AGAP009116-PA, maker-scaffold612_size124412-snap-gene-0.21 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of AGAP009116-PA vs. L. salmonis genes
Match: EMLSAG00000002725 (supercontig:LSalAtl2s:LSalAtl2s1574:64408:65553:-1 gene:EMLSAG00000002725 transcript:EMLSAT00000002725 description:"maker-LSalAtl2s1574-augustus-gene-0.28") HSP 1 Score: 142.124 bits (357), Expect = 1.374e-39 Identity = 56/85 (65.88%), Postives = 73/85 (85.88%), Query Frame = 0 Query: 410 MFSDILLFALNVLLTLTLVFIIIYFLITLSDLECDYLNAQECCGKLNFWNVPKLWLQLTILFMLLLFGHWMLFLFNLPVCLYLAK 494 MF D+ +F+ N+L T L+FI+IYF+ITLSDLECDYLNAQECCGKLNFWNVPK WLQ++++ +LLL GHW LFL N+P+C++L + Sbjct: 1 MFGDLFVFSFNLLDTTVLMFILIYFIITLSDLECDYLNAQECCGKLNFWNVPKYWLQISMILILLLSGHWFLFLLNIPICIFLTQ 85
BLAST of AGAP009116-PA vs. SwissProt
Match: gi|12229837|sp|Q9P003.1|CNIH4_HUMAN (RecName: Full=Protein cornichon homolog 4; Short=CNIH-4; AltName: Full=Cornichon family AMPA receptor auxiliary protein 4 >gi|62900351|sp|Q5R9M4.1|CNIH4_PONAB RecName: Full=Protein cornichon homolog 4; Short=CNIH-4; AltName: Full=Cornichon family AMPA receptor auxiliary protein 4) HSP 1 Score: 87.0409 bits (214), Expect = 4.472e-19 Identity = 36/79 (45.57%), Postives = 54/79 (68.35%), Query Frame = 0 Query: 413 DILLFALNVLLTLTLVFIIIYFLITLSDLECDYLNAQECCGKLNFWNVPKLWLQLTILFMLLLFGHWMLFLFNLPVCLY 491 + ++F ++L L+F+ +YF+ITLSDLECDY+NA+ CC KLN W +P+L + +LL+ HW +FL NLPV + Sbjct: 2 EAVVFVFSLLDCCALIFLSVYFIITLSDLECDYINARSCCSKLNKWVIPELIGHTIVTVLLLMSLHWFIFLLNLPVATW 80
BLAST of AGAP009116-PA vs. SwissProt
Match: gi|110278915|sp|Q3T126.1|CNIH4_BOVIN (RecName: Full=Protein cornichon homolog 4; Short=CNIH-4; AltName: Full=Cornichon family AMPA receptor auxiliary protein 4) HSP 1 Score: 85.8853 bits (211), Expect = 1.376e-18 Identity = 35/79 (44.30%), Postives = 54/79 (68.35%), Query Frame = 0 Query: 413 DILLFALNVLLTLTLVFIIIYFLITLSDLECDYLNAQECCGKLNFWNVPKLWLQLTILFMLLLFGHWMLFLFNLPVCLY 491 + ++F ++L L+F+ +YF+ITLSDLECDY+NA+ CC KLN W +P+L + ++L+ HW +FL NLPV + Sbjct: 2 EAVVFVFSLLDCCALIFLSVYFIITLSDLECDYINARSCCSKLNKWVIPELVGHTLVTVLMLISLHWFIFLLNLPVAAW 80
BLAST of AGAP009116-PA vs. SwissProt
Match: gi|62900373|sp|Q9CX13.1|CNIH4_MOUSE (RecName: Full=Protein cornichon homolog 4; Short=CNIH-4; AltName: Full=Cornichon family AMPA receptor auxiliary protein 4) HSP 1 Score: 85.1149 bits (209), Expect = 2.066e-18 Identity = 35/79 (44.30%), Postives = 54/79 (68.35%), Query Frame = 0 Query: 413 DILLFALNVLLTLTLVFIIIYFLITLSDLECDYLNAQECCGKLNFWNVPKLWLQLTILFMLLLFGHWMLFLFNLPVCLY 491 + ++F ++L L+F+ +YF+ITLSDLECDY+NA+ CC KLN W +P+L + ++L+ HW +FL NLPV + Sbjct: 2 EAVVFLFSLLDCCALIFLSVYFIITLSDLECDYINARSCCSKLNKWVIPELVGHTIVTVLMLVSLHWFIFLLNLPVATW 80
