGGTTGATATCCGTAGCTAGT
CTCTTTTGATGTTGTATCCACCGGCTCCTCCTTGGCTCCAAAATGCAATT
GTCAATAGTCATCCGCCTCGACCGCCTCGTGTTCATGCAGATACTTGAAT
GGCGTAAGTACGTGACAAGTACTTAGGGTGGCAGACTCATCGTTGGTTGG
ATCGTCACTCAGCATAGTTGGAAAGATGGCATTTGCTTACCTTCACGCTG
GTGGGGATCAACTGATGATGATTCCAGGTCGATTTCGATGTGCGAAATGG
GGTGGGCCCTGAAATACTCGGCATTATTTCGTCCATCCCCACCCCTTTAA
GTGGCTCCTCACATATCCATAAGATATCCTTAAGGATATTTTCTCCACTC
CGGTTGTATGGCAAAGTCAGTGATCTGCTCCATTCTAGTGACCATGTCCC
AAAACAGTTCTTCCACGACGTCCTGGGAGAGTTGAGATCCTTCCAAGCCT
GAGAACTAATCAAACAGAGAATTCAATCAGATTCCCTTATCAGACAGACT
CTTCCAACACAGCAAACGCAAGGAAGGACACAGCTGTCCAATTTGGCCTG
CCTAATTTGATAAAATTGCATTTCAGGATCCAAAGGCAACCCATGTCCCG
ATGAGGTGTTCGGGAATGACACTGAAATGACACTAACTCCCTCAGCACCA
CCTCTTGAGCCTCCCGAGGGCGGAGAGGATGCCCAAACAGAGATGCGAGG
TGAACGAAATCCCCAGCGATTAGGCTCAGTGGTGATCGATTCTGACCTAT
CTGAGATGAAGAGTGGGCGTTTTCTCATCTTGTACACCCTTTCCAATGCA
CTTCTCATCGCTGGCTGTGCTGTCTATCTCACAACATCGCGCGATTTGGA
TGCCGAATCGGACGATGCACTGATTTTGCCGCTCCTTTTGGCCGTTGTTC
CAGGTACGATGCAAGTAAAACACTAGAGGTGAACTAATGTCACCCATGGA
CTGGATAATGTTGTAGATGGGCATTGGAATGTTCCATGATACATGTACTG
TACAGTGCATACTTTCACTTTCTTATACCGGTATGCATTTGGAGAGCCAA
TAACTTAAGGGAGAGGCTAGATGATTGCGGTCAAAGGTGGTGGTTAAAGA
GATGATGTCACACTTCATATTTAAAGTTATGACGCAAAAATCGCCCAAAA
CTTCAAACCAATGGAAAAACATCGTTCCGAGAGATGGATATCTTTTTTCC
CTTGCAAAATGACCAGTATGACCAGACAAGCAGCCTGGTGCAACGGGAAA
GTGGGATAATGAAAATAATTCCTGAAATGTCCGTCCCTCAATGTCTGAGG
ATACAACCTTCGTGTTAAAAAAGTTAAATGTTATGTAGTTGCCATTAGAT
ATTTACAAACATTTTATAGAGAGGGGATTAGCAACTGAACCTGCTGGCCG
CAGTGGACGTGGTCCACTTCCTAAGCGAGAGGGAATAGTGCTGGCTTCGC
ACATACTTCAGTGTGGTAACGAGCTAGCAATAACTGCAAGAGTAAGCCGC
GATTCCGGAATGCAGAGTTTGGGTGAATTTTAACCGCATCTAATCATTGT
CTTCTGCTCTAAAAATGACCAATTGGTTACTTAGCGGCTGTTCTTATTCT
CCTCAAACCGGTAATTTAATCCAATTTTGTCGAAATTTGGGCACTCTGGT
TTTCCCACCAATATTTCGGTTTCTGTCGTATTCCCAACCCAGTTTCGGTT
TCGGCCGGAATCGGCAAGTGAGATTGAAATGAACTCCCTCAAAGGGTGTT
TTGAATTCGAGTTTGCCCGATTCAATCAGGAACTTTTCTTCTCGTGTTTC
GGAAGTTTATCGTCACCTCTCTCCCTTTGTAGGGACTTTTTTCGCTTTGG
CCCGCTCTCTGCTTCTCCCTGATCTCAAACCAAGCCGAGTACCTCCGAAA
GTATGGAAGCCCATCAAAATAACGCTGTGTCTCATCTTGAGCGTTGTGGC
GTACTGCTCCTTGGGACCTGCAATATTCTGGAGCACACTCTACAAGCTGC
TGAAGACTGTGGACACAACCATTGGAGGAGACTGAATCCAATCGCCTGGC
TTCGCATCACCAAAGAATCTTTTTGCATTTTTGCTCACCCATATCGCTTT
TTTGCTCACTACATAAATGTACACACAGTCAAATCCTACTAGGCTAGTCT
GCTTTGGCTTAAGGCAGAAGCCTGCCTGAATTTGCTTTCCCTGCCACCCA
CCATCCACTTTGGGCTCGATCCTTCATCATCTTGTTATGATTAGTCTTGC
CATTATGATGTCAAGGTTAGCAGCACCCCATTACAGAAACTAACTCAATC
GGCAGGGCAATTCATCATCTCCCCCTAAGAGCCCCTTGTCAGAAATTGAG
AGAGACCAACTCATCGTTTCACCTTTTTTGAGTCGACAACAACGCTGAGG
TTGTCAAGCTTCTGGTAAATGGAAGACTGCTCTATCCTCTGGGAGGAGGT
GTCAATGTACTCTTTATGCAATGCTTAAGCTTGTTCACACAATTTGTGTG
CTCGCAAACAATGACTGTTTGAGCTCTCTTCAAGGCTCCTTTAGAATTAG
GGGACAATGATCTGCCGAGGGATTTCCAAGCTTTAAAGGAGGCATTCGGG
CCGTAAGAAAACCAAATCAAAATGGAAAACCCCACGACGTTCTGGATTCT
GAGCTCATCGCACAAGATGGTTCTCAGCCAATTGCGAAACCACGGATGTA
AATAATGCTTCAAACTCAGACCTTGTGGACTTGGAAACTTGGAAGGACTT
TCTAACGACAAGCTTGGTCAATCATCTCTTGGGTTAGCCAATACTGGAAT
ACGTTTTGCTTTCGGCTGATAATAAAGAAATCATTCAAATCAAATTGTAG
TTCGTCGTAGTTTACACCACTTTTTTCAAATGGGGTTACATTAAACATTC
ATAAAAAAGGCTTTCTTGTTAGCATTTTTCTTTATTGAACCCATTAATAT
CTGTATTAAATTG
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Synonyms
The feature 'xk-related protein' has the following synonyms
Synonym
Tk07483
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