hypothetical protein DAPPUDRAFT_327797, maker-scaffold613_size124221-snap-gene-0.35 (gene) Tigriopus kingsejongensis
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Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of hypothetical protein DAPPUDRAFT_327797 vs. L. salmonis genes
Match: EMLSAG00000002583 (supercontig:LSalAtl2s:LSalAtl2s151:1312073:1316912:-1 gene:EMLSAG00000002583 transcript:EMLSAT00000002583 description:"augustus_masked-LSalAtl2s151-processed-gene-13.2") HSP 1 Score: 263.848 bits (673), Expect = 4.376e-72 Identity = 217/647 (33.54%), Postives = 323/647 (49.92%), Query Frame = 0
Query: 219 VSSRGASLMRLASQTF-EKRRRSDDLGGEQPASKRASLATPL-DKEVDREKARLKTVLKPFLSKDLDSC---LKKLWECQVQALKRGDSDGKLVALAEVTLASLMACLKKADAATSSPKTIEEVTKANFLVGPLQVGQRKTSQTSDGRIRDHKLQALYRIELHRW---SMEDKDTLESEILIHLRQISIWEAPNVMLHFLTDSLTPIYVRDQPDILCQLYDELDIDRHESLPQLYSPS-KKHCLSIAPATVFGATSSVSSSGDGLRSGEATQKGLDEKVMKNASRKQLEKLNKRFENTRMQINLESRRPALASTRGGPVQANSARF-ERIQPVRALSSSSVDNREASSHKMRAKRNLCFESDSPPIVQSTSARGGLPKKSPRKKVIATPRKKATLSVNYQHHRKRSKTSALTKHLTPQKRHRILAPETPSSKSKLRRKTDGILSVQESPNIDVRKQRGSMTPRRTKASLSLRSMASFYS----------------GKVSRNLMKAAEMVAESRFEASGFVHRASLGDGDDGSEAARPLQRGDRRSSFETFFPHLLVRQNKPDSGGATAAE-------------DKLVTGFSTPKKR-----VQDSQTPIKSVAFDMTPQAPTPKSRGKTQNHPKGILKTPHKDDGVP 821
+ SRGA L+RL +Q + E ++R + + +++ S + P D R A K + K F ++++ C L L E Q++A+ GD D + ALAE+T++SL+ L+ ++ + + NFLV PL + +RKTS R+RDHKLQ LYR+ELH W S +D++ E+EILIHLRQISIW +P M+ FL + LTP+Y+ QP++LC LYDEL+ + ++L ++SPS K C S+AP++V S+ S + + K + N S +++KL +R + M + +P L +T + + +++ P S SS + S R KRNL F+ G P K P +TPRKK H + K + K +TP K HRI APETP K+K RRK+DG+++++ESP+ID K TPRR +ASL+L SFYS G VSRNLMKA E V + + + + L + + A F H++ ++N+PD + + D + TPKK V++S +P K V F+M Q PTP SRG K ILKTP K+ P
Sbjct: 177 IVSRGAELLRLGNQKYAENKKRRSQIKSSKNSTE--SFSFPFNDLRTARRTAFEKEMRKSFENEEVIQCSQILAMLIEFQIEAINNGD-DVSMSALAEITISSLLKHLQSTGQIKAN---LVNLVADNFLVDPLSISRRKTSLKMPKRLRDHKLQVLYRMELH-WLLPSADDQEKFENEILIHLRQISIWGSPEDMVTFLNEVLTPVYIDRQPELLCSLYDELNQPKADALRGIFSPSAKSDCSSVAPSSVMSQASNAS---------QNSSKNPSLRSHNNKSVARIKKL-RRPHSFDMGQRRQISQPHLKTTARVLAKNPTCNIKDKVGPSVTASPSS----KGRSGLHRVKRNLSFD-----------GLGRSPMKKP-----STPRKK--------HETPKKKVTGTPKRMTPNKTHRIYAPETP--KNKTRRKSDGLITIEESPDIDSIKA-CKTTPRRMRASLNLYKKTSFYSVKKVMYFRIPNHFDFLGDVSRNLMKAEENVNAFKIQGTSSQSQPFLDESSCDNTAG-------------YLFQHIIRKRNRPDDEDDNSRKKIRKIDDDHRFLSDPSSSPMKTPKKMTFKTPVKESPSPSKRVQFNMQHQPPTP-SRGXPA---KSILKTPSKEPQTP 758 HSP 2 Score: 60.4622 bits (145), Expect = 3.813e-9 Identity = 31/67 (46.27%), Postives = 46/67 (68.66%), Query Frame = 0
