down syndrome cell adhesion molecule isoform x1, maker-scaffold61_size441589-snap-gene-0.14 (gene) Tigriopus kingsejongensis
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Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of down syndrome cell adhesion molecule isoform x1 vs. L. salmonis genes
Match: EMLSAG00000001666 (supercontig:LSalAtl2s:LSalAtl2s128:488193:500323:-1 gene:EMLSAG00000001666 transcript:EMLSAT00000001666 description:"maker-LSalAtl2s128-augustus-gene-5.5") HSP 1 Score: 165.236 bits (417), Expect = 5.987e-41 Identity = 197/783 (25.16%), Postives = 313/783 (39.97%), Query Frame = 0
Query: 348 IVKLSAFQKTQGGNIAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDDRVKQV--GGTLIIKEAKVDD----------SGKYLCMVNNSVGGESVETVLTVTAPLS--VEVEPKQQVVDYGRSATFKCHY-DGNPVKSVYWLKNGEPVGHT----------ETTLRINSVKKEDRG---MYQC----FVRNDQESA--------QATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLV-SHSAKLNVNGAP-YVRKMLPMKVVAGKSMFVTCPVAGYPISSVTWEKDGRQL----PFNDRQTVYRNGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTD-KQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIGGISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEA--KGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFGSDDTSINLIIQEKPETPYGLKVVDKTGRTVKLSWQAPYNGN-----SNLTRYVIEFKPIKGTWANDVDHVLVPGDQTMAGVFSLRPATSYHFRVVAQNDIGVSGPS-DTVTIETAEEAPSGPPVDIRVAAVDQHTLRMGQGPM 1075
+ ++ + Q + C A+G P P++RW K E + + D+R+ Q GT +I + + ++ G+Y C N G + +V + L+ V+ PK + V+ G C+ G P SVYWLK + T E TL +++ KED +Y C + RN+ + Q+ L + +P + + G + L C+ G P PE++W G G L G DN L I + G Y C+AS+ VG+ S+S + V+ P ++ + M G+S+ C GYP S+ W +G ++ P +R + I+NV K D Y C A N GY + D+ V V++ P P TV P + Q G + C+ G PKP + W NN ++ QD G L+I+++K + G Y CKA N G SA + V+ + ++ +C A E + I W N K +D +++PR+ I+ Q +++I +T DS +TC+A ++ S S +LI+Q+ P P L V+ ++W AP N + Y F P TW D VP T V S+ P T+Y F+V+A+N +G S PS + T T E P P ++ + L + PM
Sbjct: 40 LFQVKSRQDENDKPFIIECEAEGEPAPMYRWEKNGEPYDWQ---VYDERISQQPGRGTFLITKPRDEEIGEIFDYRRVEGQYQCFATNEWGTATSNSVYVRKSELNNFVDEPPKTKTVEEGEPFGIPCNSPTGWPKPSVYWLKMSQNWHKTLNSSRITVDPEGTLWFSNITKEDSSEDFLYACSASSYFRNEYKVGNKVHLQVIQSGSNAGLQNKREPDFQYANKRSEIALRGKEMKLWCIFGGTPLPEIRWRKQG------GPLPPGRTTLDNYGKT--LVIKHVDFEDAGDYTCEASNGVGIAKSYSISIEVHARPRFIVEPEIMITTEGESVDFLCQADGYPTPSIQWIYNGAKIEKAPPHPNR--FITPDRITITNVS-KSDTGNYGCNASNVNGYVYK-DVYVNVLDLP---------------------------------PEITVPPEETAQTVDGKAMTMKCETFGAPKPIVKW---FHNNEELTGGRYKVQD------------SGDLLIQDVKFFDAGNYTCKAENKFGKASASGTLTVKEHTRISTGPKDYEVEAGDSATFRCNAVYDSELELDIHWLKNGKLIDFDIEPRF-IQSSDQ------SLTITKTTELDSGQYTCLAKSSLDSAQASASLIVQDVPNPP-SLLWVNCNSEDAVVTW-APMGDNRAPILNYKMLYNTSFTP--DTWEVATD--TVPASDTSFKV-SMSPWTNYTFKVIARNQVGDSFPSGHSETCLTPERIPFKNPDNVEGRGTSPNNLVIYWTPM 745 HSP 2 Score: 130.568 bits (327), Expect = 2.609e-30 Identity = 291/1228 (23.70%), Postives = 444/1228 (36.16%), Query Frame = 0
Query: 437 TAPLSVEVEPKQQVVDYGRSATFKCHYDGNPVKSVYWLKNGEPVGHTETTLRINS---------VKKEDR------------GMYQCFVRNDQESAQATG----ELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCVA-KGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASS------KVGLVSH--------SAKLNVNGAP---YVRKMLPMKVVAGKSMFVTCPVAGYPISSVTWEKDGRQLPFNDRQTVYRNG-TLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIGGISAVAKIAV-QAPPSFEIK-KRTQTALISENTVLQCEAKGE-KPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFGSDDTSINLIIQEKPETPYGLKVVD-KTGRTVKLSWQAPYNGNSNLTRYVIEFKPIKGTWANDVDHVLVPGDQTMAGVFSLRPATSYHFRVVAQNDIGVSGPSDTVTIETAEEAPSGPPVDIRVAAVDQHTLRMGQGPMSDEVLVHTAEGAPTQPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVYGPSKTWYDPSTRNTKVSTDNEAELTSLKKYTNYTVQVLAFTNGGDGVKS-EVLTSTTEQDIPGP-PSSVKALAMSEEAILVSWQ-YPE-EPNGKIIQYTVYIK--ELDRS---RDIAPKTNKVNALQMSHQVDNLNKKARYEFWVTAHTTIGEGSPSIKVTLSPTNRIPAKIASFDDDFVAMVKQDVKLPCIAVGSPNP----QLHWKMRGQPIPK------NDRIRQLP---DGSLQITRVLKEDTGKY--VCMVNNKYG--QDMVTHELVVNGPPDPPEVTITSQTTDTITVKLKTSNPEDKTPV-HGYILHYK--------PEFGDWNTAQIPFGSDEFTLDSLLCGQRYHLYVTAHNSIGVGPK-STQLTANTKGVEPTVPEAHRFL------EVSAGSVTLHLNAWMDGGCPILYFVVEYKPRHHQDWTLVSNSVKAGGNFVVLDLNPATWYNLRVTA----HNNAGFSVAEYEFATLTVTGG 1570
T L +V+ +Q D + +C +G P W KNGEP RI+ K D G YQCF N+ +A + + +L D P T + G + C + G P P V W L D + + NI++ + Y C ASS KVG H +A L P Y K + + GK M + C G P+ + W K G LP R T+ G TL I +V EDA YTC A N G + +++ V RPR+ VEP +G C+ADG+P P I W + P PN + I + I N+ K + G Y C ASN G + + V PP + + T + + ++CE G KPI + W NN+ L RY + Q+ G L I+ + D+ +TC A N FG S L ++E G K + + G + A Y+ L D+ H L G F + P R + +D ++TI E SG + + + +L Q S ++V PP+ + + S A+ VTW+ P+ I YK++Y S T V + + S+ +TNYT +V+A GD S T T + IP P +V+ S +++ W P+ E N QY VY K E D S DIA +V L +DN +RY+ V AH IGE K + + A +F + DV P A S +P ++ +G I ++ R++P D + + K + Y V N Y + G P P ++ + + + L + PE+ + GY ++YK PE + + P +D+ L L Q+Y + + A +G G + T+ N + + P P RF E V + ++G P +F V+YK + L S+ + V+ L+P Y+ RV A H + Y +A+L + G
Sbjct: 36 TDELLFQVKSRQDEND--KPFIIECEAEGEPAPMYRWEKNGEPYDWQVYDERISQQPGRGTFLITKPRDEEIGEIFDYRRVEGQYQCFATNEWGTATSNSVYVRKSELNNFVDEPP-----KTKTVEEGEPFGIPCNSPTGWPKPSVYWLKMSQNWHK--TLNSSRITVDPEGTLWFSNITKEDSSEDFLYACSASSYFRNEYKVGNKVHLQVIQSGSNAGLQNKREPDFQYANKRSEI-ALRGKEMKLWCIFGGTPLPEIRWRKQGGPLP-PGRTTLDNYGKTLVIKHVDF-EDAGDYTCEASNGVGIAKSYSISIEVH----------------------------------ARPRFIVEPEIMITTEGESVDFLCQADGYPTPSIQWIYNGAKIEKAPPHPNRF------------ITPDRITITNVSKSDTGNYGCNASNVNGYVYKDVYVNVLDLPPEITVPPEETAQTVDGKAMTMKCETFGAPKPI-VKWFHNNEELTGG---RYKV----QDSGDLL---IQDVKFFDAGNYTCKAENKFGKASASGTLTVKEHTRISTGPKDYEVEAGDSATFRCNAVYDSELEL----------------DI-HWLKNGKLID---FDIEP------RFIQSSD-------QSLTITKTTELDSG-----QYTCLAKSSLDSAQASAS--LIVQDV----PNPPSLLWVNCNSEDAV-VTWA--PMGDNRAPILNYKMLYNTSFTPDTWEVATDTVPASDTSFKVSMSPWTNYTFKVIARNQVGDSFPSGHSETCLTPERIPFKNPDNVEGRGTSPNNLVIYWTPMPQIEHNAPKFQYRVYWKKDEEDASWIIEDIA--DWRVKELV----IDNQPTYSRYQIKVVAHNRIGEAKMKAKPVIGWSGENQPSEAPL--NFTLL---DVVGPRSAYVSWDPVSLDSINGDFKGYKIQTWTNSSGEEKFREIPWGKDTTEAFVQSFKPFSLNYARVLAFNGAYNGPPSNIIEVRTGEGLPGPVDM-LECFPMGSSALLLAWNKPEEVNGILRGYRIYYKEVNKTHFGPEIERYPKIRNP-SADKAKLAGLKPHQKYRVIIRAETRVGQGMRFYTECNTNPQALTP--PSRPRFTYSLMNPENGQSRVKVTWKPRVEGN-PGSHFYVQYKKSMDTTY-LASDEELNEDSVVIRGLDPGYTYDFRVVAVDGVHETPSDPLPVYTYASLPIVGA 1130 HSP 3 Score: 112.079 bits (279), Expect = 1.138e-24 Identity = 118/456 (25.88%), Postives = 185/456 (40.57%), Query Frame = 0
Query: 288 KYVVLPSGELQIRNVSPDDGFK--TYKCRTKHRLTGETKLSATAGKLVITEPLASG-----KPKFSSIVKLSAFQKTQGGNIAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDDRVKQVGGTLIIKEAKVDDSGKYLCMVNNSVG-GESVETVLTVTAPLSVEVEPKQQVVDYGRSATFKCHYDGNPVKSVYWLKNGEPVGH---------TETTLRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEF-VSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAPYVRKM-LPMKVVAGKSMFVTCPVAGYPIS---SVTWEKDGRQLPFNDRQTVYRNGTLAISNVQRKE-DASTYTCVARN--DEGYSARSDLTVTVMEPPAIV 718
+ V P G L N++ +D + Y C E K+ VI +G +P F K S +G + + C G P+P RW K L + G TL+IK +D+G Y C +N VG +S + V A VEP+ + G S F C DG P S+ W+ NG + T + I +V K D G Y C N + ++ + PPE V + T G +++KC G P P VKWF + +E + G +V D+GD++ I + G Y C+A +K G S S L V + +V AG S C A Y + W K+G+ + F+ ++ +++ + E D+ YTC+A++ D ++ S + V PP+++
Sbjct: 192 RITVDPEGTLWFSNITKEDSSEDFLYACSASSYFRNEYKVGNKVHLQVIQSGSNAGLQNKREPDFQYANKRSEI-ALRGKEMKLWCIFGGTPLPEIRWRK-----QGGPLPPGRTTLDNYGKTLVIKHVDFEDAGDYTCEASNGVGIAKSYSISIEVHARPRFIVEPEIMITTEGESVDFLCQADGYPTPSIQWIYNGAKIEKAPPHPNRFITPDRITITNVSKSDTGNYGCNASN--VNGYVYKDVYVNVLDLPPEITVPPEETAQTVDGKAMTMKCETFGAPKPIVKWF-HNNEELTGGRYKV----QDSGDLL----IQDVKFFDAGNYTCKAENKFGKASASGTLTVKEHTRISTGPKDYEVEAGDSATFRCN-AVYDSELELDIHWLKNGKLIDFDIEPRFIQSSDQSLTITKTTELDSGQYTCLAKSSLDSAQASASLIVQDVPNPPSLL 629
BLAST of down syndrome cell adhesion molecule isoform x1 vs. L. salmonis genes
Match: EMLSAG00000005601 (supercontig:LSalAtl2s:LSalAtl2s2:790586:820681:1 gene:EMLSAG00000005601 transcript:EMLSAT00000005601 description:"snap_masked-LSalAtl2s2-processed-gene-8.21") HSP 1 Score: 160.999 bits (406), Expect = 1.421e-39 Identity = 238/1033 (23.04%), Postives = 394/1033 (38.14%), Query Frame = 0
Query: 316 KHRLTGETKLSATAGKLVI--------TEPLASGKPKF----SSIVKLSAFQKTQGGNIAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDDRVKQVGGTLIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVTAPLSVEV--------EPKQQVVDYGRSATFKCHYDGN-PVKSVYW-------LKNGEPVGHTETTLRINSVKKEDRGMYQCFVRNDQ---ESAQATGELKLGGRFD---PPEFV-SAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVG---LVSHSAKLNVNGAPYVRKMLPMKVVA--GKSMFVTCPVAGYPISSVTWEKDG---RQLPFNDRQTVYRNGTLAISNVQRKEDASTYTCVARNDEG-YSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKII-DGSLIIKNIKKGNEGYYLCKASNGIGGISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEAKGEK--PIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFGSDDTSINLIIQEKPETP---YGLKVVDKTGRTVKLSWQAPYNGNSNLTRYVIEFKPIKGTW---ANDVDHVLVPGDQTMAG----VFSLRPATSYHFRVVAQNDIG---VSGPSDTVTIETAEEAPSGPPVDIRVAAVDQHTLRMGQGPMSDEVLVHTAEGAPTQPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVYGPSKTWYDP-STRNTKVSTDNEAELTSLKKYTNYTVQVLAFTNGGDGVKSEVLTSTTEQDIP-GPPSSVKALAMSEEAILVSWQ--YPEEPNGKIIQYTVYIKELD-RSRDIAPKT------NKVNAL-QMSHQVDNLNKKARYEFWVTAHTTIGEGSPS 1276
+++ TG + S T +++I T+ L P+F S+ + A ++T+ + C A G P P +RW + V L + + I+ D+G Y C N+ G T+L+ T P++V P QV G +A FK + P SV W L + +E L I SV D Y+ N Q E G L++ G PPE V D + P+ L+C+A P E++ + D SFN +S L ++ + G Y CQ + G ++ A + V PY + + ++ G + + C V G P SV W ++G ++P N R +V N R ED+ + C A N G + + L V P + P P + G D I CKA+G P P +TW + D + I+I+ DGS++I ++ ++G Y C SN G A + V ++ L C+ ++ P + W + ++ + R I +DG T+ I + D+ +TC + G+D L + E P P Y +V + ++V +SW ++GNS + +++I++ + + +D++ + + + + +L+ + +Y FR+ A N +G S PS+ V + +E PSGPP+ LV +A S I + W P + NG I GY + Y P S RN +T L + +Y +Q+ AF N G G S + T + +P PS V+A A+ + V W P++ NG Y + D R DI P++ + +N L + + +DNL Y V +T+ G+G S
Sbjct: 3 RYKRTGFSNNSVTLQRILILIYFVFTVTDGLDLKAPRFIISPSASGSIVAERRTK----ILQCQAVGSPQPQYRW--------TRDGVVLSEFSSET--FYKIQSVMKADAGNYQCAARNTAG-----TILSDTIPITVAYMTPFDPAPNPDLQV-KAGHAAIFKFPVLASVPEPSVIWQTDDGTQLYGVKYAMTSENDLVILSVDSSDSRRYRTRATNTQLGQEENSPYGFLEVYGEDGADVPPEIVIPPKDLTVNKDTPVSELQCIANARPLSEIELTWHKDGVPIDETQVSYSFNDLWNRTLSLLRVN---LDHSGVYSCQVRMRSGGGPTLTKDATVKVTEKPYFYRRMSLETFGDFGNDISIPCHVKGIPEPSVIWYRNGIPIDEVP-NTRYSVDPEDRSLKINFMRNEDSGMFQCSAVNYAGDVNGYTWLRVKTSSPVLVDP-----------------------------------PKNTSALDGKDVSIPCKAEGAPLPNVTWY---------------FNDGQITYSGRIQILEDGSMLISKVRSTDQGKYSCIRSNTAGNTRGEAWLGVLVRXQITSPPVDSKVILGHVASLHCKVSSDQDVPYEVHWYHEGRMINAAMSHRINI----LDDG---TLKIAEARASDAGDYTCEVKSTGGNDHRVAALDVIELPYAPTRIYAERVANAQ-KSVNVSWTPGFDGNSPIIKFIIQYHSVPQSGPIPKDDLNWITALANISSTARTILLSNLKSSAAYIFRLSAVNSVGEGPQSLPSNRVVL--PQEPPSGPPLG----------------------LVGSAR---------------SETEIMIQWQPPNEQAQNGDILGYIIRYRLFGYNDSPWSYRNVSKPLQRNYLITELITWKDYEIQIAAFNNKGTGAYSSSIKLKTREGVPYSAPSGVRAQAIDSSVVRVWWLPPDPQKINGINQGYKLQAWIGDPRDTDIKPQSTVTVAPDLLNPLSEQTAVIDNLKPWTAYNVTVLCYTSPGDGKRS 914 HSP 2 Score: 97.4413 bits (241), Expect = 3.315e-20 Identity = 69/206 (33.50%), Postives = 100/206 (48.54%), Query Frame = 0
Query: 1070 MGQGPMSDEVLVHTAEGAPTQPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVYGPSKTWYDPSTRNTKVSTDNEAELTSLKKYTNYTVQVLAFTNGGDGVKSE-VLTSTTEQDIPGPPSSVKALAMSEEAILVSWQYPEEPNGKIIQYTV-YIKELDRSRDIAPKTNKVNALQMSHQVDNLNKKARYEFWVTAHTTIGEG 1273
+G S +L T E P P +V SS I V W +NG+++GYKV +G + +N + ++ LT LKKYT Y +QVLA+T GDG S T +D+PGPPS+V +S + W P EPNG I +Y V Y E + SR+ + + +++ NL+ + Y F V A T +G G
Sbjct: 1206 LGTSDPSTVILARTREAVPGAGPNDVSAEATSSTTILVRWGDVLKRHSNGILEGYKVYFGAKGVPFQ--YKNIGSNQTHQTTLTELKKYTEYAIQVLAYTRIGDGALSAPPFRVRTFEDVPGPPSNVSFPDVSYTTARIIWDIPAEPNGVINKYRVSYYPEGNPSRNFS---KEFLPTDRTYRAINLDPMSNYVFEVIAKTNLGWG 1406 HSP 3 Score: 89.3521 bits (220), Expect = 1.045e-17 Identity = 152/640 (23.75%), Postives = 249/640 (38.91%), Query Frame = 0
Query: 21 DTNGPVFIQEPPNQMDFSNTTGTEII-CQSRGTPMPQITWVKGDGSIVQDVPGLRKVMANGNLVLPPFRAEDYNQ-----EVHAQTYRCIAENTLGKVQSRDVQVRAVVHQSYDVYVEME-HVIMGNDVLFKCKIPSYVTD---LVQVLDWVESHG-NSLKTAPNFVVIQPFETDVGKEYVILGNDALM---KCSIPSFVADQLEVVSWHGSDGSEIRPGQIHVVYQPYQQEASNEYVIVGNSALFKCEVPSFVADVVDLVGWIDSEGTSFDRSQHSNYDGKYVVLPSGELQIRNVSPDDGFKTYKCRTKHRLTGETKLSATAGKLVITEPLASGKPKFSSIVKLSAFQKTQGGNIAVTCPAQGYPIPVFRWYK----FMESNNNKKLVALDDRVKQVGGTLIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVTAPLSVEVEP-KQQVVDYGRSATFKCHYDGNPVKSVYWLKNGEPVGHT-------ETTLRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTTQP-------GPMVSLKCVAKGDP-AP-EVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAPY 625
D P FI P T+I+ CQ+ G+P PQ W + DG +VL F +E + + + A Y+C A NT G + S + + +D + V G+ +FK + + V + + Q D + +G T+ N +VI ++ + Y + + + S F LEV +G DG+++ P +V P + + + + +C + ++L W +G D +Q S + L + L + V+ D Y C+ + R G L+ A + +TE KP F + L F G +I++ C +G P P WY+ E N + V +DR +L I + +DSG + C N G + T L V V V+P K G+ + C +G P+ +V W N + ++ + ++ I+ V+ D+G Y C N + GE LG V +T+ P G + SL C D P EV W+ G + ++ D+G L I++AR G Y C+ S G A L+V PY
Sbjct: 34 DLKAPRFIISPSASGSIVAERRTKILQCQAVGSPQPQYRWTR-DG-----------------VVLSEFSSETFYKIQSVMKADAGNYQCAARNTAGTILSDTIPITVAYMTPFDPAPNPDLQVKAGHAAIFKFPVLASVPEPSVIWQTDDGTQLYGVKYAMTSENDLVILSVDSSDSRRYRTRATNTQLGQEENSPYGF----LEV---YGEDGADVPP---EIVIPPKDLTVNKDTPV----SELQCIANARPLSEIELT-W-HKDGVPIDETQVSY---SFNDLWNRTLSLLRVNLDHS-GVYSCQVRMRSGGGPTLTKDA-TVKVTE-----KPYFYRRMSLETFGDF-GNDISIPCHVKGIPEPSVIWYRNGIPIDEVPNTRYSVDPEDR------SLKINFMRNEDSGMFQCSAVNYAGDVNGYTWLRVKTSSPVLVDPPKNTSALDGKDVSIPCKAEGAPLPNVTWYFNDGQITYSGRIQILEDGSMLISKVRSTDQGKYSCIRSN--TAGNTRGEAWLG--------VLVRXQITSPPVDSKVILGHVASLHCKVSSDQDVPYEVHWYHEGRMINAAMSHRINIL--DDGT----LKIAEARASDAGDYTCEVKSTGGNDHRVAALDVIELPY 606 HSP 4 Score: 73.9442 bits (180), Expect = 5.173e-13 Identity = 90/399 (22.56%), Postives = 164/399 (41.10%), Query Frame = 0
Query: 952 PETPYGLKVVDKTGRTVKLSWQAPYNGNSNLTRYVIE-FKPIKGTWANDVDHVLVPGDQTMAGVFSLRPATSYHFRVVAQNDIGVSGPSDTVTIETAEEAPSGPPVDIRVAAVDQHTLRMGQGPMSDEVLVHTAEGAPTQPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVYGPSKTWYDPSTRNTKVSTDNEAELTSLKKYTNYTVQVLAFTNGGDGVKSEVLTSTTEQDIPGP-PSSVKALAMSEEAILVSWQ--YPEEPNGKIIQYTVYIKELDRSRDIAPKTNKVNALQMSHQ--VDNLNKKARYEFWVTAHTTIGEGSPSIKVTLSPTNRIPAKIASFDDDFVAMVKQDVKLPCIAVGSPNPQLHWKMRGQP--IPKNDRIRQLPDGS 1342
P P L V + +V L + ++GNS++T++ ++ +W + D G+ + V +L P Y R++A N +G S PS+ R Q T + P P V I ++ + ++V W G+ +GY + Y +K + ++ + + T N L L+++T Y V + A+ + G S V+ + T + +PG P+ V A A S ILV W NG + Y VY ++ + + + + Q +HQ + L K Y V A+T IG+G+ S P ++ +F+D V +V P ++ + ++ W + +P + R+ P+G+
Sbjct: 1024 PSPPIRLAVSNIQPFSVYLQFTPGFDGNSSITKWTVQALSARNASWTSIFDEYDPKGNAIL--VKNLIPYMEYSLRLIANNVVGASEPSEPT--------------------------RQFQ----------TIQAPPKHAPQNVTIRSMXATELRVRWIPLSQGEWYGIPRGYNISYRINKDSSELNSISIEDPTRNTFVLDGLEEFTLYEVVLHAYNDLGTSDPSTVILARTREAVPGAGPNDVSAEATSSTTILVRWGDVLKRHSNGILEGYKVYFG----AKGVPFQYKNIGSNQ-THQTTLTELKKYTEYAIQVLAYTRIGDGALSAP---------PFRVRTFED--VPGPPSNVSFPDVSYTT--ARIIWDIPAEPNGVINKYRVSYYPEGN 1366 HSP 5 Score: 55.8398 bits (133), Expect = 1.349e-7 Identity = 113/472 (23.94%), Postives = 181/472 (38.35%), Query Frame = 0
Query: 1130 PSKTWYD--------PSTRNTKVSTDNEAELTSLKKYTNYTVQVLAFTNGGD-GVKSEVLTSTTEQDIPGPPSSVKAL--------AMSEEAIL--VSWQYPEEPNGKIIQYTVYIKELDRSRDIAPKTNKVNALQMSHQVDNLNKKARYEFWVTAHTTIGEGSPSI--KVTLSPTNRIPAKIASFDDDFVAMVKQDVKLPCIAVGSPNPQLHWKMRGQPI--PKNDRIRQLPDGSLQITRVLKEDTGKYVCMVNNKYGQDMVTHEL-VVNGPPDPPEVTITSQTTDTITVKLK-TSNPEDKTPVHGYILHYK--PEFG-------DWNTAQIPFGSDEFT--LDSLLCGQRYHLYVTAHNSIGVGPKSTQLTANTKGVEPTVPEAHRFLEV--SAGSVTLHLNAW-----MDGGCPILYFVVEYKPRHHQD--WTLVSNSVKAGGNFVVLDLNPATW--YNLRVTAHNNAG 1554
PS WY P+TR + D ++ ++ + Q A GD + + T+ + PP + AL +E A L V+W + N I Y+ I+ L+ + K + + S N R E W+ SP + KV L + K++S QDV ++HW G+ I + RI L DG+L+I D G Y C V + G D L V+ P P + +V + T + +P+ +I+ Y P+ G +W TA S T L +L Y ++A NS+G GP+S L +N + V P P + L + SA S T + W IL +++ Y+ + D W+ + S N+++ +L TW Y +++ A NN G
Sbjct: 356 PSVIWYRNGIPIDEVPNTRYSVDPEDRSLKINFMRNEDSGMFQCSAVNYAGDVNGYTWLRVKTSSPVLVDPPKNTSALDGKDVSIPCKAEGAPLPNVTWYF----NDGQITYSGRIQILEDGSMLISKVRSTDQGKYSCIRSNTAGNTRGEAWLGVLVRXQITSPPVDSKVILGHVASLHCKVSS---------DQDVPY----------EVHWYHEGRMINAAMSHRINILDDGTLKIAEARASDAGDYTCEVKSTGGNDHRVAALDVIELPYAPTRIYAERVANAQKSVNVSWTPGFDGNSPIIKFIIQYHSVPQSGPIPKDDLNWITALANISSTARTILLSNLKSSAAYIFRLSAVNSVGEGPQS--LPSN-RVVLPQEPPSGPPLGLVGSARSETEIMIQWQPPNEQAQNGDILGYIIRYRLFGYNDSPWSYRNVSKPLQRNYLITEL--ITWKDYEIQIAAFNNKG 799
BLAST of down syndrome cell adhesion molecule isoform x1 vs. L. salmonis genes
Match: EMLSAG00000008465 (supercontig:LSalAtl2s:LSalAtl2s51:20931:201116:-1 gene:EMLSAG00000008465 transcript:EMLSAT00000008465 description:"maker-LSalAtl2s51-augustus-gene-2.12") HSP 1 Score: 146.747 bits (369), Expect = 4.438e-35 Identity = 202/891 (22.67%), Postives = 342/891 (38.38%), Query Frame = 0
Query: 632 MKVVAGKSMFVTCPVAGYPISSVTWEKDGRQLPFNDRQTV---YRNGTLA-ISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIID-----GSLIIKNIKKGNEGYYLCKASNGIGGISAVA----KIAVQAPPSFEIK-KRTQTALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFGSDDTSINLIIQEKPETPYGLKVVDKTGRTVKLSWQAPYNGNSNLTRYVIEFKPIKGTWANDVDHVLVPGDQT-MAGVFSLRPATSYHFRVVAQNDIGVSGPSDTVTIETAEEAPSGPPVDIRVAAVDQHTLRMGQGPMSDEVLVHTAEGAPTQPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVY--GPSKT---WYDPSTRNTKVSTDNEAELTSLKKYTNYTVQVLAFTNGGDGVKSEVLTSTTEQDIPGPPSSVKALAMSEEAILVSWQYPEEPNGKIIQYTVYIKELDRSRDIAPKTNKVNALQMSHQVDNLNKKARYEFWVTAHTTIGEGSPSIKVTLSPTNRIPAKIASFDDDFVAMVKQDVKLPCIAVGSPNPQLHWKMRGQPIPKNDRIRQLPDGSLQITRVLKEDTGKYVCMVNNKY-------------GQDMVTHELVVNG----PPDPPEVTITSQTTDTITVKLKTSNPEDKTPV-HGYILHYKPEFGDWNTAQIPF-------GSDEFTLDSLLCGQRYHLYVTAHNSIGVGPKSTQLTANTKGVEPTVP 1477
+ V +G C +G P + W KDG ++ ++ + + +R G+L I +RK D S + C+A N G + T+ V+E + P P P K + +A + C+A G P + W K D D ++ + I+ GSL IK+ ++ ++G Y C A N +G + A + PP+F ++ ++ + L C G + W ++ + P I E L IS +SA +TCVA + G + + + +Q +P P +++ D T TV+LSW P N N+ + Y I++KP +W D+ V G T + L P T Y F ++A N++G PS V T E D R + G+ P S P V + LSS + + P + NG I GYKV Y PS + W N K++T ++ L +T YT++V A+ G G SE + T+Q +P PS+ + + + + ++W P I+ Y +Y + + D + K + ++ ++ L Y W A GEG+ + + + +P + D A + L + P + + K+ I R PD + + + +YV KY G +++ +VV P +P + + + ++ V +DK V GY ++ KP+ + +P EF + L RY + V A IG G +S + T G P+ P
Sbjct: 125 ITVRSGGIAAFYCYASGDPKPHILWRKDGEKISYSQTRYLISEFRGGSLLRIEPARRKFDDSKFECLAENGXGDPVSATSTLKVVE---------------------------DNNLPTGFPEIKQHPGMKVVEKAHNALLVCQAAGNPSVNVYWVK-------------DTMKLDVDSNPRLTILKQGKLRGSLQIKDSQESDQGKYECVAENSVGTQYSYAAQVXVRVRRVPPTFSVQPDDVYNVMMGSSLNLTCVGVGSPMPYVKWRKGSQDMSALTPP---IGRNVLE---LQDIS-------ESANYTCVAASKLGIIEHTTLVQVQARPRAPTNVRLSDVTPTTVRLSWSYPGN-NAEVMYYTIQYKPKLASW----DYKEVSGIITDFYDIRGLSPFTEYEFVILAVNNVGRGEPSTPVVATTGE-------TDGRDS---------GKKPGS--------------APRNVRVRPLSSSTMVIQXDEP--QANNGQITGYKVYYTTNPSDSLTQWESQFVDNNKLTT-----ISELIPHTIYTIKVEAYXAIGPGPPSEAVQVKTQQGVPSQPSNFRVIEVRATTMTLAWSSPSHSGENIVSYELYWNDT-FTNDF--QNQKSLDIISNYTLEGLYPNTLYHVWXGAKXRRGEGATTPPIAVRTEQYVP---GAPPDLVKAYAESSTSLRVVWSPPPPGKRNGKITYYEIYYVPSAR--PDSEATMVEIKNPEAREYVIDELRKYTEYRLWMLAGTSVGXGPISYPVVVKTGEDVPGEPLNIRALAINSSSVQVHWDPPTDDDKNGVIRGYQIYVKPKSSESEXYTMPLRFITRNGKETEFNVTGLQPDTRYVIQVAALTRIGDGTRSKPVKVKTPGGVPSRP 912 HSP 2 Score: 139.428 bits (350), Expect = 7.554e-33 Identity = 246/1066 (23.08%), Postives = 397/1066 (37.24%), Query Frame = 0
Query: 524 DPPEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSE-AESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGT-YECQASSKVG-LVSHSAKLNV-------NGAPYVRKMLPMKVV-AGKSMFVTCPVAGYPISSVTWEKDGRQLPF--NDRQTVYR----NGTLAISNVQRKEDASTYTCVARNDEG--YSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTD-KQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIGGISAVAKIAVQAPPSFEIKKRTQTALISENTV-LQCEAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTI-SIKRTQREDSALFTCVATNAFGSDDTSINLIIQ----------EKP-ETPYGLKVVDKTGRTVKLSWQAPYNGNSNLTRYVIEFKPIKGTWANDVDHVLVPGDQTMAGVFSLRPATSYHFRVVAQNDIGVSGPSDTVTIETAEEAPSGPPVDIRVAAVDQHTLRM--------GQGPMSDEV-------------------------------LVHTAEGA---------------------PTQPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVYGPSKTWYDPSTRNTKVSTDN----EAELTSLKKYTNYTVQVLAFTNGGDGVKSEVLTSTTEQDIPGPPSSVKALAMSEEAILVSWQYP--EEPNGKIIQYTVYIKELDRSRD---IAPKTNKVNALQMSHQVDNLNKKARYEFWVTAHTTIGEGSPSIKVTLSPTNRIPAKIASFDDDFVAMVKQDVKLPCIAVGSPNPQLHWKMRGQPIPKNDRIRQL-----PDGSLQITRVLKEDTG---KYVCMVNNKY--GQDMVTHELVVNGPP--DPPEVTITSQTTDTITVKLKTSNPEDKTPVHGYILHYKPEFGDWNTA-----QIPFGSDEFT-LDSLLCGQRYHLYVTAHNSIGVGPKSTQLTANT 1469
+PPE +T + G + + C A GDP P + W G + + S + F S L I AR K+ + +EC A + G VS ++ L V G P +++ MKVV + + C AG P +V W KD +L N R T+ + G+L I + Q + D Y CVA N G YS + + V V P P ++V+P D GS + C G P P + W+K D RN+ L +++I + Y C A++ +G I + VQA P R ++ TV L G + + + K P+ + + G+++ I+ F +A N G + S ++ +KP P ++V + T+ + P N +T Y + + + V ++ + + L P T Y +V A IG PS+ V ++T + PS P + RV V T+ + G+ +S E+ L H GA P PP V SS +++V WS PP NG I Y++ Y PS P + T V N E + L+KYT Y + +LA T+ G G S + T +D+PG P +++ALA++ ++ V W P ++ NG I Y +Y+K + + + N + V L RY V A T IG+G+ S V + + P + S + V ++K+D + + + + +++G + R +L D +Q + + G ++ NK GQ+ + L G P P +T QT D I + E + +G I Y +F W +I ++ T +L Y V A+ G GP STQ++ T
Sbjct: 114 NPPEITDPPKDITVRSGGIAAFYCYASGDPKPHILWRKDGEKISYSQTRYLISEFRGG-----SLLRIEPARRKFDDSKFECLAENGXGDPVSATSTLKVVEDNNLPTGFPEIKQHPGMKVVEKAHNALLVCQAAGNPSVNVYWVKDTMKLDVDSNPRLTILKQGKLRGSLQIKDSQ-ESDQGKYECVAENSVGTQYSYAAQVXVRVRRVP---------------------------------PTFSVQPDDVYNVMMGSSLNLTCVGVGSPMPYVKWRKG----------SQDMSALTPPIGRNV------LELQDISES--ANYTCVAASKLGIIEHTTLVQVQARPRAPTNVRLSD--VTPTTVRLSWSYPGNNAEVMYYTIQYK-------PKLASWDYKEVSGIITDFYDIRGLSPFTEYEFVILAVNNVGRGEPSTPVVATTGETDGRDSGKKPGSAPRNVRVRPLSSSTMVIQXDEPQANNGQITGYKVYYTTNPSDSLTQWESQFVDNNK-LTTISELIPHTIYTIKVEAYXAIGPGPPSEAVQVKTQQGVPSQPS-NFRVIEVRATTMTLAWSSPSHSGENIVSYELYWNDTFTNDFQNQKSLDIISNYTLEGLYPNTLYHVWXGAKXRRGEGATTPPIAVRTEQYVPGAPPDLVKAYAESSTSLRVVWSPPPPGKRNGKITYYEIYYVPSAR---PDSEATMVEIKNPEAREYVIDELRKYTEYRLWMLAGTSVGXGPISYPVVVKTGEDVPGEPLNIRALAINSSSVQVHWDPPTDDDKNGVIRGYQIYVKPKSSESEXYTMPLRFITRNGKETEFNVTGLQPDTRYVIQVAALTRIGDGTRSKPVKV----KTPGGVPSRPNIDVKLIKKDPTITMDIEWTKPVKTYGELKGYRVRYGRRGFKLTEILITDKDVQHQEISNLEKGIEYEFRIAGINKVGSGQEAIKPYLTPEGVPTDSPKNITTRFQTPDVIEISYDAPPEESR---NGQITMYDIQF--WKAVSPEEKRIRXTTERKTVFANLEDNTEYKFSVRANTRKGYGPWSTQVSFRT 1099 HSP 3 Score: 80.1073 bits (196), Expect = 6.443e-15 Identity = 80/292 (27.40%), Postives = 123/292 (42.12%), Query Frame = 0
Query: 359 GGNIAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDDRVKQVGGTLIIKE---AKVDDSGKYLCMVNNSVGGE-SVETVLTV-------TAPLSVEVEPKQQVVDYGRSATFKCHYDGNPVKSVYWLKNGEPV-------------GHTETTLRINSVKKEDRGMYQCFVRNDQESAQA-TGELKLGGRFDPPEF-VSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAP 624
GG A C A G P P W K E + + L + GG+L+ E K DDS K+ C+ N G S + L V T ++ P +VV+ +A C GNP +VYW+K+ + G +L+I ++ D+G Y+C N + + ++ + R PP F V D G ++L CV G P P VKW GS+ S +G +V+ +IS++ Y C A+SK+G++ H+ + V P
Sbjct: 130 GGIAAFYCYASGDPKPHILWRKDGEKISYSQTRYLISEFR--GGSLLRIEPARRKFDDS-KFECLAENGXGDPVSATSTLKVVEDNNLPTGFPEIKQHPGMKVVEKAHNALLVCQAAGNPSVNVYWVKDTMKLDVDSNPRLTILKQGKLRGSLQIKDSQESDQGKYECVAENSVGTQYSYAAQVXVRVRRVPPTFSVQPDDVYNVMMGSSLNLTCVGVGSPMPYVKWR-KGSQDMSALTPPIGR------NVLELQDISES-----ANYTCVAASKLGIIEHTTLVQVQARP 406 HSP 4 Score: 65.0846 bits (157), Expect = 2.611e-10 Identity = 76/297 (25.59%), Postives = 121/297 (40.74%), Query Frame = 0
Query: 446 PKQQVVDYGRSATFKCHYDGNPVKSVYWLKNGEPVGHTET-----------TLRINSVKKE-DRGMYQCFVRNDQ-ESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVS-------LKCVAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGL-VSHSAK--LNVNGAPYVRKMLP---MKVVAGKSMFVTCPVAGYPISSVTWEKDGRQLPFNDRQTVYRNGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPA 716
PK V G A F C+ G+P + W K+GE + +++T LRI +++ D ++C N + AT LK+ + P + F + PG V L C A G+P+ V W + + D ++ G + L I ++ G YEC A + VG S++A+ + V P + P V+ G S+ +TC G P+ V W K G Q + RN + +Q +++ YTCVA + G + L P A