BLAST of AGAP009116-PA vs. SwissProt
Match: gi|62900356|sp|Q6P3N5.1|CNIH4_XENTR (RecName: Full=Protein cornichon homolog 4; Short=CNIH-4; AltName: Full=Cornichon family AMPA receptor auxiliary protein 4) HSP 1 Score: 84.7297 bits (208), Expect = 3.624e-18 Identity = 35/76 (46.05%), Postives = 52/76 (68.42%), Query Frame = 0 Query: 416 LFALNVLLTLTLVFIIIYFLITLSDLECDYLNAQECCGKLNFWNVPKLWLQLTILFMLLLFGHWMLFLFNLPVCLY 491 LF +++ L+F+ +YF+ITLSDLECDY+NA+ CC KLN W VP+L + ++L+ HW +F+ NLPV + Sbjct: 5 LFIFSLIDCCALIFLSVYFIITLSDLECDYINARSCCSKLNKWVVPELVGHTVVSVLMLVSLHWFIFILNLPVAAW 80
BLAST of AGAP009116-PA vs. SwissProt
Match: gi|75169292|sp|Q9C7D7.1|CNIH1_ARATH (RecName: Full=Protein cornichon homolog 1) HSP 1 Score: 64.6994 bits (156), Expect = 4.277e-11 Identity = 47/162 (29.01%), Postives = 75/162 (46.30%), Query Frame = 0 Query: 410 MFSDILLFALNVLLTLTLVFIIIYFLITLSDLECDYLNAQECCGKLNFWNVPKLWLQLTILFMLLLFGHWMLFLFNLPVCLYLAKSRSNPVMAKRTPANIAAVMNMIEEDRRVDIDTIAAKLDLCFGTVHIIFRKDLNYSKTALPAFAKSTANFRLLMITIH 571 M D+ L+ ++ ++L LV + Y +I L+DLE DYLN E ++N +P+ LQ ++ + LL HW+ FL +PV +Y A M+ ++RR ID ++ G I F K L Y+K F FRL + ++ Sbjct: 1 MAWDLFLWIVSFFVSLALVASVFYQVICLTDLEADYLNPFETSTRINRLVIPEFILQGSLCLLFLLTWHWVFFLVAVPVTVYHA---------------------MLYKERRYLIDVT----EVFRG---ISFEKKLRYTKLGFYVFLFIMVVFRLTLSAVY 134
BLAST of AGAP009116-PA vs. SwissProt
Match: gi|586332|sp|P38312.1|ERV15_YEAST (RecName: Full=ER-derived vesicles protein ERV15) HSP 1 Score: 60.8474 bits (146), Expect = 6.916e-10 Identity = 31/78 (39.74%), Postives = 43/78 (55.13%), Query Frame = 0 Query: 416 LFALNVLLTLTLVFIIIYFLITLSDLECDYLNAQECCGKLNFWNVPKLWLQLTILFMLLLFGHWMLFLFNLPVCLYLA 493 LF ++L IYF I DLE DY+N+ E C ++N +VP+ LQ I + L G+W +FL N+PV Y A Sbjct: 8 LFVTGLILNCLNSICQIYFTILYGDLEADYINSIELCKRVNRLSVPEAILQAFISALFLFNGYWFVFLLNVPVLAYNA 85
BLAST of AGAP009116-PA vs. SwissProt
Match: gi|1723832|sp|P53173.3|ERV14_YEAST (RecName: Full=ER-derived vesicles protein ERV14) HSP 1 Score: 60.4622 bits (145), Expect = 1.003e-9 Identity = 30/76 (39.47%), Postives = 43/76 (56.58%), Query Frame = 0 Query: 416 LFALNVLLTLTLVFIIIYFLITLSDLECDYLNAQECCGKLNFWNVPKLWLQLTILFMLLLFGHWMLFLFNLPVCLY 491 LF L V++ +F ++F I +DLE DY+N E C K+N P+ L + + LL G+W +FL NLPV Y Sbjct: 5 LFILAVVVNCINLFGQVHFTILYADLEADYINPIELCSKVNKLITPEAALHGALSLLFLLNGYWFVFLLNLPVLAY 80
