atp-binding cassette sub-family c member 11- partial, maker-scaffold605_size125465-snap-gene-0.26 (gene) Tigriopus kingsejongensis
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Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of atp-binding cassette sub-family c member 11- partial vs. nr
Match: gi|586962530|gb|AHK05653.1| (ATP-binding cassette transporter sub-family C member 5 [Tigriopus japonicus]) HSP 1 Score: 151.369 bits (381), Expect = 5.977e-40 Identity = 76/125 (60.80%), Postives = 84/125 (67.20%), Query Frame = 0
Query: 1 MGDTNRPIIRPNSKIQFLP--ENKKAPRNGTSPTGNETAATFFENPNALYDPAGTEGHVQSCPETPWNKKYNIALKTLIPFRSQSKDSHTLPIEKVGCWSYVTMSWYSRTMWKAFRTGLSRLDLF 123
MGD RPIIRP S IQ LP +NKK+P NG EN N G G V SCPET WNKKYN ALKTLIP+R Q K+ LP+EKVGCWSY+T+SWY+ TMWKAFRTGLSRLDL
Sbjct: 1 MGD--RPIIRPESNIQVLPITKNKKSPANGQP----------IENINGDIYENGLGGFVPSCPETRWNKKYNTALKTLIPYRPQPKEGRYLPMEKVGCWSYLTLSWYTGTMWKAFRTGLSRLDLL 113
BLAST of atp-binding cassette sub-family c member 11- partial vs. nr
Match: gi|1000735413|ref|XP_015590168.1| (PREDICTED: multidrug resistance-associated protein 5-like isoform X4 [Cephus cinctus]) HSP 1 Score: 65.855 bits (159), Expect = 5.479e-10 Identity = 27/55 (49.09%), Postives = 38/55 (69.09%), Query Frame = 0
Query: 68 KYNIALKTLIPFRSQSKDSHTLPIEKVGCWSYVTMSWYSRTMWKAFRTGLSRLDL 122
KY+ AL+ LIP R + K +PI+ VG +S++T SW S+ MWKAFR G++ DL
Sbjct: 66 KYDNALRNLIPLRPKLKKQEAMPIDNVGLFSFITFSWLSKYMWKAFRQGITLKDL 120
BLAST of atp-binding cassette sub-family c member 11- partial vs. nr
Match: gi|1000735411|ref|XP_015590167.1| (PREDICTED: multidrug resistance-associated protein 5-like isoform X3 [Cephus cinctus]) HSP 1 Score: 65.855 bits (159), Expect = 5.487e-10 Identity = 27/55 (49.09%), Postives = 38/55 (69.09%), Query Frame = 0
Query: 68 KYNIALKTLIPFRSQSKDSHTLPIEKVGCWSYVTMSWYSRTMWKAFRTGLSRLDL 122
KY+ AL+ LIP R + K +PI+ VG +S++T SW S+ MWKAFR G++ DL
Sbjct: 66 KYDNALRNLIPLRPKLKKQEAMPIDNVGLFSFITFSWLSKYMWKAFRQGITLKDL 120
BLAST of atp-binding cassette sub-family c member 11- partial vs. nr
Match: gi|1000735409|ref|XP_015590166.1| (PREDICTED: multidrug resistance-associated protein 5-like isoform X2 [Cephus cinctus]) HSP 1 Score: 65.855 bits (159), Expect = 5.487e-10 Identity = 27/55 (49.09%), Postives = 38/55 (69.09%), Query Frame = 0
Query: 68 KYNIALKTLIPFRSQSKDSHTLPIEKVGCWSYVTMSWYSRTMWKAFRTGLSRLDL 122
KY+ AL+ LIP R + K +PI+ VG +S++T SW S+ MWKAFR G++ DL
Sbjct: 66 KYDNALRNLIPLRPKLKKQEAMPIDNVGLFSFITFSWLSKYMWKAFRQGITLKDL 120
BLAST of atp-binding cassette sub-family c member 11- partial vs. nr
Match: gi|1000735401|ref|XP_015590162.1| (PREDICTED: multidrug resistance-associated protein 5-like isoform X1 [Cephus cinctus] >gi|1000735403|ref|XP_015590163.1| PREDICTED: multidrug resistance-associated protein 5-like isoform X1 [Cephus cinctus] >gi|1000735405|ref|XP_015590164.1| PREDICTED: multidrug resistance-associated protein 5-like isoform X1 [Cephus cinctus] >gi|1000735407|ref|XP_015590165.1| PREDICTED: multidrug resistance-associated protein 5-like isoform X1 [Cephus cinctus]) HSP 1 Score: 65.855 bits (159), Expect = 5.494e-10 Identity = 27/55 (49.09%), Postives = 38/55 (69.09%), Query Frame = 0
Query: 68 KYNIALKTLIPFRSQSKDSHTLPIEKVGCWSYVTMSWYSRTMWKAFRTGLSRLDL 122
KY+ AL+ LIP R + K +PI+ VG +S++T SW S+ MWKAFR G++ DL
Sbjct: 66 KYDNALRNLIPLRPKLKKQEAMPIDNVGLFSFITFSWLSKYMWKAFRQGITLKDL 120
BLAST of atp-binding cassette sub-family c member 11- partial vs. nr