Sbjct: 122 PKDITVRSGGIAAFYCYASGDPKPHILWRKDGEKISYSQTRYLISEFRGGSLLRIEPARRKFDDSKFECLAENGXGDPVSATSTLKVVEDNNLP---TGFPEIKQHPGMKVVEKAHNALLVCQAAGNPSVNVYWVKDTMKLDVDSNPRLTILK--QGKLRGSLQIKDSQESDQGKYECVAENSVGTQYSYAAQVXVRVRRVPPTFSVQPDDVYNVMMGSSLNLTCVGVGSPMPYVKWRK-GSQDMSALTPPIGRN----VLELQDISESANYTCVAASKLGIIEHTTLVQVQARPRA 408 HSP 5 Score: 64.3142 bits (155), Expect = 4.625e-10 Identity = 69/277 (24.91%), Postives = 111/277 (40.07%), Query Frame = 0
Query: 1295 DDDFVAMVKQDVKLPCIAVGSPNPQLHWKMRGQ-------PIPKNDRIRQLPDGSLQITRVLKEDTGKYVCMVNNKYGQDMVTHELVVNGPPDPPEVTITSQTTDTITVKLKTSNPEDKTPVHGYILHYKPEFGDWNTAQIP-FGSDEFTLDSLLCGQRYHLYVTAHNSIGVGPKSTQLTANT-------KGVEP-TVPEAHRFLEVSAGSVTLHLNAWMDGGCPILYFVVEYKPRHHQDWT-LVSNSVKAGGNFVVLDLNPATWYNLRVTAHNNAG 1554
DD + M+ + L C+ VGSP P + W+ Q PI +N + +L D S ++ Y C+ +K G T + V P P S T T TV+L S P + V Y + YKP+ W+ ++ +D + + L Y + A N++G G ST + A T G +P + P R +S+ ++ + + I + V Y T S V + +L P T Y ++V A+ G
Sbjct: 326 DDVYNVMMGSSLNLTCVGVGSPMPYVKWRKGSQDMSALTPPIGRN--VLELQDIS---------ESANYTCVAASKLGIIEHTTLVQVQARPRAPTNVRLSDVTPT-TVRLSWSYPGNNAEVMYYTIQYKPKLASWDYKEVSGIITDFYDIRGLSPFTEYEFVILAVNNVGRGEPSTPVVATTGETDGRDSGKKPGSAPRNVRVRPLSSSTMVIQXDEPQANNGQITGYKVYYTTNPSDSLTQWESQFVDNNKLTTISELIPHTIYTIKVEAYXAIG 590
BLAST of down syndrome cell adhesion molecule isoform x1 vs. L. salmonis genes
Match: EMLSAG00000003860 (supercontig:LSalAtl2s:LSalAtl2s209:184550:379550:-1 gene:EMLSAG00000003860 transcript:EMLSAT00000003860 description:"maker-LSalAtl2s209-augustus-gene-4.12") HSP 1 Score: 139.428 bits (350), Expect = 4.811e-33 Identity = 232/1027 (22.59%), Postives = 376/1027 (36.61%), Query Frame = 0
Query: 599 GTYECQASSK-VG-LVSHSAKLNVNGAP-YVRKMLPMKVVAGKSMFVTCPV-----AGYPISS--VTWEKDGRQLPFNDRQTVYRNGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDAS--NDRNIKIIDGSLIIKNIK-KGNEGYYLCKASNGIGGISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFGSDDTSINL------------------------------IIQEKPETPYGLKVVDKTGRTVKLSWQAPYNGNSNLTRYVIEFKPIKGTWANDVDHVLVPGDQTMAGVFSLRPATSYHFRVVA-----------------QNDIGVSGP--------SDTVTIETAEEAPS------------------GPPVDIRVAAVDQHTLRM----------------GQGPMSDEVLVHTAEGAPTQPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVY-----GPSKTWYDPSTRNTKVSTDNEAELTSLKKYTNYTVQVLAFTNGGDGVKSEVLTSTT------EQDIPGPPSSVKALAMSEEAILVSWQYPEEPNGKIIQYTV---------YIKELDRSRDIAPKTNKVNALQMSHQVDNLNKKARYEFWVTAHTTIGEGSPSIKVTLSPTNRIPAKIASFDDDFVAMVKQDVKLPCIAVGSPNPQLHWKMRGQPIPKNDR--------IRQLPDGSLQITRVLKEDTGKYVCMV-----NNKY--------GQDMVTHELVVNG------PPDPPEVTITSQTTDTITVKLKTSNPEDKTP---VHGYILHY----KPEFGDWNTAQIPFGSDEFTLDSLLCGQRYHLYVTAHNSIGVGPKSTQLTANT 1469
G Y+C A K +G +VS +A L V P + + ++V G++ C + + +SS + KD + L N R ++ +G L I NV+ D + Y+CV Y + V PP + V+P ++ QG+ +DC A+G P+PEITW K D D S + R K+ GSL I+++ + + G Y C+A N A + V + P F ++ Q + +C+ + P + W N + + T+ + I DG S + I D+ ++ C+ATN+ G+ +S L I + P P V R + L+W +P N + Y + +K KG+ V + G+ + + L P TSY FRV+A Q+DI V GP + + +I A + PS G V + H + G+G S+E+ T P PP V + SS++I + W PP S NG+I GYK+ Y G S+ + ++R V + L T Y V++ A T G G + L+ +T E +P PSS++ AM +E I ++W P++ + Y + YI +D Q ++ +L + Y + A+ IG+G P + + ++++ + + V L I + S + L W +PKN +R P I + T CM+ N +Y G+ M LV P P I D TV+L P K P ++GYI+ Y K +W TL+ L +Y ++A N+ G GP S ++ T
Sbjct: 88 GIYQCVAXVKGLGKIVSKTAVLIVKDPPSFELEPSDLQVFLGQTAAFQCLLETPDNSEDELSSDNIQRLKDDQPLILNHRISIKPSGMLEIINVE-PSDRAKYSCV------YGEELKTSSLVNSPPNFI----------------------------------VKPRNRAVLQGTTLILDCAANGVPQPEITWLK-------------DGASLDMSHLDSRLTKLGKGSLKIQDLNAETDSGAYQCRAENTEDSQDVTAIVEVHSAPEFVVRPSNQMCSAKGDITFECKVQSFPPAKVQWYKNGELIVTS--DYFQI-----VDG--SNLRILGLLDSDAGMYQCMATNSVGNVQSSAQLKVISNVVSPSLSSVSSSLDSSPSNDDQGSFIFLDXPSAPIXFHVAIXATRFITLTWSSPLNPEGTILGYTVYYKE-KGSERERVMNS-TRGELSEVNIQGLTPGTSYEFRVLAFNENGRGEYSEMITVSTQDDIDVPGPVRNLRCRPTASFSILVAWDTPSTDTGFITQYKVCHRQGEYGFERSTIVKKMKYHLTDLREYTDYTFWVSASNANGEGVHSEEIKCMTYSDIPADPPTNVTLEAASSRSILLRWEPPPKESQNGIISGYKLRYKKKGRGKSEIFTTDASRRLFV-------IPKLFVGTEYQVKIAAMTVNGTGPSTPWLSISTFDSDRDESIVPNQPSSIRVRAMDDE-IAITWTPPKDSQILVRGYRMGWGKGVPDEYIHVVDEK-------------QRFFRITDLKPNSEYVISLRAYNNIGDGRPIYETVRTQ--------EEYEEEVLTPLLPPVGLHTIVLSSYSIVLTWV--DSSLPKNQVVSDYRYYIVRYAPVNKSPIKYQYRNST-DLNCMIDDLRANAEYEFTVKIIKGRRMSPWSLVAMNKTLEAEPSSAPRDLIIDSVGDG-TVELSWIAP--KYPNGRINGYIIQYTKNRKAAEIEWXXEAXVGAXTXATLNGLDMDAKYFFKMSARNNKGYGPTSQVVSFKT 1014 HSP 2 Score: 99.3673 bits (246), Expect = 9.497e-21 Identity = 144/659 (21.85%), Postives = 251/659 (38.09%), Query Frame = 0
Query: 656 WEKDGRQL---PFNDRQTVYRNGTLAIS----NVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIGGISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKRLD-TNVDPRYTIREESQEDGMLSTISIKRTQRE-DSALFTCVATNAFGSDDTSINLIIQEKPETPYGLKVVDKTGRTVKLSWQAPYNGNSNLTRYVIEFKPIKGTWANDVDHVLVPG-----DQTMAGVFSLRPATSYHFRVVAQNDIGVSGPSDTVTIETAEEAPSGPPVDIRVAAVDQHTLRMGQGPMSDEVLVHTAEGA-----PTQPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVYGPSKTWYDPSTRNTKVSTDNEAELTSLKKYTNYTVQVLAFTNGGDGVKSEVLTSTTEQDI--PGPPSSVKALAMSEEAILVSWQYPEEPNGKIIQYTVYIKE----LDRSRDIAPKTNKVNALQMSHQVDNLNKKARYEFWVTAHTTIGEGSPSIKVTLSPTNRIPA 1289
W+++G L FN R+ + NG+L S ++ D Y CVA S V +++ P P + +EP+D Q G A C + P+ + + +N+Q D Q ++ +IK G L I N++ + Y C + G V +PP+F +K R + L +L C A G I W + LD +++D R T + ++ I+ E DS + C A N S D + + + PE VV + + G+ V F P K W + + ++ D + + L + + ++ +A N +G ++++ + ++V + D + +G+ P + +++ I +TWSSP + G I GY V Y + + +T+ +E + L T+Y +VLAF G G SE++T +T+ DI PGP +++ + +ILV+W P G I QY V ++ +RS + +M + + +L + Y FWV+A GEG S ++ + IPA
Sbjct: 48 WKRNGHYLQYPDFNGRRRLLSNGSLHFSWIYNSLTDPRDEGIYQCVAXVKGLGKIVSKTAVLIVKDP---------------------------------PSFELEPSDLQVFLGQTAAFQCLLE---TPDNSEDELSSDNIQRL---KDDQPLILNHRISIKP-SGMLEIINVEPSDRAKYSC-----VYGEELKTSSLVNSPPNFIVKPRNRAVLQGTTLILDCAANGVPQPEITWLKDGASLDMSHLDSRLTKLGKG-------SLKIQDLNAETDSGAYQCRAENTEDSQDVTAIVEVHSAPEF-----VVRPSNQMCSA------KGDITFECKVQSFPPAKVQWYKNGELIVTSDYFQIVDGSNLRILGLLDSDAGMYQCMATNSVG--------NVQSSAQ--------LKVISNVVSPSLSSVSSSLDSSPSNDDQGSFIFLDXPSAPIXFHVAIXATRFITLTWSSP--LNPEGTILGYTVYYKEKGSERERVMNSTRGEL-SEVNIQGLTPGTSYEFRVLAFNENGRGEYSEMITVSTQDDIDVPGPVRNLRCRPTASFSILVAWDTPSTDTGFITQYKVCHRQGEYGFERSTIVK---------KMKYHLTDLREYTDYTFWVSASNANGEGVHSEEIKCMTYSDIPA 615 HSP 3 Score: 95.1301 bits (235), Expect = 1.818e-19 Identity = 80/296 (27.03%), Postives = 122/296 (41.22%), Query Frame = 0
Query: 235 YQQEASNEYVIVGNSALFKC--EVPSFVADVVDLVGWIDSEGTSFDRSQHSNYDGKYVVLPSGELQIRNVSPDDGFKTYKCRTKHRLTGETKLSATAGKLVITEPLASGKPKFSSIVKLSAFQKTQGGNIAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDDRVKQVG-GTLIIKEAKVD-DSGKYLCMVNNSVGGESVETVLTVTAPLSVEVEPKQQVVDYGRSATFKCHYDGNPVKSVYWLKNGEPVGHTE-------TTLRINSVKKEDRGMYQCFVRNDQESAQATGELKL 519
++ E S+ V +G +A F+C E P D + Q + + + PSG L+I NV P D K S G+ + T L + P F IVK QG + + C A G P P W K + + LD R+ ++G G+L I++ + DSG Y C N+ + V ++ V + V P Q+ TF+C P V W KNGE + ++ + LRI + D GMYQC N + Q++ +LK+
Sbjct: 117 FELEPSDLQVFLGQTAAFQCLLETPDNSEDELS-----SDNIQRLKDDQPLILNHRISIKPSGMLEIINVEPSD---------------RAKYSCVYGEELKTSSLVNSPPNF--IVKPRNRAVLQGTTLILDCAANGVPQPEITWLK---DGASLDMSHLDSRLTKLGKGSLKIQDLNAETDSGAYQCRAENTEDSQDVTAIVEVHSAPEFVVRPSNQMCSAKGDITFECKVQSFPPAKVQWYKNGELIVTSDYFQIVDGSNLRILGLLDSDAGMYQCMATNSVGNVQSSAQLKV 387 HSP 4 Score: 72.4034 bits (176), Expect = 1.424e-12 Identity = 84/363 (23.14%), Postives = 151/363 (41.60%), Query Frame = 0
Query: 281 QHSNYDGKYVVLPSGELQIRNVS------PDDGFKTYKCRTKHRLTGETKLSATAGKLVITEPLASGKPKFSSIVKLSAFQKTQGGNIAVTCPAQGYPIPVFRWYKFMESNNNKKL-----VALDDRVK-QVGGTLIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVTAPLSVEVEPKQQVVDYGRSATFKCHYDGNPVKSVYWLKNGEPV--GHTET--------TLRINSVKKE-DRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNV 620
Q+ +++G+ +L +G L + D+G Y+C + G K+ + L++ +P P F ++ S Q G A C + + S+N ++L + L+ R+ + G L I + D KY C V GE ++T V +P + V+P+ + V G + C +G P + WLK+G + H ++ +L+I + E D G YQC N ++S T +++ PEFV ++ +C + P +V+W+ G + Q+ + N ++ L+ G Y+C A++ VG V SA+L V
Sbjct: 56 QYPDFNGRRRLLSNGSLHFSWIYNSLTDPRDEGI--YQCVAX--VKGLGKIVSKTAVLIVKDP-----PSFE--LEPSDLQVFLGQTAAFQCLLETPD----NSEDELSSDNIQRLKDDQPLILNHRISIKPSGMLEIINVEPSDRAKYSC-----VYGEELKTSSLVNSPPNFIVKPRNRAVLQGTTLILDCAANGVPQPEITWLKDGASLDMSHLDSRLTKLGKGSLKIQDLNAETDSGAYQCRAENTEDSQDVTAIVEV---HSAPEFVVRPSNQMCSAKGDITFECKVQSFPPAKVQWYKNGELIVTSDYFQI--VDGSNLRILGLLDSD------AGMYQCMATNSVGNVQSSAQLKV 387 HSP 5 Score: 68.5514 bits (166), Expect = 1.957e-11 Identity = 77/317 (24.29%), Postives = 118/317 (37.22%), Query Frame = 0
Query: 413 DSGKYLCMVNNSVGGESVE--TVLTVTAPLSVEVEPKQQVVDYGRSATFKCHY-------DGNPVKSVYWLKNGEP--VGHTET-----TLRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAE-----------SDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAP--YVRKMLPMKVVAGKSMFVTCPVAGYPISSVTWEKDGRQLPFNDRQTVYRNGTLAISNVQRKEDASTYTCVARNDEG 700
D G Y C+ G+ V VL V P S E+EP V G++A F+C D ++ LK+ +P + H + L I +V+ DR Y C + +++ PP F+ G + L C A G P PE+ W G+ + G L++ N++ G Y+C+A + +A + V+ AP VR M G F C V +P + V W K+G + +D + L I + DA Y C+A N G
Sbjct: 86 DEGIYQCVAXVKGLGKIVSKTAVLIVKDPPSFELEPSDLQVFLGQTAAFQCLLETPDNSEDELSSDNIQRLKDDQPLILNHRISIKPSGMLEIINVEPSDRAKYSCVYGEELKTSSLVNS--------PPNFIVKPRNRAVLQGTTLILDCAANGVPQPEITWLKDGASLDMSHLDSRLTKLGKGSLKIQDLNAETD---------------SGAYQCRAENTEDSQDVTAIVEVHSAPEFVVRPSNQMCSAKGDITF-ECKVQSFPPAKVQWYKNGELIVTSDYFQIVDGSNLRILGLL-DSDAGMYQCMATNSVG 377 HSP 6 Score: 53.5286 bits (127), Expect = 7.442e-7 Identity = 48/172 (27.91%), Postives = 78/172 (45.35%), Query Frame = 0
Query: 25 PVFIQEPPNQMDFSNTTGTEIICQSRGTPMPQITWVKGDGSI-VQDVPGLRKVMANGNLVLPPFRAEDYNQEVHAQTYRCIAENTLGKVQSRDVQVRAVVHQSYDVYVEMEHVIMG--NDVLFKCKIPSYVTDLVQVLDWVESHGNSLKTAPNFVVIQPFETDVGKEYVILG 193
P FI +P N+ TT + C + G P P+ITW+K S+ + + + G+L + +D N E + Y+C AENT S+DV VH + + V + + D+ F+CK+ S+ VQ W + +G + T+ F ++ G ILG
Sbjct: 207 PNFIVKPRNRAVLQGTTLI-LDCAANGVPQPEITWLKDGASLDMSHLDSRLTKLGKGSL-----KIQDLNAETDSGAYQCRAENT---EDSQDVTAIVEVHSAPEFVVRPSNQMCSAKGDITFECKVQSFPPAKVQ---WYK-NGELIVTSDYFQIVD------GSNLRILG 359
BLAST of down syndrome cell adhesion molecule isoform x1 vs. L. salmonis genes
Match: EMLSAG00000011416 (supercontig:LSalAtl2s:LSalAtl2s789:132799:170277:1 gene:EMLSAG00000011416 transcript:EMLSAT00000011416 description:"maker-LSalAtl2s789-snap-gene-0.23") HSP 1 Score: 130.954 bits (328), Expect = 2.249e-31 Identity = 122/463 (26.35%), Postives = 195/463 (42.12%), Query Frame = 0
Query: 444 VEPKQQVVDYGRSATFKCHYDGNPVKSVYWLKNGEPV-GHT-----ETTLRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYG------SEAESDGVLQVGSFNS-----DNGDVVSYLNISQARTKYGGTYECQASSKVGL-VSHSAKLNVNGAPYVRKML---PMKVVAGKSMFVTCPVAGYPISSVTWEKDGRQLPFND-------RQTVYRNGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGS--LIIKNIKKGNEGYYLCKASNGIGGISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEA 876
V P +Q++D GR A +C + S++W K G + H + TL+I ++++ED GMYQCFVR D A A+ EL+LG P F T QPGP+VSLKC ++G P P + W + G DG Q F+ DNG ++ IS+ K G Y C AS++ G S S L V P + +++ SM + PI S+TW ++ P +D Q L I +++ + +A+ +TCVA+N G + S + V P + F+F K+ + +G + +C+I GD PL +++W K + D N R +I + + L I ++ + G Y C A N + S + + ++ PP + K A+ ++ C
Sbjct: 1 VVPSEQIIDIGRKARLECLTESRDRDSIHWKKXGRXLPSHNRILTNKQTLQIFNLQREDYGMYQCFVRRDXYEAXASSELRLGDA--SPVLTYRFIDQTLQPGPLVSLKCTSRGSPTPGITWSLNGFPLPDNERFMMDG--QKLPFDRRHLVFDNGTLI----ISKVIRKDTGRYFCTASNRQGTSASQSGDLKVLVPPTINHFSVGEHLRLSQRVSMLCSITDGDLPI-SLTWYRNSE--PLSDGGDGISLTQIGDYESVLRIDDLKPQHNAN-FTCVAKNSAGITQYSQY-LRVKVAPVVESFTFPKN-LTQGKRLRAICTIIEGDLPL--------------------------------DVSWSK------------DGSPLIDVPNVRITRIDEYTSLLAISKLESLHTGNYSCMAENAVAKHSTSSYLTIKVPPEWVTKPHDLEAVEGQDVFFHCRV 405 HSP 2 Score: 121.709 bits (304), Expect = 2.577e-28 Identity = 147/590 (24.92%), Postives = 227/590 (38.47%), Query Frame = 0
Query: 395 DRVKQVGGTLIIKEAKVDDSGKYLCMVNNSV--GGESVETVLTVTAPLSVEVEPKQQVVDYGRSATFKCHYDGNPVKSVYWLKNGEPVGHTET--------------------TLRINSVKKEDRGMYQCFVRNDQ-ESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKC-VAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAPYVRKM-LPMKVVAGKSMFVTCPV--AGYPISSVTWEKDGRQLPFNDRQTVYR----NGTLAISNVQRKEDASTYTCVARNDEG-YSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKI-IDGSLIIKNIKKGNEGYYLCKASNGIGG-ISAVAKIAVQAPPSFEIKKR-TQTALISENTVLQCEAKGEKPIGILWNMNNK-RLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFGSDDTSINLII 948
+R+ TL I + +D G Y C V S E L +P+ + Q + G + KC G+P + W NG P+ E TL I+ V ++D G Y C N Q SA +G+LK+ PP + VS+ C + GD + W+ SE SDG G + GD S L I + ++ + C A + G+ +S L V AP V P + GK + C + P+ V+W KDG L + R LAIS ++ + Y+C+A N +S S LT+ V P W +P D + +G D C+ + V N R P RN K+ I+G+L I+ + +EG +LC+A NG+ + V + + APP FE T + E LQC A G+ I + W + + L T R T E + D + S + I+ D+ ++C+A+NAFG + +++ +
Sbjct: 41 NRILTNKQTLQIFNLQREDYGMYQCFVRRDXYEAXASSELRLGDASPV-LTYRFIDQTLQPGPLVSLKCTSRGSPTPGITWSLNGFPLPDNERFMMDGQKLPFDRRHLVFDNGTLIISKVIRKDTGRYFCTASNRQGTSASQSGDLKV---LVPPTINHFSVGEHLRLSQRVSMLCSITDGDLPISLTWY-RNSEPLSDG--GDGISLTQIGDYESVLRIDDLKPQHNANFTCVAKNSAGITQYSQYLRVKVAPVVESFTFPKNLTQGKRLRAICTIIEGDLPLD-VSWSKDGSPLIDVPNVRITRIDEYTSLLAISKLESLHTGN-YSCMAENAVAKHSTSSYLTIKVP------------------------------------PEWVTKPHDLEAVEGQDVFFHCRVS---------EANVRTNGNRRRIPLLELSSQRPVYRNYKLLINGTLYIRKVTDTDEGSFLCEAENGVNEPLGQVVHLKINAPPKFENSHVGVITGRMEEAIELQCVASGDDHISMTWRKDGRDYLTTPGKSRTT--EIRELDKVTSKLRIENANINDAGKYSCLASNAFGKSNYGMDVTV 574 HSP 3 Score: 82.4185 bits (202), Expect = 5.652e-16 Identity = 111/516 (21.51%), Postives = 201/516 (38.95%), Query Frame = 0
Query: 362 IAVTCPAQGYPIPVFRWY----------KFMESNN----NKKLVALDDRVKQVGGTLIIKEAKVDDSGKYLCMVNNSVGGESVET-VLTVTAPLSVEVEPKQQVVDYGRSATFKCHY-DGNPVKSVYWLKNGEP------------VGHTETTLRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAP-YVRKMLPMKVVAGKSMFVTCPVAGYPISSVTWEKDGRQLP---FNDRQTVYR------NGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIG 839
+++ C ++G P P W +FM +++ + D+ GTLII + D+G+Y C +N G + ++ L V P ++ + + + + C DG+ S+ W +N EP +G E+ LRI+ +K + + C +N Q + L++ + P F TQ + ++ + +GD +V W GS +++ + + S L IS+ + + G Y C A + V S S+ L + P +V K ++ V G+ +F C V+ ++V + R++P + ++ VYR NGTL I V ++ S + C A N + + + PP + + V R +E + ++ C A G +TW+K + L TP + + R + + L I+N + G Y C ASN G
Sbjct: 104 VSLKCTSRGSPTPGITWSLNGFPLPDNERFMMDGQKLPFDRRHLVFDN------GTLIISKVIRKDTGRYFCTASNRQGTSASQSGDLKVLVPPTINHFSVGEHLRLSQRVSMLCSITDGDLPISLTWYRNSEPLSDGGDGISLTQIGDYESVLRIDDLKPQHNANFTCVAKNSAGITQYSQYLRV--KVAPVVESFTFPKNLTQGKRLRAICTIIEGDLPLDVSWSKDGSPLIDVPNVRITRID----EYTSLLAISKLESLHTGNYSCMAENAVAKHSTSSYLTIKVPPEWVTKPHDLEAVEGQDVFFHCRVSE---ANVRTNGNRRRIPLLELSSQRPVYRNYKLLINGTLYIRKVTDTDEGS-FLCEAENGVNEPLGQVVHLKINAPPKF-------------ENSHVGVITGRMEEAI--------------------ELQCVASGDDHISMTWRKDGRDYLT---TPGKSR---TTEIRELDKVTSKLRIENANINDAGKYSCLASNAFG 564 HSP 4 Score: 72.0182 bits (175), Expect = 9.479e-13 Identity = 78/323 (24.15%), Postives = 124/323 (38.39%), Query Frame = 0
Query: 637 GKSMFVTCPVAGYPISSVTWEKDGRQLPFNDRQTVYRNGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTP-NDYQDFDAS----NDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIG-GISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCE-AKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFGSDDTSINLIIQEKP 952
G+ + C S+ W+K GR LP ++R + TL I N+QR ED Y C R D Y A + + + + ++ + F D+ G + C + G P P ITW +L P P N+ D + R++ +G+LII + + + G Y C ASN G S + V PP+ + +S+ + C G+ PI + W N++ L D + E S + I + + +A FTCVA N+ G S L ++ P
Sbjct: 11 GRKARLECLTESRDRDSIHWKKXGRXLPSHNR-ILTNKQTLQIFNLQR-EDYGMYQCFVRRDX-YEAXASSELRLGDASPVLTYRF---------------------------------IDQTLQPGPLVSLKCTSRGSPTPGITW------SLNGFPLPDNERFMMDGQKLPFDRRHLVFDNGTLIISKVIRKDTGRYFCTASNRQGTSASQSGDLKVLVPPTINHFSVGEHLRLSQRVSMLCSITDGDLPISLTWYRNSEPLSDGGDGISLTQIGDYE----SVLRIDDLKPQHNANFTCVAKNSAGITQYSQYLRVKVAP 287 HSP 5 Score: 55.8398 bits (133), Expect = 9.457e-8 Identity = 37/153 (24.18%), Postives = 67/153 (43.79%), Query Frame = 0
Query: 1237 PKTNKVNALQMSHQVDNLNK-----------KARYEFWVTAHTTIGEGSPSIKVTLSPTNRIPAKIASFDDDFVAMVKQDVKLPCIAVGSPNPQLHWKMRGQPIPKNDRI----RQLP---------DGSLQITRVLKEDTGKYVCMVNNKYG 1365
P N++ + + Q+ NL + + YE ++ +G+ SP + P + S L C + GSP P + W + G P+P N+R ++LP +G+L I++V+++DTG+Y C +N+ G
Sbjct: 38 PSHNRILTNKQTLQIFNLQREDYGMYQCFVRRDXYEAXASSELRLGDASPVLTYRFIDQTLQPGPLVS--------------LKCTSRGSPTPGITWSLNGFPLPDNERFMMDGQKLPFDRRHLVFDNGTLIISKVIRKDTGRYFCTASNRQG 176
BLAST of down syndrome cell adhesion molecule isoform x1 vs. L. salmonis genes
Match: EMLSAG00000007100 (supercontig:LSalAtl2s:LSalAtl2s3:931395:944048:1 gene:EMLSAG00000007100 transcript:EMLSAT00000007100 description:"maker-LSalAtl2s3-augustus-gene-9.8") HSP 1 Score: 134.42 bits (337), Expect = 2.514e-31 Identity = 196/806 (24.32%), Postives = 310/806 (38.46%), Query Frame = 0
Query: 219 DGSEIRPGQIHVVYQPYQQEASNEYVIVGNSALFKCEVPSFVADVVDLVGWI---------------DSEGTSFDRSQHSNYDGKYVVLPSGELQIRNVSPDDGFKTYKCRTKHRLTGETKLSATAGKLVITEPLASGKPKFSSIVKLSAFQKTQGGNIAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDDRVKQVG--GTLIIKEAKVDDSGKYLCMVNNSVG-GESVETVLTVTAPLSVEVE-PKQQVVDYGRSATFKCHYDGNPVKSVYWL-------KNGEPVGHTE----------TTLRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFD-AVTTQPGPM-VSLKCVAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNG---APYVRKML-PMKVVAGKSMFVTCPVAGYPISSVTWEKDGRQ-LPFNDRQTVYRN--GTLA-ISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLI---IKNIKKGNEGYYLCKASNGIGGISAVAKIAVQA---PPSFEIKKRTQTALISENTVLQCEAKGEKPIG------ILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFGSDDTSINLIIQE-----KPETPYGLKVV 961
+G + + + V ++P Q G+ A ++ +F VD I + E T F S DG + V L I++V +D Y+C +R+ + L A V+TE +P F L T G C G P P W++ + K ++ + + G + ++ D G+ N VG ES V ++E + P+ V G+ DG+P + WL +GE V TE TTLRI S K ED G Y V+N + + + G+ PP+ V + T PG + L C G P P +KW+ G+E + ++ G S + + L + + + GT + ++ G A + V P +L K V G + + V+G+P + W K+ + +P DR ++N GT I +D TYT VA + EG ARS+ VT+ K + EG + + +RP D +G +I C G P PE +W K +P +++R DG LI + N K + G Y C SN +G I+ V + V PP F T L + ++ C+A+ +G I W N K +D +YTI+ +G + T+ +K+ D + C+ATN G+ D+S L I E K + P LK +
Sbjct: 762 NGEDFKEASLEVQFKPEIQAPEEFKAGPGDEASLSFKIRAFPGAEVDFYKKIAQEEGEPKMDKIEKGNKEYTRF--STEMTEDGTFEV---HSLIIKDVVMEDS-GEYECLXSNRIGNTSSLVKFA---VVTE-----EPSFPK--SLEDITTTLGSTETFECIVAGIPRPEIAWFRGDKELKKGKRXLFEEELAENGIKYKMTTRDIVFKDFGQIKLTAKNMVGESESTAIFQIVQIKPTIEADFPRMIEVKEGKEFVLTAKIDGSPPPTAIWLCEGEEIKADGERVIITEEEAEDGSGIITTLRITSAKDEDNGKYTLLVKNTAGEEKMDTMVDIVGKPKPPKVVKEIEPKEITIPGKKELRLTCKISGYPMPTIKWYRDGNEIK----VRKGVLISQDASGGATLVLEKCQMXDAGTXSAKGXNEXGDAETFANVTVTQPMEEPKFTSLLRSAKAVEGSPIKLEGKVSGHPQPEIKWLKNEVEFIPDGDRVQSFQNEDGTFGLIFECTNADDKGTYTAVAVSPEGM-ARSNGNVTI------------KSRMKEG--------VDKSKPSFVRPM-----GDVAVDEGQKLRITCPVKGNPIPEFSWTK------DGKPI---------ASERAHCFSDGELIGIEVINSKMEDAGAYECHLSNELGTITGVCNVKVNKIYQPPFF------STPLNNVKQIVGCDARFVCDVGCNPKPDITWTFNGKPIDDG--GKYTIKT----NGNMRTLCVKKINDADIGTYKCIATNKEGTKDSSGTLEIVEFIEKGKSDAPEFLKKI 1494 HSP 2 Score: 93.2041 bits (230), Expect = 8.799e-19 Identity = 169/796 (21.23%), Postives = 296/796 (37.19%), Query Frame = 0
Query: 226 GQIHVVYQPYQQEASNEYVIVGNSAL--FKCEVPSFVADVVDLVGWI-----------DSEGTSFDRSQHSNYDGKYVVLPSGE-----LQIRNVSPDDGFKTYKC---RTKHRLTGETKLSATAG-KLVITEPLASGKPKFSSIVKLSAFQKTQGGNIAVTCPAQGYPIPVFRWYKF---MESNNNKKLVALDDRVKQVGGTLIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVT-AP-LSVEVEPKQQVVDYGRSATFKCHYDGNPVKSVYWLKNGEPVGHTETTLRINSVK--------------KEDRGMYQCFVRNDQESAQATGELKLGGRFDP---PEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAPYVRKMLPMKVVAGKSMFVTCPVAGYPISSVTWEKDGRQLPFND-RQTVYRNGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCS-ISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIGGISAVAKIAVQAPPSFEIKKRTQTALISENTV-LQCEAKGEKPIGILWNMNNKRLDTNVD------PRYT-IREESQEDGMLS--TISIKRTQREDSALFTCVATNAFGSDDTSINL-IIQEKPETPYGLKVVDKT 964
G V+ + E + +Y +V ++ L +C V D D+ + + T F Q + + ++ VL E L ++++P+D Y C + +++ +LS G ++ EP KPK + L + GG+ + +GYP P +W K + ++++ K V D Q LII + + +D+G Y + N +G S E LT++ AP +E ++ VD K GNP + W KNG P+ RI S+K +D G + RN A GE+ F P+F + V G LKC P PEVKWF G+E D ++V + NG + L I+ G YE +A + +G + + VN P + +V G P W K+G+ + D R + N + + ++ V +D+G + + N +V I + L P+ + K+ +G K G P PE+ W N++++ +D+ + ++ +D + I + + G A N G A + VQ P + + + E ++ + A + + + + +D YT E EDG ++ IK EDS + C+ +N G+ + + ++ E+P P L+ + T
Sbjct: 169 GSYEVIIHDVKAEDAGQYSVVASNTLGTEQCAASISVKDAKDVFSLLRGHEKKVAPGEEPTFTWFKSGQEFDPEDRFKVLFKDEEDTLALVFQHINPEDA-GXYTCVASTSTGKISCSAELSVEGGVSQLLKEP---EKPKI--LTGLGDADSSVGGSAMLELKMRGYPRPSIKWTKDGQPITASDHFKFVYPD----QESVALIINKVQPEDAGAYKVTLTNDLGEASSEGKLTLSGAPQFQDTIEDQKTAVDDAWKIVTKVS--GNP--ELTWYKNGVPITLDS---RIKSIKVDPETFELVFAKTLADDNGNWAVIARN------AHGEMSQFFEFSAQMLPKFETRLIDVEANEGKQAILKCKINCSPDPEVKWFKGGTEITKDPRVKV--YKDPNG--LDCLTINSCSRGMAGEYEVKAINDMGTAACKCTIKVNTKPSCDDLDDYEVFEKDDFTFAVECDGNPKPVCKWTKEGQSIDTKDGRFVITENNGVYMLGIKE---------VTXDDKG--------------------XYXXEFTNRAGDRKVQSELIVHSADELKIPKCMSDLKSKKAEKGGKTFFQIKIRGDPIPEVKW---YFNDIEV--VNDDHFQVSVKENEHMYRLD----VVGISEEHYGKVRVVAKNENGEDFKEASLEVQFKPEIQAPEEFKAGPGDEASLSFKIRAFPGAEVDFYKKIAQEEGEPKMDKIEKGNKEYTRFSTEMTEDGTFEVHSLIIKDVVMEDSGEYECLXSNRIGNTSSLVKFAVVTEEPSFPKSLEDITTT 899 HSP 3 Score: 85.8853 bits (211), Expect = 1.159e-16 Identity = 94/411 (22.87%), Postives = 166/411 (40.39%), Query Frame = 0
Query: 326 SATAGKLVITEPLASGKPKFSSIVKLSAFQKTQGGNIAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDDRVKQV---GGT--LIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVTAPLSVEVEPKQ---------QVVDYGRSATFKCHYDGNPVKSVYWLKNGEPVGHTETT---------LRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNV--------NGAP-YVRKMLPMKVVAGKSMFVTCPVAGYPISSVTWEKDGRQLPFNDRQTVYRNGT----LAISNVQRKEDASTYTCVARNDEG 700
+ T + +T+P+ +PKF+S+ L + + +G I + G+P P +W K N + + DRV+ GT LI + DD G Y + + G +T+ + + V+ + VD G+ C GNP+ W K+G+P+ + + + K ED G Y+C + N+ + +K+ + PP F + + V G C +P P++ W G + G + + NG++ + L + + GTY+C A++K G S L + + AP +++K+ V G S T V G P + +G+ L DR + R T L+++ V+ + D Y N G
Sbjct: 1173 AETFANVTVTQPME--EPKFTSL--LRSAKAVEGSPIKLEGKVSGHPQPEIKWLK-----NEVEFIPDGDRVQSFQNEDGTFGLIFECTNADDKGTYTAVAVSPEGMARSNGNVTIKSRMKEGVDKSKPSFVRPMGDVAVDEGQKLRITCPVKGNPIPEFSWTKDGKPIASERAHCFSDGELIGIEVINSKMEDAGAYECHLSNELGTITGVCNVKVNKIYQPPFFSTPLNNVKQIVGCDARFVCDVGCNPKPDITWTFNGKPIDDGGKYTIKT----NGNMRT-LCVKKINDADIGTYKCIATNKEGTKDSSGTLEIVEFIEKGKSDAPEFLKKIGDELVFRGMSARFTALVTGTPEPDYEFFFNGKPLYPTDRIHIVRERTGLIRLSMAYVE-ESDIGVYGLKVTNTHG 1568 HSP 4 Score: 70.4774 bits (171), Expect = 5.979e-12 Identity = 115/532 (21.62%), Postives = 204/532 (38.35%), Query Frame = 0
Query: 449 QVVDYGRSATFKCHYDGNPVK----SVYWLKNGEPVG------------HTETTLRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPE-----------FVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSY-LNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAPYVRKML---PMKVVAGKSMFVTCPVAGYPISSVTWEKDGRQLPFNDR-QTVYRNGTLAISNVQRK---EDASTYTCVARNDEG-YSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRP-TPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIGGISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEAKGEKPI-----GILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFG 938
Q+ D G A F C D +K + WLK+ +P+ +L +++V+ D G Y C V + +A + P E F+ S KG+P P+VK+ G+E + D + N D+ SY + I + + G Y AS+ +G +A ++V A V +L KV G+ + TW K G++ DR + ++++ ++ V + EDA YTCVA G S ++L+V EG +Q++ EP +P+ D + G A ++ K G+P+P I W K +P T +D+ F + ++ +LII ++ + G Y +N +G S+ K+ + P F+ Q + + + + G + G+ ++++ VDP E+ E + +T +D+ + +A NA G
Sbjct: 12 QLCDPGEGAYFNCATD---IKFQGLTATWLKDNKPLDASVADRTKLLAKENHFSLDLSNVQPGDSGQYSCRVTGEGGTAITCSAVLEVHTLSPAEKREREESNHPVFLVKLRDADVILSSTASFMIHVKGNPNPDVKFLKDGTEIKEDSHFTI---NRDHAPHGSYEVIIHDVKAEDAGQYSVVASNTLGTEQCAASISVKDAKDVFSLLRGHEKKVAPGEE------------PTFTWFKSGQEFDPEDRFKVLFKDEEDTLALVFQHINPEDAGXYTCVASTSTGKISCSAELSV-------------------EGGVSQLL------KEPE-KPKILTGLGDADSSVGGSAMLELKMRGYPRPSIKWTK------DGQPITASDHFKFVYPDQESV-----ALIINKVQPEDAGAYKVTLTNDLGEASSEGKLTLSGAPQFQDTIEDQKTAVDDAWKIVTKVSGNPELTWYKNGVPITLDSRIKSIKVDP------ETFE------LVFAKTLADDNGNWAVIARNAHG 476