BLAST of AGAP009116-PA vs. SwissProt
Match: gi|75148636|sp|Q84W04.1|CNIH4_ARATH (RecName: Full=Protein cornichon homolog 4) HSP 1 Score: 55.4546 bits (132), Expect = 5.707e-8 Identity = 27/79 (34.18%), Postives = 43/79 (54.43%), Query Frame = 0 Query: 413 DILLFALNVLLTLTLVFIIIYFLITLSDLECDYLNAQECCGKLNFWNVPKLWLQLTILFMLLLFGHWMLFLFNLPVCLY 491 DI + ++ + LV II+Y L+ L+DLE DY+N + ++N +P+ +Q + LL GHW + L LP Y Sbjct: 3 DIWTWLISFFFLIALVGIIVYQLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLTGHWFMTLLCLPYLYY 81
BLAST of AGAP009116-PA vs. SwissProt
Match: gi|308154341|sp|Q9SZ74.2|CNIH5_ARATH (RecName: Full=Protein cornichon homolog 5) HSP 1 Score: 53.5286 bits (127), Expect = 2.171e-7 Identity = 26/79 (32.91%), Postives = 44/79 (55.70%), Query Frame = 0 Query: 413 DILLFALNVLLTLTLVFIIIYFLITLSDLECDYLNAQECCGKLNFWNVPKLWLQLTILFMLLLFGHWMLFLFNLPVCLY 491 D+L + ++ L TL+ I+IY L L+DLE D +N + ++N +P+ LQ + +L GHW + + +LP Y Sbjct: 3 DLLDWIISFLFLATLIIIVIYQLTCLADLEFDRINPYDVSSRINRMVLPEFGLQGLLCLYYILTGHWFMAVLSLPHLFY 81
BLAST of AGAP009116-PA vs. nr
Match: gi|817221428|ref|XP_012286210.1| (protein cornichon homolog 4 [Orussus abietinus]) HSP 1 Score: 101.293 bits (251), Expect = 2.155e-21 Identity = 45/83 (54.22%), Postives = 64/83 (77.11%), Query Frame = 0 Query: 410 MFSDILLFALNVLLTLTLVFIIIYFLITLSDLECDYLNAQECCGKLNFWNVPKLWLQLTILFMLLLFGHWMLFLFNLPVCLYL 492 M S+ LLFAL ++ T ++F+++YF+ITLSDLECDYLNA++CC KLN W VPKL ++ +LLL+G W+L L NLP+ ++L Sbjct: 1 MISEPLLFALALVDTGVVLFMLVYFVITLSDLECDYLNARQCCSKLNQWVVPKLVAHTFLVLVLLLYGQWILTLGNLPMIIWL 83
BLAST of AGAP009116-PA vs. nr
Match: gi|1080061253|ref|XP_018572612.1| (protein cornichon homolog 4 [Anoplophora glabripennis]) HSP 1 Score: 101.293 bits (251), Expect = 2.681e-21 Identity = 41/85 (48.24%), Postives = 64/85 (75.29%), Query Frame = 0 Query: 409 IMFSDILLFALNVLLTLTLVFIIIYFLITLSDLECDYLNAQECCGKLNFWNVPKLWLQLTILFMLLLFGHWMLFLFNLPVCLYLA 493 ++ D LLFA+++ T ++F+++YF+ITLSDLECDYLNAQ+CC +LN W +PK+ + + F+LL+ GHW+L NLP+ ++A Sbjct: 1 MILEDSLLFAISLADTGAILFLLVYFIITLSDLECDYLNAQQCCSRLNQWVLPKIIAHIFLSFLLLIHGHWILMFVNLPMAGWMA 85
BLAST of AGAP009116-PA vs. nr