Query: 1332 SPGKFWAVANISQSPKGEIKMKIERTKKPQMANPFAQRLSRSSTLELGISPRKLNAMIYLNSPSPKR 1398
SP K W++ NI +SP+GEIK+KI RT K +QR+SRS E+G+SP +L ++ ++PSPK+
Sbjct: 1120 SPVKHWSITNIIESPQGEIKLKINRTPKSTF---ISQRISRSLVSEIGVSPERLRRLL-THTPSPKK 1182
BLAST of hypothetical protein DAPPUDRAFT_327797 vs. nr
Match: gi|1325328286|ref|XP_023345989.1| (uncharacterized protein LOC111714992 [Eurytemora affinis]) HSP 1 Score: 126.331 bits (316), Expect = 3.488e-25 Identity = 156/514 (30.35%), Postives = 236/514 (45.91%), Query Frame = 0
Query: 221 SRGASLMRLASQTFEKRRRSDDLGGEQPASKRASLATPLDKEVDREKARLKTVLKPFLSK-DLDSC--LKKLWECQVQALKRGDSDGKLVALAEVTLASLMACLKKADAATSSPKTIEEVTKANFLV-GPLQVGQRKTSQTSDGRIRDHKLQALYRIELHRWSM---EDKDTLESEILIHLRQISIWEAPNVMLHFLTDSLTPIYVRDQPDILCQLYDELDIDRHESLPQLYSPSKKHCLSIAPATVFGATSSVS--------SSGDGLRSGEATQKGLDEKVMK--NASRKQLEKLNKRFENTRMQINLESRRPALASTRGGPVQANSARFERIQPVRALSSSSVDNREASSHKMRAKRNLCFESDSPPIVQST-SARGGLP-KKSPRKKVIATPRKKATLSVNYQHHRKRSKTSALTKHLTPQKRHRILAPETPSSKSKLRRKTDGILSVQESPNIDVRKQRGSMTPRRTKASLSLRSMAS-FYSGKVSRNLMKAAEMVAESRFEASGFVHR 714
SRGA + LA Q+ E RR L E+ S++ S + + + K +L+ F+S+ DL+ + L + Q L +S G + A + A + LK D + +E+ ++ L+ P + Q +S+ RI +HK+Q L R EL+ W + E++ E IL HLRQIS +P M FL L Y+ +PD+LC LYDELD DR + L ++SP K S AP++ SSVS + G R A K D + + N S L + NK + R +A RG + QP A+ SS A+ + K+ + + + P+ +S AR L KSP+KK IATP+KK+ ++ LTP KRHRIL PETPS K+ LRRK+DG S+ ++P+ ++ + L++ S FYS SRN+ K ++ S +S + R
Sbjct: 572 SRGAFVRNLAQQSEESRR---SLTQEENTSEKISSEITFEAK----SCQAKNILEGFISRVDLEQGEDIANLLSSEKQKLVTAES-GDNLGFASFSEACVSIVLKHLDVCGVAKTNLEDFISSHLLIEAPAVLKQYPSSKP--FRISEHKVQVLLRCELY-WLLAKQEEQTKFERTILDHLRQISFQSSPLHMKEFLQKVLLDCYIDREPDLLCSLYDELDQDRPKQLTSIFSPEPK---SAAPSSNISHVSSVSQSSNQQQETKSTGRRIPLARPKSFDASLNRQINISAGGLRR-NKCRGGEDKPSKPQQRLGVVAKPRGVKAAVGT------QPAGAVRRSSALAHGAAGRRSSIKKAVA--TLTKPVRKSVQQARRNLSFDKSPKKK-IATPQKKSRMT---------------PIKLTPAKRHRILIPETPSIKN-LRRKSDGNRSISDTPD------------KKVSSYLNITGTQSEFYSDNRSRNMSKYENVLNASLLVSSAHLAR 1033
BLAST of hypothetical protein DAPPUDRAFT_327797 vs. nr
Match: gi|321459728|gb|EFX70778.1| (hypothetical protein DAPPUDRAFT_327797 [Daphnia pulex]) HSP 1 Score: 73.559 bits (179), Expect = 4.101e-9 Identity = 152/591 (25.72%), Postives = 242/591 (40.95%), Query Frame = 0