BLAST of down syndrome cell adhesion molecule isoform x1 vs. L. salmonis genes
Match: EMLSAG00000008452 (supercontig:LSalAtl2s:LSalAtl2s518:328679:339984:1 gene:EMLSAG00000008452 transcript:EMLSAT00000008452 description:"maker-LSalAtl2s518-augustus-gene-2.23") HSP 1 Score: 132.88 bits (333), Expect = 6.814e-31 Identity = 188/806 (23.33%), Postives = 308/806 (38.21%), Query Frame = 0
Query: 361 NIAVTCPAQGYPIPVFRWYKFMESNNN---KKLVAL-DDRVKQVGGTLIIKE-AKVDDSGKYLCMVNNSVG---GESVETVLTVTAPLSVEVEPKQQVVDYGRSATFKC---HYDGNPVKSVYWLKNGEPVGHTETTLRI----------NSVKKEDRGMYQCFVRNDQESAQATG---ELKLG-------GRFDPPEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAP-YVRKMLPMKVVAGKSMFVTCPVAGYPISSVTWEKDGR-------QLPFNDR-QTVYRNGTLAISNVQRKEDASTYTCVARND-EGYSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIGGISAVAKIAVQAPPSFEIKKRTQTALI---SENTVLQCEAKGEKPIGIL--WNMNNKRLDTNVDPR-YTI----REESQEDGMLSTIS-------------------------------IKRTQRE-----------DSALFTCVATNAFGSDDTSINLIIQEKPETPYGLKVVDKTGRTVKLSWQAPYNGNSNLTRYVIE--------FKPIKG-TWANDVDHV----LVPGDQTMAGVFSLRPATSYHFRVVAQNDIGVSGPSDTVTI-ETAEEAPSGPPVDIR 1059
+I++ C A G+P P + WY SN++ +K+ L D R+ GG LII V D GKY C +N G SV + + +++G+S + C Y P+ YW ++ P + E RI +SV+K D G Y C V++ S+ TG LK+ RF P F F G V ++C++ G P W GS+ D ++ N + V L I + + + G Y C+A + +S S KL++ P + + + V + TC G P W K+ + +L DR + ++ L I V K D Y C+A ND + + L V P SF K + E FA A+G + I CK +G P PE W+K N ++ S + I GSL I+ + + + C+ASN G + ++ V+ PSF+ + + +I + L+C+A + + + W++NN ++ + D Y + E Q G LS +S +R R+ ++ + C+ +A G +II P P + V + ++ + W S + Y IE F +K A ++ ++ V G + + L P ++Y FRV A ND+G+ S+ I T + P+ P +IR
Sbjct: 299 DISLLCIAHGWPTPTYSWYSEFFSNDSYTEQKVDPLKDSRITISGGQLIINNPNSVTDRGKYFCQASNKFGTIRSRSVTIAFGFIGEFILRRNYETGDINWGKSIS--CDPPQY--FPLVKFYWNRDYFP-NYVEEDRRIMVSYDGNLYFSSVEKIDEGNYSCSVQSSVASSGRTGPFFRLKVSPHPNYQQLRF-PQNFPKIFPEAPV-AGQYVRMECISFGYPVAHYNWTRKGSDIPKDALVT-------NHNRV--LIIPRVKVEDQGEYICRAYNDKLSISASVKLSIQSRPVFTISIGDLHVDEKDDVTWTCEAFGIPDVKYKWLKNAKLLKTGDDKLAIEDRGRYEIKDNVLIIRQVS-KRDQGMYECLAYNDLDARYSSGQLRVLSFSP------SFDKYPLEEKLFA---------------------------AEGGNITIKCKPEGAPTPEFVWRK---NGAKI-----------GSGGKYIIYKSGSLFIRRVNADDSAVFTCEASNEYGRAESTGRLIVKRGPSFQAGIKPKPLVIVNKGSSVNLKCKAVADPLLDMAYSWSLNNLKIRFSEDEENYRLLSLQNAEGQRIGGLSWLSELSDHQKLLQSSGQFLNHHSSYTKGTGNFNKFRRGNRDGYLKIYNISYAEAGKYICIVDSAVGRITAESQVIIHGPPGPPGSVSAVSLSSKSGTIIWTDGAIYGSQIKYYRIEGRTRDNSTFTTLKDYAEAQEITYLGRKPKVHGRRQYKIIDQLSPYSAYQFRVTAYNDLGLGEHSEPSPIYNTLPDKPTKTPTNIR 1040 HSP 2 Score: 92.8189 bits (229), Expect = 1.078e-18 Identity = 86/353 (24.36%), Postives = 142/353 (40.23%), Query Frame = 0
Query: 359 GGNIAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDDRVKQVGGTLIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVTAPLSVEVEPKQQVVDYGRSATFKCHYDGNPVKSVYWLKNG------------EPVGHTE---TTLRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFD------AVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAPYVR---KMLPMKVV-AGKSMFVTCPVAGYPI--SSVTWEKDGRQLPFNDRQTVYRNGTLAISNVQR 684
G + + C + GYP+ + W + LV +RV LII KV+D G+Y+C N S L++ + + VD T+ C G P WLKN E G E L I V K D+GMY+C ND ++ ++G+L++ F +FD + G +++KC +G P PE W G++ S G + S L I + + C+AS++ G + +L V P + K P+ +V G S+ + C P+ + +W + ++ F++ + YR +L + QR
Sbjct: 502 GQYVRMECISFGYPVAHYNWTRKGSDIPKDALVTNHNRV------LIIPRVKVEDQGEYICRAYNDKLSISASVKLSIQSRPVFTISIGDLHVDEKDDVTWTCEAFGIPDVKYKWLKNAKLLKTGDDKLAIEDRGRYEIKDNVLIIRQVSKRDQGMYECLAYNDLDARYSSGQLRVLS------FSPSFDKYPLEEKLFAAEGGNITIKCKPEGAPTPEFVWRKNGAKIGSGGKYIIYKSGS--------LFIRRVNADDSAVFTCEASNEYGRAESTGRLIVKRGPSFQAGIKPKPLVIVNKGSSVNLKCKAVADPLLDMAYSWSLNNLKIRFSEDEENYRLLSLQNAEGQR 834 HSP 3 Score: 59.3066 bits (142), Expect = 1.338e-8 Identity = 100/411 (24.33%), Postives = 165/411 (40.15%), Query Frame = 0
Query: 1072 QGPMSDEVLVHTAEGAPTQPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVYGPSKTW------YDPSTRNTKVSTDNEAELTSLKKYTNYTVQVLAFTNGGDGVKSEVLTSTTEQDIP-GPPSSVKALAMSEEAILVSWQY-----PEEPNGKIIQYTVYIKELDRSRDIAPKTNKVNALQMSHQVDNLNKKARYEFWVTAHTTIGEGSPSI------KVTLSP---TNRIPAKIASFDDDFVAMVKQDVKL-----PCIAVGSPNPQLHWKMRG--QPIPKNDRIRQLPDGSLQITRVLKEDTGKYVCMV--NNKYGQDMV----------THELVV--NGPP----DPPEVTITSQTTDTITVK--LKTSNPEDKTPVHGYILHYKPEFGDWNTAQIPFGSDE 1434
+GP+SD V +++AE P P V +S AI+VTW P+++ I+G K++ K W S S D EA + L T Y V+V+A+ + G G +SE T + P PP++V+ ++ I V+W+Y EEP + V + E D A T + ++ +L Y V A + GEG KV P + ++ I + D A++ D L PC+ + H + + + N ++ PD S+ I K Y +V N K ++V + EL + N PP E I +D + ++ L + + K + + K +F N +IPF +D+
Sbjct: 1127 EGPISDPVEIYSAEDLPQVAPTRVGARPFNSTAIRVTWL--PISNNRDKIRG-KLIGYRIKYWRRELEEISESQYLLSRSLDPEAFIIGLIPNTYYWVRVMAYNSAGPGPESERFLERTFKLRPQKPPTAVQVTGINPSTIRVTWRYVAPSVEEEP---LTGXKVRVWESDMDISQANDTVIYIGNPLDVEITDLTPGKVYHLRVLAFSQGGEGKIMYYPVGWPKVLQFPQLESGKLQQVICNLDKILCAILTSDSLLIWYIKPCVPI-----ICHRRCENSLEELGNNVSVQWKPDSSMLIVSTSKSHLIVYELVVPTNTKTLYELVESSYPTFKRESDELFIKENIPPLIFSKAYEFEIEGGISDVVAIREELMIATCDGKILRYSWQGEEKRDFS-LNLKRIPFCTDQ 1525 HSP 4 Score: 55.4546 bits (132), Expect = 2.137e-7 Identity = 75/334 (22.46%), Postives = 119/334 (35.63%), Query Frame = 0
Query: 297 LQIRNVSPDDGFKTYKCRTKHRLTGETKLSATAGKLVITEPLASGKPKFSSIVKLSAFQKTQGGNIAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDDRVKQVGGTLIIKEAKVDDSGKYLCMVNNSVG-GESVETVLTVTAP-LSVEVEPKQQV-VDYGRSATFKCHYDGNPVKSVYWLKNGEPVGHTETTLRINSVK---KEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAP 624
L IR VS D Y+C + L ++G+L + S P F +GGNI + C +G P P F W K N K+ + + G+L I+ DDS + C +N G ES ++ P ++PK V V+ G S KC K+V +P+ + +N++K ED Y+ + E + G L D + + + F+ + + G F N D YL I G Y C S VG ++ +++ ++G P
Sbjct: 639 LIIRQVSKRDQ-GMYECLAYNDLDAR----YSSGQLRV----LSFSPSFDKYPLEEKLFAAEGGNITIKCKPEGAPTPEFVWRK-----NGAKIGSGGKYIIYKSGSLFIRRVNADDSAVFTCEASNEYGRAESTGRLIVKRGPSFQAGIKPKPLVIVNKGSSVNLKC-------KAV-----ADPLLDMAYSWSLNNLKIRFSEDEENYRLLSLQNAEGQRIGGLSWLSELSDHQKLLQSSGQ-------------------------FLNHHSSYTKGTGNFNKFRRGNRD--GYLKIYNISYAEAGKYICIVDSAVGRITAESQVIIHGPP 919
BLAST of down syndrome cell adhesion molecule isoform x1 vs. L. salmonis genes
Match: EMLSAG00000004894 (supercontig:LSalAtl2s:LSalAtl2s257:333074:340050:1 gene:EMLSAG00000004894 transcript:EMLSAT00000004894 description:"maker-LSalAtl2s257-augustus-gene-3.36") HSP 1 Score: 124.79 bits (312), Expect = 1.549e-28 Identity = 149/618 (24.11%), Postives = 257/618 (41.59%), Query Frame = 0
Query: 357 TQGGNIAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDDRVKQVGGTLIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVTAPLSVEVEPKQQVVDYGRSATFKCHYDGNPVK--------SVYWLKNG--EPVGHTETTLRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVS---YLNISQARTKYGGTYECQASSKVGLVSHSAKLNV----NGAPYVRKMLPMKVVAGKSMFVTCPVAGYPIS-----SVTWEKDGRQLPFNDRQTVYRNGTLAISNVQRKEDASTYTC-VARNDEGYSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIGGISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKRLD--TN---VDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFGSDDTSINL 946
T+G ++++TC A G P P W K +++N + + D G LII+ V+D+G Y C+ N G + + V +V V+ + + + +C PV+ S+ W K+G E + + ET L I + KED+G Y C V + T L+L + P F+S + + T G V++ C A G P P++ W G V D+ VS L I G Y C A++ G +S + + V A +K+ + +++ + C V Y + W+KD + N + + + +L + N+ D TY C V E S+++ L V+ EPP IV +F +VM +G D +++C G P+P + W Q P N Y A+ + + + +I+KN+ K N+G Y C+A N G + VAK + + +RT+ A ISE+ + A + I N+ +++ TN V P ++ + G+ ++SI+ Q+ S + C+ T ++S+ +
Sbjct: 565 TEGSDVSITCNASGVPHPSIHWKK--DADN----IKVSD-----GENLIIRHIGVEDTGHYSCLAVNEYGSKQESLSIEVYNKTTVAVDKETLISETSDLVVLEC-----PVRLDKRLNIVSITWYKDGLNESISN-ETKLVIRNATKEDQGTYICRVETPVDVVNQT--LRLTVLSEGPSFLSTEEDIRTLEGTNVTVNCQANGLPIPKISWTNNG----------VQILKGDDRRTVSPLGDLTIHYVSLNDQGNYTCTATNIYGSISTQSTIEVILRSKMATDFKKVKNVIKNVRENVVLDCDVV-YDSRLDREIELLWKKDNLPIRINRSKYIAADNSLKVYNLDIS-DQGTYECQVNTPFESISSKTALIVS-GEPPKIV-----------SEFKKVM-----------------------LDEGEDLRLECLVRGVPRPTLVWY------FQDAPLTNAYVHEIATASKVFR--ESRVIVKNVTKANDGVYQCRADNDYG--TGVAKFS-----RVNVLRRTR-ATISESGEISIHAGTN--LKIPCNIEKDQMNQITNIQWVKPFKVGAKDRIDFGVDGSLSIQDVQKRHSGEYKCLVTTILDKANSSVTV 1098 HSP 2 Score: 123.635 bits (309), Expect = 3.423e-28 Identity = 176/763 (23.07%), Postives = 307/763 (40.24%), Query Frame = 0
Query: 296 ELQIRNVSPDDGFKTYKCRTKHRLTGETKLSATAGKLVITEPLASGKPKFSSIVKLSAFQKTQGGNIAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDDRVKQVG--GTLIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVT--APLSVEVEPKQQVVDYGR-SATFKCH--YDGNPVKSV--YWLKNGEPVG-------HTETTLRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDV-VSYLNISQARTKYGGTYECQASSKVGL-VSHSAKLNV--NGAPYVRKMLPMKVVAGKSMFVTCPVAG---YPISSVTWEKDGRQLPF----NDRQTVYRNGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTV-MEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKI-----------DCKA----------------------------DGFPKPEITWKKAVVNNLQMR-PTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIGGISAVAKIAVQAPPSFEIKKRTQTALISE--NTVLQCEAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFGSDDTSINLIIQ------------EKPETPYGLKVVDKTG-RTVKLSWQAP 975
+L IRN + +D TY CR ET + L +T + S P F S + + +G N+ V C A G PIP W +NN +++ DDR + V G L I ++D G Y C N G S ++ + V + ++ + + + V+ R + C YD + + W K+ P+ + +L++ ++ D+G Y+C V ES + L + G +PP+ VS F V G + L+C+ +G P P + W+ + + V ++ + + + V N+++A G Y+C+A + G V+ +++NV + + + + AG ++ + C + I+++ W K PF DR +G+L+I +VQ++ + Y C+ A S +TV+V + P I F+ +I +G+ + C+ + +P++ W TD + ++ KI +C A DG P K ++Q R P + D+D+ G L K++ + N G Y C S G A+ + ++ P + + I+E N L+C LW N N+ RE S G+L+ I+ Q EDS + C+A FG D + + E P L V +TG +V + W+ P
Sbjct: 687 KLVIRNATKEDQ-GTYICRV------ETPVDVVNQTLRLT--VLSEGPSFLSTEE--DIRTLEGTNVTVNCQANGLPIPKISW-----TNNGVQILKGDDR-RTVSPLGDLTIHYVSLNDQGNYTCTATNIYGSISTQSTIEVILRSKMATDFKKVKNVIKNVRENVVLDCDVVYDSRLDREIELLWKKDNLPIRINRSKYIAADNSLKVYNLDISDQGTYECQVNTPFESISSKTALIVSG--EPPKIVSEFKKVMLDEGEDLRLECLVRGVPRPTLVWYFQDAPLTNAYVHEIATASKVFRESRVIVKNVTKAN---DGVYQCRADNDYGTGVAKFSRVNVLRRTRATISESGEISIHAGTNLKIPCNIEKDQMNQITNIQWVK-----PFKVGAKDRIDFGVDGSLSIQDVQKRH-SGEYKCLVTTILD-KANSSVTVSVNVNAPFITSFTGENQMIFQGESLSLFCNSNGIPKPII--SWNFNKTDTKIDNNAEFKILNAIASDSGSYECVAKNQYGETRKIIFVRVIQXPPVDEEVAVDDGEPADLYCIKPNNYVHIQWRDPKEQNISDYDSET--------GVLHFKSVNQENIGEYSCIISLNNGRSRAIKR-HLRIKPEIIMSRNNTLVEITEGKNLTLECNVLPGIGAKRLWKHNE-----NIIIPGGNREVSNRGGLLTIEDIR--QDEDSGKYVCIAIADFGKDTIEYTVHVDPIPVSKKEVSCTESHSNPIFLFDVIRTGNESVLIRWEFP 1402 HSP 3 Score: 94.3597 bits (233), Expect = 3.435e-19 Identity = 136/609 (22.33%), Postives = 225/609 (36.95%), Query Frame = 0
Query: 363 AVTCPAQGYPIPVFRWYKFMESNNNKKLVALDDRVKQVGGTLIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVTAPLSVEVEPKQQVVDYGRSATFKCHYDGNP----VKSVYWLKNGEPVGHTETT---LRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAPYVRKMLPMKVVAGKSMFVT-CPV---AGYPISSVTWEKDGRQLPF-NDRQTVYRNGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIGGISAVAKIAV--QAPPSFEIKK-RTQTALISENTVLQC----EAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFGSDDTSINLIIQEKP 952
+V C A G P P W + S ++K+++ + + + +L I DS + C + G L P V V+ KC +P S+ WLK+ +P+ H T + I + + GMY C R ES +L + + P + G VS+ C A G P P + W + ++D + SD +++ I + G Y C A ++ G S + V V + + V CPV I S+TW KDG N+ + V RN T KED TY C V P +V + V++EG P + D + +G++ ++C+A+G P P+I+W T N Q + R + + G L I + ++G Y C A+N G IS + I V ++ + + KK + + EN VL C +++ ++ I +LW +N + N +Y + S + + D + C F S + LI+ +P
Sbjct: 394 SVQCSAHGDPEPRVSW---IWSVDDKEVIVNESTLLSLNTSLAI------DSTIFTCQAESVHGLTQRNFTLRAFEPTFVLQNDTTISVNASGKVILKCESAVDPRLESSSSITWLKDNKPLQHFITKDDEVLIPYLHLDHGGMYSCLTRTPLESVLVVQKLVVLV--ETPVIKLPVNVKRVTEGSDVSITCNASGVPHPSIHW-----KKDADNIKV-----SDGENLI----IRHIGVEDTGHYSCLAVNEYGSKQESLSIEVYNKTTVAVDKETLISETSDLVVLECPVRLDKRLNIVSITWYKDGLNESISNETKLVIRNAT--------KEDQGTYIC----------------RVETPVDVVNQTLRLTVLSEG------------------PSFLSTEEDIRTLEGTNVTVNCQANGLPIPKISW------------TNNGVQILKGDDRRTVSPL-GDLTIHYVSLNDQGNYTCTATNIYGSISTQSTIEVILRSKMATDFKKVKNVIKNVRENVVLDCDVVYDSRLDREIELLWKKDNLPIRIN-RSKYIAADNS--------LKVYNLDISDQGTYECQVNTPFESISSKTALIVSGEP 913 HSP 4 Score: 83.5741 bits (205), Expect = 5.738e-16 Identity = 149/634 (23.50%), Postives = 235/634 (37.07%), Query Frame = 0
Query: 404 LIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVTA--PLSVEVEPKQQVVDYGRSATFKCHYDGNPVKSVYWLKNGEPV--GHTETT------LRINSVKKEDRGMYQCFVRN--DQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCV----AKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAP--YVRKMLPMKVVAGKSMFVTCPVAGYPISSVTWEKDGRQL------PFNDRQTVYRNGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTV-EPTDKQFAQGSDAKIDCKADGFPKPEIT---WKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGI--GGISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEAKG-EKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFGSDDTSINLIIQEKPETPYGLKVVD---------KTGRTVKLSWQAPYNGNSNLTRY-----VIEFKPI 992
L+I+ A +D G Y+C V V + LTV + P + E + ++ G + T C +G P+ + W NG + G T L I+ V D+G Y C N S Q+T E+ L + +F + + +V L C ++ D E+ W + + + +DN V L+IS GTYECQ ++ +S L V+G P V + + + G+ + + C V G P ++ W L V+R + + NV + D Y C A ND G F++V L R R T+ E + G++ KI C + +IT W K + D DF +DGSL I++++K + G Y C + + S + V AP Q E+ L C + G KPI I WN N + DT +D + E +L+ I+ DS + CVA N +G I + + + P + V D K V + W+ P N++ Y V+ FK +
Sbjct: 688 LVIRNATKEDQGTYICRVETPVDVVNQTLRLTVLSEGPSFLSTEEDIRTLE-GTNVTVNCQANGLPIPKISWTNNGVQILKGDDRRTVSPLGDLTIHYVSLNDQGNYTCTATNIYGSISTQSTIEVILRSKM-ATDFKKVKNVIKNVRENVV-LDCDVVYDSRLDREIELLW---KKDNLPIRINRSKYIAADNSLKVYNLDISDQ-----GTYECQVNTPFESISSKTALIVSGEPPKIVSEFKKVMLDEGEDLRLECLVRGVPRPTLVWYFQDAPLTNAYVHEIATASKVFRESRVIVKNVTKANDG-VYQCRADNDYGTGV--------------------------AKFSRV--------NVLRRTRATISESGEISIHAGTNLKIPCNIEKDQMNQITNIQWVKP------FKVGAKDRIDFG---------VDGSLSIQDVQKRHSGEYKCLVTTILDKANSSVTVSVNVNAPFITSFTGENQMIFQGESLSLFCNSNGIPKPI-ISWNFN--KTDTKID-------NNAEFKILNAIA------SDSGSYECVAKNQYGETRKIIFVRVIQXPPVDEEVAVDDGEPADLYCIKPNNYVHIQWRDP--KEQNISDYDSETGVLHFKSV 1242 HSP 5 Score: 81.6481 bits (200), Expect = 2.422e-15 Identity = 147/666 (22.07%), Postives = 257/666 (38.59%), Query Frame = 0
Query: 412 DDSGKYLCMVNNSVGGESVE-TVLTVTAP-LSVEVEPKQQVVDYGRSATFKCHYDGNPVKSVYWL---KNGEPVGHTETTLRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDA-VTTQPGPMVSLKCVAKGDPAPE----VKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKV-GLVSHSAKLNVNGAPYVRKMLPM---KVVAGKSMFVTCPVAGYPISSVTWEKDGRQLPFNDRQTVYRNGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPFSFGKDVINE-GDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIGGISAVAKIAVQAP-PSFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFGSDDT--SINLIIQEKPETPYG--LKVVDKTGRTVKLSWQAPYNGNSNLTRYVIEFKPIKGTWANDVDHVLVPGDQTMAGVFSLRPATSYHFRVVAQN--DIGVSGPSDTVTIETAEEAPSGPP 1055
D SG Y C++ V VE VL V+AP + + +V+ + +C G+P V W+ + E + + T L +N+ D ++ C ES + R P FV D ++ V LKC + DP E + W + + LQ D+ ++ YL++ +GG Y C + + ++ + + P ++ LP+ +V G + +TC +G P S+ W+KD + +D + L I ++ ED Y+C+A N+ G S + L++ V + + +I+E D + C + DK+ S ITW K +N SN+ L+I+N K ++G Y+C+ + ++ ++ V + PSF + L N + C+A G I W N ++ D R T+ L ++I D +TC ATN +GS T +I +I++ K T + V+ V L Y +S L R I+ W D + + + +A SL+ Y+ + Q + V+ P ++++ +TA PP
Sbjct: 346 DISGNYTCVIETPVEDVKVEYNVLVVSAPVIDSQFSKTLKVLKKSPYPSVQCSAHGDPEPRVSWIWSVDDKEVIVNESTLLSLNTSLAIDSTIFTC----QAESVHGLTQRNFTLRAFEPTFVLQNDTTISVNASGKVILKCESAVDPRLESSSSITWL------KDNKPLQ-HFITKDDEVLIPYLHLD-----HGGMYSCLTRTPLESVLVVQKLVVLVETPVIK--LPVNVKRVTEGSDVSITCNASGVPHPSIHWKKDADNIKVSDGEN------LIIRHIG-VEDTGHYSCLAVNEYG-SKQESLSIEVYNKTTVAVDK--ETLISETSDLVVLECPVR---------------LDKRLNIVS---------------ITWYKDGLNE-------------SISNE-------TKLVIRNATKEDQGTYICRVETPVDVVNQTLRLTVLSEGPSFLSTEEDIRTLEGTNVTVNCQANGLPIPKISWTNNGVQI-LKGDDRRTV-------SPLGDLTIHYVSLNDQGNYTCTATNIYGSISTQSTIEVILRSKMATDFKKVKNVIKNVRENVVLDCDVVY--DSRLDR------EIELLWKKDNLPIRINRSKYIAADNSLKV---YNLDISDQGTYECQVNTPFESISSKTALIVSGEPP 914
BLAST of down syndrome cell adhesion molecule isoform x1 vs. L. salmonis genes
Match: EMLSAG00000004040 (supercontig:LSalAtl2s:LSalAtl2s215:590464:702398:-1 gene:EMLSAG00000004040 transcript:EMLSAT00000004040 description:"maker-LSalAtl2s215-snap-gene-7.10") HSP 1 Score: 117.857 bits (294), Expect = 1.686e-26 Identity = 179/803 (22.29%), Postives = 298/803 (37.11%), Query Frame = 0
Query: 525 PPEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEA-------ESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAPYVRKMLPMKVVAGKSMFVTC-PVAGYPISSVTWEKDGRQLPFN---DRQTVYRNGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIGGISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFGSDDTSI--------NLI-------IQEKPETPYGLKVVDKTGRTVKLSWQAPYN-GNSNLTRYVIEF----KPIKGTWANDVDHVLVPGDQTMAGVFSLRPATSYHFRVVAQNDIGVSGPSDTVTIETAEEAPSGPPV--DIRVAAVDQHTLRMGQGPMSDEVLVHTAEGAPTQPPAEVIITTLS--SQAIKVTWSSPPLASANGVIKGYKV-VYGPSKTWYDPSTRNTKVSTDNEAELTSLKKYTNYTVQVLAFTNGGDGVKSEVLTSTTEQDIP-GPPSSVKALAMSEEAILVSWQYP--EEPNGKIIQYTVYI---KELDRSRDIAPKTNKVNALQMSHQVDNLNKKARYEFWVTAHTTIGEG--SPSIKVTLSP 1283
PP +S ++ V+L+C G P PE+ W G + S VL NG + + + GG Y C A + +G V + G P + V+ G++ + C P G P +V W+K+G+ L +R + GTL I + D +Y C+A+N G A + + V P+I T P + A G + ++ C A+G PKP I+W K+ +L + + +I G LIIKN +E Y C A N G +A A I + +PP F +K Q + L C A G + W ++G+ DS L+ C A + G S LI + + P +P + + T ++ ++W P+ G S L Y +++ P+ T +V + L P T+ V A N G+S PS PV ++ A D ++ R G P S + + G ++I +S S+ IK+ W L + ++GY + + G + YD T + + + L+ L+ T Y + +L F N G S + +T++D+P P +K ++ L+ W P + NG + + V I L+ + + P N ++S + Y V A+ G G SP + + ++P
Sbjct: 32 PPLILSHPESTIVPKNDPVTLRCDTSGXPLPEIIWRRNGRKXTTAADDHRSRRVLL------PNGSLFFLRTVHSRKETDGGIYSCVARNTLGSVESLLRDKFRGEP-----VDSDVILGQTAELICXPPKGNPSPTVFWKKNGQILDLETEEERLYIKDEGTLVIPD-SIPGDEGSYQCIAKNIAGTKATQRIHLEVGIVPSI----------------------------------TKAPENASIASGKEIRLVCVAEGKPKPMISWSKSA-GSLPLSRS---------------RIEGGLLIIKNAITTDEDVYRCMAENSAGMDTATAAIRIHSPPIFLVKPSNQKIAVGAPASLDCIAAGNPTPVLFW---------------------MKEGL---------SLSDSGLYXCQARSVSGQSVWSSSLVVSEGGGLIDFKPMPDLSQFPGSPSKPSLANATSHSITVTWSKPHRVGGSPLKGYQLDYYTLASPLHWTTVYNV-------HSEFHTIDDLDPETTLWVLVRALNGYGLSPPS---------------PVSKSLKTLAPDPNS-RTGMDPWS----IRSKLGGRIM----ILIGAISVGSRKIKLEWE---LLISGEFVEGYHIQIRGSKEPHYDSVTISGGGTRSH--TLSDLRPNTKYFIFILPFNNRIKGRPSNLKVVSTKEDVPSSSPDRIKIRLVNVSTGLIQWHTPPSRDLNGDLSGFKVLIFVNSSLESNYTLEPDVNSFLITELSSDFE-----TAYGAKVAAYNRQGVGPFSPMVSININP 701 HSP 2 Score: 90.5077 bits (223), Expect = 4.145e-18 Identity = 93/359 (25.91%), Postives = 139/359 (38.72%), Query Frame = 0
Query: 362 IAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDD----RVKQVGGTLI----IKEAKVDDSGKYLCMVNNSVGGESVETVLTVTAPLSVEVEPKQQVVDYGRSATFKCHY-DGNPVKSVYWLKNGEPVG----------HTETTLRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAP-YVRKMLPMKVVAGKSMFVTCPVAGYPISSVTWEKDGRQLPFNDRQTVYRNGTLAISNVQRKEDASTYTCVARNDEG 700
+ + C G P+P W + N K A DD RV G+L + K D G Y C+ N++G SVE++L EP V G++A C GNP +V+W KNG+ + E TL I D G YQC +N +AT + L P A + + G + L CVA+G P P + W ++S G L + + G ++ I A T Y C A + G+ + +A + ++ P ++ K K+ G + C AG P + W K+G L D+ Y C AR+ G
Sbjct: 50 VTLRCDTSGXPLPEIIWRR----NGRKXTTAADDHRSRRVLLPNGSLFFLRTVHSRKETDGGIYSCVARNTLG--SVESLLRD----KFRGEPVDSDVILGQTAELICXPPKGNPSPTVFWKKNGQILDLETEEERLYIKDEGTLVIPDSIPGDEGSYQCIAKN-IAGTKATQRIHLEVGI-VPSITKAPENASIASGKEIRLVCVAEGKPKPMISW------SKSAGSLPLSRSRIEGGLLI----IKNAITTDEDVYRCMAENSAGMDTATAAIRIHSPPIFLVKPSNQKIAVGAPASLDCIAAGNPTPVLFWMKEGLSL----------------------SDSGLYXCQARSVSG 364 HSP 3 Score: 74.3294 bits (181), Expect = 3.305e-13 Identity = 83/363 (22.87%), Postives = 133/363 (36.64%), Query Frame = 0
Query: 445 EPKQQVVDYGRSATFKCHYDGNPVKSVYWLKNGE----------------PVGHTETTLRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCV-AKGDPAPEVKWF----IYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGL-VSHSAKLNVNGAPYVRKMLP-MKVVAGKSMFVTCPVAGYPISSVTWEKDGRQLPFNDRQTVYRNGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKK 784
P+ +V T +C G P+ + W +NG P G ++S K+ D G+Y C RN S ++ K G E V + D + Q ++ C KG+P+P V W I E E + + + D G +V I + G+Y+C A + G + L V P + K + +GK + + C G P ++W K LP + ++ G L I N D Y C+A N G + + + PP + V+P++++ A G+ A +DC A G P P + W K
Sbjct: 38 HPESTIVPKNDPVTLRCDTSGXPLPEIIWRRNGRKXTTAADDHRSRRVLLPNGSLFFLRTVHSRKETDGGIYSCVARNTLGSVESLLRDKFRG-----EPVDS-DVILGQTAELI---CXPPKGNPSPTVFWKKNGQILDLETEEERL-----YIKDEGTLV----IPDSIPGDEGSYQCIAKNIAGTKATQRIHLEVGIVPSITKAPENASIASGKEIRLVCVAEGKPKPMISWSKSAGSLPLS--RSRIEGGLLIIKNAI-TTDEDVYRCMAENSAGMDT-ATAAIRIHSPPIFL----------------------------------VKPSNQKIAVGAPASLDCIAAGNPTPVLFWMK 344 HSP 4 Score: 70.0922 bits (170), Expect = 6.590e-12 Identity = 44/148 (29.73%), Postives = 63/148 (42.57%), Query Frame = 0
Query: 359 GGNIAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDDRVKQVGGTLIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVTAPLSVEVEPKQQVVDYGRSATFKCHYDGNPVKSVYWLKNGEPVGHTETTLRINSVKKEDRGMYQCFVRN 506
G I + C A+G P P+ W K S L R++ GG LIIK A D Y CM NS G ++ + + +P V+P Q + G A+ C GNP ++W+K G + D G+Y C R+
Sbjct: 235 GKEIRLVCVAEGKPKPMISWSKSAGS-----LPLSRSRIE--GGLLIIKNAITTDEDVYRCMAENSAGMDTATAAIRIHSPPIFLVKPSNQKIAVGAPASLDCIAAGNPTPVLFWMKEG--------------LSLSDSGLYXCQARS 361
BLAST of down syndrome cell adhesion molecule isoform x1 vs. L. salmonis genes
Match: EMLSAG00000003649 (supercontig:LSalAtl2s:LSalAtl2s199:199533:262160:1 gene:EMLSAG00000003649 transcript:EMLSAT00000003649 description:"maker-LSalAtl2s199-augustus-gene-4.24") HSP 1 Score: 98.9821 bits (245), Expect = 4.521e-24 Identity = 43/101 (42.57%), Postives = 57/101 (56.44%), Query Frame = 0
Query: 21 DTNGPVFIQEPPNQMDFSNTTGTEIICQSRGTPMPQITWVKGDGSIVQDVPGLRKVMANGNLVLPPFRAEDYNQEVHAQTYRCIAENTLGKVQSRDVQVRA 121
T GPVFI EPP + FSN TG ++ C + G+P P I+WV G +V + R V+ NG L PPF ED+ +H TY C+A + G+ SR V A
Sbjct: 32 STQGPVFIYEPPRKARFSNDTGGQLTCSAHGSPXPXISWVDSRGQVVTTIAHKRIVLKNGTLYFPPFGVEDFEPSIHRSTYHCVAXXSAGRXLSRKSMVDA 132
BLAST of down syndrome cell adhesion molecule isoform x1 vs. SwissProt
Match: gi|81916020|sp|Q8VHZ8.1|DSCAM_RAT (RecName: Full=Down syndrome cell adhesion molecule homolog; Flags: Precursor) HSP 1 Score: 654.055 bits (1686), Expect = 0.000e+0 Identity = 453/1513 (29.94%), Postives = 706/1513 (46.66%), Query Frame = 0
Query: 222 EIRPGQIH---VVYQPYQQEASNEYVIVGNSALFKCEVPSFVADVVDLVGWIDSEGTSFDRSQHSNYDG-KYVVLPSGELQIRNVSPDDGFKTYKCRTKHRLTGETKLSATAGKLVITEPLASGKPKFSSIVKLSAFQKTQGG-NIAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDDRVKQVGGTLIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVTAPLSVEVEPKQQVVDYGRSATFKCHYDGNPVKSVYWLKNGEPV---------GHTETTLRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAPYVRKMLPMKVVAGKSMFVTCPVAGYPISSVTWEKDGRQLPFNDRQTVYRN-GTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPF-----SFGKDV-------------------------------INEGDFAQVM---------------------CSISRGDEPLLR--PRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNL-QMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIGG-ISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFGSDDTSINLIIQEKPETPYGLKVVDKTGRTVKLSWQAPYNGNSNLTRYVIEFKPIKGTWANDVDHVLVPGDQTMAGVFSLRPATSYHFRVVAQ---------NDIGVSG---------------PSDTVTIETAEEAP--------------------SGPPVDIRVAAVD-----------------------QHTLRMGQGPMSDEVLVHTAEGAPTQPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVYGPSKTWYDPSTRNTKVSTDNEAELTSLKKYTNYTVQVLAFTNGGDGVKSEVLTSTTEQDIPGPPSSVKALAMSEEAILVSWQYPEEPNGKIIQYTVY--------IKELDRSRDIAPKTNKVNALQMSHQVDNLNKKARYEFWVTAHTTIGEGSPSIKVTLSPTNRIPAKIASFDDDFVAMVKQDVKLPCIAVGSPNPQLHWKMRGQPIPK----NDRIRQLPDGSLQITRVLKEDTGKYVCMVNNKYGQDMVTHELVVNGPPDPPEVTITSQTTDTITVKLKTSNPEDK--TPVHGYILHYKPEFGD-WNTAQIPFGSDEFTLDSLLCGQRYHLYVTAHNSIGVGPKSTQLTANTKGVEPTVP-EAHRFLEVSAGSVTLHLNAWMDGGCPILYFVVEYKPRHHQDWTLVSNSVKAGGNFVVLDLNPATWYNLRVTAHNNAGFSVAEYEFATLTVTGGTIAPV 1575