Match: gi|1121149543|ref|XP_019561721.1| (PREDICTED: protein cornichon homolog 4-like [Aedes albopictus] >gi|1121157629|ref|XP_019565540.1| PREDICTED: protein cornichon homolog 4-like [Aedes albopictus] >gi|1121157631|ref|XP_019565541.1| PREDICTED: protein cornichon homolog 4-like [Aedes albopictus] >gi|1121157633|ref|XP_019565542.1| PREDICTED: protein cornichon homolog 4-like [Aedes albopictus]) HSP 1 Score: 101.293 bits (251), Expect = 2.738e-21 Identity = 42/79 (53.16%), Postives = 59/79 (74.68%), Query Frame = 0 Query: 410 MFSDILLFALNVLLTLTLVFIIIYFLITLSDLECDYLNAQECCGKLNFWNVPKLWLQLTILFMLLLFGHWMLFLFNLPV 488 M + L+F + +L+T ++F++IYF+I LSDLECDYLNAQ+CC KLNFW VP+L + F+LL+ G W LF+ NLP+ Sbjct: 1 MLPETLVFGIALLITGVILFLLIYFVIILSDLECDYLNAQQCCSKLNFWVVPRLSAHCFLAFILLMNGSWFLFIANLPM 79
BLAST of AGAP009116-PA vs. nr
Match: gi|1108478547|emb|CRK93609.1| (CLUMA_CG007139, isoform A [Clunio marinus]) HSP 1 Score: 100.908 bits (250), Expect = 4.422e-21 Identity = 40/83 (48.19%), Postives = 60/83 (72.29%), Query Frame = 0 Query: 410 MFSDILLFALNVLLTLTLVFIIIYFLITLSDLECDYLNAQECCGKLNFWNVPKLWLQLTILFMLLLFGHWMLFLFNLPVCLYL 492 M SD +LF+ ++ T ++F++IYF++ LSDLECDY+NAQ+CC +LNFW +PK+ + + +LL+ GH+ L L NLP YL Sbjct: 1 MISDTILFSFTLIDTGAVLFLLIYFVLILSDLECDYINAQQCCSRLNFWTIPKISAHVVVTLLLLITGHYWLLLVNLPFVGYL 83
BLAST of AGAP009116-PA vs. nr
Match: gi|1059420859|ref|XP_017783130.1| (PREDICTED: protein cornichon homolog 4 [Nicrophorus vespilloides]) HSP 1 Score: 99.7525 bits (247), Expect = 8.523e-21 Identity = 42/84 (50.00%), Postives = 62/84 (73.81%), Query Frame = 0 Query: 409 IMFSDILLFALNVLLTLTLVFIIIYFLITLSDLECDYLNAQECCGKLNFWNVPKLWLQLTILFMLLLFGHWMLFLFNLPVCLYL 492 + SD LLFA +++++ ++F+ IY++I L+DLE DYLNAQECC KLN W PKL + L + F+LL+ GHW+L L NLP+ ++ Sbjct: 1 MFLSDPLLFAFSLIVSGLILFLQIYYVIILTDLESDYLNAQECCSKLNVWVKPKLGIHLFLTFLLLIHGHWILSLINLPIAAWM 84
BLAST of AGAP009116-PA vs. nr
Match: gi|1199401150|ref|XP_021195975.1| (protein cornichon homolog 4 [Helicoverpa armigera]) HSP 1 Score: 98.9821 bits (245), Expect = 1.843e-20 Identity = 41/84 (48.81%), Postives = 64/84 (76.19%), Query Frame = 0 Query: 409 IMFSDILLFALNVLLTLTLVFIIIYFLITLSDLECDYLNAQECCGKLNFWNVPKLWLQLTILFMLLLFGHWMLFLFNLPVCLYL 492 ++ ++ LLF+L ++ + ++F+++Y++ITLSDLECDYLNAQECC KLN+W +PK I F+LLL G +LF+ NLP+ ++L Sbjct: 1 MILAETLLFSLTLIDSGGILFLLVYYIITLSDLECDYLNAQECCDKLNYWLLPKYLAHTFITFILLLHGQLILFILNLPLFIWL 84
BLAST of AGAP009116-PA vs. nr
Match: gi|910337833|ref|XP_013172500.1| (PREDICTED: protein cornichon homolog 4 [Papilio xuthus]) HSP 1 Score: 98.5969 bits (244), Expect = 2.132e-20 Identity = 43/85 (50.59%), Postives = 64/85 (75.29%), Query Frame = 0 Query: 409 IMFSDILLFALNVLLTLTLVFIIIYFLITLSDLECDYLNAQECCGKLNFWNVPKLWLQLTILFMLLLFGHWMLFLFNLPVCLYLA 493 ++ + LLF+L+++ ++F+++YF+ITLSDLECDYLNAQECC KLN+W +PK I F+LLL G +LFL NLP+ ++L+ Sbjct: 1 MILGETLLFSLSLVDCGAILFLLVYFIITLSDLECDYLNAQECCDKLNYWLLPKYIGHSFITFLLLLHGQVILFLLNLPMFIWLS 85
