acetone carboxylase subunit beta, maker-scaffold589_size129586-snap-gene-0.34 (gene) Tigriopus kingsejongensis

Overview
Nameacetone carboxylase subunit beta
Unique Namemaker-scaffold589_size129586-snap-gene-0.34
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of acetone carboxylase subunit beta vs. L. salmonis genes
Match: EMLSAG00000005723 (supercontig:LSalAtl2s:LSalAtl2s309:690667:692802:-1 gene:EMLSAG00000005723 transcript:EMLSAT00000005723 description:"maker-LSalAtl2s309-augustus-gene-7.90")

HSP 1 Score: 54.299 bits (129), Expect = 1.074e-8
Identity = 47/182 (25.82%), Postives = 93/182 (51.10%), Query Frame = 0 
Query:   97 YLSVARLTESVAELTEHRTRSE-------KYLQFLQEKHQYNANMSTEIRNLREATKIQHQHPVGLDGEKNAANGK----KELQSKIREFIKSYKTIKTFLGELLVQISPEQNEGEGSLLAHLLQALWTLSFS---ASGPDAYLTLSQFAQRVEPRDVNLLVTNEIVERDPDNPDRVRMINF 264
            +L++A + +++  L E +  SE       ++++ +    Q   ++  E R   E +K+      G +G+++   G+    K+L++ IR+   +YK IK+     L +I    +  E + +   LQALWT S++   ++   +YL +S     V   DV+ LV+  I+   PD+PD+V+++ F
Sbjct:  427 FLAIAGMQKNIQNLRELKQMSEHILSNNMEHIKEMDNIVQLRDSIDHECREKMEKSKVDK----GNEGDQSRPEGEAETIKDLEANIRDTRAAYKHIKSEFAAFLERI----DHNEINQIGMFLQALWT-SYAKNVSNDESSYLRISHLDFDVNQNDVSKLVSEGIITAHPDDPDQVKLMRF 599
The following BLAST results are available for this feature:
BLAST of acetone carboxylase subunit beta vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAG000000057231.074e-825.82supercontig:LSalAtl2s:LSalAtl2s309:690667:692802:-... [more]
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BLAST of acetone carboxylase subunit beta vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of acetone carboxylase subunit beta vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold589_size129586supercontigscaffold589_size129586:10144..11082 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
NoteF:N-methylhydantoinase (ATP-hydrolyzing) activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold589_size129586-snap-gene-0.34-mRNA-1maker-scaffold589_size129586-snap-gene-0.34-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold589_size129586:10144..11082+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold589_size129586-snap-gene-0.34 ID=maker-scaffold589_size129586-snap-gene-0.34|Name=acetone carboxylase subunit beta|organism=Tigriopus kingsejongensis|type=gene|length=939bp|location=Sequence derived from alignment at scaffold589_size129586:10144..11082+ (Tigriopus kingsejongensis)
AGGACTGGCAACCATGACGTCCATCGTCGATGAAGATGACCCCGAGATGG
GCATCCTCGCCGAATTGGCCCGCAAGCTGATGGAGATCCAGAGCGAAGGT
CAAGCCCTGGATGACGAGATTATCAGCCTGTCCGAATCCGACGAGTACAA
GGAGGCCATCCGCAATGAGAGAGACATCCATGGCCCGGTCACCAAAGTTG
TCAAGGACGACGTGGACTCAGCCTCTGGGATGGTGTATCATTTGAAGAAA
AGTGTGCCCGAAGGTATGGGATGAGCGTGCTCCCAGGAGGGTGTGTCTCG
CGCATTGTATCAAAGTATCCTTCCCTGCAGGTCACATCGAAGACCCCATG
CTGCACAAGTACTTGAGTGTAGCGAGACTGACAGAAAGCGTCGCCGAATT
GACGGAGCATCGAACGAGAAGCGAAAAGTATCTCCAATTCCTCCAGGAAA
AGCACCAATGTAAGGCGGGCTCAATCAAAACGAGGAATGATTGACGTCGA
AGCTGAGCCACTCTTTTCAGATAATGCCAACATGTCGACCGAGATCAGGA
ACCTCCGAGAAGCCACCAAGATCCAACACCAGCATCCTGTTGGACTCGAT
GGCGAGAAGAATGCGGCGAACGGGAAAAAGGAGCTTCAGAGCAAGATACG
CGAGTTCATCAAATCCTACAAGACCATCAAGACGTTCCTCGGCGAGCTGC
TCGTTCAAATTTCGCCCGAACAAAACGAGGGCGAAGGCAGCTTATTGGCC
CACCTCCTCCAAGCGCTCTGGACGCTCTCGTTCAGTGCCTCGGGGCCGGA
CGCCTACTTGACCCTCTCGCAATTCGCCCAACGTGTCGAGCCCCGAGATG
TGAATCTACTAGTTACGAACGAGATCGTTGAGCGGGATCCAGACAATCCA
GACCGAGTGAGGATGATCAATTTTGTCGACAATCTTTAA
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Synonyms
The feature 'acetone carboxylase subunit beta' has the following synonyms
Synonym
Tk07330
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