+IR +H V+ +PY ++ + GN A+FKC +PS V V +V W ++ S G ++++ +G L I++V +DG Y+C T+HR TGET+ S +A +L +++P A+ P SI+ +K G + + C A G+P P +RW K +N L L R ++ L+I+ ++ DSG Y+C V+N G V L V PL + P++ G + C GN + + W +NGE + G L ++ + K D G YQCFVR D+ SAQ ++ L P+ +SAF P VSL C KG P P V W + ++ + G+VVSYLNIS ++ + GG Y C A++ G+V + A++NV G +R M + +AG+ ++ C V GYP S+ W K+ LPFN RQ + N GTL +S+VQ++ D YTC S + VTV PP I PF S G+ V I+ DF + ++ + ++R P++ V+P D+ G ++C A+G+P P I WK + + Q +P A N R + +GSL+IK++ + + GYYLCK SN +G +S + V+ P T A + + C A GEKPI + W ++ ++ + RY + + + ++ST+ I T REDS F+C A N++G D I L +QE P+ P +++ D RT+ L W ++GNS +T Y IE K +W + V A + + P+++Y R+ A+ N+I ++ P+ + +I +AP +G + ++D Q R G GP S E++ T E P+ PP V S ++I ++WS+ + NG+++G++V+Y + + +T EL L+KYTNY++QVLAFT GDGV+SE + + T++D+PGPP+ VKA A S + VSW P + NG I +YTV+ I E + S D S+++ NL++ +Y WV A T+ G G+ S +T+ P + PA+I +F +D+ LPC AVG P+P + W P + R +GS I V ED+G Y C+ NN +G D + L V PPD P +T++ T+ +IT+ P D + + GYIL Y + + W + I + L++L CG Y +TA N +G G S + A T G EP E F ++ V L+L W DGGCPI F +EY+P WT + ++++ DL ATWY L++ N+AG + + FATL G TI P+
Sbjct: 110 KIRSQDVHIKAVLREPYTVRVEDQKTMRGNVAVFKCIIPSSVEAYVTVVSW--------EKDTVSLVSGSRFLITSTGALYIKDVQNEDGLYNYRCITRHRYTGETRQSNSA-RLFVSDP-ANSAP---SILDGFDHRKAMAGQRVELPCKALGHPEPDYRWLK-----DNMPL-ELSGRFQKTVTGLLIENSRPSDSGSYVCEVSNRYGTAKVIGRLYVKQPLKATISPRKVKSSVGSQVSLSCSVTGNEDQELSWYRNGEILNPGKNVRITGLNHANLIMDHMVKSDGGAYQCFVRKDKLSAQDYVQVVLED--GTPKIISAFSEKVVSPAEPVSLVCNVKGTPLPTVTWTLDDDPILKGSGHRISQMITSEGNVVSYLNISSSQVRDGGVYRCTANNSAGVVLYQARINVRGPASIRPMKNITAIAGRDTYIHCRVIGYPYYSIKWYKNANLLPFNHRQVAFENNGTLKLSDVQKEVDEGEYTCNVLVQPQLSTSQSVHVTVKVPPFIQPFEFPRFSIGQRVFIPCVVVSGDLPITITWQKDGRPIPASLGVTIDNIDFTSSLRISNLSLMHNGNYTCIARNEAAAVEHQSQLIVRVPPKFVVQPRDQDGIYGKAVILNCSAEGYPVPTIVWKFSKGAGVPQFQPI--------ALNGRIQVLSNGSLLIKHVVEEDSGYYLCKVSNDVGADVSKSMYLTVKIPAMITSYPNTTLATQGQRKEMSCTAHGEKPIIVRWEKEDRIINPEM-ARYLVSTKEVGEEVISTLQILPTVREDSGFFSCHAINSYGEDRGIIQLTVQEPPDPP-EIEIKDVKARTITLRWTMGFDGNSPITGYDIECKNKSDSWDSAQRTKDVSPQLNSATIIDIHPSSTYSIRMYAKNRIGKSEPSNEITITADEAAPDGPPQEVHLEPTSSQSIRVTWKAPKKHLQNGIIRGYQIGYREYSTGGNFQFNIISIDTTGDSEVYTLDNLNKFTQYGLVVQACNRAGTGPSSQEIITTTLEDVPSYPPENVQAIATSPESISISWSTLSKEALNGILQGFRVIYWANLIDGELGEIKNVTTTQPSLELDGLEKYTNYSIQVLAFTRAGDGVRSEQIFTRTKEDVPGPPAGVKAAAASASMVFVSWLPPLKLNGIIRKYTVFCSHPYPTVISEFEASPD-----------SFSYRIPNLSRNRQYSVWVVAVTSAGRGNSSEIITVEPLAKAPARILTFSGTVTTPWMKDIVLPCKAVGDPSPAVKWMKDSNGTPSLVTIDGRRSIFSNGSFVIRTVKAEDSGYYSCVANNNWGSDEIILNLQVQVPPDQPRLTVSKTTSSSITLSWL---PGDNGGSSIRGYILQYSEDNSEQWGSFPISPSERSYRLENLKCGTWYKFTLTAQNGVGPGRISEIIEAKTLGKEPQFSKEQELFASINTTRVRLNLIGWNDGGCPITSFTLEYRPFGTTVWT-TAQRTSLSKSYILYDLQEATWYELQMRVCNSAGCAEKQANFATLNYDGSTIPPL 1576 HSP 2 Score: 109.768 bits (273), Expect = 1.802e-22 Identity = 68/191 (35.60%), Postives = 97/191 (50.79%), Query Frame = 0
Query: 10 WCCGILLFAQSDTNGPVFIQEPPNQMDFSN----------TTGTEIICQSRGTPMPQITWVKGDGSIVQDVPGLRKVMANGNLVLPPFRAEDYNQEVHAQTYRCIAENTLGKVQSRDVQVRAVVHQSYDVYVEMEHVIMGNDVLFKCKIPSYVTDLVQVLDWVESHGNSLKTAPNFVVIQPFETDVGKEYV 190
W + LF QS N VF +EP + + F N T+GT + C + G P + W G + DVPG+R V NG L + PF ++ +H TY C AEN GK++S+DV ++AV+ + Y V VE + + GN +FKC IPS V V V+ W E SL + F++ T G Y+
Sbjct: 2 WILALSLF-QSFAN--VFSEEPHSSLYFVNASLQEVVFASTSGTLVPCPAAGIPPVTLRWYLATGEEIYDVPGIRHVHPNGTLQIFPFPPSSFSTLIHDNTYYCTAENPSGKIRSQDVHIKAVLREPYTVRVEDQKTMRGNVAVFKCIIPSSVEAYVTVVSW-EKDTVSLVSGSRFLI-----TSTGALYI 183 HSP 3 Score: 91.6633 bits (226), Expect = 7.043e-17 Identity = 151/620 (24.35%), Postives = 231/620 (37.26%), Query Frame = 0
Query: 354 FQKTQGGNIAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDDRVKQV--------GGTLII------KEAKVDDSGKYLCMVNNSVG---GESVETVLTVTAPLSVEVEPKQQVVDYGRSATFKCHYDGNP---VKSVYWLKN------GEPVGHTET-TLRINSVKKEDRGMY--QCFVRNDQESAQATGELKLG--GRF---DP----PEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAPYVRKMLPMKVVA--GKSMFVTCPVAGYPISSVTWEKDGRQL-PFNDRQTVYRNGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIGGISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQRE-DSALFTC 931
F T G V CPA G P RWY +A + + V GTL I + + Y C N G + V + P +V VE ++ + G A FKC + V V W K+ G T T L I V+ ED G+Y +C R+ + TGE + R DP P + FD G V L C A G P P+ +W E G Q V+ L I +R G+Y C+ S++ G +L V P + P KV + G + ++C V G ++W ++G L P + + N I + K D Y C R D+ SA+ + V + + + +F + V++ + ++C++ PL WT++ D +GS +I IT + VV+ L + + ++ DG G Y C A+N G + A+I V+ P S K TA+ +T + C G I W N L N R+ + E+ T+ + Q+E D +TC
Sbjct: 36 FASTSG--TLVPCPAAGIPPVTLRWY-----------LATGEEIYDVPGIRHVHPNGTLQIFPFPPSSFSTLIHDNTYYCTAENPSGKIRSQDVHIKAVLREPYTVRVEDQKTM--RGNVAVFKCIIPSSVEAYVTVVSWEKDTVSLVSGSRFLITSTGALYIKDVQNED-GLYNYRCITRH-----RYTGETRQSNSARLFVSDPANSAPSILDGFDHRKAMAGQRVELPCKALGHPEPDYRWLKDNMPLELSGRFQ---------KTVTGLLIENSRPSDSGSYVCEVSNRYGTAKVIGRLYVK-QPLKATISPRKVKSSVGSQVSLSCSVTGNEDQELSWYRNGEILNPGKNVRITGLNHANLIMDHMVKSDGGAYQCFVRKDK-LSAQDYVQVVLEDGTPKIISAFSEKVVSPAEPVSLVCNVK--GTPLPTVTWTLD--DDPILKGSGHRIS--------QMITSEGNVVSYLNISSS---------------QVRDG------------GVYRCTANNSAGVVLYQARINVRGPASIRPMKNI-TAIAGRDTYIHCRVIGYPYYSIKWYKNANLLPFNH------RQVAFENN--GTLKLSDVQKEVDEGEYTC 575
BLAST of down syndrome cell adhesion molecule isoform x1 vs. SwissProt
Match: gi|81917376|sp|Q9ERC8.1|DSCAM_MOUSE (RecName: Full=Down syndrome cell adhesion molecule homolog; Flags: Precursor) HSP 1 Score: 654.055 bits (1686), Expect = 0.000e+0 Identity = 453/1513 (29.94%), Postives = 706/1513 (46.66%), Query Frame = 0
Query: 222 EIRPGQIH---VVYQPYQQEASNEYVIVGNSALFKCEVPSFVADVVDLVGWIDSEGTSFDRSQHSNYDG-KYVVLPSGELQIRNVSPDDGFKTYKCRTKHRLTGETKLSATAGKLVITEPLASGKPKFSSIVKLSAFQKTQGG-NIAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDDRVKQVGGTLIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVTAPLSVEVEPKQQVVDYGRSATFKCHYDGNPVKSVYWLKNGEPV---------GHTETTLRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAPYVRKMLPMKVVAGKSMFVTCPVAGYPISSVTWEKDGRQLPFNDRQTVYRN-GTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPF-----SFGKDV-------------------------------INEGDFAQVM---------------------CSISRGDEPLLR--PRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNL-QMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIGG-ISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFGSDDTSINLIIQEKPETPYGLKVVDKTGRTVKLSWQAPYNGNSNLTRYVIEFKPIKGTWANDVDHVLVPGDQTMAGVFSLRPATSYHFRVVAQ---------NDIGVSG---------------PSDTVTIETAEEAP--------------------SGPPVDIRVAAVD-----------------------QHTLRMGQGPMSDEVLVHTAEGAPTQPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVYGPSKTWYDPSTRNTKVSTDNEAELTSLKKYTNYTVQVLAFTNGGDGVKSEVLTSTTEQDIPGPPSSVKALAMSEEAILVSWQYPEEPNGKIIQYTVY--------IKELDRSRDIAPKTNKVNALQMSHQVDNLNKKARYEFWVTAHTTIGEGSPSIKVTLSPTNRIPAKIASFDDDFVAMVKQDVKLPCIAVGSPNPQLHWKMRGQPIPK----NDRIRQLPDGSLQITRVLKEDTGKYVCMVNNKYGQDMVTHELVVNGPPDPPEVTITSQTTDTITVKLKTSNPEDK--TPVHGYILHYKPEFGD-WNTAQIPFGSDEFTLDSLLCGQRYHLYVTAHNSIGVGPKSTQLTANTKGVEPTVP-EAHRFLEVSAGSVTLHLNAWMDGGCPILYFVVEYKPRHHQDWTLVSNSVKAGGNFVVLDLNPATWYNLRVTAHNNAGFSVAEYEFATLTVTGGTIAPV 1575
+IR +H V+ +PY ++ + GN A+FKC +PS V V +V W ++ S G ++++ +G L I++V +DG Y+C T+HR TGET+ S +A +L +++P A+ P SI+ +K G + + C A G+P P +RW K +N L L R ++ L+I+ ++ DSG Y+C V+N G V L V PL + P++ G + C GN + + W +NGE + G L ++ + K D G YQCFVR D+ SAQ ++ L P+ +SAF P VSL C KG P P V W + ++ + G+VVSYLNIS ++ + GG Y C A++ G+V + A++NV G +R M + +AG+ ++ C V GYP S+ W K+ LPFN RQ + N GTL +S+VQ++ D YTC S + VTV PP I PF S G+ V I+ DF + ++ + ++R P++ V+P D+ G ++C A+G+P P I WK + + Q +P A N R + +GSL+IK++ + + GYYLCK SN +G +S + V+ P T A + + C A GEKPI + W ++ ++ + RY + + + ++ST+ I T REDS F+C A N++G D I L +QE P+ P +++ D RT+ L W ++GNS +T Y IE K +W + V A + + P+++Y R+ A+ N+I ++ P+ + +I +AP +G + ++D Q R G GP S E++ T E P+ PP V S ++I ++WS+ + NG+++G++V+Y + + +T EL L+KYTNY++QVLAFT GDGV+SE + + T++D+PGPP+ VKA A S + VSW P + NG I +YTV+ I E + S D S+++ NL++ +Y WV A T+ G G+ S +T+ P + PA+I +F +D+ LPC AVG P+P + W P + R +GS I V ED+G Y C+ NN +G D + L V PPD P +T++ T+ +IT+ P D + + GYIL Y + + W + I + L++L CG Y +TA N +G G S + A T G EP E F ++ V L+L W DGGCPI F +EY+P WT + ++++ DL ATWY L++ N+AG + + FATL G TI P+
Sbjct: 110 KIRSQDVHIKAVLREPYTVRVEDQKTMRGNVAVFKCIIPSSVEAYVTVVSW--------EKDTVSLVSGSRFLITSTGALYIKDVQNEDGLYNYRCITRHRYTGETRQSNSA-RLFVSDP-ANSAP---SILDGFDHRKAMAGQRVELPCKALGHPEPDYRWLK-----DNMPL-ELSGRFQKTVTGLLIENSRPSDSGSYVCEVSNRYGTAKVIGRLYVKQPLKATISPRKVKSSVGSQVSLSCSVTGNEDQELSWYRNGEILNPGKNVRITGLNHANLIMDHMVKSDGGAYQCFVRKDKLSAQDYVQVVLED--GTPKIISAFSEKVVSPAEPVSLVCNVKGTPLPTVTWTLDDDPILKGSGHRISQMITSEGNVVSYLNISSSQVRDGGVYRCTANNSAGVVLYQARINVRGPASIRPMKNITAIAGRDTYIHCRVIGYPYYSIKWYKNANLLPFNHRQVAFENNGTLKLSDVQKEVDEGEYTCNVLVQPQLSTSQSVHVTVKVPPFIQPFEFPRFSIGQRVFIPCVVVSGDLPITITWQKDGRPIPASLGVTIDNIDFTSSLRISNLSLMHNGNYTCIARNEAAAVEHQSQLIVRVPPKFVVQPRDQDGIYGKAVILNCSAEGYPVPTIVWKFSKGAGVPQFQPI--------ALNGRIQVLSNGSLLIKHVVEEDSGYYLCKVSNDVGADVSKSMYLTVKIPAMITSYPNTTLATQGQRKEMSCTAHGEKPIIVRWEKEDRIINPEM-ARYLVSTKEVGEEVISTLQILPTVREDSGFFSCHAINSYGEDRGIIQLTVQEPPDPP-EIEIKDVKARTITLRWTMGFDGNSPITGYDIECKNKSDSWDSAQRTKDVSPQLNSATIIDIHPSSTYSIRMYAKNRIGKSEPSNEITITADEAAPDGPPQEVHLEPTSSQSIRVTWKAPKKHLQNGIIRGYQIGYREYSTGGNFQFNIISIDTTGDSEVYTLDNLNKFTQYGLVVQACNRAGTGPSSQEIITTTLEDVPSYPPENVQAIATSPESISISWSTLSKEALNGILQGFRVIYWANLIDGELGEIKNVTTTQPSLELDGLEKYTNYSIQVLAFTRAGDGVRSEQIFTRTKEDVPGPPAGVKAAAASASMVFVSWLPPLKLNGIIRKYTVFCSHPYPTVISEFEASPD-----------SFSYRIPNLSRNRQYSVWVVAVTSAGRGNSSEIITVEPLAKAPARILTFSGTVTTPWMKDIVLPCKAVGDPSPAVKWMKDSNGTPSLVTIDGRRSIFSNGSFIIRTVKAEDSGYYSCVANNNWGSDEIILNLQVQVPPDQPRLTVSKTTSSSITLSWL---PGDNGGSSIRGYILQYSEDNSEQWGSFPISPSERSYRLENLKCGTWYKFTLTAQNGVGPGRISEIIEAKTLGKEPQFSKEQELFASINTTRVRLNLIGWNDGGCPITSFTLEYRPFGTTVWT-TAQRTSLSKSYILYDLQEATWYELQMRVCNSAGCAEKQANFATLNYDGSTIPPL 1576 HSP 2 Score: 109.768 bits (273), Expect = 1.802e-22 Identity = 68/191 (35.60%), Postives = 97/191 (50.79%), Query Frame = 0
Query: 10 WCCGILLFAQSDTNGPVFIQEPPNQMDFSN----------TTGTEIICQSRGTPMPQITWVKGDGSIVQDVPGLRKVMANGNLVLPPFRAEDYNQEVHAQTYRCIAENTLGKVQSRDVQVRAVVHQSYDVYVEMEHVIMGNDVLFKCKIPSYVTDLVQVLDWVESHGNSLKTAPNFVVIQPFETDVGKEYV 190
W + LF QS N VF +EP + + F N T+GT + C + G P + W G + DVPG+R V NG L + PF ++ +H TY C AEN GK++S+DV ++AV+ + Y V VE + + GN +FKC IPS V V V+ W E SL + F++ T G Y+
Sbjct: 2 WILALSLF-QSFAN--VFSEEPHSSLYFVNASLQEVVFASTSGTLVPCPAAGIPPVTLRWYLATGEEIYDVPGIRHVHPNGTLQIFPFPPSSFSTLIHDNTYYCTAENPSGKIRSQDVHIKAVLREPYTVRVEDQKTMRGNVAVFKCIIPSSVEAYVTVVSW-EKDTVSLVSGSRFLI-----TSTGALYI 183 HSP 3 Score: 91.6633 bits (226), Expect = 6.810e-17 Identity = 151/620 (24.35%), Postives = 231/620 (37.26%), Query Frame = 0
Query: 354 FQKTQGGNIAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDDRVKQV--------GGTLII------KEAKVDDSGKYLCMVNNSVG---GESVETVLTVTAPLSVEVEPKQQVVDYGRSATFKCHYDGNP---VKSVYWLKN------GEPVGHTET-TLRINSVKKEDRGMY--QCFVRNDQESAQATGELKLG--GRF---DP----PEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAPYVRKMLPMKVVA--GKSMFVTCPVAGYPISSVTWEKDGRQL-PFNDRQTVYRNGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIGGISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQRE-DSALFTC 931
F T G V CPA G P RWY +A + + V GTL I + + Y C N G + V + P +V VE ++ + G A FKC + V V W K+ G T T L I V+ ED G+Y +C R+ + TGE + R DP P + FD G V L C A G P P+ +W E G Q V+ L I +R G+Y C+ S++ G +L V P + P KV + G + ++C V G ++W ++G L P + + N I + K D Y C R D+ SA+ + V + + + +F + V++ + ++C++ PL WT++ D +GS +I IT + VV+ L + + ++ DG G Y C A+N G + A+I V+ P S K TA+ +T + C G I W N L N R+ + E+ T+ + Q+E D +TC
Sbjct: 36 FASTSG--TLVPCPAAGIPPVTLRWY-----------LATGEEIYDVPGIRHVHPNGTLQIFPFPPSSFSTLIHDNTYYCTAENPSGKIRSQDVHIKAVLREPYTVRVEDQKTM--RGNVAVFKCIIPSSVEAYVTVVSWEKDTVSLVSGSRFLITSTGALYIKDVQNED-GLYNYRCITRH-----RYTGETRQSNSARLFVSDPANSAPSILDGFDHRKAMAGQRVELPCKALGHPEPDYRWLKDNMPLELSGRFQ---------KTVTGLLIENSRPSDSGSYVCEVSNRYGTAKVIGRLYVK-QPLKATISPRKVKSSVGSQVSLSCSVTGNEDQELSWYRNGEILNPGKNVRITGLNHANLIMDHMVKSDGGAYQCFVRKDK-LSAQDYVQVVLEDGTPKIISAFSEKVVSPAEPVSLVCNVK--GTPLPTVTWTLD--DDPILKGSGHRIS--------QMITSEGNVVSYLNISSS---------------QVRDG------------GVYRCTANNSAGVVLYQARINVRGPASIRPMKNI-TAIAGRDTYIHCRVIGYPYYSIKWYKNANLLPFNH------RQVAFENN--GTLKLSDVQKEVDEGEYTC 575
BLAST of down syndrome cell adhesion molecule isoform x1 vs. SwissProt
Match: gi|238064982|sp|Q9VS29.3|DSCL_DROME (RecName: Full=Down syndrome cell adhesion molecule-like protein Dscam2; Flags: Precursor) HSP 1 Score: 410.223 bits (1053), Expect = 1.518e-114 Identity = 353/1327 (26.60%), Postives = 579/1327 (43.63%), Query Frame = 0
Query: 359 GGNIAVTCPAQGYPIPVFRWY--KFMESNNNKKLVALDDRVKQVGGTLI----IKEAKVDDSGKYLCMVNNSVGGESVETVLTVTAPLSVEVEPKQQVVDYGRSATFKCHYDGNPVKSVYWLKNGEPVG-------HTETTLRINSVKK-EDRGMYQCFVRNDQ-ESAQATGELKLGGRFDPPEFVS-AFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAP-YVRKMLPMKVVAGKSMFVTCPVAGYPISSVTWEK----------DGRQLPFNDRQTVYRNGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIGGISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGML----STISIKRTQREDSAL----------FTCVATNAFGSDDTSINLIIQEKPETPYG----LKVVDKTGRTVKLSWQAPYN--GNSNLTRYVIEFKPIKGTWANDVDHVLVPGDQTMAGVFSLRPATSYHFRVVAQNDIGVSGPSDTVTIETAEEAPSGPPVDIRVAAVDQHTLRMGQGPMSDEVLVHTAEGAPTQPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVYGPSKTWYDPSTRN--TKVSTDNEAELTSLKKYTNYTVQVLAFTNGGDGVKSEVLTSTTEQDIPGPPSSVKALAMSEEAILVSWQYPEEPNGKIIQYTVYIKELDRSRDIAPKTNKVNALQMSHQVDNLNKKARYEFWVTAHTTIGEGSPSIKVTLSPTNRIPAKIASFDDDFVAMVKQDVKLPCIAVGSPNPQLHWKMRGQPIPKNDRIRQ--------LPDGSLQITRVLKEDTGKYVCMVNNKYGQDMVTHELVVNGPPDPPEVTITSQTTDTITVKLKTSNPEDKTPVHGYILHYKPEFGDWNTAQIPFGSDEFTLDSLLCGQRYHLYVTAHNSIGVGPKSTQLTANTKGVEPTVPEAHRFLEVSAGSVTLHLNAWMDGGCPILYFVVEYKPRHHQ---DWTLVSNSVKAGGNFVVLDLNPATWYNLRVTAHNNAGFSVAEYEFATLTVTGGTIAPVREIDGSGSSAGDGRNPFEESLMYFLTNVNLVVPVVAAIAVIVVAIAVICV 1625
G +++ C A G P P W F +N + ++ + V G +I I V+D G+Y C+ N G L + + + PK V G + KC G P++ ++W + G + + +L I+ V+K D G+Y C+ RN Q SA+ +GE+ + PP AF + ++ V++GDP ++ W G +G+ + S L+I + G Y C A + + ++A L V P ++ + + V + + + C G P S+ W+K + R+ PF + NG+L + +V+ + Y C A N G + + V P S ++ +GD A + C++S GD+P+ I W ++ N L P+ + + L I+ + + G Y C+ASN G + ++ VQ PP +VL+ + + I W K L T +Y + E + D + I +K ++ + F +A + G S LI++ +P+ P G L + + +SW AP + ++ Y + +K S T+Y+F V+ + G +G E SG R V Q ++G GP+S+ T E P++PP +V LSSQ+++V+W PP+ NG+++GYK+++ P PS ++ +T LT L+KYTNY++QVLA T GDGV S+ L +E+D+P P+ +K ++ S +++ +SW P EPNG I +Y++Y + ++ ++ + + + Q ++ L+ Y+FWVTA T +GEG S + TNRIPA+I SF V + V LPC AVG P+ W + +RQ L G L I+ + D G Y C V+N G D +TH L+V PP P + +TS T+ +I + K P+ GY L Y+ G+ + Q+ + L L+CG Y ++++A N +G P ST L T+G P P + L ++ S+ + L++W D GCP+LYFV++Y+ +W LVSN++K V+ +L P+T Y LR+ AHN AG S AE+ F TLT G P EI G S N+NL++P +AA++ + I +I V
Sbjct: 437 GPAVSLKCSAAGNPTPQISWTLDGFPLPSNGRFMIG---QYITVHGDVISHVNISHVMVEDGGEYACIAENRAGRVQHAARLNIYGLPYIRLIPKVTAVS-GETLNLKCPVAGYPIEEIHWERGGRELPDDIRQRVQPDGSLTISPVQKNSDSGVYTCWARNKQGHSARRSGEVTV---IVPPSIEPFAFQEGLAEGMRTRTVCGVSRGDPPLKLIWLKDGDPLPD----LLGANVTMLDQYSSLLSIPSLSATHSGEYTCVAKNPAAEIKYTALLQVKVPPRWIVEPVDANVERNRHIMLHCQAQGVPTPSIVWKKATGSKSGEYEEVRERPFTK---LLGNGSLLLQHVKEDREG-FYLCQANNGIGTGIGKVIQLKVNSSPYFSSTSRSV-MVKKGDTALLQCAVS-GDKPI--------------------------------NIVWMRSGKNTLN----PSTNYKISVKQEATPDGVSAELQIRTVDATDSGPYFCRASNLYGNDQQLVQLQVQEPPL-------------PPSVLEAAMISSRSVNIKWQ--PKTLGTGDVTKYIV-EFREADPLFVDQWQQIEVKDPPHFNAMIENLKPATRYAFRVIAEGSAGRSAPSQELIVRTEPQRPAGPPLSLSARPLSSTELLISWVAPLPELRHGDIQGYNVGYK------------------------LSSSGNTAYNFTSVSGDGDGGNG----------ELLLSGLAKFARYTVVVQAFNQVGPGPLSEPTAAQTMEDVPSRPPEDVRCAALSSQSLQVSWQPPPIYHTNGLLQGYKLIFEPIIDDIQPSKDEVESRKTTALTMVLTGLRKYTNYSIQVLAHTRMGDGVVSKPLFCHSEEDVPEAPADIKVVSSSSQSLYISWLPPNEPNGVITKYSLYTRVVNGREELNNEKRSLPSQQAYYEAKGLHPHMEYQFWVTASTRVGEGKSSRVSSQITTNRIPARIISFGGPVVRPWRSTVTLPCTAVG--KPKREW------FKSDVALRQGGLHNSQLLDSGDLIISSLQLADGGNYSCQVDNGIGTDRLTHTLIVQVPPTAPVLYVTSATSSSILMHWKCGF-TGNAPITGYTLFYRRANGNTDEMQLSRHASSHELKGLMCGSTYQIHLSAQNKVGTSPTSTILHVRTQGQSPGHPASTALLAPNSTSLLVRLHSWPDNGCPLLYFVLQYRAVTDDPDAEWVLVSNALKPQRRIVINNLQPSTLYQLRMEAHNVAGISQAEFNFVTLTKDGDPPPP--EIMHRGRSG---------QTTVIFANINLLIPTIAAVSGMFCTIIMIIV 1640 HSP 2 Score: 403.675 bits (1036), Expect = 1.522e-112 Identity = 364/1299 (28.02%), Postives = 581/1299 (44.73%), Query Frame = 0
Query: 230 VVYQPYQQEASNEYVIVGNSALFKCEVPSFVADVVDLVGWIDSEGTSFDRSQHSNYDGKYVVLPSGELQIRNVSPDDGFKTYKCRTKHRLTGETKLSATAGKLVITEPLASGKPKFSSIVKLSA-FQKTQGGNIAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDD-RVKQVGGTLIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVTAPLSVEVEPKQQVVDYGRSATFKCHY--DGNPV--KSVYWLKNGEPV---GHTETTLRINSVKKEDRGMYQCFVRNDQ-ESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAPYVRKMLPMKVVAGKSMFVTCPVAGYPISSVTWEKDGRQLPFNDRQTVYRNGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIGGISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGML--STISIKRTQREDSALFTCVATNAFGSDDTSINLIIQEKP-ETPYGLKVVDKTGRTVKLSWQAPYNGNSNLTRYVIEF-KPIKGTWANDVDHVLVPGDQTMAGVFSLRPATSYHFRVVAQNDIGVSGPSDTVTIETAEEAPSGPPVDIRVAAVDQHTLRMGQGPMSDEVLVHTAEGAPTQPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVYGPSKTWYDPSTRNTKVST--DNEAELTSLKKYTNYTVQVLAFTNGGDGVKSEVLTSTTEQDIP-GPPSSVKALAMSEEAILVSW--QYPEEPNGKIIQYTVYIKELDRSRDIAPKTNKVNA--------LQMSHQVDNLNKKARYEFWVTAHTTIGEGSPSIKVTLSPTNRIPAKIASFDDDFVAMVKQDVKLPCIAVGSPNPQLHW---------------KMRGQPI-----PKNDRI--RQLPDGSLQITRVLKEDTGKYVCMVNNKYGQDMVTHELVVNGPPDPPE----VTITSQTTDTITVKLKTSNPED----KTPVHGYILHYKPEFGDWNTAQIPFGSDEFTLDSLLCGQRYHLYVTAHNSIGVGPK---STQLTAN 1468
VV Q Y+ + G +A+ +C VP+FV ++V +V W+ S DGK+ +LP+GEL I N+ D ++++CR+ HRLT + +S+ +L I P S+V+ +A Q +Q + C AQG P P + W+ N L L RV+ +G L I+ +DSG Y C N G S E LTV P+ VE+ P V G +A F+C +G+PV +++ W K+G + G E TL + V +E+RGMYQC VR + ++ QAT EL+LG PP + +F T QPGP VSLKC A G+P P++ W + G S+G +G + + +GDV+S++NIS + GG Y C A ++ G V H+A+LN+ G PY+R + + V+G+++ + CPVAGYPI + WE+ GR+LP + RQ V +G+L IS VQ+ D+ YTC ARN +G+SAR VTV+ PP+I PF+F ++ + EG + +C +SRGD PL K+ DG P P D +N + L I ++ + G Y C A N I A + V+ PP + ++ + + +L C+A+G I+W K+ + Y E +L ++ ++ + + + C A N G T I +IQ K +PY T R+V + G++ L + + KPI W +G +L P+T+Y ++ + + G S + I T + SGP + R +D+ LV P PP+ + +SS+++ + W P G + Y V + + + + +V A + +LK T Y +V+A + G S+ L TE P GPP S+ A +S +L+SW PE +G I Y V K L S + A V+ L +S L K ARY V A +G G S PT A +D + +DV+ C A+ S + Q+ W K+ +PI P D + R+ ++ +T + K + + + G +V+ L + D PE + + S ++ ++ + N + K ++ +++ + E + +P + L Y +VTA +G G S+Q+T N
Sbjct: 128 VVAQAYKVDVEVLSAARGCTAILRCVVPTFVKELVRVVSWVHEPAIYIYPSLQG--DGKFHLLPTGELLIHNLQESDESQSFRCRSMHRLTRQVVVSSPT-RLRINSHRGIISP---SVVEHTAHVQVSQDEGAVLLCVAQGCPSPEYSWFTH---NGAGPLPVLSGPRVRLLGPILAIEAVTGEDSGVYKCTAGNVGGEASAELRLTVATPIQVEISPNVLSVHMGGTAEFRCLVTSNGSPVGMQNILWYKDGRQLPSSGRVEDTLVVPRVSRENRGMYQCVVRRPEGDTFQATAELQLGD--APPVLLYSFIEQTLQPGPAVSLKCSAAGNPTPQISWTLDGFPLPSNGRFMIGQYITVHGDVISHVNISHVMVEDGGEYACIAENRAGRVQHAARLNIYGLPYIRLIPKVTAVSGETLNLKCPVAGYPIEEIHWERGGRELPDDIRQRVQPDGSLTISPVQKNSDSGVYTCWARNKQGHSARRSGEVTVIVPPSIEPFAF-QEGLAEGMRTRTVCGVSRGDPPL--------------------KLIWLKDGDPLP----------------------DLLGANVTMLDQYSSLLSIPSLSATHSGEYTCVAKNPAAEIKYTALLQVKVPPRWIVEPVDANVERNRHIMLHCQAQGVPTPSIVW----KKATGSKSGEYEEVRERPFTKLLGNGSLLLQHVKEDREGFYLCQANNGIG---TGIGKVIQLKVNSSPY----FSSTSRSVMVK-----KGDTALLQCAVSGDKPINIVWMR-------------SGKNTLNPSTNY--KISVKQEATPDGVSAELQIRTVDATDSGP-----------YFCRASNLYGNDQQLVQLQVQEPPLPPSVLEAAMISSRSVNIKWQ--PKTLGTGDVTKYIVEFREADPLFVDQWQQIEVKDPPHFNAMIENLKPATRYAFRVIAEGSAGRSAPSQELIVRTEPQRPAGPPLSLSARPLSSTELLISWVAPLPELRHGDIQGYNVGYK-LSSSGNTAYNFTSVSGDGDGGNGELLLS----GLAKFARYTVVVQAFNQVGPGPLS-----EPT------AAQTMEDVPSRPPEDVR--CAALSSQSLQVSWQPPPIYHTNGLLQGYKLIFEPIIDDIQPSKDEVESRKTTALTMVLTGLRKYTNYSIQVLAHTRMGDGVVSKPLFCHSEEDVPEAPADIKVVSSSSQSLYISWLPPNEPNGVITKYSLYTRVVNGREELNN-EKRSLPSQQAYYEAKGLHPHMEYQFWVTASTRVGEGKSSRVSSQITTN 1309 HSP 3 Score: 387.882 bits (995), Expect = 1.378e-107 Identity = 352/1313 (26.81%), Postives = 567/1313 (43.18%), Query Frame = 0
Query: 19 QSDTNGPVFIQEPPNQMDFSNTTGTEIICQSRGTPMPQITWVKGDGSIVQDVPGLRKVMANGNLVLPPFRAEDYNQEVHAQTYRCIAENTLGKVQSRDVQVRAVVHQSYDVYVEMEHVIMGNDVLFKCKIPSYVTDLVQVLDWVESHGNSLKTAPNFVVIQPFETDVGKEYVILGNDALMKCSIPSFVADQLEVVSWHGSDGSEIRPGQIHVVYQPYQQEASNEYVIVGNSALFKCEVPSFVADVVDLVGWIDSEGTSFDRSQHSN--------YDGKYVVLPSGELQIRNVSPDDGFKTYKCRTKHRLTGETKLSATAGKLVITEPLASGKPKFSSIVKLS--AFQKTQGGNIAVTC--PAQGYPIPV--FRWYKFMESNNNKKLVALDDRVKQVGGTLIIKEAKVDDSGKYLCMVNNSVGG--ESVETVLTVTAPLSVEVEPKQQVVDYGRSATFKCHYDGNPVKSVYWLKNGEPV---------------GHTETTLRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQA-RTKYGGTYECQASSKVGLVSHSAK----LNVNGAPYVRKMLPMKVVA-GKSMFVTCPVA-GYPISSVTWEKDGRQLP---FNDRQTVYRNGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKII--DGSLIIKNIKKGNEGYYLCKASNGIG-GISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKR-LDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFGSDDTSINLIIQEKPETPYGLKVVDKTGRTVKLSWQAPYNGNSNLTRYVIEFKPIKGTWANDVDHVLVPGDQTM-AGVFSLRPATSYHFRVVAQNDIGVSGPSDTVTIETAEEAPSGPPVDIRVAAVDQHTLRMGQGPMSDEVLVHTAEGAPTQPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVYGPSKTWYDPSTRNTKVSTD-----NEAELTSLKKYTNYTVQVLAFTNGGDGVKSEVLTSTTEQDIPG-PPSSVKALAMSEEAILVSWQYPE--EPNGKIIQYTV----YIKELDRSRDIAPKTNKVNALQMSHQVDNLNKKARYEFWVTAHTTIGEG 1273
++ GP F+ EPP +++FSN++G + C + G+P P + WV DGS V ++ G+R+V+ NG LVL PF A Y+Q+VH YRCIA N++G++ SRDVQVRAVV Q+Y V VE+ G + +C +P++V +LV+V+ WV P + + D GK +++ + L+ S + S H R + VV P + ++ I+ S + D ++ + S + S ++ G V L L I V+ +D YKC T + GE ++ +L + P+ V++S GG C + G P+ + WYK + + + RV+ TL++ ++ G Y C+V G ++ + AP + +Q + G + + KC GNP + W +G P+ G + + I+ V ED G Y C N Q L + G ++ VT G ++LKC G P E+ W G E D +V S L IS + G Y C A +K G HSA+ + V P + + +A G C V+ G P + W KDG LP + + + +L + YTCVA+N P A + ++ QV + PRW VEP D + + C+A G P P I WKKA T + +++ +R + +GSL+++++K+ EG+YLC+A+NGIG GI V ++ V + P F R+ + +LQC G+KPI I+W + K L+ + + + ++++E+ DG+ + + I+ DS + C A+N +G+D + L +QE P P L+ + R+V + WQ G ++T+Y++EF+ + + + V A + +L+PAT Y FRV+A+ G S PS + + T + P+GPP+ + LSS + ++W +P +G I+GY V Y S + + + T VS D E L+ L K+ YTV V AF G G SE + T +D+P PP V+ A+S +++ VSWQ P NG + Y + I ++ S+D ++ K AL M + L K Y V AHT +G+G
Sbjct: 25 EAHLRGPGFVMEPPGRVEFSNSSGGWLDCSASGSPQPTVDWVHADGSAVTEIHGVRRVLRNGTLVLMPFAAAAYHQDVHNTIYRCIASNSVGRIVSRDVQVRAVVAQAYKVDVEVLSAARGCTAILRCVVPTFVKELVRVVSWVHE--------PAIYIYPSLQGD-GKFHLLPTGELLIHNLQESDESQSFRCRSMH-------RLTRQVVVSSPTRLRINSHRGIISPSVVEHTAHVQVSQDEGAVLLCVAQGCPSPEYSWFTHNGAGPLPVLSGPRVRLLGPILAIEAVTGEDS-GVYKC-TAGNVGGE---ASAELRLTVATPIQ---------VEISPNVLSVHMGGTAEFRCLVTSNGSPVGMQNILWYK------DGRQLPSSGRVED---TLVVPRVSRENRGMYQCVVRRPEGDTFQATAELQLGDAPPVLLYSFIEQTLQPGPAVSLKCSAAGNPTPQISWTLDGFPLPSNGRFMIGQYITVHGDVISHVNISHVMVEDGGEYACIAENRAGRVQHAARLNIYGL----PYIRLIPKVTAVSGETLNLKCPVAGYPIEEIHWERGGRELPDDIRQRVQPDGS--------LTISPVQKNSDSGVYTCWARNKQG---HSARRSGEVTVIVPPSIEPFAFQEGLAEGMRTRTVCGVSRGDPPLKLIWLKDGDPLPDLLGANVTMLDQYSSLLSIPSLSATHSGEYTCVAKN----------------PAAEIKYT---------ALLQVK----------VPPRWIVEPVDANVERNRHIMLHCQAQGVPTPSIVWKKA---------TGSKSGEYEEVRERPFTKLLGNGSLLLQHVKEDREGFYLCQANNGIGTGIGKVIQLKVNSSPYFSSTSRSVMVKKGDTALLQCAVSGDKPINIVWMRSGKNTLNPSTNYKISVKQEATPDGVSAELQIRTVDATDSGPYFCRASNLYGNDQQLVQLQVQEPPLPPSVLEAAMISSRSVNIKWQPKTLGTGDVTKYIVEFREADPLFVDQWQQIEVKDPPHFNAMIENLKPATRYAFRVIAEGSAGRSAPSQELIVRTEPQRPAGPPLSLSARP-------------------------------------LSSTELLISWVAPLPELRHGDIQGYNVGYKLSSSG-NTAYNFTSVSGDGDGGNGELLLSGLAKFARYTVVVQAFNQVGPGPLSEPTAAQTMEDVPSRPPEDVRCAALSSQSLQVSWQPPPIYHTNGLLQGYKLIFEPIIDDIQPSKDEV-ESRKTTALTMV--LTGLRKYTNYSIQVLAHTRMGDG 1198
BLAST of down syndrome cell adhesion molecule isoform x1 vs. SwissProt
Match: gi|939319698|sp|F1NY98.3|DSCAM_CHICK (RecName: Full=Down syndrome cell adhesion molecule homolog; Flags: Precursor) HSP 1 Score: 403.29 bits (1035), Expect = 2.019e-112 Identity = 351/1319 (26.61%), Postives = 564/1319 (42.76%), Query Frame = 0