BLAST of AGAP009116-PA vs. nr
Match: gi|755947429|ref|XP_011300464.1| (PREDICTED: protein cornichon homolog 4 [Fopius arisanus]) HSP 1 Score: 98.5969 bits (244), Expect = 2.312e-20 Identity = 44/83 (53.01%), Postives = 62/83 (74.70%), Query Frame = 0 Query: 410 MFSDILLFALNVLLTLTLVFIIIYFLITLSDLECDYLNAQECCGKLNFWNVPKLWLQLTILFMLLLFGHWMLFLFNLPVCLYL 492 +FS+ LLFA+ +L T ++F+++YF+I LSDLECDYLNAQ+CC +LN W VPKL + +LL+ G W+L L NLP+ L+L Sbjct: 3 LFSEPLLFAVALLDTGAVLFVLVYFVIALSDLECDYLNAQQCCLRLNQWVVPKLVAHTLVNVILLIHGQWLLALANLPMSLWL 85
BLAST of AGAP009116-PA vs. nr
Match: gi|998520520|ref|XP_015521245.1| (PREDICTED: protein cornichon homolog 4 [Neodiprion lecontei]) HSP 1 Score: 98.2117 bits (243), Expect = 2.552e-20 Identity = 42/83 (50.60%), Postives = 61/83 (73.49%), Query Frame = 0 Query: 410 MFSDILLFALNVLLTLTLVFIIIYFLITLSDLECDYLNAQECCGKLNFWNVPKLWLQLTILFMLLLFGHWMLFLFNLPVCLYL 492 M S+ LLFA + T ++F+++YF+ITLSDLECDYLNAQ+CC KLN W +PK+ + ++ +LL G W+L + NLP+ L+L Sbjct: 1 MVSEPLLFAFALFDTGAVLFLLVYFVITLSDLECDYLNAQQCCSKLNTWVLPKIVGHVFLVVLLLFHGQWILMVVNLPMALWL 83
BLAST of AGAP009116-PA vs. nr
Match: gi|970899926|ref|XP_015115648.1| (PREDICTED: protein cornichon homolog 4 isoform X1 [Diachasma alloeum]) HSP 1 Score: 98.2117 bits (243), Expect = 3.003e-20 Identity = 44/84 (52.38%), Postives = 62/84 (73.81%), Query Frame = 0 Query: 410 MFSDILLFALNVLLTLTLVFIIIYFLITLSDLECDYLNAQECCGKLNFWNVPKLWLQLTILFMLLLFGHWMLFLFNLPVCLYLA 493 +FS+ LLFA +L T ++F+++YF+I LSDLECDYLNAQ+CC +LN W VPKL + +LL+ G W+L L NLP+ L+L+ Sbjct: 3 LFSEPLLFAAALLDTGAVLFVLVYFVIALSDLECDYLNAQQCCLRLNKWVVPKLVAHTLLNVILLIHGQWLLALVNLPMSLWLS 86 The following BLAST results are available for this feature:
BLAST of AGAP009116-PA vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 1
BLAST of AGAP009116-PA vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 9
BLAST of AGAP009116-PA vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold612_size124412:49991..70167+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold612_size124412-snap-gene-0.21 ID=maker-scaffold612_size124412-snap-gene-0.21|Name=AGAP009116-PA|organism=Tigriopus kingsejongensis|type=gene|length=20177bp|location=Sequence derived from alignment at scaffold612_size124412:49991..70167+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'AGAP009116-PA' has the following synonyms
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