Query: 282 LDSCLKKLWECQVQALKRGDS-----DGKLVALAEVTLASLMACLKKADAATSSPKTIEEVTKANFLVGPLQVGQRKTSQTSDGRIRDHKLQALYRIELHRWSM-----EDKDTLESEILIHLRQISIWEAPNVMLHFLTDSLTPIYVRDQPDILCQLYDELDIDRHESLPQLYSPSKKHCLSIAPATVFGATSSVSSSGDGLRSGEATQK---GLDEKVMKNASRKQLEKLNKRFENTR-MQINLESRRPALASTRGGPVQANSARFERIQPVRALSSSSVDNREASSHKMRAKRNLCFESDSPPIVQSTSARGGLPKKSPRKKVIATPRKKATLSVNYQHHRKRSKTSALTKHLTPQK-RHRILAPETPSSKSKLR-----RKTDGILSVQESPNIDVRKQRGSMTPRRTKASLSLRSMASFYSG---------KVSRNLMKAAEMVAESRFEASGFVHRASLGDGDDGSEA----ARPLQRGDRRSSFETFF--------PHLLVRQNKPDSGGATAAEDKLVTGFSTPKKR------------VQDS--QTPIKS---VAFDMTPQAPTPKSRGKTQNHPKGILKTP 814
LD CLK LK +S D +L L +V ++++ K+ + +TI + NFL P G S D ++ + K Q + R+EL W + E+++ L+ + + + ++I P ++ F D L + P+ L L +EL+ + +P +S D +RS +T+ L + + S Q E L+ + TR ++ SR+P+L + + ERI PV +E + +R +R+L F P+ Q T KSP KV TP+K L+++++ L + TP K +ILAPETPS +LR +KTDGI V ESP I R S PRR +A+++LR ASFYS SRN + V + +A+ + G A ++ L R D + E F P +L+ P G ++ STP ++ VQ + +TP+K+ V F+ + Q TP S K P+ ILK+P
Sbjct: 593 LDRCLK---------LKNQESNSQLEDWQLFCLVQVITSTILYVWKENQSMVKGFETI----RQNFLKKP---GTVNRSTPKDNKVLEFKFQIMLRLELC-WIVPSLIGEEEEVLQDTVSL-FQMLAIHSNPQLISSFFQDGLVVSFENMLPEFLVNLGEELN----QPIP-------------------------ASLSDIVRSKNSTRTPSPTLSSRTLSVHSVSQNETLDSQRSVTRDLRSRTLSRQPSLTVLQHKKQITLPNKVERI-PV-------ATKKEEPNEVVRVRRSLQFGGTDAPL-QKTRI------KSP-SKVSFTPKK---LNMSFE---------PLAEFTTPSKATDKILAPETPS---RLRSDNKNKKTDGIHVVGESPEIKQEVLRRS--PRRLEAAIALRRRASFYSTLTSDGNPEKGASRNWTRGESQVWSEKAKANTSIQPMEDNSQQTGQSARFLFSKILSRNDSMPTSELGFSPRVNAVEPDILMPM--PSLGTPRKGSSTMLLPPSTPSRQRLTFPETGASVLVQGTPQKTPMKTPKQVQFNFSFQPATPSS--KVVPDPRSILKSP 1099 The following BLAST results are available for this feature:
BLAST of hypothetical protein DAPPUDRAFT_327797 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 1
BLAST of hypothetical protein DAPPUDRAFT_327797 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 0
BLAST of hypothetical protein DAPPUDRAFT_327797 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 2
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold613_size124221:92721..100925- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold613_size124221-snap-gene-0.35 ID=maker-scaffold613_size124221-snap-gene-0.35|Name=hypothetical protein DAPPUDRAFT_327797|organism=Tigriopus kingsejongensis|type=gene|length=8205bp|location=Sequence derived from alignment at scaffold613_size124221:92721..100925- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'hypothetical protein DAPPUDRAFT_327797' has the following synonyms
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