Query: 311 YKCRTKHRLTGETKLSATAGKLVITEPLASGKPKFSSIVKLSAFQK---TQGGNIAVTCPAQGYPIPVFRWYKFME---SNNNKKLVALDDRVKQVGGTLIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVTAPLSVEVEPKQQVVDY-GRSATFKCHYDGNPVKSVYWLKNGE--PVGHTET------TLRINSVKKE-DRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCVA-KGDPAPEVKWFIYGSEAESDGVLQVGSF--NSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAP-YVRKMLPMKVVAGKSMFVTCPVAGYPISSVTWE-KDGRQLP------FNDRQTVYRNGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIGGISAVAKIAVQAPP---SFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFGSDDTSINLIIQEKPETPYG----LKVVDKTGRTVKLSWQAP--YNGNSNLTRYVIEFKPIK--GTWANDVDHVLVPGDQTMAGVFSLRPATSYHFRVVAQNDIGVSGPSDTVTIETAEEAPSGPPVDIRVAAVDQHTLRMGQGPMSDEVLVHTAEGAPTQPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVYGPSKTWYDPSTRNTKVSTDNEAELTSLKKYTNYTVQVLAFTNGGDGVKSEVLTSTTEQDIPGPPSSVKALAMSEEAILVSWQYPEEPNGKIIQYTVY--------IKELDRSRDIAPKTNKVNALQMSHQVDNLNKKARYEFWVTAHTTIGEGSPSIKVTLSPTNRIPAKIASFDDDFVAMVKQDVKLPCIAVGSPNPQLHWKMRGQPIPK----NDRIRQLPDGSLQITRVLKEDTGKYVCMVNNKYGQDMVTHELVVNGPPDPPEVTITSQTTDTITVKLKTSNPEDK--TPVHGYILHYKPEFGD-WNTAQIPFGSDEFTLDSLLCGQRYHLYVTAHNSIGVGPKSTQLTANTKGVEPTVP-EAHRFLEVSAGSVTLHLNAWMDGGCPILYFVVEYKPRHHQDWTLVSNSVKAGGNFVVLDLNPATWYNLRVTAHNNAGFSVAEYEFATLTVTGGTIAPV 1575
Y+C + + K+SA VI E G PK +SAF + + G +++ C +G P+P W + + + ++ + V L I +V D G Y C NNS G + + V P S+ P + + GR C G P S+ W KN P H + TL+++ V+KE D G Y C N Q + + P F+ F+ G V + CV GD + W + DG S DN D S L IS + G Y C A + V H ++L V P +V + + GK++ + C GYP+ ++ W+ G +P N R + NG+L I +V +ED+ Y C ND G + +TV P I + + +G ++ C+ + G++P++ RW E D I+ + + V++ LQ+ PT + + G++ C A N G + ++ VQ PP EI++ ++ T+ G PI +++ K + D ++ S + + I + + + ++ A N G + S L I P G +++ + ++++++W+AP + N + Y I ++ G + ++ + GD + + +L+ T Y V A N R G GP S E++ T E P+ PP V T S + I ++WS+ + NG+++G++V+Y + + +T EL L+KYTNY++QVLAFT GDGV+SE + + T++D+PGPP+ VKA A S + VSW P + NG I +YTV+ I E + S D S+++ NL++ +Y WV A T G G+ S +T+ P + PA+I +F +D+ LPC AVG P P + W P + R +GS I V ED+G Y C+ +N +G D + L V PPD P +T++ T+ +IT+ P D + + GYIL Y + + W + I + L++L CG Y +TA N +G G S + A T G EP E F ++ V L+L W DGGCPI F +EY+P WT + ++++ DL ATWY L++ N+AG + + +FATL G TI P+
Sbjct: 409 YQCFVR-----KDKMSAQDYVQVILE---DGTPKI-----ISAFSEKVVSPGEPVSLMCNVKGTPLPTITWTLDEDPIVKDGSHRISQIITSEGNVVSYLNISNTQVRDGGVYRCTANNSAGVVLYQARINVRGPASIR--PMKNITAIAGRDTYIHCRVIGYPYYSIKWYKNSNLLPFNHRQVAFENNGTLKLSDVQKEVDEGEYTC---NVLVQPQLSTSQSVHVTVKVPPFIQPFEFPRFSIGQRVFIPCVVVSGDLPITITW-------QKDGRPIPASLGVTIDNIDFTSSLRISNLSLMHNGNYTCIARNDAAAVEHQSQLIVRVPPRFVVQPSDQDGIYGKAVILNCSAEGYPVPTIVWKYSKGAGVPQFQPIALNGRIQLLTNGSLLIKHVL-EEDSGYYLCKVSNDVGADVSKSMYLTVKIPAMITSYP-NTTLATQGQKKEMSCT-AHGEKPIIV-RWEKE----------DRIINPEMSRYLVSTKEVGDEVISTLQILPTVRE---------------------------DSGFFSCHAINSYGEDRGIIQLTVQEPPDPPEIEIREVRARSIALRWTM---GFDGNSPI-TGYDIECKNKSDSWDSVQRTKDVSPQLNQATIIDLHPSSTYNIRMY---AKNRIGKSEASNELTITTDEAAPDGPPQDVQLEPISSQSIRVTWKAPKKHLQNGIIRGYQIGYREYSAGGNFQFNIISIDTTGDSEVYTLNNLKKFTQYGMVVQACN-------------------------------------RAGIGPSSQEIITTTLEDVPSCPPGNVQATATSPETISISWSTLAKETLNGILQGFRVIYWANLLDGELGEIRNVTTTQPSLELDGLEKYTNYSIQVLAFTRAGDGVRSEQIFTRTKEDVPGPPAGVKAAASSASTVFVSWLPPLKLNGIIRKYTVFCSHPYPTVISEFEASPD-----------SFSYRIPNLSRNRQYSVWVVAVTAAGRGNSSEIITVEPLAKAPARILTFSGTVTTPWMKDIVLPCKAVGDPAPTVKWMKDSNGTPSLVMIDGRRSIFSNGSFVIRTVKAEDSGYYSCVASNNWGSDEIILNLQVQVPPDQPRLTVSKTTSSSITLSWI---PGDNGGSSIRGYILQYSEDNSEQWGSFPISPSERSYRLETLKCGTWYKFTLTAQNGVGPGRISEIIEAKTLGKEPQFSKEQELFASINTTRVRLNLIGWNDGGCPITSFTLEYRPFGTTVWT-TAQRTSLSKSYILYDLQEATWYELQMRVCNSAGCAEKQAKFATLNYDGSTIPPL 1602 HSP 2 Score: 374.4 bits (960), Expect = 2.186e-103 Identity = 318/1153 (27.58%), Postives = 496/1153 (43.02%), Query Frame = 0
Query: 222 EIRPGQIH---VVYQPYQQEASNEYVIVGNSALFKCEVPSFVADVVDLVGWIDSEGTSFDRSQHSNYDG-KYVVLPSGELQIRNVSPDDGFKTYKCRTKHRLTGETKLSATAGKLVITEPLASGKPKFSSIVKLSAFQKTQGG-NIAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDDRVKQVGGTLIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVTAPLSVEVEPKQQVVDYGRSATFKCHYDGNPVKSVYWLKNGEPV---------GHTETTLRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAPYVRKMLPMKVVAGKSMFVTCPVAGYPISSVTWEKDGRQLPFNDRQTVYR-NGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIID--GSLIIKNIKKGNEGYYLCKASNGIGGISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDP-RYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFGSDDTSINLIIQEKPE--TPYGLKVVDKTGRTVKLSWQAPYNG-------------NSNLTRYVIEFKPIKGTWANDVDHVLVPGDQTMAGVFSLRPATSY--------------------HFRVVAQNDIGV--------SGPSDTVTIETAEEAPSGPPV----DI-----RVAAVDQH-----TLRM------GQGPMSDEVLVHTAEGAPTQPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVYGPSKTWYDPSTRNTKVSTDNEAE---LTSLKKYTNYTVQVLAFTNGGDGVKSEVLTSTTEQDIPG-PPSSVKALAMSEEAILVSWQ-YPEEPNGKIIQYTVYIKELDRSRDIAPKTNKVNALQMSHQVDNLNKKARYEFWVTAHTTIGEGSPSIKVTLSPTNRIP 1288
+IR +H V+ +PY ++ + GN A+FKC +PS V + +V W ++ S G ++++ +G L I +V +DG Y+C T+HR TGET+ S +A +L +++P A+ P SI+ +K G + + C A G+P P +RW K + D R +Q L+I+ + DSG Y+C V N+ G + L V PL + P++ G + C G + + W +NGE + G L ++ + K D G YQCFVR D+ SAQ ++ L P+ +SAF PG VSL C KG P P + W + DG ++ + G+VVSYLNIS + + GG Y C A++ G+V + A++NV G +R M + +AG+ ++ C V GYP S+ W K+ LPFN RQ + NGTL +S+VQ++ D YTC S + VTV PP I PF F + I + F + C + GD P+ ITW+K RP P AS I ID SL I N+ + G Y C A N + +++ V+ PP F ++ Q + + +L C A+G I+W + P R + +G L IK EDS + C +N G+D + + + P T Y + G+ ++S A N ++RY++ K + + + ++P + +G FS SY R V I + + P IE ++ S V D+ + +D H +RM G+ S+E+ + T E AP PP +V + +SSQ+I+VTW +P NG+I+GY++ Y + + T ++E L +LKK+T Y + V A G G S+ + +TT +D+P PP +V+A A S E I +SW +E I+Q I + + V Q S ++D L K Y V A T G+G S ++ +P
Sbjct: 136 KIRSQDVHIKAVLREPYTVRVEDQKAMRGNVAVFKCIIPSSVEAYITVVSW--------EKDTVSLVSGPRFLITSTGALYILDVQNEDGLYNYRCITRHRYTGETRQSNSA-RLFVSDP-ANSAP---SILDGFDHRKAMAGQRVELPCKASGHPTPKYRWLK------DNIPWEPDSRFRQTVTGLLIENTRPSDSGNYVCEVWNNYGTAEMIGRLYVKQPLKATISPRKVKSSVGSQVSLSCSVTGTEDQELSWYRNGEIINPGNNVRITGINRENLIMDGMAKSDGGAYQCFVRKDKMSAQDYVQVILED--GTPKIISAFSEKVVSPGEPVSLMCNVKGTPLPTITWTLDEDPIVKDGSHRISQIITSEGNVVSYLNISNTQVRDGGVYRCTANNSAGVVLYQARINVRGPASIRPMKNITAIAGRDTYIHCRVIGYPYYSIKWYKNSNLLPFNHRQVAFENNGTLKLSDVQKEVDEGEYTCNVLVQPQLSTSQSVHVTVKVPPFIQPFEFPRFSIGQRVF--IPCVVVSGDLPI--------------------------------TITWQK------DGRPIP-------ASLGVTIDNIDFTSSLRISNLSLMHNGNYTCIARNDAAAVEHQSQLIVRVPPRFVVQPSDQDGIYGKAVILNCSAEGYPVPTIVWKYSKGAGVPQFQPIALNGRIQLLTNGSL---LIKHVLEEDSGYYLCKVSNDVGADVSKSMYLTVKIPAMITSYPNTTLATQGQKKEMSCTAHGEKPIIVRWEKEDRIINPEMSRYLVSTKEVGDEVISTLQ--ILPTVREDSGFFSCHAINSYGEDRGIIQLTVQEPPDPPEIEIREVRARSIALRWTMGFDGNSPITGYDIECKNKSDSWDSVQRTKDVSPQLNQATIIDLHPSSTYNIRMYAKNRIGKSEASNELTITTDEAAPDGPPQDVQLEPISSQSIRVTWKAPKKHLQNGIIRGYQIGYREYSAGGNFQFNIISIDTTGDSEVYTLNNLKKFTQYGMVVQACNRAGIGPSSQEIITTTLEDVPSCPPGNVQATATSPETISISWSTLAKETLNGILQGFRVIYWANLLDGELGEIRNVTTTQPSLELDGLEKYTNYSIQVLAFTRAGDGVRSEQIFTRTKEDVP 1215 HSP 3 Score: 114.775 bits (286), Expect = 6.557e-24 Identity = 60/165 (36.36%), Postives = 90/165 (54.55%), Query Frame = 0
Query: 27 FIQEPPNQMDFSNTTGTEIICQSRGTPMPQITWVKGDGSIVQDVPGLRKVMANGNLVLPPFRAEDYNQEVHAQTYRCIAENTLGKVQSRDVQVRAVVHQSYDVYVEMEHVIMGNDVLFKCKIPSYVTDLVQVLDWVESHGNSLKTAPNFVVIQPFETDVGKEYVI 191
F+ ++ F++TTGT + C + G P + W G + DVPG+R V NG L + PF +N +H TY C AEN GK++S+DV ++AV+ + Y V VE + + GN +FKC IPS V + V+ W E SL + P F++ T G Y++
Sbjct: 52 FVNASLQEVVFASTTGTLVPCPAAGIPPVTLRWYLATGEEIYDVPGIRHVHPNGTLQIFPFPPSSFNNLIHDNTYYCTAENPSGKIRSQDVHIKAVLREPYTVRVEDQKAMRGNVAVFKCIIPSSVEAYITVVSW-EKDTVSLVSGPRFLI-----TSTGALYIL 210 HSP 4 Score: 88.1965 bits (217), Expect = 6.618e-16 Identity = 153/647 (23.65%), Postives = 236/647 (36.48%), Query Frame = 0
Query: 333 VITEPLASGKPKFSSIVKLSAFQKTQGGNIAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDDRVKQV--------GGTLII------KEAKVDDSGKYLCMVNNSVG---GESVETVLTVTAPLSVEVEPKQQVVDYGRSATFKCHYDGNP---VKSVYWLKN------GEPVGHTET-TLRINSVKKEDRGMY--QCFVRNDQESAQATGELKLG--GRF---DP----PEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAPYVRKMLPMKVVA--GKSMFVTCPVAGYPISSVTWEKDGRQL-PFNDRQTVYRNGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKII--DGSLI----IKNIKKGNEGYYLCKASNGIGGISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQRE-DSALFTC 931
V +E L + ++ ++ F T G V CPA G P RWY +A + + V GTL I + Y C N G + V + P +V VE ++ + G A FKC + + V W K+ G T T L I V+ ED G+Y +C R+ + TGE + R DP P + FD G V L C A G P P+ +W E D + V+ L I R G Y C+ + G +L V P + P KV + G + ++C V G ++W ++G + P N+ + N I + K D Y C R D+ SA+ + V + + + +F + V++ G+ +MC++ G P P ITW L P D + R +II +G+++ I N + + G Y C A+N G + A+I V+ P S K TA+ +T + C G I W N+ L N R+ + E+ T+ + Q+E D +TC
Sbjct: 41 VFSEDLHASLYFVNASLQEVVFASTTG--TLVPCPAAGIPPVTLRWY-----------LATGEEIYDVPGIRHVHPNGTLQIFPFPPSSFNNLIHDNTYYCTAENPSGKIRSQDVHIKAVLREPYTVRVEDQKAM--RGNVAVFKCIIPSSVEAYITVVSWEKDTVSLVSGPRFLITSTGALYILDVQNED-GLYNYRCITRH-----RYTGETRQSNSARLFVSDPANSAPSILDGFDHRKAMAGQRVELPCKASGHPTPKYRWLKDNIPWEPDSRFR---------QTVTGLLIENTRPSDSGNYVCEVWNNYGTAEMIGRLYVK-QPLKATISPRKVKSSVGSQVSLSCSVTGTEDQELSWYRNGEIINPGNNVRITGINRENLIMDGMAKSDGGAYQCFVRKDK-MSAQDYVQVILEDGTPKIISAFSEKVVSPGEPVSLMCNVK---------------------------------GTPLPTITW------TLDEDPIVKD------GSHRISQIITSEGNVVSYLNISNTQVRDGGVYRCTANNSAGVVLYQARINVRGPASIRPMKNI-TAIAGRDTYIHCRVIGYPYYSIKWYKNSNLLPFNH------RQVAFENN--GTLKLSDVQKEVDEGEYTC 601 HSP 5 Score: 60.4622 bits (145), Expect = 2.125e-7 Identity = 45/132 (34.09%), Postives = 56/132 (42.42%), Query Frame = 0
Query: 1251 VDNLNKKARYEF-WVTAHTTIGEGSPSIKVTL---SPTNRIPAKIASFDDDFVAMVKQDVKLPCIAVGSPNPQLHWKMRGQPIPKNDRIRQLPDGSLQITRVLKEDTGKYVCMVNNKYGQDMVTHELVVNGP 1378
+D N+ Y + +T H GE S L P N P+ + FD AM Q V+LPC A G P P+ W P + R RQ G L I D+G YVC V N YG + L V P
Sbjct: 210 LDVQNEDGLYNYRCITRHRYTGETRQSNSARLFVSDPANSAPSILDGFDHR-KAMAGQRVELPCKASGHPTPKYRWLKDNIPWEPDSRFRQTVTG-LLIENTRPSDSGNYVCEVWNNYGTAEMIGRLYVKQP 339
BLAST of down syndrome cell adhesion molecule isoform x1 vs. SwissProt
Match: gi|12643619|sp|O60469.2|DSCAM_HUMAN (RecName: Full=Down syndrome cell adhesion molecule; AltName: Full=CHD2; Flags: Precursor) HSP 1 Score: 402.134 bits (1032), Expect = 3.927e-112 Identity = 355/1319 (26.91%), Postives = 566/1319 (42.91%), Query Frame = 0
Query: 311 YKCRTKHRLTGETKLSATAGKLVITEPLASGKPKFSSIVKLSAFQK---TQGGNIAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDDRVKQ-------VGGTLIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVTAPLSVEVEPKQQVVDY-GRSATFKCHYDGNPVKSVYWLKNGE--PVGHTET------TLRINSVKKE-DRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCVA-KGDPAPEVKWFIYGSEAESDGVLQVGSF--NSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAP-YVRKMLPMKVVAGKSMFVTCPVAGYPISSVTWE-KDGRQLP------FNDRQTVYRNGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIGGISAVAKIAVQAPP---SFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFGSDDTSINLIIQEKPETPYG----LKVVDKTGRTVKLSWQAPYNGNSNLTRYVIEFKPIKGTWANDVDHVLVPGDQTMAGVFSLRPATSYHFRVVAQNDIGVSGPSDTVTIETAEEAPSGPPVDIRVAAVDQHTLRMGQGPMSDEVLVHTAEGAPTQPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVYGPSKTWYDPSTRNTKVSTDNEAELTSLKKYTNYTVQVLAFTNGGDGVKSEVLTSTTEQDIPGPPSSVKALAMSEEAILVSWQYPEEPNGKIIQYTVY--------IKELDRSRDIAPKTNKVNALQMSHQVDNLNKKARYEFWVTAHTTIGEGSPSIKVTLSPTNRIPAKIASFDDDFVAMVKQDVKLPCIAVGSPNPQLHWKMRGQPIPK----NDRIRQLPDGSLQITRVLKEDTGKYVCMVNNKYGQDMVTHELVVNGPPDPPEVTITSQTTDTITVKLKTSNPEDK--TPVHGYILHYKPEFGD-WNTAQIPFGSDEFTLDSLLCGQRYHLYVTAHNSIGVGPKSTQLTANTKGVEPTVP-EAHRFLEVSAGSVTLHLNAWMDGGCPILYFVVEYKPRHHQDWTLVSNSVKAGGNFVVLDLNPATWYNLRVTAHNNAGFSVAEYEFATLTVTGGTIAPV 1575
Y+C + + KLSA V+ E G PK +SAF + + +++ C +G P+P W +++ L R+ Q V L I ++V D G Y C NNS G + + V P S+ P + + GR C G P S+ W KN P H + TL+++ V+KE D G Y C N Q + + P F+ F+ G V + CV GD + W + DG GS DN D S L IS + G Y C A ++ V H ++L V P +V + + GK++ + C GYP+ ++ W+ G +P N R V NG+L I +V +ED+ Y C ND G + +TV P I + + +G ++ C+ + G++P++ RW E D I+ + + + V++ LQ+ PT + + G++ C A N G + ++ VQ PP EIK + T+ G PI +++ K + D ++ S + + I I + ++ A N G + S L I P G + + + ++++++W+AP + + ++ G Q G ++ F +++ + SG S+ T++ + + V Q R G GP S E++ T E P+ PP V S ++I ++WS+ + NG+++G++V+Y + + +T EL L+KYTNY++QVLAFT GDGV+SE + + T++D+PGPP+ VKA A S + VSW P + NG I +YTV+ I E + S D S+++ NL++ +Y WV A T+ G G+ S +T+ P + PA+I +F +D+ LPC AVG P+P + W P + R +GS I V ED+G Y C+ NN +G D + L V PPD P +T++ T+ +IT+ P D + + GYIL Y + + W + I + L++L CG Y +TA N +G G S + A T G EP E F ++ V L+L W DGGCPI F +EY+P WT + ++++ DL ATWY L++ N+AG + + FATL G TI P+
Sbjct: 383 YQCFVR-----KDKLSAQDYVQVVLE---DGTPKI-----ISAFSEKVVSPAEPVSLMCNVKGTPLPTITW----TLDDDPILKGGSHRISQMITSEGNVVSYLNISSSQVRDGGVYRCTANNSAGVVLYQARINVRGPASIR--PMKNITAIAGRDTYIHCRVIGYPYYSIKWYKNSNLLPFNHRQVAFENNGTLKLSDVQKEVDEGEYTC---NVLVQPQLSTSQSVHVTVKVPPFIQPFEFPRFSIGQRVFIPCVVVSGDLPITITW-------QKDGRPIPGSLGVTIDNIDFTSSLRISNLSLMHNGNYTCIARNEAAAVEHQSQLIVRVPPKFVVQPRDQDGIYGKAVILNCSAEGYPVPTIVWKFSKGAGVPQFQPIALNGRIQVLSNGSLLIKHVV-EEDSGYYLCKVSNDVGADVSKSMYLTVKIPAMITSYP-NTTLATQGQKKEMSCT-AHGEKPIIV-RWEKE----------DRIINPEMARYLVSTKEVGEEVISTLQILPTVRE---------------------------DSGFFSCHAINSYGEDRGIIQLTVQEPPDPPEIEIKDVKARTITLRWTM---GFDGNSPI-TGYDIECKNKSDSWDSAQRTKDVSPQLNSATIIDIHPSSTYSIRMY---AKNRIGKSEPSNELTITADEAAPDGPPQEVHLEPISSQSIRVTWKAP---------------------KKHLQNGIIRGYQI--GYREYSTGGNFQFNIIS---VDTSGDSEVYTLDNLNKF-------TQYGLVVQACNRAGTGPSSQEIITTTLEDVPSYPPENVQAIATSPESISISWSTLSKEALNGILQGFRVIYWANLMDGELGEIKNITTTQPSLELDGLEKYTNYSIQVLAFTRAGDGVRSEQIFTRTKEDVPGPPAGVKAAAASASMVFVSWLPPLKLNGIIRKYTVFCSHPYPTVISEFEASPD-----------SFSYRIPNLSRNRQYSVWVVAVTSAGRGNSSEIITVEPLAKAPARILTFSGTVTTPWMKDIVLPCKAVGDPSPAVKWMKDSNGTPSLVTIDGRRSIFSNGSFIIRTVKAEDSGYYSCIANNNWGSDEIILNLQVQVPPDQPRLTVSKTTSSSITLSWL---PGDNGGSSIRGYILQYSEDNSEQWGSFPISPSERSYRLENLKCGTWYKFTLTAQNGVGPGRISEIIEAKTLGKEPQFSKEQELFASINTTRVRLNLIGWNDGGCPITSFTLEYRPFGTTVWT-TAQRTSLSKSYILYDLQEATWYELQMRVCNSAGCAEKQANFATLNYDGSTIPPL 1576 HSP 2 Score: 330.487 bits (846), Expect = 9.131e-90 Identity = 292/1107 (26.38%), Postives = 460/1107 (41.55%), Query Frame = 0
Query: 222 EIRPGQIH---VVYQPYQQEASNEYVIVGNSALFKCEVPSFVADVVDLVGWIDSEGTSFDRSQHSNYDG-KYVVLPSGELQIRNVSPDDGFKTYKCRTKHRLTGETKLSATAGKLVITEPLASGKPKFSSIVKLSAFQKTQGG-NIAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDDRVKQVGGTLIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVTAPLSVEVEPKQQVVDYGRSATFKCHYDGNPVKSVYWLKNGEPV---------GHTETTLRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAPYVRKMLPMKVVAGKSMFVTCPVAGYPISSVTWEKDGRQLPFNDRQTVYR-NGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIID--GSLIIKNIKKGNEGYYLCKASNGIGGISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDP-RYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFGSDDTSINLIIQEKPE--TPYGLKVVDKTGRTVKLSWQAPYNG-------------NSNLTRYVIEFKPIKGTWANDVDHVLVPGDQTMAGVFSLRPATSYHFRVVAQNDIGVSGPSDTVTIETAEEAPSGPPVDIRVAAVDQHTLRMGQGPMSDEVLVHTAEGAPTQPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVYGPSKTWYDPSTRNTKVSTD-NEAELTSLKKYTNYTVQVLAFTNGGDGVKSEVLTSTTEQDIP-GPPSSVKALAMSEEAILVSWQYPEE--PNGKIIQYTVYIKELDRSRDIAPKTNKVNALQMS--HQVDNLNKKARYEFWVTAHTTIGEGSPSIKVTLSPTNRIPA 1289
+IR +H V+ +PY ++ + GN A+FKC +PS V + +V W ++ S G ++++ +G L I++V +DG Y+C T+HR TGET+ S +A +L +++P A+ P SI+ +K G + + C A G+P P +RW K +N L L R ++ L+I+ + DSG Y+C V+N G V L V PL + P++ G + C G + + W +NGE + G L ++ + K D G YQCFVR D+ SAQ ++ L P+ +SAF P VSL C KG P P + W + G ++ + G+VVSYLNIS ++ + GG Y C A++ G+V + A++NV G +R M + +AG+ ++ C V GYP S+ W K+ LPFN RQ + NGTL +S+VQ++ D YTC S + VTV PP I PF F + I + F + C + GD P+ ITW+K RP P S I ID SL I N+ + G Y C A N + +++ V+ PP F ++ R Q + + +L C A+G I+W + P R + +G L IK EDS + C +N G+D + + + P T Y + G+ ++S A N + RY++ K + + + ++P + +G FS SY G + T +E P P ++I+ TLR G N I GY + +D + R VS N A + + + Y++++ A G S LT T ++ P GPP V +S ++I V+W+ P++ NG I Y + +E + V+ S + +DNLNK +Y V A G G S ++ + +P+
Sbjct: 110 KIRSQDVHIKAVLREPYTVRVEDQKTMRGNVAVFKCIIPSSVEAYITVVSW--------EKDTVSLVSGSRFLITSTGALYIKDVQNEDGLYNYRCITRHRYTGETRQSNSA-RLFVSDP-ANSAP---SILDGFDHRKAMAGQRVELPCKALGHPEPDYRWLK-----DNMPL-ELSGRFQKTVTGLLIENIRPSDSGSYVCEVSNRYGTAKVIGRLYVKQPLKATISPRKVKSSVGSQVSLSCSVTGTEDQELSWYRNGEILNPGKNVRITGINHENLIMDHMVKSDGGAYQCFVRKDKLSAQDYVQVVLED--GTPKIISAFSEKVVSPAEPVSLMCNVKGTPLPTITWTLDDDPILKGGSHRISQMITSEGNVVSYLNISSSQVRDGGVYRCTANNSAGVVLYQARINVRGPASIRPMKNITAIAGRDTYIHCRVIGYPYYSIKWYKNSNLLPFNHRQVAFENNGTLKLSDVQKEVDEGEYTCNVLVQPQLSTSQSVHVTVKVPPFIQPFEFPRFSIGQRVF--IPCVVVSGDLPI--------------------------------TITWQK------DGRPIP-------GSLGVTIDNIDFTSSLRISNLSLMHNGNYTCIARNEAAAVEHQSQLIVRVPPKFVVQPRDQDGIYGKAVILNCSAEGYPVPTIVWKFSKGAGVPQFQPIALNGRIQVLSNGSL---LIKHVVEEDSGYYLCKVSNDVGADVSKSMYLTVKIPAMITSYPNTTLATQGQKKEMSCTAHGEKPIIVRWEKEDRIINPEMARYLVSTKEVGEEVISTLQ--ILPTVREDSGFFSCHAINSY-------------GEDRGIIQLTVQEPPDPPEIEIKDVKARTITLRWTMG-----------------------------------------FDGNSPITGYDIECKNKSDSWDSAQRTKDVSPQLNSATIIDIHPSSTYSIRMYAKNRIGKSEPSNELTITADEAAPDGPPQEVHLEPISSQSIRVTWKAPKKHLQNGIIRGYQIGYREYSTGGNFQFNIISVDTSGDSEVYTLDNLNKFTQYGLVVQACNRAGTGPSSQEIITTTLEDVPS 1089 HSP 3 Score: 109.383 bits (272), Expect = 2.698e-22 Identity = 59/175 (33.71%), Postives = 93/175 (53.14%), Query Frame = 0
Query: 16 LFAQSDTNGPVFIQEPPNQMDFSNTTGTEIICQSRGTPMPQITWVKGDGSIVQDVPGLRKVMANGNLVLPPFRAEDYNQEVHAQTYRCIAENTLGKVQSRDVQVRAVVHQSYDVYVEMEHVIMGNDVLFKCKIPSYVTDLVQVLDWVESHGNSLKTAPNFVVIQPFETDVGKEYV 190
+F++ + F+ ++ F++TTGT + C + G P + W G + DVPG+R V NG L + PF ++ +H TY C AEN GK++S+DV ++AV+ + Y V VE + + GN +FKC IPS V + V+ W E SL + F++ T G Y+
Sbjct: 15 VFSEDLHSSLYFVNASLQEVVFASTTGTLVPCPAAGIPPVTLRWYLATGEEIYDVPGIRHVHPNGTLQIFPFPPSSFSTLIHDNTYYCTAENPSGKIRSQDVHIKAVLREPYTVRVEDQKTMRGNVAVFKCIIPSSVEAYITVVSW-EKDTVSLVSGSRFLI-----TSTGALYI 183 HSP 4 Score: 92.4337 bits (228), Expect = 3.415e-17 Identity = 154/641 (24.02%), Postives = 239/641 (37.29%), Query Frame = 0
Query: 333 VITEPLASGKPKFSSIVKLSAFQKTQGGNIAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDDRVKQV--------GGTLII------KEAKVDDSGKYLCMVNNSVG---GESVETVLTVTAPLSVEVEPKQQVVDYGRSATFKCHYDGNP---VKSVYWLKN------GEPVGHTET-TLRINSVKKEDRGMY--QCFVRNDQESAQATGELKLG--GRF---DP----PEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAPYVRKMLPMKVVA--GKSMFVTCPVAGYPISSVTWEKDGRQL-PFNDRQTVYRNGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIGGISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQRE-DSALFTC 931
V +E L S ++ ++ F T G V CPA G P RWY +A + + V GTL I + + Y C N G + V + P +V VE ++ + G A FKC + + V W K+ G T T L I V+ ED G+Y +C R+ + TGE + R DP P + FD G V L C A G P P+ +W E G Q V+ L I R G+Y C+ S++ G +L V P + P KV + G + ++C V G ++W ++G L P + + N I + K D Y C R D+ SA+ + V + + + +F + V++ + +MC++ PL WT++ D +G +I IT + VV+ L + + ++ DG G Y C A+N G + A+I V+ P S K TA+ +T + C G I W N+ L N R+ + E+ T+ + Q+E D +TC
Sbjct: 15 VFSEDLHSSLYFVNASLQEVVFASTTG--TLVPCPAAGIPPVTLRWY-----------LATGEEIYDVPGIRHVHPNGTLQIFPFPPSSFSTLIHDNTYYCTAENPSGKIRSQDVHIKAVLREPYTVRVEDQKTM--RGNVAVFKCIIPSSVEAYITVVSWEKDTVSLVSGSRFLITSTGALYIKDVQNED-GLYNYRCITRH-----RYTGETRQSNSARLFVSDPANSAPSILDGFDHRKAMAGQRVELPCKALGHPEPDYRWLKDNMPLELSGRFQ---------KTVTGLLIENIRPSDSGSYVCEVSNRYGTAKVIGRLYVK-QPLKATISPRKVKSSVGSQVSLSCSVTGTEDQELSWYRNGEILNPGKNVRITGINHENLIMDHMVKSDGGAYQCFVRKDK-LSAQDYVQVVLEDGTPKIISAFSEKVVSPAEPVSLMCNVK--GTPLPTITWTLD--DDPILKGGSHRIS--------QMITSEGNVVSYLNISSS---------------QVRDG------------GVYRCTANNSAGVVLYQARINVRGPASIRPMKNI-TAIAGRDTYIHCRVIGYPYYSIKWYKNSNLLPFNH------RQVAFENN--GTLKLSDVQKEVDEGEYTC 575 HSP 5 Score: 63.929 bits (154), Expect = 1.452e-8 Identity = 44/131 (33.59%), Postives = 59/131 (45.04%), Query Frame = 0
Query: 1252 DNLNKKARYEF-WVTAHTTIGEGSPSIKVTL---SPTNRIPAKIASFDDDFVAMVKQDVKLPCIAVGSPNPQLHWKMRGQPIPKNDRIRQLPDGSLQITRVLKEDTGKYVCMVNNKYGQDMVTHELVVNGP 1378
D N+ Y + +T H GE S L P N P+ + FD AM Q V+LPC A+G P P W P+ + R ++ G L I + D+G YVC V+N+YG V L V P
Sbjct: 185 DVQNEDGLYNYRCITRHRYTGETRQSNSARLFVSDPANSAPSILDGFDHR-KAMAGQRVELPCKALGHPEPDYRWLKDNMPLELSGRFQKTVTG-LLIENIRPSDSGSYVCEVSNRYGTAKVIGRLYVKQP 313
BLAST of down syndrome cell adhesion molecule isoform x1 vs. SwissProt
Match: gi|939319686|sp|E1C8P7.2|DSCL1_CHICK (RecName: Full=Down syndrome cell adhesion molecule-like protein 1 homolog; Flags: Precursor) HSP 1 Score: 392.889 bits (1008), Expect = 3.991e-109 Identity = 356/1324 (26.89%), Postives = 571/1324 (43.13%), Query Frame = 0
Query: 323 TKLSATAGKLVITEPLASGKPKFSSIVKLSAFQKTQGGNIAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDD---------RVKQV---GGTLI----IKEAKVDDSGKYLCMVNNSVGGESVETVLTVTAPLSVEVEPKQQVVDYGRSATFKCHYDGNPVKSVYWLK-------NGEPVGHTETTLRINSVKK-EDRGMYQCFVR-----NDQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCV-AKGDPAPEVKWFIYGSEAESDG--VLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAP-YVRKMLPMKVVAGKSMFVTCPVAGYPISSVTWE--------KDGRQLPFNDRQTVYRNGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIGGISAVAKIAVQAPPS------FEIKKRTQ----TALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFGSDDTSINLIIQEKPETPYG----LKVVDKTGRTVKLSWQAPYNGNSNLTRYVIEFKPIKGTWANDVDHVLVPGDQTMAGVFSLRPATSYHFRVVAQNDIGVSGPSDTVTIETAEEAPSGPPVDIRVAAVDQHTLRMGQGPMSDEVLVHTAEGAPTQPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVYGPSKTWYDPSTRNTKVSTDNEAELTSLKKYTNYTVQVLAFTNGGDGVKSEVLTSTTEQDIPGPPSSVKALAMSEEAILVSWQYPEEPNGKIIQYTVYIKELDRSRDIAPKTNKVNALQMSHQVDNLNKKARYEFWVTAHTTIGEGSPSIKVTLSPTNRIPAKIASFDDDFVAMVKQDVKLPCIAVGSPNPQLHWKMRGQ----PIPKNDRIRQLPDGSLQITRVLKEDTGKYVCMVNNKYGQDMVTHELVVNGPPDPPEVTITSQTTDTITVKLKTSNPEDK--TPVHGYILHYKPEFG-DWNTAQIPFGSDEFTLDSLLCGQRYHLYVTAHNSIGVGPKSTQLTANTKGVEPTVP-EAHRFLEVSAGSVTLHLNAWMDGGCPILYFVVEYKPRHHQDW-TLVSNSVKAGGNFVVLDLNPATWYNLRVTAHNNAGFSVAEYEFATLTVTGGTIAPVREIDGSG 1582
T+ S TA I L G P+ S S G ++ C A+G P P W ALDD R Q GT + + ++ D G Y C NSVG + + V P S+ V GR C G P S+ W K N V TL++ V+K D G Y C V + +S T ++ P + F+ G ++ + CV + GD + W DG +L ++ + +S L IS K+ G Y C AS+ VS +L V P +V + + GK+ + C V GYP V W+ + +P R + N +L I +V +ED Y C A N G + +TV + PA++ + +G ++ C+ +RG+ P++ RW K D P+ + A+ A+ D ++I +L +K +G+ ++ C A N G + ++ VQ PP E+K R+ T N+++ K W+ K+ N+ P TI + + D +++ R + N G + S L I + P G + + T ++++++W+AP ++ + ++ G Q G P ++ + +V ++ +G S+ T++ ++ + V Q R G GP S E+ T E P+QPP V +++S ++WS PP ++ NGV+KGY+V++ + +T EL ++K+TNY+VQVLA+T GDGV+S VL T++DIPGPP+ +KA+ S +++VSW P +PNG I +YT++ S AP + + Q+ +++ +LN+ +Y WV A T+ G G+ S KVT+ P + PAKI SF +DV+LPC +VG P P + W + P+ + +G+L + V ED+G Y C N +G D + L+V PPD P +T++ + +IT+ P D + + G++L Y + +W I F L+SL CG Y + + A NS+G G S + A T G EP+ + H F +++ L+L W GGCPI V+EY+P+ + W +L +NS G + +L ATWY LR+ A N+AG +FATL G TI P++ G G
Sbjct: 390 TRKSQTAQDFSIIT-LEDGTPRIVS--SFSEKVVNPGEQFSLMCAAKGAPPPTVTW-------------ALDDEPIPRDNGHRTNQYTMSDGTTVSHMNVTSPQIKDGGVYRCTARNSVGSAEYQARINVRGPPSIRAMKNITAVA-GRDTFINCRVIGYPYYSIKWYKDSLLLPDNHRQVVFENGTLKLMDVQKGMDEGEYLCSVLIQPQLSISQSVHVTVKV--------PPLIQPFEFPPASIGQLLYIPCVVSSGDMPIHITW-------RKDGHVILSGSGVTIESKEFMSSLQISSVSLKHNGNYTCIASNAAATVSRERQLIVRVPPRFVVQPNNQDGIYGKAGVLNCSVDGYPPPKVMWKHAKGSGNPQQYHPIPLTGRIQILPNSSLLIRHVL-EEDIGYYLCQASNGVGTDISKSMFLTV-KIPAMITSHPNTTIAIKGQSKELNCT-ARGERPII-IRWE------------------KGDTVIDPDRNMRYAI-----------------ATKDNGDEVI-STLKLKPADRGDSVFFSCHAINSYGEDRGLIQLTVQEPPDPPELEIREVKARSMNLRWTQRFDGNSIITGFDIEYKNKSDSWDF--KQSTRNISP--TINQANIVDLHPASVYSIRM----------YSFNKIGRSEPSKELTISTEEAAPDGPPMDVTLQPMTSQSIQVTWKAP---------------------KKELQNGVIRGYQI--GYRENSPGSNGQYSIV---EMKATGDSEVYTLDNLKKFA-------QYGVVVQAFNRAGTGPSSSEINATTLEDVPSQPPENVRAISITSDVAVISWSEPPRSTLNGVLKGYRVIFWSLYMDGEWGEMQNITTTRERVELRGMEKFTNYSVQVLAYTQAGDGVRSSVLYIQTKEDIPGPPAGIKAVPSSASSVVVSWLPPAKPNGIIRKYTIFCSS-PGSGQPAPSEYETSPDQLFYRIAHLNRGQQYMLWVAAVTSAGRGNISEKVTIEPAGKAPAKIISFGGTVTTPWMKDVRLPCNSVGEPVPAIKWTKDSEDSAIPVTVDGHRLIQANGTLVLRSVKAEDSGYYTCTATNTWGFDTIIINLLVQVPPDQPRLTVSKTSASSITLAWI---PGDNGGSSIRGFVLQYSVDNSEEWKDVFISSSERSFKLESLKCGTWYKVKLAAKNSVGAGRISEIIEAKTHGREPSFSKDQHLFTHINSTHARLNLQGWSSGGCPITAIVLEYRPKGNWGWQSLRTNS---SGEVFLTELREATWYELRMKACNSAGCGNESTQFATLDYDGSTIPPIKSAQGEG 1587 HSP 2 Score: 374.785 bits (961), Expect = 1.524e-103 Identity = 349/1333 (26.18%), Postives = 571/1333 (42.84%), Query Frame = 0