Match: gi|1228380659|ref|XP_021951802.1| (multidrug resistance-associated protein 5-like [Folsomia candida] >gi|1215269201|gb|OXA55513.1| Multidrug resistance-associated protein 5 [Folsomia candida]) HSP 1 Score: 62.3882 bits (150), Expect = 9.315e-9 Identity = 26/56 (46.43%), Postives = 41/56 (73.21%), Query Frame = 0
Query: 68 KYNIALKTLIPFRSQSKDSHTLPIEKVGCWSYVTMSWYSRTMWKAFRTGLSRLDLF 123
KY++AL+TL+PFR ++ + + LP G +S+V+ SW + MWK+FR GLS +DL+
Sbjct: 42 KYSVALQTLLPFRKETTNKY-LPSSHAGMFSFVSFSWLTPIMWKSFRQGLSPVDLW 96
BLAST of atp-binding cassette sub-family c member 11- partial vs. nr
Match: gi|1061477987|gb|ODM95653.1| (Multidrug resistance-associated protein 9 [Orchesella cincta]) HSP 1 Score: 61.6178 bits (148), Expect = 1.471e-8 Identity = 29/57 (50.88%), Postives = 39/57 (68.42%), Query Frame = 0
Query: 68 KYNIALKTLIPFRSQ-SKDSHTLPIEKVGCWSYVTMSWYSRTMWKAFRTGLSRLDLF 123
KY+ ALKTL+P+RS SK + LP K G +S+ T SW + MWKAF+ GL+ DL+
Sbjct: 26 KYSAALKTLLPYRSSPSKKKNVLPSSKSGLFSFATASWLTMLMWKAFKHGLTPSDLW 82
BLAST of atp-binding cassette sub-family c member 11- partial vs. nr
Match: gi|951520335|ref|XP_014480641.1| (PREDICTED: multidrug resistance-associated protein 5-like isoform X2 [Dinoponera quadriceps]) HSP 1 Score: 60.077 bits (144), Expect = 4.930e-8 Identity = 27/56 (48.21%), Postives = 38/56 (67.86%), Query Frame = 0
Query: 67 KKYNIALKTLIPFRSQSKDSHTLPIEKVGCWSYVTMSWYSRTMWKAFRTGLSRLDL 122
KKYN AL LIP R QS+ P++K G +SYV ++W +R +WKA++ GL+ DL
Sbjct: 59 KKYNNALNNLIPVRFQSQQKEDAPMDKAGLFSYVYITWMTRYLWKAYKKGLTIKDL 114
BLAST of atp-binding cassette sub-family c member 11- partial vs. nr
Match: gi|951520337|ref|XP_014480651.1| (PREDICTED: multidrug resistance-associated protein 5-like isoform X3 [Dinoponera quadriceps]) HSP 1 Score: 60.077 bits (144), Expect = 5.226e-8 Identity = 27/56 (48.21%), Postives = 38/56 (67.86%), Query Frame = 0
Query: 67 KKYNIALKTLIPFRSQSKDSHTLPIEKVGCWSYVTMSWYSRTMWKAFRTGLSRLDL 122
KKYN AL LIP R QS+ P++K G +SYV ++W +R +WKA++ GL+ DL
Sbjct: 59 KKYNNALNNLIPVRFQSQQKEDAPMDKAGLFSYVYITWMTRYLWKAYKKGLTIKDL 114
BLAST of atp-binding cassette sub-family c member 11- partial vs. nr
Match: gi|951520329|ref|XP_014480627.1| (PREDICTED: multidrug resistance-associated protein 5-like isoform X1 [Dinoponera quadriceps] >gi|951520332|ref|XP_014480633.1| PREDICTED: multidrug resistance-associated protein 5-like isoform X1 [Dinoponera quadriceps]) HSP 1 Score: 60.077 bits (144), Expect = 5.439e-8 Identity = 27/56 (48.21%), Postives = 38/56 (67.86%), Query Frame = 0
Query: 67 KKYNIALKTLIPFRSQSKDSHTLPIEKVGCWSYVTMSWYSRTMWKAFRTGLSRLDL 122
KKYN AL LIP R QS+ P++K G +SYV ++W +R +WKA++ GL+ DL
Sbjct: 59 KKYNNALNNLIPVRFQSQQKEDAPMDKAGLFSYVYITWMTRYLWKAYKKGLTIKDL 114 The following BLAST results are available for this feature:
BLAST of atp-binding cassette sub-family c member 11- partial vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 0
BLAST of atp-binding cassette sub-family c member 11- partial vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 0
BLAST of atp-binding cassette sub-family c member 11- partial vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold605_size125465:26428..27145+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold605_size125465-snap-gene-0.26 ID=maker-scaffold605_size125465-snap-gene-0.26|Name=atp-binding cassette sub-family c member 11- partial|organism=Tigriopus kingsejongensis|type=gene|length=718bp|location=Sequence derived from alignment at scaffold605_size125465:26428..27145+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'atp-binding cassette sub-family c member 11- partial' has the following synonyms
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