Query: 3 SLRKELSWCCGILLFAQSDTNGPVFIQEPPNQMDFSNTTGTEIICQSRGTPMPQITWVKGDGSIVQDVPGLRKVMANGNLVLPPFRAEDYNQEVHAQTYRCIAENTLGKVQSRDVQVRAVVHQSYDVYVEMEHVIMGNDVLFKCKIPSYVTDLVQVLDWVESHGNSLKTAPNFVVIQPFETDVGKEYV--ILGNDAL--MKCSIPSFVADQLEVVSWHGSDGSEIRPGQ-IHVVYQPYQQEASNEYVIVGNSALFKCEVPSFVADVVD-LVGWIDSEGTSFDRSQHSNYDGKYVVLPSGELQIRNVSPDDGFKTYKCRTKHRLTGETKLSATAGKLVITEPL-ASGKPKFSSIVKLSAFQKTQGGNIAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDDRVKQVG---GTLIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVTAPLSVEVEP-KQQVVDYGRSATFKCHYDGNPVKSVYWLKNGEPV---------------GHTETTLRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDGVLQVGSFNS---DNGDVVSYLNISQARTKYGGTYECQASSKVGL-VSHSAKLNVNGAPYVRKMLPMKVVAGKSMFVTCPVAG--YPISSVTWEKDGRQLPFNDRQTVYRN---GTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLR--PRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWK--KAVVNNLQMRPTPNDYQDFDASNDRNIKII-DGSLIIKNIKKGNEGYYLCKASNGIG-GISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFGSDDTSINLIIQEKPETPYGLKVVDKTGRTVKLSWQAPYNGNSNLTRYVIEFKPIKGTWANDVDHVLVPGDQTMAGVFSLRPATSYHFRVVAQNDIGVSGPSDTVTIETAEEAPSGPPVDIRVAAVDQHTLRMGQGPMSDEVLVHTAEGAPTQPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVYGPSKTWYDP--STRNTKVSTDNEA-ELTSLKKYTNYTVQVLAFTNGGDGVKSEVLTSTTEQDIPG-PPSSVKALAMSEEAILVSWQYPEEP--NGKIIQYTVYIKELDRSRDIAPKTNKVNALQMSHQVDNLNKKARYEFWVTAHTTIGEGSPSIKVTLSPTNRIP 1288
SLRK + G L+ F+ + Q+ FS+T G I C + G+P + W G + DVP +R V ANG L L PF +N +H Y C AEN+ GK++S +++V+AV + Y V VE + + GN +FKC IPS V + V V+ W E S+ F F T G Y+ + DAL +C + + + S+ P + I + +Q +V E+P + + + W+ +G DG++ +G L I ++ +D TY C +T + G L + +PL + PK + G + ++C G P V RWY+ N LV +DD + G TL+I A+ SG Y C +++T+ V ++VV+ G + C G P +V W + EP+ G T + + + S + +D G+Y+C RN SA+ + + G P + A +T G + C G P +KW+ D +L + +NG + +++ + + G Y C + L +S S + V P ++ G+ +++ C V+ PI +TW KDG + T+ +L IS+V K + + YTC+A N ++SR + ++R PR+ V+P ++ G ++C DG+P P++ WK K N Q P P + I+I+ + SL+I+++ + + GYYLC+ASNG+G IS + V+ P T A+ ++ L C A+GE+PI I W + +D + + RY I + D ++ST+ +K R DS F+C A N++G D I L +QE P+ P L++ + R++ L W ++GNS +T + IE+K +W + A + L PA+ Y R+ + N IG S PS +TI T E AP GPP+D+ + QP ++SQ+I+VTW +P NGVI+GY++ Y + + S K + D+E L +LKK+ Y V V AF G G S + +TT +D+P PP +V+A++++ + ++SW P NG + Y V L + N + + ++ + K Y V A+T G+G S + + IP
Sbjct: 11 SLRKAHTEDVGTSLY---------FVNDSIQQVTFSSTVGVVIPCPAAGSPSAVLRWYLATGDDIYDVPHIRHVHANGTLQLYPFSPSAFNSFIHDNDYFCTAENSAGKIRSPNIRVKAVFREPYTVRVEDQRSMRGNVAVFKCLIPSSVQEYVSVVSW-EKDTVSIIPENRF-----FITSYGGLYISDVQKEDALSTYRCITKHKYSGETRQSNGARLSVSDADPAESIPTMLDSFQSREVRAGRLV--------ELPCIASGYPNPAIRWL-KDGRPLPA------DGRWAKRITG-LSIADLRVEDS-GTYIC----EVTNTFGSAEVTGTLTVIDPLRVTLTPK--------KLKTGIGSTVILSCALSGSPEYVIRWYR------NTDLVVVDDFISIRGISNETLLITAAQKSHSGAYQCFATRKSQTAQDFSIITLEDGTPRIVSSFSEKVVNPGEQFSLMCAAKGAPPPTVTWALDDEPIPRDNGHRTNQYTMSDGTTVSHMNVTSPQIKDGGVYRCTARNSVGSAEYQARINVRG----PPSIRAMKNITAVAGRDTFINCRVIGYPYYSIKWY-------KDSLLLPDNHRQVVFENG-TLKLMDVQKGMDE--GEYLCSVLIQPQLSISQSVHVTVKVPPLIQPFEFPPASIGQLLYIPCVVSSGDMPI-HITWRKDGHVILSGSGVTIESKEFMSSLQISSVSLKHNGN-YTCIASN-------------------------------------AAATVSRERQLIVRVPPRFVVQPNNQDGIYGKAGVLNCSVDGYPPPKVMWKHAKGSGNPQQYHPIPLTGR---------IQILPNSSLLIRHVLEEDIGYYLCQASNGVGTDISKSMFLTVKIPAMITSHPNTTIAIKGQSKELNCTARGERPIIIRWEKGDTVIDPDRNMRYAIATKDNGDEVISTLKLKPADRGDSVFFSCHAINSYGEDRGLIQLTVQEPPDPP-ELEIREVKARSMNLRWTQRFDGNSIITGFDIEYKNKSDSWDFKQSTRNISPTINQANIVDLHPASVYSIRMYSFNKIGRSEPSKELTISTEEAAPDGPPMDVTL-----------------------------QP--------MTSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEINATTLEDVPSQPPENVRAISITSDVAVISWSEPPRSTLNGVLKGYRVIFWSLYMDGEWGEMQN-ITTTRERVELRGMEKFTNYSVQVLAYTQAGDGVRSSVLYIQTKEDIP 1192 HSP 3 Score: 69.3218 bits (168), Expect = 3.848e-10 Identity = 49/135 (36.30%), Postives = 64/135 (47.41%), Query Frame = 0
Query: 1264 VTAHTTIGEGSPSIKVTLS-----PTNRIPAKIASFDDDFVAMVKQDVKLPCIAVGSPNPQLHWKMRGQPIPKNDRIRQLPDGSLQITRVLKEDTGKYVCMVNNKYGQDMVTHELVVNGPPDPPEVTITSQTTDT 1393
+T H GE S LS P IP + SF V + V+LPCIA G PNP + W G+P+P + R + G L I + ED+G Y+C V N +G VT L V DP VT+T + T
Sbjct: 198 ITKHKYSGETRQSNGARLSVSDADPAESIPTMLDSFQSREVRAGRL-VELPCIASGYPNPAIRWLKDGRPLPADGRWAKRITG-LSIADLRVEDSGTYICEVTNTFGSAEVTGTLTV---IDPLRVTLTPKKLKT 327
BLAST of down syndrome cell adhesion molecule isoform x1 vs. SwissProt
Match: gi|73620825|sp|Q8TD84.2|DSCL1_HUMAN (RecName: Full=Down syndrome cell adhesion molecule-like protein 1; AltName: Full=Down syndrome cell adhesion molecule 2; Flags: Precursor) HSP 1 Score: 389.808 bits (1000), Expect = 3.211e-108 Identity = 365/1362 (26.80%), Postives = 585/1362 (42.95%), Query Frame = 0
Query: 285 YDGKYVVLPSGELQIRNVSPDDGFKT--YKCRTKHRLTGETKLSATAGKLVITEPLASGKPKFSSIVKLSAFQKTQGGNIAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDD---------RVKQV---GGTLI----IKEAKVDDSGKYLCMVNNSVGGESVETVLTVTAPLSVEVEPKQQVVDYGRSATFKCHYDGNPVKSVYWLKNGE--PVGHTET-----TLRINSVKK-EDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCV-AKGDPAPEVKWFIYGSEAESDG--VLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAP-YVRKMLPMKVVAGKSMFVTCPVAGYPISSVTWE--------KDGRQLPFNDRQTVYRNGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIGGISAVAKIAVQAPP---SFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFGSDDTSINL--IIQEKPETPYGLKV--VDKTGR-------TVKLSWQAPYNGNSNLTRYVIEFKPIKGTWA---NDVDHVLVPGDQTMAGVFSLRPATSYHFRVVAQNDIGVSGPSDTVTIETAEEAPSGPPVDIRVAAVDQHTLRMGQGPMSDEVLVHTAEGAPTQPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVYGPSKTWYDPSTRNTKVSTDNEAELTSLKKYTNYTVQVLAFTNGGDGVKSEVLTSTTEQDIPGPPSSVKALAMSEEAILVSWQYPEEPNGKIIQYTVYIKELDRSRDIAPKTNKVNALQMSHQVDNLNKKARYEFWVTAHTTIGEGSPSIKVTLSPTNRIPAKIASFDDDFVAMVKQDVKLPCIAVGSPNPQLHWKMRGQ----PIPKNDRIRQLPDGSLQITRVLKEDTGKYVCMVNNKYGQDMVTHELVVNGPPDPPEVTITSQTTDTITVKLKTSNPEDK--TPVHGYILHYKPEFG-DWNTAQIPFGSDEFTLDSLLCGQRYHLYVTAHNSIGVGPKSTQLTANTKGVEPTVP-EAHRFLEVSAGSVTLHLNAWMDGGCPILYFVVEYKPRHHQDWT-LVSNSVKAGGNFVVLDLNPATWYNLRVTAHNNAGFSVAEYEFATLTVTGGTIAPVREIDGSG 1582
Y +VLP + IR +S + T K + T+ + TA I L G P+ S S G ++ C A+G P P W ALDD R Q GT I + ++ D G Y C N VG + + V P S+ V GR C G P S+ W K+ P H + TL++ V+K D G Y C V Q + + + + P + F+ G ++ + CV + GD + W DG ++ ++ + +S L IS K+ G Y C AS+ VS +L V P +V + + GK+ + C V GYP V W+ + +P R + N +L I +V +ED Y C A N G + +TV + PA++ + +G ++ C+ +RG+ P++ RW K D P+ + A+ A+ D +++ +L +K +G+ ++ C A N G + ++ VQ PP EI+ E K + + + W +R D N +++ I+ + DS F N +IN I+ P + Y +++ +K GR T+ AP ++T + + I+ TW ++ + ++ G Q G P ++ + +V ++ +G S+ T++ ++ + V Q R G GP S E+ T E P+QPP V +++S ++WS PP ++ NGV+KGY+V++ + +T EL ++K+TNY+VQVLA+T GDGV+S VL T++D+PGPP+ +KA+ S +++VSW P +PNG I +YT++ S AP + + Q+ +++ +LN+ +Y WV A T+ G G+ S KVT+ P + PAKI SF +DV+LPC +VG P P + W + P+ + +G+L + V ED+G Y C N G D + L+V PPD P +T++ + +IT+ T P D + + G++L Y + +W I F LDSL CG Y + + A NS+G G S + A T G EP+ + H F +++ L+L W +GGCPI V+EY+P+ W L +NS G + +L ATWY LR+ A N+AG +FATL G TI P++ G G
Sbjct: 349 YRNTELVLPDEAISIRGLSNETLLITSAQKSHSGAYQCFATRKAQTAQDFAIIA-LEDGTPRIVS--SFSEKVVNPGEQFSLMCAAKGAPPPTVTW-------------ALDDEPIVRDGSHRTNQYTMSDGTTISHMNVTGPQIRDGGVYRCTARNLVGSAEYQARINVRGPPSIRAMRNITAVA-GRDTLINCRVIGYPYYSIKWYKDALLLPDNHRQVVFENGTLKLTDVQKGMDEGEYLCSVL-IQPQLSISQSVHVAVKV--PPLIQPFEFPPASIGQLLYIPCVVSSGDMPIRITW-------RKDGQVIISGSGVTIESKEFMSSLQISSVSLKHNGNYTCIASNAAATVSRERQLIVRVPPRFVVQPNNQDGIYGKAGVLNCSVDGYPPPKVMWKHAKGSGNPQQYHPVPLTGRIQILPNSSLLIRHVL-EEDIGYYLCQASNGVGTDISKSMFLTV-KIPAMITSHPNTTIAIKGHAKELNCT-ARGERPIII-RWE------------------KGDTVIDPDRVMRYAI-----------------ATKDNGDEVVS-TLKLKPADRGDSVFFSCHAINSYGEDRGLIQLTVQEPPDPPELEIR----------------EVKA-RSMNLRWT---QRFDGN--------------SIITGFDIEYKNKSDSWDFKQSTRNI----SPTINQANIVDLHPASVYSIRMYSFNKIGRSEPSKELTISTEEAAPDGPPMDVTLQPVTSQSIQVTWKAPKKELQNGVIRGYQI--GYRENSPGSNGQYSIV---EMKATGDSEVYTLDNLKKFA-------QYGVVVQAFNRAGTGPSSSEINATTLEDVPSQPPENVRALSITSDVAVISWSEPPRSTLNGVLKGYRVIFWSLYVDGEWGEMQNITTTRERVELRGMEKFTNYSVQVLAYTQAGDGVRSSVLYIQTKEDVPGPPAGIKAVPSSASSVVVSWLPPTKPNGVIRKYTIFCSS-PGSGQPAPSEYETSPEQLFYRIAHLNRGQQYLLWVAAVTSAGRGNSSEKVTIEPAGKAPAKIISFGGTVTTPWMKDVRLPCNSVGDPAPAVKWTKDSEDSAIPVSMDGHRLIHTNGTLLLRAVKAEDSGYYTCTATNTGGFDTIIVNLLVQVPPDQPRLTVSKTSASSITL---TWIPGDNGGSSIRGFVLQYSVDNSEEWKDVFISSSERSFKLDSLKCGTWYKVKLAAKNSVGSGRISEIIEAKTHGREPSFSKDQHLFTHINSTHARLNLQGWNNGGCPITAIVLEYRPKGTWAWQGLRANS---SGEVFLTELREATWYELRMRACNSAGCGNETAQFATLDYDGSTIPPIKSAQGEG 1586 HSP 2 Score: 370.163 bits (949), Expect = 4.025e-102 Identity = 315/1162 (27.11%), Postives = 489/1162 (42.08%), Query Frame = 0
Query: 230 VVYQPYQQEASNEYVIVGNSALFKCEVPSFVADVVDLVGWIDSEGTSFDRSQHSNYDGKYVVLPSGELQIRNVSPDDGFKTYKCRTKHRLTGETKLSATAGKLVITEPLASGKPKFSSIVKLSAFQKTQ---GGNIAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDDRVKQVGGTLIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVTAPLSVEVEPKQQVVDYGRSATFKCHYDGNPVKSVYWLKNGEPV---------GHTETTLRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAPYVRKMLPMKVVAGKSMFVTCPVAGYPISSVTWEKDGRQLPFNDRQTVYRNGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNI--KIIDGSLIIKNIKKGNEGYYLCKASNGIGGISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDP-RYTIREESQEDGML--STISIKRTQREDSALFTCVATNAFGSD-------DTSINLIIQEKPETPYGLK-------VVDKTGRTVKLSWQAPYNGNS-----NLTRYVIEFKPIKGTWANDVDHV-----LVPGDQTMAGVFSLRPATSY------------------------------HFR---------VVAQNDIGVSGPSDTVTIETAEEAPSGPPVDIRVAAVDQH-----TLRM------GQGPMSDEVLVHTAEGAPTQPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVYGPSKTWYDP--STRNTKVSTDNEA-ELTSLKKYTNYTVQVLAFTNGGDGVKSEVLTSTTEQDIPG-PPSSVKALAMSEEAILVSWQYPEEP--NG-----KIIQYTVYIK-ELDRSRDIAPKTNKVNALQMSHQVDNLNKKARYEFWVTAHTTIGEGSPSIKVTLSPTNRIP 1288
V +PY ++ + GN A+FKC +PS V + V +V W + T +H ++ + G L I +V +D TY+C TKH+ +GET+ S A +L +T+P A P L F + G + + C A GYPIP RW K + + L A K++ G L I + + +DSG Y+C V N+ G +L V PL V + PK+ G + C G+P ++ W +N E V G + TL I S +K G YQCF ++AQ + L P VS+F PG SL C AKG P P V W + DG + + +G +S++N++ + + GG Y C A + VG + A++NV G P +R M + VAG+ + C V GYP S+ W KD LP N RQ V+ NGTL +++VQ+ D Y C S + V V PP I PF F I G + C +S GD P+ ITW+K D Q + + I K SL I ++ + G Y C ASN +S ++ V+ PP F ++ Q + + VL C G P ++W K + +P +Y + +L S++ I+ ED + C A+N G+D I +I P T +K + R + + W+ G++ + RY I K ++ D V L P D+ + FS SY + R ++ DI SD+ + + S P + VD H ++RM G+ S E+ + T E AP PP +V + ++SQ+I+VTW +P NGVI+GY++ Y + + S K + D+E L +LKK+ Y V V AF G G S + +TT +D+P PP +V+AL+++ + ++SW P NG ++I +++Y+ E ++I +V ++ + K Y V A+T G+G S + + +P
Sbjct: 122 VFREPYTVRVEDQRSMRGNVAVFKCLIPSSVQEYVSVVSW--EKDTVSIIPEH-----RFFITYHGGLYISDVQKEDALSTYRCITKHKYSGETRQSNGA-RLSVTDP-AESIPTI-----LDGFHSQEVWAGHTVELPCTASGYPIPAIRWLK-----DGRPLPADSRWTKRITG-LTISDLRTEDSGTYICEVTNTFGSAEATGILMVIDPLHVTLTPKKLKTGIGSTVILSCALTGSPEFTIRWYRNTELVLPDEAISIRGLSNETLLITSAQKSHSGAYQCFATRKAQTAQDFAIIALED--GTPRIVSSFSEKVVNPGEQFSLMCAAKGAPPPTVTWALDDEPIVRDGSHRTNQYTMSDGTTISHMNVTGPQIRDGGVYRCTARNLVGSAEYQARINVRGPPSIRAMRNITAVAGRDTLINCRVIGYPYYSIKWYKDALLLPDNHRQVVFENGTLKLTDVQKGMDEGEYLCSVLIQPQLSISQSVHVAVKVPPLIQPFEFPPASI--GQLLYIPCVVSSGDMPI--------------------------------RITWRK-------------DGQVIISGSGVTIESKEFMSSLQISSVSLKHNGNYTCIASNAAATVSRERQLIVRVPPRFVVQPNNQDGIYGKAGVLNCSVDGYPPPKVMW----KHAKGSGNPQQYHPVPLTGRIQILPNSSLLIRHVLEEDIGYYLCQASNGVGTDISKSMFLTVKIPAMITSHPNTTIAIKGHAKELNCTARGERPIIIRWE---KGDTVIDPDRVMRYAIATK-------DNGDEVVSTLKLKPADRGDSVFFSCHAINSYGEDRGLIQLTVQEPPDPPELEIREVKARSMNLRWTQRFDGNSIITGFDIEYKNKSDSWDFKQSTRNIS--PTINQANIVDLHPASVYSIRMYSFNKIGRSEPSKELTISTEEAAPDGPPMDVTLQPVTSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEINATTLEDVPSQPPENVRALSITSDVAVISWSEPPRSTLNGVLKGYRVIFWSLYVDGEWGEMQNITTTRERV-------ELRGMEKFTNYSVQVLAYTQAGDGVRSSVLYIQTKEDVP 1191 HSP 3 Score: 101.293 bits (251), Expect = 7.960e-20 Identity = 148/618 (23.95%), Postives = 230/618 (37.22%), Query Frame = 0
Query: 362 IAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDD-------RVKQVGGTLIIK-------EAKVDDSGKYLCMVNNSVG---GESVETVLTVTAPLSVEVEPKQQVVDYGRSATFKCHYDGNP---VKSVYWLKNGEPV--GHT-----ETTLRINSVKKEDR-GMYQCFVRNDQESAQATGELKL--GGRF---DP----PEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAPYVRKMLP--MKVVAGKSMFVTCPVAGYPISSVTWEKDGRQLPFNDRQTVYR---NGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVME--PPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWK---KAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIGGISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCV 932
+ V CPA G P RWY L DD R GTL + + + D+ Y C N+ G ++ P +V VE ++ + G A FKC + V V W K+ + H L I+ V+KED Y+C ++ + +GE + G R DP P + F + G V L C A G P P ++W G +D S ++ L IS RT+ GTY C+ ++ G + L V +V + P +K G ++ ++C + G P ++ W ++ +L D R N TL I++ Q K + Y C A D + +E P IV SF + V+N G+ +MC+ A G P P +TW + +V + R N Y D + ++ + I+ G G Y C A N +G A+I V+ PPS R TA+ +T++ C G I W + L N R+ E+G L +++ E L + +
Sbjct: 43 VVVPCPAAGSPSAALRWY----------LATGDDIYDVPHIRHVHANGTLQLYPFSPSAFNSFIHDN-DYFCTAENAAGKIRSPNIRVKAVFREPYTVRVEDQRSM--RGNVAVFKCLIPSSVQEYVSVVSWEKDTVSIIPEHRFFITYHGGLYISDVQKEDALSTYRCITKH-----KYSGETRQSNGARLSVTDPAESIPTILDGFHSQEVWAGHTVELPCTASGYPIPAIRWLKDGRPLPAD---------SRWTKRITGLTISDLRTEDSGTYICEVTNTFGSAEATGILMVIDPLHV-TLTPKKLKTGIGSTVILSCALTGSPEFTIRWYRN-TELVLPDEAISIRGLSNETLLITSAQ-KSHSGAYQCFATRKA--QTAQDFAIIALEDGTPRIVS-SFSEKVVNPGEQFSLMCA---------------------------------AKGAPPPTVTWALDDEPIVRDGSHR--TNQYTMSDGTTISHMNVTG-----PQIRDG--GVYRCTARNLVGSAEYQARINVRGPPSIR-AMRNITAVAGRDTLINCRVIGYPYYSIKWYKDALLLPDNH------RQVVFENGTLKLTDVQKGMDEGEYLCSVL 578 HSP 4 Score: 80.8777 bits (198), Expect = 1.049e-13 Identity = 93/411 (22.63%), Postives = 152/411 (36.98%), Query Frame = 0
Query: 543 VSLKCVAKGDPAPEVKWFI----------YGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGA---PYVRKMLPMKVVAGKSMFVTC----PVAGYPISSVTWEKDGRQLPFNDRQTVYRNGTLAISNVQRKEDASTYTCVARNDEGYSARSD--LTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIGGISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVAT 934
V + C A G P+ ++W++ + ++G LQ+ F+ + + N Y C A + G + S + V PY ++ + + G C V Y +S V+WEKD + R + +G L IS+VQ+++ STY C+ ++ R ++V +P +P I +G +Q + G ++ C A G+P P I W K RP P D R K I G L I +++ + G Y+C+ +N G A + V P + + I +L C G I W N + + D +IR S E T+ I Q+ S + C AT
Sbjct: 43 VVVPCPAAGSPSAALRWYLATGDDIYDVPHIRHVHANGTLQLYPFSPSAFNSFIHDN----------DYFCTAENAAGKI-RSPNIRVKAVFREPYTVRVEDQRSMRGNVAVFKCLIPSSVQEY-VSVVSWEKDTVSIIPEHRFFITYHGGLYISDVQKEDALSTYRCITKHKYSGETRQSNGARLSVTDPAESIP------TILDGFHSQ------------------------EVWAGHTVELPCTASGYPIPAIRWLK------DGRPLPAD--------SRWTKRITG-LTISDLRTEDSGTYICEVTNTFGSAEATGILMVIDPLHVTLTPKKLKTGIGSTVILSCALTGSPEFTIRWYRNTELVLP--DEAISIRGLSNE-----TLLITSAQKSHSGAYQCFAT 389 HSP 5 Score: 62.3882 bits (150), Expect = 4.569e-8 Identity = 45/133 (33.83%), Postives = 61/133 (45.86%), Query Frame = 0
Query: 1264 VTAHTTIGEGSPSIKVTLS---PTNRIPAKIASFDDDFVAMVKQDVKLPCIAVGSPNPQLHWKMRGQPIPKNDRIRQLPDGSLQITRVLKEDTGKYVCMVNNKYGQDMVTHELVVNGPPDPPEVTITSQTTDT 1393
+T H GE S LS P IP + F V V+LPC A G P P + W G+P+P + R + G L I+ + ED+G Y+C V N +G T L+V DP VT+T + T
Sbjct: 199 ITKHKYSGETRQSNGARLSVTDPAESIPTILDGFHSQEV-WAGHTVELPCTASGYPIPAIRWLKDGRPLPADSRWTKRITG-LTISDLRTEDSGTYICEVTNTFGSAEATGILMV---IDPLHVTLTPKKLKT 326
BLAST of down syndrome cell adhesion molecule isoform x1 vs. SwissProt
Match: gi|292630781|sp|Q4VA61.2|DSCL1_MOUSE (RecName: Full=Down syndrome cell adhesion molecule-like protein 1 homolog; Flags: Precursor) HSP 1 Score: 385.571 bits (989), Expect = 6.759e-107 Identity = 362/1361 (26.60%), Postives = 582/1361 (42.76%), Query Frame = 0
Query: 285 YDGKYVVLPSGELQIRNVSPDDGF--KTYKCRTKHRLTGETKLSATAGKLVITEPLASGKPKFSSIVKLSAFQKTQGGNIAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDD---------RVKQV---GGTLI----IKEAKVDDSGKYLCMVNNSVGGESVETVLTVTAPLSVEVEPKQQVVDYGRSATFKCHYDGNPVKSVYWLKNGE--PVGHTET-----TLRINSVKK-EDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCV-AKGDPAPEVKWFIYGSEAESDG--VLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAP-YVRKMLPMKVVAGKSMFVTCPVAGYPISSVTWE--------KDGRQLPFNDRQTVYRNGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIGGISAVAKIAVQAPP---SFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFGSDDTSINL--IIQEKPETPYGLKV--VDKTGR-------TVKLSWQAPYNGNSNLTRYVIEFKPIKGTWA---NDVDHVLVPGDQTMAGVFSLRPATSYHFRVVAQNDIGVSGPSDTVTIETAEEAPSGPPVDIRVAAVDQHTLRMGQGPMSDEVLVHTAEGAPTQPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVYGPSKTWYDPSTRNTKVSTDNEAELTSLKKYTNYTVQVLAFTNGGDGVKSEVLTSTTEQDIPGPPSSVKALAMSEEAILVSWQYPEEPNGKIIQYTVYIKELDRSRDIAPKTNKVNALQMSHQVDNLNKKARYEFWVTAHTTIGEGSPSIKVTLSPTNRIPAKIASFDDDFVAMVKQDVKLPCIAVGSPNPQLHWKMRGQ----PIPKNDRIRQLPDGSLQITRVLKEDTGKYVCMVNNKYGQDMVTHELVVNGPPDPPEVTITSQTTDTITVKLKTSNPEDK--TPVHGYILHYKPEFG-DWNTAQIPFGSDEFTLDSLLCGQRYHLYVTAHNSIGVGPKSTQLTANTKGVEPTVP-EAHRFLEVSAGSVTLHLNAWMDGGCPILYFVVEYKPRHHQDWTLVSNSVKAGGNFVVLDLNPATWYNLRVTAHNNAGFSVAEYEFATLTVTGGTIAPVREIDGSG 1582
Y +VLP + IR +S + K + T+ + TA I L G P+ S S G ++ C A+G P P W ALDD R Q GT I + ++ D G Y C NSVG + + V P S+ V GR C G P S+ W K+ P H + TL++ V+K D G Y C V Q + + + + P + F+ G ++ + CV + GD + W DG ++ ++ + +S L IS K+ G Y C AS+ VS +L V P +V + + GK+ + C V GYP V W+ + +P R + N +L I +V +ED Y C A N G + +TV + PA++ + +G ++ C+ +RG+ P++ RW K D P+ + A+ A+ D +++ +L +K +G+ ++ C A N G + ++ VQ PP EI+ E K + + + W +R D N +++ I+ + DS F N +IN I+ P + Y +++ +K GR T+ AP ++T + + I+ TW ++ + ++ G Q G P ++ + +V ++ +G S+ T++ ++ + V Q R G GP S E+ T E P+QPP V +++S ++WS PP ++ NGV+KGY+V++ + +T EL ++K+TNY+VQVLA+T GDGV+S VL T++D+PGPP+ +KA+ S +++VSW P +PNG I +YT++ S AP + + Q+ +++ +LN+ +Y WV A T+ G G+ S KVT+ P + PAKI SF +DV+LPC +VG P P + W + P+ + +G+L + V ED+G Y C N G D + L+V PPD P +T++ + +IT+ T P D + + G++L Y + +W I F LDSL CG Y + + A NS+G G S + A T G EP+ + H F +++ L+L W +GGCPI V+EY+P+ W V + + +L ATWY LR+ A N+AG +FATL G TI P++ G G
Sbjct: 349 YRNTELVLPGEAISIRGLSNETLLISSAQKSHSGAYQCFATRKAQTAQDFAIIV-LEDGTPRIVS--SFSEKVVNPGEQFSLMCAAKGAPPPTVTW-------------ALDDEPVVRDGSHRTNQYTMSDGTTISHMNVTGPQIRDGGVYRCTARNSVGSAEYQARINVRGPPSIRAMRNITAVA-GRDTLINCRVIGYPYYSIKWYKDALLLPDNHRQVVFENGTLKLTDVQKGMDEGEYLCSVL-IQPQLSISQSVHVAVKV--PPLIQPFEFPPASIGQLLYIPCVVSSGDMPIRITW-------RKDGQVIISGSGVTIESKEFMSSLQISSVSLKHNGNYTCIASNAAATVSRERQLIVRVPPRFVVQPNNQDGIYGKAGVLNCSVDGYPPPKVMWKHAKGSGNPQQYHPVPLTGRIQILPNSSLLIRHVL-EEDIGYYLCQASNGVGTDISKAMFLTV-KIPAMITSHPNTTIAIKGHPKELNCT-ARGERPIII-RWE------------------KGDTVIDPDRVMRYAI-----------------ATKDNGDEVVS-TLKLKPADRGDSVFFSCHAINSYGEDRGLIQLTVQEPPDPPELEIR----------------EVKA-RSMNLRWT---QRFDGN--------------SIITGFDIEYKNKSDSWDFKQSTRNI----SPTINQANIVDLHPASVYSIRMYSFNKIGRSEPSKELTISTEEAAPDGPPMDVTLQPVTSQSIQVTWKAPKKELQNGVIRGYQI--GYRENSPGSNGQYSIV---EMKATGDSEVYTLDNLKKFA-------QYGVVVQAFNRAGTGPSSSEINATTLEDVPSQPPENVRALSITSDVAVISWSEPPRSTLNGVLKGYRVIFWSLYVDGEWGEMQNVTTTRERVELRGMEKFTNYSVQVLAYTQAGDGVRSSVLYIQTKEDVPGPPAGIKAVPSSASSVVVSWLPPTKPNGVIRKYTIFCSS-PGSGQPAPSEYETSPEQLFYRIAHLNRGQQYLLWVAAVTSAGRGNSSEKVTIEPAGKAPAKIISFGGTVTTPWMKDVRLPCNSVGDPAPAVKWTKDSEDSAIPVSLDGHRLIHTNGTLLLRAVKAEDSGYYTCTATNTGGFDTIIVNLLVQVPPDQPRLTVSKTSASSITL---TWIPGDNGGSSIRGFVLQYSVDNSEEWKDVFISSSERSFKLDSLKCGTWYKVKLAAKNSVGSGRISEIIEAKTHGREPSFSKDQHLFTHINSTHARLNLQGWNNGGCPITAIVLEYRPKGTWAWQGV--RANSSTEVFLTELREATWYELRMRACNSAGCGNETAQFATLDYDGSTIPPIKSAQGEG 1586 HSP 2 Score: 374.015 bits (959), Expect = 3.115e-103 Identity = 313/1141 (27.43%), Postives = 483/1141 (42.33%), Query Frame = 0
Query: 230 VVYQPYQQEASNEYVIVGNSALFKCEVPSFVADVVDLVGWIDSEGTSFDRSQHSNYDGKYVVLPSGELQIRNVSPDDGFKTYKCRTKHRLTGETKLSATAGKLVITEPLASGKPKFSSIVKLSAFQKTQ---GGNIAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDDRVKQVGGTLIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVTAPLSVEVEPKQQVVDYGRSATFKCHYDGNPVKSVYWLKNGEPV---------GHTETTLRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAPYVRKMLPMKVVAGKSMFVTCPVAGYPISSVTWEKDGRQLPFNDRQTVYRNGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNI--KIIDGSLIIKNIKKGNEGYYLCKASNGIGGISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDP-RYTIREESQEDGML--STISIKRTQREDSALFTCVATNAFGSD-------DTSINLIIQEKPET-------PYGLKVVDKTGRTVKLSWQAPYNGNS-----NLTRYVIEFKPIKGTWANDVDHV-----LVPGDQTMAGVFSLRPATSY------------------------------HFR---------VVAQNDIGVSGPSDTVTIETAEEAPS-----GPPVDIRVAAVDQHTLRM------GQGPMSDEVLVHTAEGAPTQPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVYGPSKTWYDP--STRNTKVSTDNEA-ELTSLKKYTNYTVQVLAFTNGGDGVKSEVLTSTTEQDIPG-PPSSVKALAMSEEAILVSWQYPEEP--NGKIIQYTVYIKELDRSRDIAPKTNKVNALQMSHQVDNLNKKARYEFWVTAHTTIGEG 1273
V +PY ++ + GN A+FKC +PS V + V +V W + + S + ++ + G L I +V +D TY+C T+H+ +GET+ S A +L +T+P A P L F + G ++ + C A GYPIP RW K + + L A K++ G L I + + +DSG Y+C V N+ G +LTV PL V + PK+ G + C G+P ++ W +N E V G + TL I+S +K G YQCF ++AQ + L P VS+F PG SL C AKG P P V W + DG + + +G +S++N++ + + GG Y C A + VG + A++NV G P +R M + VAG+ + C V GYP S+ W KD LP N RQ V+ NGTL +++VQ+ D Y C S + V V PP I PF F I G + C +S GD P+ ITW+K D Q + + I K SL I ++ + G Y C ASN +S ++ V+ PP F ++ Q + + VL C G P ++W K + +P +Y + +L S++ I+ ED + C A+N G+D I +I P T P L + R + + W+ G++ + RY I K ++ D V L P D+ + FS SY + R ++ DI SD+ + + S VD+ A+V +++RM G+ S E+ + T E AP PP +V + ++SQ+I+VTW +P NGVI+GY++ Y + + S K + D+E L +LKK+ Y V V AF G G S + +TT +D+P PP +V+AL+++ + ++SW P NG + Y V L + N V + ++ + K Y V A+T G+G
Sbjct: 122 VFREPYTVRVEDQRSMRGNVAVFKCLIPSSVQEYVSVVSW-EKDTVSI------TPENRFFITSHGGLYISDVQKEDALSTYRCITQHKYSGETRQSNGA-RLSVTDP-AESIPTI-----LDGFHSQEVWTGHSVELPCAASGYPIPAIRWLK-----DGRPLPADSRWAKRITG-LTISDLRTEDSGTYICEVTNTFGSAEANGILTVIDPLHVTLTPKKLKTGIGSTVILSCALTGSPEFTIRWYRNTELVLPGEAISIRGLSNETLLISSAQKSHSGAYQCFATRKAQTAQDFAIIVLED--GTPRIVSSFSEKVVNPGEQFSLMCAAKGAPPPTVTWALDDEPVVRDGSHRTNQYTMSDGTTISHMNVTGPQIRDGGVYRCTARNSVGSAEYQARINVRGPPSIRAMRNITAVAGRDTLINCRVIGYPYYSIKWYKDALLLPDNHRQVVFENGTLKLTDVQKGMDEGEYLCSVLIQPQLSISQSVHVAVKVPPLIQPFEFPPASI--GQLLYIPCVVSSGDMPI--------------------------------RITWRK-------------DGQVIISGSGVTIESKEFMSSLQISSVSLKHNGNYTCIASNAAATVSRERQLIVRVPPRFVVQPNNQDGIYGKAGVLNCSVDGYPPPKVMW----KHAKGSGNPQQYHPVPLTGRIQILPNSSLLIRHVLEEDIGYYLCQASNGVGTDISKAMFLTVKIPAMITSHPNTTIAIKGHPKELNCTARGERPIIIRWE---KGDTVIDPDRVMRYAIATK-------DNGDEVVSTLKLKPADRGDSVFFSCHAINSYGEDRGLIQLTVQEPPDPPELEIREVKARSMNLRWTQRFDGNSIITGFDIEYKNKSDSWDFKQSTRNISPTINQANIVDLHPASV--YSIRMYSFNKIGRSEPSKELTISTEEAAPDGPPMDVTLQPVTSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEINATTLEDVPSQPPENVRALSITSDVAVISWSEPPRSTLNGVLKGYRVIFWSLYVDGEWGEMQN-VTTTRERVELRGMEKFTNYSVQVLAYTQAGDG 1176 HSP 3 Score: 104.375 bits (259), Expect = 9.792e-21 Identity = 147/617 (23.82%), Postives = 231/617 (37.44%), Query Frame = 0
Query: 362 IAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDD-------RVKQVGGTLII-------KEAKVDDSGKYLCMVNNSVG---GESVETVLTVTAPLSVEVEPKQQVVDYGRSATFKCHYDGNP---VKSVYWLKNGEPVG-------HTETTLRINSVKKEDR-GMYQCFVRNDQESAQATGELKL--GGRF---DP----PEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAPYVRKMLP--MKVVAGKSMFVTCPVAGYPISSVTWEKDGRQLPFNDRQTV--YRNGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVME--PPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWK---KAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIGGISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCV 932
+ V CPA G P RWY L DD R GTL + + + D+ Y C N+ G ++ P +V VE ++ + G A FKC + V V W K+ + + L I+ V+KED Y+C ++ + +GE + G R DP P + F + G V L C A G P P ++W G +D S ++ L IS RT+ GTY C+ ++ G + L V +V + P +K G ++ ++C + G P ++ W ++ + + ++ N TL IS+ Q K + Y C A D + V+E P IV SF + V+N G+ +MC+ A G P P +TW + VV + R N Y D + ++ + I+ G G Y C A N +G A+I V+ PPS R TA+ +T++ C G I W + L N R+ E+G L +++ E L + +
Sbjct: 43 VVVPCPAAGSPSAALRWY----------LATGDDIYDVPHIRHVHANGTLQLFPFSPSAFNSFIHDN-DYFCTAENAAGKIRSPNIRIKAVFREPYTVRVEDQRSM--RGNVAVFKCLIPSSVQEYVSVVSWEKDTVSITPENRFFITSHGGLYISDVQKEDALSTYRCITQH-----KYSGETRQSNGARLSVTDPAESIPTILDGFHSQEVWTGHSVELPCAASGYPIPAIRWLKDGRPLPAD---------SRWAKRITGLTISDLRTEDSGTYICEVTNTFGSAEANGILTVIDPLHV-TLTPKKLKTGIGSTVILSCALTGSPEFTIRWYRNTELVLPGEAISIRGLSNETLLISSAQ-KSHSGAYQCFATRKA--QTAQDFAIIVLEDGTPRIVS-SFSEKVVNPGEQFSLMCA---------------------------------AKGAPPPTVTWALDDEPVVRDGSHR--TNQYTMSDGTTISHMNVTG-----PQIRDG--GVYRCTARNSVGSAEYQARINVRGPPSIR-AMRNITAVAGRDTLINCRVIGYPYYSIKWYKDALLLPDNH------RQVVFENGTLKLTDVQKGMDEGEYLCSVL 578 HSP 4 Score: 80.4925 bits (197), Expect = 1.571e-13 Identity = 93/411 (22.63%), Postives = 154/411 (37.47%), Query Frame = 0
Query: 543 VSLKCVAKGDPAPEVKWFI----------YGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGA---PYVRKMLPMKVVAGKSMFVTC----PVAGYPISSVTWEKDGRQLPFNDRQTVYRNGTLAISNVQRKEDASTYTCVARNDEGYSARSD--LTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIGGISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVAT 934
V + C A G P+ ++W++ + ++G LQ+ F+ + + N Y C A + G + S + + PY ++ + + G C V Y +S V+WEKD + +R + +G L IS+VQ+++ STY C+ ++ R ++V +P +P I +G +Q + WT G ++ C A G+P P I W K RP P D R K I G L I +++ + G Y+C+ +N G A + V P + + I +L C G I W N + + +IR S E T+ I Q+ S + C AT
Sbjct: 43 VVVPCPAAGSPSAALRWYLATGDDIYDVPHIRHVHANGTLQLFPFSPSAFNSFIHDN----------DYFCTAENAAGKI-RSPNIRIKAVFREPYTVRVEDQRSMRGNVAVFKCLIPSSVQEY-VSVVSWEKDTVSITPENRFFITSHGGLYISDVQKEDALSTYRCITQHKYSGETRQSNGARLSVTDPAESIP------TILDGFHSQEV--------------WT----------GHSVELPCAASGYPIPAIRWLK------DGRPLPAD--------SRWAKRITG-LTISDLRTEDSGTYICEVTNTFGSAEANGILTVIDPLHVTLTPKKLKTGIGSTVILSCALTGSPEFTIRWYRNTELVLPG--EAISIRGLSNE-----TLLISSAQKSHSGAYQCFAT 389 HSP 5 Score: 59.6918 bits (143), Expect = 2.809e-7 Identity = 44/133 (33.08%), Postives = 59/133 (44.36%), Query Frame = 0
Query: 1264 VTAHTTIGEGSPSIKVTLS---PTNRIPAKIASFDDDFVAMVKQDVKLPCIAVGSPNPQLHWKMRGQPIPKNDRIRQLPDGSLQITRVLKEDTGKYVCMVNNKYGQDMVTHELVVNGPPDPPEVTITSQTTDT 1393
+T H GE S LS P IP + F V V+LPC A G P P + W G+P+P + R + G L I+ + ED+G Y+C V N +G L V DP VT+T + T
Sbjct: 199 ITQHKYSGETRQSNGARLSVTDPAESIPTILDGFHSQEV-WTGHSVELPCAASGYPIPAIRWLKDGRPLPADSRWAKRITG-LTISDLRTEDSGTYICEVTNTFGSAEANGILTV---IDPLHVTLTPKKLKT 326
BLAST of down syndrome cell adhesion molecule isoform x1 vs. SwissProt
Match: gi|116918|sp|P12960.1|CNTN1_MOUSE (RecName: Full=Contactin-1; AltName: Full=Neural cell surface protein F3; Flags: Precursor) HSP 1 Score: 209.92 bits (533), Expect = 1.061e-53 Identity = 236/972 (24.28%), Postives = 385/972 (39.61%), Query Frame = 0
Query: 355 QKTQGGNIAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDDRVKQVGGTLIIKEA-KVDDSGKYLCMVNNSVGG-ESVETVLTV--TAPLSVEVEPKQQVVDYGRSATFKCH--YDGNPVKSVYWLKNGEPV----------GHTETTLRINSVKKEDRGMYQCFVRNDQESAQATGEL-------KLGGRFDPPEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAP-YVRKMLPMKVVAGKSMFVTCPVAGYPISSVTWEKDGRQLPFNDRQTVYRNGTLAISNVQRKEDASTYTCVARNDEG-YSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQF--AQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIGGISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEAKGEKPIGI--LWNMNNKRLDTNVDPRYTIREESQEDGMLST---ISIKRTQREDSALFTCVATNAFGSDDTSINLIIQEKPETPYGLKVVDKTGRTVKLSWQAPYNGNSNLTRYVIEFKPI-KGTWAN-DVDHVLVPGDQTMAGVFSLRPATSYHFRVVAQNDIGVSGPS-DTVTIETAEEAPSGPPVDIRVAAVDQHTLRMGQGPMSDEVLVHTAEGAPTQPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVYGP--SKTWYDPSTRNTKVSTDNEAELTSLKKYTNYTVQVLAFTNGGDGVKSEVLTSTTEQDIPG-PPSSVKALAMSEEAILVSWQYPEEPNGKIIQYTVYIKELDRSRDIAPKTNKVNALQMSHQVDNLNKKARYEFWVTAHTTIGEGSPSIKVTLSPTNRIP 1288
+++ G +++ C A+ P PV++W NN + +DR VGG L+I K D+G Y C+ +N+ G S E L+ P E P+ +V + G+ C Y S WL N PV T L I +V+ DRG Y CFV + + + + + P + V F + T G V+L+C A G+P P+++W S + S +G V+ NI + + G YEC+A + G H A++ V P +V + +V G ++ C G PI ++ W K+G Y G L + +V E+A Y C+A N G A ++L + L P + + P K+ A+G I+CK PKP+ +W K ++ ++ R + DGSL I NI + + G Y C A N G ++ + + P + + EN +QC A + + + +W+ N +D N + + Q + ML + I+ Q + + +TC A + S +L+++ P P GL++ D +V L+W + +S +++Y I+ K I W + D ++ G+ A L P Y FRVVA N +G PS + I+T AP+ P D+ G G + E + +TW+ G GY V + P + W + N + T + T + V+V AF N GDG S V + QD P P+ V +S I V W++ E KI++ ++ A +V + + S +++NL +Y V A + G G PS V + T + P
Sbjct: 54 EESLEGKVSLNCRARASPFPVYKW-----RMNNGDVDLTNDRYSMVGGNLVINNPDKQKDAGVYYCLASNNYGMVRSTEATLSFGYLDPFPPEERPEVKVKE-GKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVESSDRGNYSCFVSSPSITKSVFSKFIPLIPIPERTTKPYPADIVVQFKDIYTMMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEI------STSGAVLKIFNI---QLEDEGLYECEAENIRGKDKHQARIYVQAFPEWVEHINDTEVDIGSDLYWPCIATGKPIPTIRWLKNGYS---------YHKGELRLYDVTF-ENAGMYQCIAENAYGSIYANAELKILA-----------------------------------LAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGT--------------EWLVNSSRILIWEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITNPTRIILAPINADITVGENATMQCAASFDPALDLTFVWSFNGYVIDFNKEITHI---HYQRNFMLDANGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGLRIEDIRATSVALTWSRGSDNHSPISKYTIQTKTILSDDWKDAKTDPPIIEGNMESAKAVDLIPWMEYEFRVVATNTLGTGEPSIPSNRIKTDGAAPNVAPSDVG-----------GGGGTNRE--------------------------LTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVTNPDTGRYVHKDET-MTPSTAFQVKVKAFNNKGDGPYSLVAVINSAQDAPSEAPTEVGVKVLSSSEISVHWKHVLE---KIVESYQIRYWAGHDKEAAAHRVQVTSQEYSARLENLLPDTQYFIEVGACNSAGCG-PSSDVIETFTRKAP 906 HSP 2 Score: 148.288 bits (373), Expect = 1.818e-34 Identity = 201/906 (22.19%), Postives = 335/906 (36.98%), Query Frame = 0
Query: 358 QGGNIAVTC-PAQGYPIPV-FRWYKFMESNNNKKLVALDDR--VKQVGGTLIIKEAKVDDSGKYLCMVNNSVGGESVETVL----------TVTAPLSVEVEPKQQVVDYGRSATFKCHYDGNPVKSVYWLKNGEPVGHTE------TTLRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAPYVRKMLPMK----VVAGKSMFVTCPVAGYPISSVTWEKDGRQLPFNDRQTVYRNGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEIT--WK-KAVVNNLQMRPTPNDYQDFDASNDRNIKI-IDGSLIIKNIKKGNEGYYLCKASNGIGGISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSAL---------FTCVATNAFGSDDTSI--NLIIQEKPE---TPYGLKVVDKTGRTVKLSWQAP----YNGNSNLTRYVIEFKPIKG------TWANDVDHVLVPGDQTMAGVFSLRPATSYHFRVVAQNDIGVSGPSDTVTIETAEEAPSGPPVDIRVAAVDQHTLRMGQGPMSDEVLVHTAEGAPTQPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVYGPSKTWYDPSTRNTKVSTDNEAELTSLKKYTNYTVQVLAFTNGGDGVKSEVLTSTTEQDIPGPPSSVKALAMSEEAILVSWQY 1211
+G + + C P +P + +RW N + +D R V Q G L I + D G Y C V++ +SV + T P + V+ K G++ T +C GNPV + W K EP+ T L+I +++ ED G+Y+C N + + + + PE+V + G + C+A G P P ++W G ++ G+ L + + G Y+C A + G + +A+L + +M PMK G + + C P +W K L + R ++ +G+L I+N+ R D YTC A N+ G A S T+ + P I+ + P + G +A + C A P ++T W V + T YQ RN + +G L+I+N + + G Y C A + SA A + V+ PP R + I +V ++G N+ + TI + +D I+ A+ F VATN G+ + SI N I + P + T R + ++W AP Y+ +N Y++ FKP G T N V D+TM P+T++ +V A N+ G GP S ++++A+ AP++ P EV + LSS I V W +++ Y++ Y + R S + A L +L T Y ++V A + G G S+V+ + T + P P + + S +++W +
Sbjct: 150 EGKGMVLLCDPPYHFPDDLSYRWLL----NEFPVFITMDKRRFVSQTNGNLYIANVESSDRGNYSCFVSSPSITKSVFSKFIPLIPIPERTTKPYPADIVVQFKDIYTMMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFNIQLEDEGLYECEAENIRGKDKHQARIYVQAF---PEWVEHINDTEVDIGSDLYWPCIATGKPIPTIRWLKNG-------------YSYHKGE----LRLYDVTFENAGMYQCIAENAYGSIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNSSRILIWEDGSLEINNITRN-DGGIYTCFAENNRG-KANSTGTLVITNPTRII----------------------------------LAPINADITVGENATMQCAASFDPALDLTFVWSFNGYVIDFNKEITHIHYQ-------RNFMLDANGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGLRIED--IRATSVALTWSRGSD--------NHSPISKYTIQTKTILSDDWKDAKTDPPIIEGNMESAKAVDLIPWMEYEFRVVATNTLGTGEPSIPSNRIKTDGAAPNVAPSDVGGGGGTNRELTITW-APLSREYHYGNNFG-YIVAFKPFDGEEWKKVTVTNPDTGRYVHKDETMT------PSTAFQVKVKAFNN-------------------------------------KGDGPYSLVAVINSAQDAPSEAPTEVGVKVLSSSEISVHWKH----VLEKIVESYQIRYWAGHDKEAAAHRVQVTSQEYSARLENLLPDTQYFIEVGACNSAGCGPSSDVIETFTRKAPPSQPPRIISSVRSGSRYIITWDH 929 HSP 3 Score: 102.449 bits (254), Expect = 2.394e-20 Identity = 112/436 (25.69%), Postives = 167/436 (38.30%), Query Frame = 0
Query: 288 KYVVLPSGELQIRNVSPDDGFKTYKCRTKHRLTGETKLSATAGKLVITEPLASGKPKFSSIVKLSAFQKTQGGNIAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDDRVKQVGGTLIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVTA-PLSVEVEPKQQVVDYGRSATFKCHYDGNPVKSVYWLKNGEPVGHTETTLRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNV-NGAPYVRKMLPMKVVAGKSMFVTCPVAGYPISSVT--WEKDGRQLPFNDRQT---------VYRNGTLAISNVQRKEDASTYTCVARND-EGYSARSDLTV 709
++V +G L I NV D Y C ++ S + I E P +V+ G N+ + C A G P+P RW K +E + + G L I +++D G Y C N G + + + V A P VE VD G + C G P+ ++ WLKNG + + LR+ V E+ GMYQC N S A ELK+ E + G V ++C K P P+ W S+ V ++G L I+ GG Y C A + G + + L + N + + + G++ + C + P +T W +G + FN T + NG L I N Q K A YTC A+ + SA +DL V
Sbjct: 187 RFVSQTNGNLYIANVESSDR-GNYSCFVSSPSITKSVFSKFIPLIPIPERTTKPYPA-DIVVQFKDIYTMMGQNVTLECFALGNPVPDIRWRKVLEP------MPSTAEISTSGAVLKIFNIQLEDEGLYECEAENIRGKDKHQARIYVQAFPEWVE-HINDTEVDIGSDLYWPCIATGKPIPTIRWLKNG--YSYHKGELRLYDVTFENAGMYQCIAENAYGSIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSW----SKGTEWLVNSSRILIWEDGS----LEINNITRNDGGIYTCFAENNRGKANSTGTLVITNPTRIILAPINADITVGENATMQCAASFDPALDLTFVWSFNGYVIDFNKEITHIHYQRNFMLDANGELLIRNAQLKH-AGRYTCTAQTIVDNSSASADLVV 602
BLAST of down syndrome cell adhesion molecule isoform x1 vs. SwissProt
Match: gi|55976372|sp|Q69Z26.2|CNTN4_MOUSE (RecName: Full=Contactin-4; AltName: Full=Brain-derived immunoglobulin superfamily protein 2; Short=BIG-2; Flags: Precursor) HSP 1 Score: 209.149 bits (531), Expect = 2.203e-53 Identity = 242/961 (25.18%), Postives = 373/961 (38.81%), Query Frame = 0
Query: 362 IAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDDRVKQVGGTLIIKE-AKVDDSGKYLCMVNNSVGG-ESVETVLTVTAPLSVEVEPKQQV-VDYGRSATFKCH---YDGNPVKSVYWLKNGEP--------VGHTETTLRINSVKKEDRGMYQCFVRNDQESAQATGE-----LK---LGGRFDPPEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAP-YVRKMLPMKVVAGKSMFVTCPVAGYPISSVTWEKDGRQLPFNDRQTVYRNGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIGGISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEAKGEKPIGIL--WNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFGSDDTSINLIIQEKPETPYGLKVVDKTGRTVKLSWQAPYNGNSNLTRYVIEFK-PIKGTW-ANDVDHVLVPGDQTMAGVFSLRPATSYHFRVVAQNDIGVSGPSDTVTIETAEEAPSGPPVDIRVAAVDQHTLRMGQGPMSDEVLVHTAEGAPTQPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVYGP--SKTWY---DPSTRNTKVSTDNEAELTSLKKYTNYTVQVLAFTNGGDGVKS-EVLTSTTEQDIPGPPSSVKALAMSEEAILVSWQYPEEPN-GKIIQYTVYIKELDRSRDIAPKTNKVNALQMSHQVDNLNKKARYEFWVTAHTTIGEGSPSIKVTLSPTNRIP 1288
+ ++C +G P P RW + N + +D R V G+L+I K D+G Y C+ NS G S E L + + + V V G+ C + G S W+ N P V L I V+K D G Y C V N + + G L+ + G ++P V + V + G V L+C A G+P P + W A+ + + + NG L I + + G+YEC A + G +L P +V+ + + V +S+F C G P + W K+G L DR + GTL I+ V DA Y CVA N G S + E P F + ++ +V G + I+CK P+P TW+K ++ N+R DG+L I N+ K + G Y C A+N G S+ + V+ P + + + E+ VL C+ + + I+ W N +D + D + R Q+ + I+ Q + + + C+ + + +LI++ P P + + + T T +LSW+ + +S +T YVI+ + P W A + LV G A V L P Y FR VA N IG+ PS P + R T E P PA V S + +TW + P NG GY V + P W S ++ NE S++ ++ + V+V F N G+G S L + E++ PP+S+ A ++S I V W P N G+I Y V D + A K V Q S ++ NL A Y V A+ + G G S T++ T R P
Sbjct: 46 VKLSCEVKGNPKPHIRW----KINGTDVDIGMDFRYSVVDGSLLINNPNKTQDAGTYQCIATNSFGTIVSREAKLQFAYLENFKTRTRSTVSVRRGQGMVLLCGPPPHSGE--LSYAWIFNEYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPAEKGTTVKLECFALGNPVPTILW----RRADGKPIARKARRHKSNG----ILEIPNFQQEDAGSYECVAENSRGKNVAKGQLTFYAQPNWVQIINDIHVAMEESVFWECKANGRPKPTYRWLKNGDPLLTRDRIQI-EQGTLNITIVNL-SDAGMYQCVAENKHGVIFSSAELSVIAESP-----DFSRTLLKRVTLVKV---------------------------GGEVVIECKPKASPRPVYTWRKG--------------REILRENERITISEDGNLRIINVTKSDAGSYTCIATNHFGTASSTGNVIVKDPTKVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWTFNGHLIDFDKDGDHFERVGGQDSA--GDLMIRNIQLKHAGKYVCMVQTSVDKLSVAADLIVRGPPGPPEAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAVNTVPDLVDGKTFTATVVGLNPWVEYEFRTVAANVIGIGEPSR--------------PSEKR----------------------RTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFGYVVAFRPHGKMIWMLTVLASADASRYVFRNE----SVRPFSPFEVKVGVFNNKGEGPFSPTTLVYSAEEEPTKPPASIFARSLSATDIEVFWASPIGKNRGRIQGYEVKYWRHDDKEENAKKIRTVGN-QTSTKITNLKGSALYHLSVKAYNSAGTGPSS--ATVNVTTRKP 899 HSP 2 Score: 147.902 bits (372), Expect = 2.795e-34 Identity = 204/873 (23.37%), Postives = 335/873 (38.37%), Query Frame = 0
Query: 394 DDR--VKQVGGTLIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVTAPLSV-------EVEPKQQV-------VDYGRSATFKCHYDGNPVKSVYWLK-NGEPVGH------TETTLRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDGVLQV--GSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNG-APYVRKMLPMKVV---AGKSMFVTCPVAGYPISSVTWEKDGRQLPFNDRQTVYRNGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVT-----VMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIGGISAVAKIAVQAPP----SFEIKKRTQ-TALIS-------ENTVLQCEAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFG----SDDTSINLIIQEKPE-TPYGLKVVDKTGRTVKLSWQA--PYNGNSNLTRYVIEFKPI-KGTWANDVDHVLVPGDQTMAGVF---SLRPATSYHFRVVAQNDIGVSGPSDTVTIETAEEAPSGPPVDIRVAAVDQHTLRMGQGPMSDEVLVHTAEGAPTQPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVYGPSKTWYDPSTRNTKVSTDNEAELTSLKKYTNYTVQVLAFTNGGDGVKSEVLTSTTEQDIPGPPSSVKALAMSEEAILVSW 1209
D+R V Q G L I + + D G Y C+V N+V V L PL + E EPK +V + G + +C GNPV ++ W + +G+P+ + L I + ++ED G Y+C N + A G+L + P +V + + V +C A G P P +W G + +Q+ G+ N ++ +N+S A G Y+C A +K G++ SA+L+V +P + L +V G + + C P TW K L N+R T+ +G L I NV K DA +YTC+A N G ++ + + VM PP+ + + G+ ++ + C ++ + WT + ID DG D+ + D G L+I+NI+ + G Y+C + +S A + V+ PP + I + T TA +S + + + P + W N D DG T ++ F VA N G S + + PE TP + + + ++W+ N YV+ F+P K W + VL D + VF S+RP + + +V N+ G S T + +AEE P T+PPA + +LS+ I+V W+S P+ G I+GY+V Y + + + V ++T+LK Y + V A+ + G G S + TT + P P S+ I+++W
Sbjct: 167 DNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTVTNHKV---LGPPTPLILRNDGVMGEYEPKIEVQFPETVPAEKGTTVKLECFALGNPVPTILWRRADGKPIARKARRHKSNGILEIPNFQQEDAGSYECVAENSRGKNVAKGQLTF---YAQPNWVQIINDIHVAMEESVFWECKANGRPKPTYRWLKNGDPLLTRDRIQIEQGTLN------ITIVNLSDA-----GMYQCVAENKHGVIFSSAELSVIAESPDFSRTLLKRVTLVKVGGEVVIECKPKASPRPVYTWRKGREILRENERITISEDGNLRIINVT-KSDAGSYTCIATNHFGTASSTGNVIVKDPTKVMVPPSSMDVTVGESIV-------LPCQVTHDHSLDIVFTWTF----------NGHLIDFDKDG-----------------------DHFERVGGQDS-----AGDLMIRNIQLKHAGKYVCMVQTSVDKLSVAADLIVRGPPGPPEAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAVNTVPDL-------------VDGKTFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFGYVVAFRPHGKMIW---MLTVLASADASRY-VFRNESVRPFSPFEVKVGVFNNKGEGPFSPTTLVYSAEEEP-------------------------------------TKPPASIFARSLSATDIEVFWAS-PIGKNRGRIQGYEVKYWRHDDKEENAKKIRTVGNQTSTKITNLKGSALYHLSVKAYNSAGTGPSSATVNVTTRKPPPSQPPGNIIWNSSDSKIILNW 921 HSP 3 Score: 90.5077 bits (223), Expect = 1.086e-16 Identity = 96/374 (25.67%), Postives = 158/374 (42.25%), Query Frame = 0
Query: 358 QGGNIAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDDRVKQVGGTLIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVTA-PLSVEVEPKQQVVDYGRSATFKCHYDGNPVKSVYWLKNGEP------VGHTETTLRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTT--QPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAPYVRKMLP---MKVVAGKSMFVTCPVA-GYPISSV-TWEKDGRQLPFNDRQTVYRN-------GTLAISNVQRKEDASTYTCVARND-EGYSARSDLTV 709
+G + + C A G P+P W + + K +A R + G L I + +D+G Y C+ NS G + LT A P V++ V S ++C +G P + WLKNG+P + + TL I V D GMYQC N ++ EL + + P+F T + G V ++C K P P W + + + S++G+ + +N++++ G+Y C A++ G S + + V V M+P M V G+S+ + C V + + V TW +G + F+ + G L I N+Q K A Y C+ + + S +DL V
Sbjct: 239 KGTTVKLECFALGNPVPTILWRR-----ADGKPIARKARRHKSNGILEIPNFQQEDAGSYECVAENSRGKNVAKGQLTFYAQPNWVQIINDIHVA-MEESVFWECKANGRPKPTYRWLKNGDPLLTRDRIQIEQGTLNITIVNLSDAGMYQCVAENKHGVIFSSAELSVIA--ESPDFSRTLLKRVTLVKVGGEVVIECKPKASPRPVYTWRKGREILRENERITI----SEDGN-LRIINVTKSD---AGSYTCIATNHFGTASSTGNVIVKDPTKV--MVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWTFNGHLIDFDKDGDHFERVGGQDSAGDLMIRNIQLKH-AGKYVCMVQTSVDKLSVAADLIV 593 HSP 4 Score: 62.3882 bits (150), Expect = 4.523e-8 Identity = 58/229 (25.33%), Postives = 91/229 (39.74%), Query Frame = 0
Query: 1341 GSLQITRVLKEDTGKYVCMVNNKYGQDMVTHELVVNGPPDPPEVTITSQTTDTITVKLKTSNPEDKTPVHGYILHYKPEFG-DWNTAQ-IPFGSDEFTLDSLLCGQ----RYHLYVTAHNSIGVG-PKSTQLTANTKGVEPTVPEAHRFLEVSAGSVTLHLNAW------MDGGCPILYFVVEYKPRHHQDWTLVSNSVKAGGNFVVLD--LNPATWYNLRVTAHNNAG 1554
G L I + + GKYVCMV + V +L+V GPP PPE + TDT P++ +P+ Y++ + F W +P D T + + G Y A N IG+G P T+ P V A+ + GS + + W + G Y VV ++P W L + +V + + P + + ++V NN G
Sbjct: 559 GDLMIRNIQLKHAGKYVCMVQTSVDKLSVAADLIVRGPPGPPEAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAVNTVPDLVDGKTFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPAN--VSGGGGSKSELVITWETVPEELQNGRGFGY-VVAFRPHGKMIWMLTVLASADASRYVFRNESVRPFSPFEVKVGVFNNKG 784 HSP 5 Score: 59.3066 bits (142), Expect = 3.323e-7 Identity = 86/372 (23.12%), Postives = 140/372 (37.63%), Query Frame = 0
Query: 202 IPSFV---ADQLEVVSWHGSDGSEIRPGQIHVVYQP-YQQEASNEYVIVGNSALFKCEV-----PSFVADVVDLVGWIDSEGTSFDRSQHSNYDGKYVVLPSGELQIRNVSPDDGFKTYKCRTKHRLTGETKLSATAGKLVITEPLASGKPKFSSIVKLSAFQKTQGGNIAVTCPAQGYPIPVFRWYKFME-SNNNKKLVALDDRVKQVGGTLIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVTAPLSVEVEPKQQVVDYGRSATFKCH--YDGNPVKSVYWLKNG------------EPVGHTETT--LRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTT------QPGP 541
IP+F A E V+ S G + GQ+ QP + Q ++ +V + S ++C+ P++ W+ + R + + + G L I V+ D Y+C +++ + ++A VI E P FS + GG + + C + P PV+ W K E N+++ +D G L I D+G Y C+ N G S + V P V V P V G S C +D + W NG E VG ++ L I +++ + G Y C V+ + +L + G PPE V+ + T +PGP
Sbjct: 282 IPNFQQEDAGSYECVA-ENSRGKNVAKGQLTFYAQPNWVQIINDIHVAMEESVFWECKANGRPKPTY--------RWLKNGDPLLTRDR--------IQIEQGTLNITIVNLSDA-GMYQCVAENK---HGVIFSSAELSVIAE-----SPDFSRTLLKRVTLVKVGGEVVIECKPKASPRPVYTWRKGREILRENERITISED------GNLRIINVTKSDAGSYTCIATNHFGTASSTGNVIVKDPTKVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWTFNGHLIDFDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDKLSVAADLIVRGPPGPPEAVTIDEITDTTAQLSWRPGP 621
BLAST of down syndrome cell adhesion molecule isoform x1 vs. nr
Match: gi|1317167896|ref|XP_023247278.1| (Down syndrome cell adhesion molecule-like protein Dscam2 [Copidosoma floridanum]) HSP 1 Score: 1578.15 bits (4085), Expect = 0.000e+0 Identity = 800/1513 (52.88%), Postives = 1040/1513 (68.74%), Query Frame = 0
Query: 230 VVYQPYQQEASNEYVIVGNSALFKCEVPSFVADVVDLVGWIDSEGTSF----DRSQHSNYDGKYVVLPSGELQIRNVSPDDGFKTYKCRTKHRLTGETKLSATAGKLVITEPLASGKPKFSSIVKLSAFQKTQGGNIAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDDRVKQVGGTLIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVTAPLSVEVEPKQQVVDYGRSATFKCHYDGNPVKSVYWLKNGEPVGHTETTLRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAPYVRKMLPMKVVAGKSMFVTCPVAGYPISSVTWEKDGRQLPFNDRQTVYRNGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPFSF---------------------------------------GKDVINEGDFAQVM--------------CSISR--GDEPL-------LRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIG-GISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFGSDDTSINLIIQEKPETPYGLKVVDKTGRTVKLSWQAPYNGNSNLTRYVIEFKPIKGTWANDVDHVLVPGDQ-TMAGVFSLRPATSYHFRVVAQNDIGVS----------------GPSDTVTIETAEE-----APSGPPVD------------IRVAAVD----------------QHTL-------------------RMGQGPMSDEVLVHTAEGAPTQPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVYGPSKTWYDPSTRNTKVSTDNEAELTSLKKYTNYTVQVLAFTNGGDGVKSEVLTSTTEQDIPGPPSSVKALAMSEEAILVSWQYPEEPNGKIIQYTVYIKELDRSRDIAPKTNKVNALQMSHQVDNLNKKARYEFWVTAHTTIGEGSPSIKVTLSPTNRIPAKIASFDDDFVAMVKQDVKLPCIAVGSPNPQLHWKMRGQPIPKNDRIRQLPDGSLQITRVLKEDTGKYVCMVNNKYGQDMVTHELVVNGPPDPPEVTITSQTTDTITVKLKTSNPEDKTPVHGYILHYKPEFGDWNTAQIPFGSDEFTLDSLLCGQRYHLYVTAHNSIGVGPKSTQLTANTKGVEPTVPEAHRFLEVSAGSVTLHLNAWMDGGCPILYFVVEYKPRHHQDWTLVSNSVKAGGNFVVLDLNPATWYNLRVTAHNNAGFSVAEYEFATLTVTGGTIAPVREID--GSGSSAGDGRNPFEESLMYFLTNVN 1604
VV Q Y + + +YVI GNS + +C VPSFVAD V ++ W +G F D Q +YDGKY+VLPSGEL I++V P+DG+KTY+CRTKHRLTGET+LSAT G+LVITEP+ S +PKF ++ F+ G + + CPAQG+P+P++RWYKF++ ++ V L++RV+QV GTLII EA+V+DSGKYLC+VNNSVGGESVETVLTVTAPLS E+EP+ Q +D+GR ATF C+ GNP+K++ WLK+G+P+GH E LRI SVKK+D+GMYQCFVRNDQESAQA+ ELKLGGRF+PP+ SAF T QPGP V LKC+A G+P PE+ W + G + + QVG + + NGDVVS LNIS T GG Y+C ASSKVG HSA+LNV G P++R M +VAG+++ VTCPVAG+PI S+ WE+D R LP N +Q V+ NGTL I NV+R D +TYTCVARN +GYSAR L V VM PP ++PFS G V++ G+ ++ C++S G + L + PRW +EPTDK FAQGSDA+++CKADGFPKP++TWKKA + TP DY D N+ +I + DG+L+I NI+K NEGYYLC+A NGIG G+SAV I+VQAPP F+IK R QTA E VLQCEA+GEKPIGILWNMNNKRLD D RYTIREE +G+LS +SIKRT+R DSALFTCVATNAFGSDDTSIN+IIQE PE PYGLKV+DK+GR+V+LSW APY+GNS + RY+IE+K KG+W D+D V+VPG Q +AGVF+L+PAT+YH R+VA+N+IG S GP +V ++ ++ + PP D R+A+ D +H L ++G GPM++E HTAEG P QPP + TTL+SQ I+V+WSSPPLA+ANGVI GYK++YGPS++W+D +T++TK+++ +E L LKK+TNY++Q+LAFT+GGDGVKS + TEQD P P+++KAL MS ++ILVSW+ P +PNG I QY VY K + + P + KV Q++H++ L++K RY+FWVTA T IGEG S V L+P+ +PAKIASFDD FVA K+DVKLPC+AVG P P++ WK+RG + DR+RQLP+GSL I V + D G+Y C V N +G D VTH+LVV+ PP P+VT+T+ TT++IT+KL+ +P D P+HGY +HYKPEFGDW T QI + ++TL++L CG RY +YVTA+N+IG+G S L TKG +P +PEA RF+EVS S+TLHL+AW DGGCP+LYFVVE+K +H Q+W VSN+VK GGNFVV+DL+PA+WY+LRVTAHNNAGF+VAEYEFATLT+TG TIAP RE+ G S+GD + + F+ N+N
Sbjct: 134 VVSQYYDTDVNKDYVIRGNSIVIRCVVPSFVADFVTVLSWHTDQGEEFVSHPDGEQ--DYDGKYLVLPSGELHIKDVGPEDGYKTYQCRTKHRLTGETRLSATKGRLVITEPVGSARPKFPTMADSQTFKAMLNGAMTLLCPAQGFPVPMYRWYKFIDGTTRRQPVQLNERVRQVSGTLIILEAQVEDSGKYLCVVNNSVGGESVETVLTVTAPLSAEIEPRSQTIDFGRPATFTCNVKGNPIKTISWLKDGKPLGHEEEVLRIESVKKDDKGMYQCFVRNDQESAQASAELKLGGRFEPPQIRSAFHEETLQPGPSVFLKCIASGNPTPEITWELDGKKLSNTERFQVGQYVTVNGDVVSNLNISSIHTNDGGLYKCIASSKVGSAEHSARLNVYGLPFIRHMDKKAIVAGETLRVTCPVAGHPIESIVWERDTRVLPINRKQKVFPNGTLIIENVERMTDQATYTCVARNAQGYSARGTLEVQVMVPPKLLPFSLGDGPLNSNQVITVPCAVIEGDQPLLLKWTFNGHSISPHSGISVLDLGERGAILSIGSVQASHAGTYTCTVSNPGGKQQLSAELIVNVPPRWILEPTDKAFAQGSDARVECKADGFPKPQVTWKKAAGD------TPGDYTDLKL-NNPDINVEDGTLMINNIQKTNEGYYLCEAVNGIGSGLSAVILISVQAPPHFDIKLRNQTARRGEPAVLQCEAQGEKPIGILWNMNNKRLDPKSDSRYTIREEIMANGVLSDLSIKRTERSDSALFTCVATNAFGSDDTSINMIIQEVPEVPYGLKVLDKSGRSVQLSWAAPYDGNSPIKRYMIEYKISKGSWETDIDRVVVPGSQQNVAGVFNLKPATTYHLRIVAENEIGTSEPSDTVTIITAEEAPSGPPSSVRVDALDQHTLKVSWKPPPRDDWNGEILGYYVGYRLASSDKPYMFETVEFSKEDGKEHHLQIMNLKTYTQYSVVVQAFNKVGSGPMTEERRQHTAEGVPEQPPHDTTCTTLTSQTIRVSWSSPPLAAANGVITGYKIIYGPSESWHDENTKDTKITSSSETILHGLKKFTNYSMQILAFTSGGDGVKSAPIHCQTEQDAPEAPTAIKALVMSADSILVSWRPPSQPNGVISQYIVYTKANNTEQ---PTSQKVPPNQLTHEISGLDEKRRYDFWVTASTNIGEGQLSKIVNLAPSASVPAKIASFDDKFVATYKEDVKLPCLAVGVPAPEVTWKVRGVKLAPTDRLRQLPEGSLFIKEVDRTDAGEYSCYVENTFGHDTVTHQLVVHAPPHSPQVTLTATTTNSITMKLR-PHPNDNAPIHGYTIHYKPEFGDWETVQISSIALKYTLENLWCGSRYQIYVTAYNAIGMGEPSDILNTRTKGSKPIIPEASRFIEVSTKSITLHLHAWSDGGCPMLYFVVEHKKKHQQEWNQVSNNVKPGGNFVVMDLDPASWYHLRVTAHNNAGFAVAEYEFATLTITGSTIAPARELPDVNGGDSSGD------DPMRIFMANLN 1627 HSP 2 Score: 699.123 bits (1803), Expect = 0.000e+0 Identity = 479/1316 (36.40%), Postives = 661/1316 (50.23%), Query Frame = 0
Query: 14 ILLFAQSDTNGPVFIQEPPNQMDFSNTTGTEIICQSRGTPMPQITWVKGDGSIVQDVPGLRKVMANGNLVLPPFRAEDYNQEVHAQTYRCIAENTLGKVQSRDVQVRAVVHQSYDVYVEMEHVIMGNDVLFKCKIPSYVTDLVQVLDWVESHGNSLKTAPNFVVIQPFETDVGKEYVILGNDAL-MKCSIPSFVADQLEVVSWHGSDG-SEIRPGQIHVVYQPYQQEASNEYVIVGNSALFK----------CEVPSFVADVVDLVGWIDSEGTSFDRSQHSNYDGKYVVLPSGELQIRNVSPDDGFKTYKCRTKHRLTGETKLSATAGKLVITEPLASGKPKFSSIVKLSAFQKTQGGNIAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDDRVKQVGGTLIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVTA---PLSVEVEPKQQVVDYGRSATFKCHYDGNPVKSVYWLKNGEPVGHTE---------------TTLRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDG-VLQVGSFNS--DNGDVVSYLNISQARTKYGGTYECQASSKVGLVSH-SAKLNVNGAPYVRKMLPMKVVAG---KSMFVTCPVA---GYPISSVTWEKDGRQLPFNDRQTVY----RNGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIG-GISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFGSDDTSINLIIQEKPETPYGLKVVDKTGRTVKLSWQAPYNGNSNLTRYVIEFKPIKGTWANDVDHVLVPGD-QTMAGVFSLRPATSYHFRVVAQNDIGVSGPSDTVTIETAEEAPSGPPVDIRVAAVDQHTLRMGQGPMSDEVLVHTAEGAPTQPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVYGPSKT----WYDPSTRNTKVSTDNEAELTSLKKYTNYTVQVLAFTNGGDGVKSEVLTSTTEQDIP-GPPSSVKALAMSEEAILVSWQYP--EEPNGKIIQYTVYIKELDRSRDIAPKTNKVNALQMSHQVDNLNKKARYEFWVTAHTTIGEGSPS 1276
+L A+ ++ GP+F++EPPN++DFSN TG I CQ+RG P P I W++ DG+ V DVPGLR+V+ NGNLV PPFRAEDY QEVHAQ Y C+A+N +G + SRDV VRAVV Q YD V ++VI GN ++ +C +PS+V D V VL W G + P+ E D +Y++L + L +K P + + H G + + + +V A ++ + +S FK C F + +ID GT+ + N + V SG L I +D K Y C + + GE+ + L +T PL++ S + G TC +G PI W K + K + ++ V L I+ K DD G Y C V N L + P + ++ + G S KC GNP + W +G+ + +TE + L I+S+ D G+Y+C + SA+ + L + G F+ D G + + C G P + W E D VL + NG ++ N+ R TY C A + G + + ++ V P K+LP + G + +T P A G + W +G + + +V R L+I +VQ A TYTC N G S A+++ ++ PRW +EPTDK FAQGSDA+++CKADGFPKP++TWKKA + TP DY D N+ +I + DG+L+I NI+K NEGYYLC+A NGIG G+SAV I+VQAPP F+IK R QTA E VLQCEA+GEKPIGILWNMNNKRLD D RYTIREE +G+LS +SIKRT+R DSALFTCVATNAFGSDDTSIN+IIQE PE PYGLKV+DK+GR+V+LSW APY+GNS + RY+IE+K KG+W D+D V+VPG Q +AGVF+L+PAT+YH R+VA+N+IG S PSDTVTI TAEEAPSGPP +RV A+DQHTL KV+W PP NG I GY V Y + + ++ + + ++ ++ +LK YT Y+V V AF G G +E T + +P PP ++ + I VSW P NG I Y + + D K K+ + + + L K Y + A T+ G+G S
Sbjct: 26 MLALAEDESMGPIFVKEPPNRIDFSNGTGAVIECQARGNPQPDIIWIRSDGTAVGDVPGLRQVLPNGNLVFPPFRAEDYRQEVHAQVYICLAKNPVGSIHSRDVNVRAVVSQYYDTDVNKDYVIRGNSIVIRCVVPSFVADFVTVLSWHTDQGEEFVSHPD------GEQDYDGKYLVLPSGELHIKDVGPEDGYKTYQCRTKHRLTGETRLSATKGRLVITEPVGSARPKFPTMADSQTFKAMLNGAMTLLCPAQGFPVPMYRWYKFID--GTTRRQPVQLNERVRQV---SGTLIILEAQVEDSGK-YLCVVNNSVGGESVETV----LTVTAPLSAEIEPRSQTIDF-------GRPATFTCNVKGNPIKTISWLK------DGKPLGHEEEV------LRIESVKKDDKGMYQCFVRNDQESAQASAELKLGGRFEPPQIRSAFHEETLQPGPSVFLKCIASGNPTPEITWELDGKKLSNTERFQVGQYVTVNGDVVSNLNISSIHTNDGGLYKCIASSKVGSAEHSARLNVYGL----PFIRHMDKKAIVAGETLRVTCPVAGHPIESIVW-------ERDTRVLPINRKQKVFPNGTLI-IENVE--RMTDQATYTCVARNAQGYSARGTLEVQVMVPP---KLLPFSLGDGPLNSNQVITVPCAVIEGDQPLLLKWTFNGHSISPHSGISVLDLGERGAILSIGSVQASH-AGTYTCTVSNPGGKQQLS---------------------------AELIVNVP--------PRWILEPTDKAFAQGSDARVECKADGFPKPQVTWKKAAGD------TPGDYTDLKL-NNPDINVEDGTLMINNIQKTNEGYYLCEAVNGIGSGLSAVILISVQAPPHFDIKLRNQTARRGEPAVLQCEAQGEKPIGILWNMNNKRLDPKSDSRYTIREEIMANGVLSDLSIKRTERSDSALFTCVATNAFGSDDTSINMIIQEVPEVPYGLKVLDKSGRSVQLSWAAPYDGNSPIKRYMIEYKISKGSWETDIDRVVVPGSQQNVAGVFNLKPATTYHLRIVAENEIGTSEPSDTVTIITAEEAPSGPPSSVRVDALDQHTL-------------------------------------KVSWKPPPRDDWNGEILGYYVGYRLASSDKPYMFETVEFSKEDGKEHHLQIMNLKTYTQYSVVVQAFNKVGSGPMTEERRQHTAEGVPEQPPHDTTCTTLTSQTIRVSWSSPPLAAANGVITGYKIIYGPSESWHDENTKDTKITSSSET-ILHGLKKFTNYSMQILAFTSGGDGVKS 1208
BLAST of down syndrome cell adhesion molecule isoform x1 vs. nr
Match: gi|951557871|ref|XP_014478246.1| (PREDICTED: Down syndrome cell adhesion molecule-like protein Dscam2 [Dinoponera quadriceps]) HSP 1 Score: 1574.68 bits (4076), Expect = 0.000e+0 Identity = 809/1514 (53.43%), Postives = 1019/1514 (67.31%), Query Frame = 0
Query: 230 VVYQPYQQEASNEYVIVGNSALFKCEVPSFVADVVDLVGWIDSEGTSF-DRSQHSNYDGKYVVLPSGELQIRNVSPDDGFKTYKCRTKHRLTGETKLSATAGKLVITEPLASGKPKFSSIVKLSAFQKTQGGNIAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDDRVKQVGGTLIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVTAPLSVEVEPKQQVVDYGRSATFKCHYDGNPVKSVYWLKNGEPVGHTETTLRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAPYVRKMLPMKVVAGKSMFVTCPVAGYPISSVTWEKDGRQLPFNDRQTVYRNGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIV-------PFSFGKDV-----INEGDFAQVMCSISRGDEPLLR-----------------------------------------------------PRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIG-GISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFGSDDTSINLIIQEKPETPYGLKVVDKTGRTVKLSWQAPYNGNSNLTRYVIEFKPIKGTWANDVDHVLVPGDQ-TMAGVFSLRPATSYHFRVVAQNDIGV----------------SGPSDTVTIETAEEAP-----SGPPVD-------------------------IRVAAVD--QHTL-------------------RMGQGPMSDEVLVHTAEGAPTQPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVYGPSKTWYDPSTRNTKVSTDNEAELTSLKKYTNYTVQVLAFTNGGDGVKSEVLTSTTEQDIPGPPSSVKALAMSEEAILVSWQYPEEPNGKIIQYTVYIKELDRSRDIAPKTNKVNALQMSHQVDNLNKKARYEFWVTAHTTIGEGSPSIKVTLSPTNRIPAKIASFDDDFVAMVKQDVKLPCIAVGSPNPQLHWKMRGQPIPKNDRIRQLPDGSLQITRVLKEDTGKYVCMVNNKYGQDMVTHELVVNGPPDPPEVTITSQTTDTITVKLKTSNPEDKTPVHGYILHYKPEFGDWNTAQIPFGSDEFTLDSLLCGQRYHLYVTAHNSIGVGPKSTQLTANTKGVEPTVPEAHRFLEVSAGSVTLHLNAWMDGGCPILYFVVEYKPRHHQDWTLVSNSVKAGGNFVVLDLNPATWYNLRVTAHNNAGFSVAEYEFATLTVTGGTIAPVREIDGSGSSAGDGRNPFEESLMYFLTNVNLVVP 1608
VV QPY E EYVI GNSA+ KC +PS++A+ V + WI +G + DGKY+VLPSGEL IR+V P+DG+KTY+CRTKHRLTGET+LSAT G+LVITEP+ S P F+ KLS + ++++ C AQG+P PV RWYK++E ++ + LDDRV+QV GTLII+EA+V+DSGKYLC+VNNSVGGESVETVLTVTAPL+ E+EP Q +D+GR ATF C GNP+K++ WLK+G+P+G + LRI SVKKED+GMYQCFVRNDQESAQAT ELKLGGRF+PP+ AF T QPGP + LKCVA G+P PE+ W + G + LQVG + + NGDVVS+LNIS GG Y+C A+SKVG HSA+LNV G P++R M +VAG+++ VTCPV GYPI S+ WE+D R LP N +Q V+ NGTL I NV+R D +TYTCVARN +GYSAR L V VM P I P ++G+ V I +GD M S + EP+ R PRW +EPTDK FAQGSDA+++CKADGFPKP++TWK+A + TP DY D SN +I + DG+L I NI+K NEGYYLC+A NGIG G+SAV I+VQAPP FEIK R QTA E VLQCEA+GEKPIGILWNMNNKRLDT DPRYTIREE +G+LS +SIKRT+R DSALFTCVATNAFGSDDTSIN+I+QE PE PYGLKV+DK+GR+V+LSW APY+GNS + RYVIE+K KG+W D+D VLVPG Q +AGV++LRPAT+YH R+VA+N+IG SGP +V +E ++ PP + + +A D +H L ++G GP+S+E HTAEG P QPP + TTL+SQ I+V+W SPPL++ANGVI GYKV+YGPS TWYD +T++TK+++ +E L LKKYTNY++QVLAFT+GGDGVKS + TEQD P P ++KAL MS E+IL+SW+ P +PNG I QYTVY K + + KV Q++H+ L+K+ RYEFWVTA T IGEG S VTL P+ R+PAKIASFDD F A K+DVKLPC+ VG P P++ WK+RG + +DR+RQLP+GSL I V + D G+Y C V N +G D VTH+LVV+ PP P+VT+T+ TT+++T+KL+ +P D P+HGY +HYKPEFGDW TAQI ++TL++L CG RY +YVTA+N IG G S L TKG +P +PEA RF+EVS S+TLHL+AW DGGCP+LYFVVE+K +H Q+W VSN+VK GGNFVVLDL+PA+WY+LRVTAHNNAGF+VAEYEFATLTVTGGTIAP RE+ D E+ + F+ N+NL VP
Sbjct: 138 VVTQPYNPEILTEYVIRGNSAILKCSIPSYIAEFVTVEAWIREDGEVYLPEDPAVGQDGKYLVLPSGELHIRDVGPEDGYKTYQCRTKHRLTGETRLSATKGRLVITEPVGSKAPAFAGDAKLSLLVRRANMDVSMPCNAQGHPAPVSRWYKYIEGTTRRQPIQLDDRVRQVSGTLIIREARVEDSGKYLCIVNNSVGGESVETVLTVTAPLTAEIEPSTQTIDFGRPATFTCTVQGNPIKTISWLKDGKPLGLEDRVLRIESVKKEDKGMYQCFVRNDQESAQATAELKLGGRFEPPQIRQAFAEETLQPGPSMFLKCVASGNPTPEITWELDGKRLSNTDRLQVGQYVTVNGDVVSHLNISSIHNNDGGLYKCIAASKVGSAEHSARLNVYGLPFIRHMDKKAIVAGETLRVTCPVGGYPIESIVWERDTRVLPINRKQKVFPNGTLIIENVERMSDQATYTCVARNAQGYSARGTLEVQVMVAPQIAPFSISDEPANWGEAVSAVCTIVKGDLPIDM-SWALNGEPITRENHGDVSISSTGKRVSLMTIEAVSARHAGEYTCTASNAAGATSYSAILAVNVPPRWILEPTDKAFAQGSDARVECKADGFPKPQVTWKRAAGD------TPGDYTDLKLSNP-DISVEDGTLSINNIQKTNEGYYLCEAVNGIGSGLSAVILISVQAPPQFEIKLRNQTARRGEPAVLQCEAQGEKPIGILWNMNNKRLDTKSDPRYTIREEILANGVLSDLSIKRTERSDSALFTCVATNAFGSDDTSINMIVQEVPEVPYGLKVLDKSGRSVQLSWAAPYDGNSPIKRYVIEYKISKGSWETDIDRVLVPGSQQNVAGVYNLRPATTYHLRIVAENEIGTSDPSDTVTIITAEEVPSGPPTSVRVEAPDQHTLKVIWKAPPREDWNGEIRGYYVGHRQSSDKPYMFETVELAKEDGKEHHLQITNLKTYTQYSVVIQAFNKVGAGPLSEECKQHTAEGVPEQPPHDTTCTTLTSQTIRVSWMSPPLSAANGVITGYKVIYGPSDTWYDENTKDTKITSSSETILHGLKKYTNYSMQVLAFTSGGDGVKSAPIHCQTEQDAPEAPIAIKALVMSAESILISWRPPSQPNGVISQYTVYTKADNAEEST---SQKVPPNQLTHEASGLDKQRRYEFWVTASTNIGEGEASKIVTLGPSVRVPAKIASFDDKFTATYKEDVKLPCLTVGVPAPEVTWKVRGAVLQPSDRLRQLPEGSLFIKEVDRADAGEYSCYVENSFGHDTVTHQLVVHAPPHSPQVTLTATTTNSLTMKLR-PHPTDNAPIHGYTIHYKPEFGDWETAQIGSAIQKYTLENLWCGSRYQIYVTAYNGIGTGDPSDILNTRTKGSKPIIPEAGRFIEVSTNSITLHLSAWSDGGCPMLYFVVEHKKKHQQEWNQVSNNVKPGGNFVVLDLDPASWYHLRVTAHNNAGFAVAEYEFATLTVTGGTIAPARELPDVNGGGND-----EDPMKMFMANLNLFVP 1634 HSP 2 Score: 696.041 bits (1795), Expect = 0.000e+0 Identity = 495/1336 (37.05%), Postives = 668/1336 (50.00%), Query Frame = 0
Query: 15 LLFAQSDTNGPVFIQEPPNQMDFSNTTGTEIICQSRGTPMPQITWVKGDGSIVQDVPGLRKVMANGNLVLPPFRAEDYNQEVHAQTYRCIAENTLGKVQSRDVQVRAVVHQSYDVYVEMEHVIMGNDVLFKCKIPSYVTDLVQVLDWVESHGNSLKTAPNFVVIQPFETDVGKE--YVILGNDALMKCSI-PSFVADQLEVVSWHGSDGSEIR----PGQIHVVYQPYQQEASNEYVIVGNSAL------------FKCEVPSFVADVVDLVGWIDSEGTSFDRSQHSNYDGKYVVLPSGELQIRNVSPDDGFKTYKCRTKHRLTGETKLSATAGKLVITEPLASGKPKFSSIVKLSAFQKTQGGNIAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDDRVKQVGGTLIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVTAPLSVEVEPKQ-------QVVDYGRSATFKCHYDGNPVKSVYWLKNGEPVGHTE---------------TTLRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDG-VLQVGSFNS--DNGDVVSYLNISQARTKYGGTYECQASSKVGLVSH-SAKLNVNGAPYVRKMLPMKVVA-----GKSMFVTCPV--AGYPISSVTWEKDGRQLPFNDRQTVYRNGTLAISNVQRK-----------EDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIG-GISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFGSDDTSINLIIQEKPETPYGLKVVDKTGRTVKLSWQAPYNGNSNLTRYVIEFKPIKGTWANDVDHVLVPGD-QTMAGVFSLRPATSYHFRVVAQNDIGVSGPSDTVTIETAEEAPSGPPVDIRVAAVDQHTLRMGQGPMSDEVLVHTAEGAPTQPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVYGPSKT---WYDPSTRNTKVSTDNEAELTSLKKYTNYTVQVLAFTNGGDGVKSEVLTSTTEQDIP-GPPSSVKALAMSEEAILVSWQYP--EEPNGKIIQYTVYIKELDRSRDIAPKTNKVNALQMSHQVDNLNKKARYEFWVTAHTTIGEGSPSIKV 1279
++ A+ ++ GPVF++EPPN++DFSN TG + CQ+RG P P I WV+ DG+ V DVPGLR+V+ NGNLV PPFRAEDY QEVHAQ Y C+A + G V SRDV VRAVV Q Y+ + E+VI GN + KC IPSY+ + V V W+ G V P + VG++ Y++L + L + P + + H G E R G++ V+ +P +A G++ L C A V +I EGT+ R Q D + V SG L IR +D K Y C + + GE+ + L +T PL + + + G TC QG PI W K + K + L+DRV L I+ K +D G Y C V N ES + T L EP Q + + G S KC GNP + W +G+ + +T+ + L I+S+ D G+Y+C + SA+ + L + G F+ D G + + C G P + W E D VL + NG ++ N+ R TY C A + G + + ++ V AP ++ P + G+++ C + PI ++W +G + T +G ++IS+ ++ A YTC A N G ++ S + + V P PRW +EPTDK FAQGSDA+++CKADGFPKP++TWK+A + TP DY D SN +I + DG+L I NI+K NEGYYLC+A NGIG G+SAV I+VQAPP FEIK R QTA E VLQCEA+GEKPIGILWNMNNKRLDT DPRYTIREE +G+LS +SIKRT+R DSALFTCVATNAFGSDDTSIN+I+QE PE PYGLKV+DK+GR+V+LSW APY+GNS + RYVIE+K KG+W D+D VLVPG Q +AGV++LRPAT+YH R+VA+N+IG S PSDTVTI TAEE PSGPP +RV A DQHTL KV W +PP NG I+GY V + S ++ + ++ ++T+LK YT Y+V + AF G G SE T + +P PP ++ + I VSW P NG I Y V D D K K+ + + + L K Y V A T+ G+G S +
Sbjct: 31 VVAAEDESMGPVFVKEPPNRVDFSNGTGAVVECQARGNPQPDIIWVRADGTAVGDVPGLRQVLPNGNLVFPPFRAEDYRQEVHAQVYSCLARSPAGSVHSRDVNVRAVVTQPYNPEILTEYVIRGNSAILKCSIPSYIAEFVTVEAWIREDGE---------VYLPEDPAVGQDGKYLVLPSGELHIRDVGPEDGYKTYQCRTKHRLTG-ETRLSATKGRL-VITEPVGSKAP---AFAGDAKLSLLVRRANMDVSMPCNAQGHPAPVSRWYKYI--EGTT--RRQPIQLDDR-VRQVSGTLIIREARVEDSGK-YLCIVNNSVGGESVETV----LTVTAPLTAEIEPSTQTIDF-------GRPATFTCTVQGNPIKTISWLK------DGKPLGLEDRV------LRIESVKKEDKGMYQCFVRND--QESAQA--TAELKLGGRFEPPQIRQAFAEETLQPGPSMFLKCVASGNPTPEITWELDGKRLSNTDRLQVGQYVTVNGDVVSHLNISSIHNNDGGLYKCIAASKVGSAEHSARLNVYGL----PFIRHMDKKAIVAGETLRVTCPVGGYPIESIVW-------ERDTRVLPINRKQKVFPNGTLI-IENVE--RMSDQATYTCVARNAQGYSARGTLEVQVMVAP---QIAPFSISDEPANWGEAVSAVCTIVKGDLPI-DMSWALNGEPI------TRENHGDVSISSTGKRVSLMTIEAVSARHAGEYTCTASNAAGATSYSAI-LAVNVP----------------------------------PRWILEPTDKAFAQGSDARVECKADGFPKPQVTWKRAAGD------TPGDYTDLKLSNP-DISVEDGTLSINNIQKTNEGYYLCEAVNGIGSGLSAVILISVQAPPQFEIKLRNQTARRGEPAVLQCEAQGEKPIGILWNMNNKRLDTKSDPRYTIREEILANGVLSDLSIKRTERSDSALFTCVATNAFGSDDTSINMIVQEVPEVPYGLKVLDKSGRSVQLSWAAPYDGNSPIKRYVIEYKISKGSWETDIDRVLVPGSQQNVAGVYNLRPATTYHLRIVAENEIGTSDPSDTVTIITAEEVPSGPPTSVRVEAPDQHTL-------------------------------------KVIWKAPPREDWNGEIRGYYVGHRQSSDKPYMFETVELAKEDGKEHHLQITNLKTYTQYSVVIQAFNKVGAGPLSEECKQHTAEGVPEQPPHDTTCTTLTSQTIRVSWMSPPLSAANGVITGYKVIYGPSDTWYDENTKDTKITSSSET-ILHGLKKYTNYSMQVLAFTSGGDGVKSAPI 1215 HSP 3 Score: 82.8037 bits (203), Expect = 8.704e-12 Identity = 81/242 (33.47%), Postives = 105/242 (43.39%), Query Frame = 0
Query: 1705 YGQMNTNGRMMTMKHDGLPYEEMGYCPPPNRKLPPVPGTHSNYNTIDRIKNGHKTKGAG---AYATYDRRNKGEGPQYDEIPYGDVGLAANGQSGKGQLPQIPDDYSQVPHVPARQVGGSIANGDEDISPYATFHLLGMREENKGGPNPA-NFQTLP-PGAG---------GAQTGPNTPARHLSQTMNPRRS-----IANPGGP------MQPALYDSVNCDYEPGTYQAPQNQNFGNPYD 1921
Y Q G + + L +E+GY PPNRKLPPVPG SNYNT DRIK G G G +++T+D R Y+E+ + G G S +++I PYATFHLLG REE P+ A FQT P PG G G T + +R SQ+M PR++ + + GG P D NC E Y + Q +G PYD
Sbjct: 1666 YQQTGVGGATLDKRRSDL-RDELGYIAPPNRKLPPVPG--SNYNTCDRIKRGTVISGTGSLRSHSTWDPRRH----MYEELSHYAPNRRCPPPPRMGSAD-----------------GLSHRGMEDEICPYATFHLLGFREEMD--PSKAMQFQTFPHPGNGHSGTMGPPVGHPTNASAHSRSGSQSM-PRQNGRYSRVPSQGGGSGTHNVFSPEYDDPANCAPEEDQYGSQYGQ-YGAPYD 1879
BLAST of down syndrome cell adhesion molecule isoform x1 vs. nr
Match: gi|1339078582|ref|XP_023726716.1| (Down syndrome cell adhesion molecule-like protein Dscam2 isoform X20 [Cryptotermes secundus]) HSP 1 Score: 1559.66 bits (4037), Expect = 0.000e+0 Identity = 804/1486 (54.10%), Postives = 1018/1486 (68.51%), Query Frame = 0
Query: 230 VVYQPYQQEASNEYVIVGNSALFKCEVPSFVADVVDLVGWIDSEGTSFDRSQHS-NYDGKYVVLPSGELQIRNVSPDDGFKTYKCRTKHRLTGETKLSATAGKLVITEPLASGKPKFSSIVKLSAFQKTQGGNIA---------VTCPAQGYPIPVFRWYKFMESNNNKKLVALDDRVKQVGGTLIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVTAPLSVEVEPKQQVVDYGRSATFKCHYDGNPVKSVYWLKNGEPVGHTETTLRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAPYVRKMLPMKVVAGKSMFVTCPVAGYPISSVTWEKDGRQLPFNDRQTVYRNGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVM-----------------------------EPPAIVPFSFGK-----------------------DVINEGDFAQVMCSI---------SRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIG-GISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFGSDDTSINLIIQEKPETPYGLKVVDKTGRTVKLSWQAPYNGNSNLTRYVIEFKPIKGTWANDVDHVLVPGDQTMAGVFSLRPATSYHFRVVAQNDIGVS----------------GPSDTVTIETAEE----APSGPP-------------VDIRVAAVD----------------QHTLRMGQ-------------------GPMSDEVLVHTAEGAPTQPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVYGPSKTWYDPSTRNTKVSTDNEAELTSLKKYTNYTVQVLAFTNGGDGVKSEVLTSTTEQDIPGPPSSVKALAMSEEAILVSWQYPEEPNGKIIQYTVYIKELD-RSRDIAPKTNKVNALQMSHQVDNLNKKARYEFWVTAHTTIGEGSPSIKVTLSPTNRIPAKIASFDDDFVAMVKQDVKLPCIAVGSPNPQLHWKMRGQPIPKNDRIRQLPDGSLQITRVLKEDTGKYVCMVNNKYGQDMVTHELVVNGPPDPPEVTITSQTTDTITVKLKTSNPEDKTPVHGYILHYKPEFGDWNTAQIPFGSDEFTLDSLLCGQRYHLYVTAHNSIGVGPKSTQLTANTKGVEPTVPEAHRFLEVSAGSVTLHLNAWMDGGCPILYFVVEYKPRHHQDWTLVSNSVKAGGNFVVLDLNPATWYNLRVTAHNNAGFSVAEYEFATLTVTGGTIAP 1574
VV Q Y EA NEYVI GNSA+ KC++PSFVAD V + W+ +G + S S NYDGKY+VLPSGEL IR+V P+DG+K+Y+CRTKHRLTGET+LSAT G+LVITEP ++ PK S +K +GG I ++C G+P+P+FRWYKF++ K+ V LDDRVKQV GTLIIKEA+V+DSGKYLC+VNNSVGGESVETVLTVTAPL+ +EP Q VD+GR A F C+++GNP+K + WLK+G+ + H ++ LRI SVKKED+GMYQCF+RNDQE+AQA+ ELKLGGRF+PP+ AF T QPGP V LKC+A G+P PE+ W + G + + LQVG + + NGDVVS+LNIS T GG Y+C ASSKVG V H+AKLNV G P++R M +VAG+++ VTCPVAGYPI ++ WE+DGR LP N +Q V+ NGTL I NV+R D +TYTCVARN +GYSAR L V VM +PP + +SF D + G C++ + E + PRW +EPTDK FAQGSDAK++CKADGFP+P++TWK+A + TP DY+D N+ NIK+ DG+L I NI+K NEGYYLC+A NGIG G+SAV I+VQAPP FEIK R QTA E TVLQCEA+GEKPIGI WNMNNKRLD D RYT+REE +G+LS +SIK+T+R DSALFTC ATNAFG DDTSINLIIQE PE PYGL+V+DK+GR+V+LSW APY+GNS + RY+IE+K +GTW D+D VLVPG QT+AGVF+LRPAT+YH R+VA+N+IG S GP V +E ++ PP V ++A+ D +H L++G+ GPMS+E +TAEG P QPP + TTL+SQ I+V+W SPPL +ANG+IKGYKVVYGPS WYD +T++TK+++ +E L LKKYTNY++QVLAFT+GGDGV+S + TEQD+P PS+VKAL MS ++ILVSW+ PE+PNG + QYTVY++E ++D PK KV QMS + L KK RYEFWVTA T IGEG PS V+LSP++R+PAKIASFDD F A K+DVKLPC+AVG P P + WK++G ++DRIRQLP+GSL I V ++D G+Y C V N +G D VTH+LVV+ PP P+V++TS TT++IT+KL+ +P D P+HGY +HYKPEFGDW T Q+ + ++TL++L CG RY +YVT +N IG G S L TKG +P +PEA RF+EVS S+TLHL+AW DGGCP++YFVVE+K + H +W VSN+VK GGNFVVLDL+PA WY+LRVTAHNNAGF+VAEYEFATLTVTGGTIAP
Sbjct: 125 VVAQFYVTEAENEYVIRGNSAVMKCKIPSFVADFVSVESWVADDGQTLTYSTTSDNYDGKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPTSNIAPK-------SPGKKYEGGEIMYSPAGQRVFMSCQVVGFPVPLFRWYKFVDGTMRKQAVTLDDRVKQVSGTLIIKEARVEDSGKYLCVVNNSVGGESVETVLTVTAPLAANIEPTTQTVDFGRPAVFTCNFEGNPIKMISWLKDGKSLSHEDSVLRIESVKKEDKGMYQCFIRNDQENAQASAELKLGGRFEPPQIRQAFKEETLQPGPSVFLKCIALGNPTPEITWELDGKKLSNSDRLQVGQYVTVNGDVVSHLNISSIHTNDGGLYKCIASSKVGSVEHAAKLNVFGLPFIRPMEKKAIVAGETLIVTCPVAGYPIETIVWERDGRVLPINRKQKVFPNGTLIIENVERLSDQATYTCVARNAQGYSARGTLEVQVMVLPRIVPFHFDVPIFAGQATQVTCLVSQGDPPLDISWSFQGTELSSQMGISTVKFDRKASALLIDPASSGHRGNYTCTVRNPAGSVNYTTSLEVHVPPRWILEPTDKAFAQGSDAKVECKADGFPRPQVTWKRAAGD------TPGDYKDLKP-NNPNIKVEDGTLTINNIQKTNEGYYLCEAVNGIGSGLSAVILISVQAPPHFEIKLRNQTARRGEPTVLQCEARGEKPIGIRWNMNNKRLDPKTDTRYTMREEILPNGVLSDLSIKQTERTDSALFTCEATNAFGIDDTSINLIIQEVPEVPYGLRVLDKSGRSVQLSWAAPYDGNSPIKRYLIEYKIARGTWEADIDRVLVPGQQTVAGVFNLRPATTYHLRIVAENEIGTSEPSDTVPIITAEEAPGGPPTAVKVEAEDQHKLKISWKPPERDQWNGEILGYYVGYKLASSDKPYLFETVEFSKEEGKEHHLQVGELKTYTQYSVVVQAFNKVGPGPMSEETRQYTAEGIPEQPPQDTTCTTLTSQTIRVSWVSPPLTAANGIIKGYKVVYGPSDAWYDENTKDTKITSSSETILHGLKKYTNYSMQVLAFTSGGDGVRSAPIHCQTEQDVPEAPSAVKALVMSGDSILVSWKPPEQPNGIVSQYTVYVREDSAEAKDEKPKLTKVPPFQMSFEASELKKKERYEFWVTASTIIGEGQPSKSVSLSPSSRVPAKIASFDDSFSATYKEDVKLPCLAVGIPAPDIQWKVKGVAFQQDDRIRQLPEGSLFIKSVTRQDAGEYSCSVENSFGHDTVTHQLVVHAPPHSPQVSLTSMTTNSITMKLR-PHPTDTAPLHGYTVHYKPEFGDWETVQVSNQAQKYTLENLWCGSRYQVYVTGYNGIGTGDPSDILNTRTKGSKPVIPEAGRFIEVSTNSITLHLSAWSDGGCPMIYFVVEHKKKLHTEWNQVSNNVKPGGNFVVLDLDPANWYHLRVTAHNNAGFAVAEYEFATLTVTGGTIAP 1595 HSP 2 Score: 700.279 bits (1806), Expect = 0.000e+0 Identity = 487/1321 (36.87%), Postives = 665/1321 (50.34%), Query Frame = 0
Query: 19 QSDTNGPVFIQEPPNQMDFSNTTGTEIICQSRGTPMPQITWVKGDGSIVQDVPGLRKVMANGNLVLPPFRAEDYNQEVHAQTYRCIAENTLGKVQSRDVQVRAVVHQSYDVYVEMEHVIMGNDVLFKCKIPSYVTDLVQVLDWVESHGNSL---KTAPN----FVVIQPFET---DVG-----KEYVILGNDALMKCSIPSFVADQLEVVSWHGSDGSEIRPGQIH----VVYQPYQQEASNEYVIVGNSALFKCEVPSFVADVVDLVGWIDSEGTSFDRSQHSNYDGKYVVLPSGELQIRNVSPDDGFKTYKCRTKHRLTGETKLSATAGKLVITEPLASGKPKFSSIVKLSAFQKTQGGNIAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDDRVKQVGGTLIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVTA---PLSVEVEPKQQVVDYGRSATFKCHYDGNPVKSVYWLKNGEPVGHTE---------------TTLRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDG-VLQVGSFNS--DNGDVVSYLNISQARTKYGGTYECQASSKVGLVSH-SAKLNVNGAPYVRKM-LPMKVVAGKSMFVTCPVA-GYPISSVTWEKDGRQLPFNDRQTVYRNGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIG-GISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFGSDDTSINLIIQEKPETPYGLKVVDKTGRTVKLSWQAPYNGNSNLTRYVIEFKPIKGTWANDVDHVLVPGDQTMAGVFSLRPATSYHFRVVAQNDIGVSGPSDTVTIETAEEAPSGPPVDIRVAAVDQHTLRMGQGPMSDEVLVHTAEGAPTQPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVYGPSKT----WYDPSTRNTKVSTDNEAELTSLKKYTNYTVQVLAFTNGGDGVKSEVLTSTTEQDIP-GPPSSVKALAMSEEAILVSWQYP--EEPNGKIIQYTVYIKELDRSRDIAPKTNKVNALQMSHQVDNLNKKARYEFWVTAHTTIGEGSPSIKVTLSPTNRIP 1288
+ DT GPV+I+EPPN++DFSNTTG + C +RG P+P+I WV+ DG+ V DVPGLR+V+ NGNLV PPFRAEDY QEVHAQ Y C+A N++G + SRDV VRAVV Q Y E E+VI GN + KCKIPS+V D V V WV G +L T+ N ++V+ E DVG K Y L + S +L V++ S+ + PG+ + ++Y P G C+V F + ++D GT R Q D + V SG L I+ +D K Y C + + GE+ + L +T PLA+ + V G TC +G PI + W K + K ++ +D V L I+ K +D G Y C + N L + P + K++ + G S KC GNP + W +G+ + +++ + L I+S+ D G+Y+C + S + +L + G F+ + G + + C G P + W E DG VL + NG ++ N+ R TY C A + G + + ++ V P + + + AG++ VTC V+ G P ++W G +L + + IS V+ AS + R + T TV P V ++ +V + PRW +EPTDK FAQGSDAK++CKADGFP+P++TWK+A + TP DY+D N+ NIK+ DG+L I NI+K NEGYYLC+A NGIG G+SAV I+VQAPP FEIK R QTA E TVLQCEA+GEKPIGI WNMNNKRLD D RYT+REE +G+LS +SIK+T+R DSALFTC ATNAFG DDTSINLIIQE PE PYGL+V+DK+GR+V+LSW APY+GNS + RY+IE+K +GTW D+D VLVPG QT+AGVF+LRPAT+YH R+VA+N+IG S PSDTV I TAEEAP GPP ++V A DQH L K++W P NG I GY V Y + + ++ + + ++ ++ LK YT Y+V V AF G G SE T + IP PP ++ + I VSW P NG I Y V D D K K+ + + + L K Y V A T+ G+G S + +P
Sbjct: 22 EDDTAGPVYIREPPNRVDFSNTTGAVVECSARGNPVPEIIWVRSDGTAVGDVPGLRQVLPNGNLVFPPFRAEDYRQEVHAQVYVCLARNSVGTIHSRDVNVRAVVAQFYVTEAENEYVIRGNSAVMKCKIPSFVADFVSVESWVADDGQTLTYSTTSDNYDGKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRLTGETRLSATKGRL-VITEPTSNIAPKSPGKKYEGGEIMYSP-----------AGQRVFMSCQVVGFPVPLFRWYKFVD--GTM--RKQAVTLDDR-VKQVSGTLIIKEARVEDSGK-YLCVVNNSVGGESVETV----LTVTAPLAANIEPTTQTVDF-------GRPAVFTCNFEGNPIKMISWLK------DGKSLSHEDSV------LRIESVKKEDKGMYQCFIRNDQENAQASAELKLGGRFEPPQIRQAFKEETLQPGPSVFLKCIALGNPTPEITWELDGKKLSNSDRLQVGQYVTVNGDVVSHLNISSIHTNDGGLYKCIASSKVGSVEHAAKLNVFGL----PFIRPMEKKAIVAGETLIVTCPVAGYPIETIVW-------ERDGRVLPINRKQKVFPNGTLI-IENVE--RLSDQATYTCVARNAQGYSARGTLEVQVMVLPRIVPFHFDVPIFAGQATQVTCLVSQGDPPLDISWSFQGTEL----------SSQMGISTVKFDRKASALLI---DPASSGHRGNYTCTVRNPAGSVNYTTSLEV-------------------HVPPRWILEPTDKAFAQGSDAKVECKADGFPRPQVTWKRAAGD------TPGDYKDLKP-NNPNIKVEDGTLTINNIQKTNEGYYLCEAVNGIGSGLSAVILISVQAPPHFEIKLRNQTARRGEPTVLQCEARGEKPIGIRWNMNNKRLDPKTDTRYTMREEILPNGVLSDLSIKQTERTDSALFTCEATNAFGIDDTSINLIIQEVPEVPYGLRVLDKSGRSVQLSWAAPYDGNSPIKRYLIEYKIARGTWEADIDRVLVPGQQTVAGVFNLRPATTYHLRIVAENEIGTSEPSDTVPIITAEEAPGGPPTAVKVEAEDQHKL-------------------------------------KISWKPPERDQWNGEILGYYVGYKLASSDKPYLFETVEFSKEEGKEHHLQVGELKTYTQYSVVVQAFNKVGPGPMSEETRQYTAEGIPEQPPQDTTCTTLTSQTIRVSWVSPPLTAANGIIKGYKVVYGPSDAWYDENTKDTKITSSSET-ILHGLKKYTNYSMQVLAFTSGGDGVRSAPIHCQTEQDVP 1210 HSP 3 Score: 124.02 bits (310), Expect = 3.236e-24 Identity = 125/328 (38.11%), Postives = 160/328 (48.78%), Query Frame = 0
Query: 1636 GTIAPPFGKDTKATQAGFPGLPDWLDLDIIVPVVATVIVICVGILVVCVALTRRKHPPPLMHPEEYAQYYGQMNTNGRMMTMKHDGLPYEEMGYCPPPNRKLPPVPGTHSNYNTIDRIKNGHKTKGAGAYATYDRRNKGEGPQYDEIPYGDVGLAANGQSGKGQLPQIPDDYSQVPHVPARQVGGSIANGDEDISPYATFHLLGMREENKGGPNPA-NFQTLPPGAGGAQT-----GPNTPA----------RHLSQTM---NPRRS-IANPGGPMQ----PALYDSVNCDYEPGTYQAPQNQNFGNPYDCPEGMYGGSMVSSVGYSK 1939
GTIAPP + T Q FP +P+WLDL+I+VP+ ATV+VI VG++V+CVAL+RR P + Y N M + D +E+GY PPNRKLPPVPG SNYNT DRIK GH + ++AT+D R+ Y+E+ G+ ++P P V H A +++I PYATFHLLG REE PN A FQT P G +T GP P R SQ+M N R S +AN G P D NC E Y + Q +G PYD G G SVG ++
Sbjct: 1591 GTIAPPEQEHTSVNQY-FPWVPEWLDLNIVVPIGATVVVIIVGVVVICVALSRRSRGPEQTRLRDDVAYNQSAGGNSTMDKRRPD--LRDELGYIAPPNRKLPPVPG--SNYNTCDRIKRGH-SGSFRSHATWDPRHPRH--MYEELSLHPPGIR--------RIPAHPGSDETVYHR---------AGMEDEICPYATFHLLGFREEMD--PNKAMQFQTFPHQNGHERTHSGTIGPMGPGGVAGNGHIHQRSGSQSMPRANGRYSRVANQNGAANFAPGPEYDDPANCAPEEDQYGSQYGQ-YGAPYDH-YGSRGSVSRRSVGSAR 1889
BLAST of down syndrome cell adhesion molecule isoform x1 vs. nr
Match: gi|1339078556|ref|XP_023726702.1| (Down syndrome cell adhesion molecule-like protein Dscam2 isoform X7 [Cryptotermes secundus]) HSP 1 Score: 1558.5 bits (4034), Expect = 0.000e+0 Identity = 810/1488 (54.44%), Postives = 1023/1488 (68.75%), Query Frame = 0
Query: 230 VVYQPYQQEASNEYVIVGNSALFKCEVPSFVADVVDLVGWIDSEGTSFDRSQHS-NYDGKYVVLPSGELQIRNVSPDDGFKTYKCRTKHRLTGETKLSATAGKLVITEPLASGKPKFSSIVKLSAFQKTQGGNIA---------VTCPAQGYPIPVFRWYKFMESNNNKKLVALDDRVKQVGGTLIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVTAPLSVEVEPKQQVVDYGRSATFKCHYDGNPVKSVYWLKNGEPVGHTETTLRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAPYVRKMLPMKVVAGKSMFVTCPVAGYPISSVTWEKDGRQLPFNDRQTVYRNGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTV---------------MEPPAIV-----------PFSF-------------GKDVINEGDFAQVMCSISR-----------------GDEPL-------LRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIG-GISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFGSDDTSINLIIQEKPETPYGLKVVDKTGRTVKLSWQAPYNGNSNLTRYVIEFKPIKGTWANDVDHVLVPGDQTMAGVFSLRPATSYHFRVVAQNDIGVS----------------GPSDTVTIETAEE----APSGPP-------------VDIRVAAVD----------------QHTLRMGQ-------------------GPMSDEVLVHTAEGAPTQPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVYGPSKTWYDPSTRNTKVSTDNEAELTSLKKYTNYTVQVLAFTNGGDGVKSEVLTSTTEQDIPGPPSSVKALAMSEEAILVSWQYPEEPNGKIIQYTVYIKELD-RSRDIAPKTNKVNALQMSHQVDNLNKKARYEFWVTAHTTIGEGSPSIKVTLSPTNRIPAKIASFDDDFVAMVKQDVKLPCIAVGSPNPQLHWKMRGQPIPKNDRIRQLPDGSLQITRVLKEDTGKYVCMVNNKYGQDMVTHELVVNGPPDPPEVTITSQTTDTITVKLKTSNPEDKTPVHGYILHYKPEFGDWNTAQIPFGSDEFTLDSLLCGQRYHLYVTAHNSIGVGPKSTQLTANTKGVEPTVPEAHRFLEVSAGSVTLHLNAWMDGGCPILYFVVEYKPRHHQDWTLVSNSVKAGGNFVVLDLNPATWYNLRVTAHNNAGFSVAEYEFATLTVTGGTIAP 1574
VV Q Y EA NEYVI GNSA+ KC++PSFVAD V + W+ +G + S S NYDGKY+VLPSGEL IR+V P+DG+K+Y+CRTKHRLTGET+LSAT G+LVITEP ++ PK S +K +GG I ++C G+P+P+FRWYKF++ K+ V LDDRVKQV GTLIIKEA+V+DSGKYLC+VNNSVGGESVETVLTVTAPL+ +EP Q VD+GR A F C+++GNP+K + WLK+G+ + H ++ LRI SVKKED+GMYQCF+RNDQE+AQA+ ELKLGGRF+PP+ AF T QPGP V LKC+A G+P PE+ W + G + + LQVG + + NGDVVS+LNIS T GG Y+C ASSKVG V H+AKLNV G P++R M +VAG+++ VTCPVAGYPI ++ WE+DGR LP N +Q V+ NGTL I NV+R D +TYTCVARN +GYSAR L V V M P I+ P S G V+N G+ + V+ SIS G + L + PRW +EPTDK FAQGSDAK++CKADGFP+P++TWK+A + TP DY+D N+ NIK+ DG+L I NI+K NEGYYLC+A NGIG G+SAV I+VQAPP FEIK R QTA E TVLQCEA+GEKPIGI WNMNNKRLD D RYT+REE +G+LS +SIK+T+R DSALFTC ATNAFG DDTSINLIIQE PE PYGL+V+DK+GR+V+LSW APY+GNS + RY+IE+K +GTW D+D VLVPG QT+AGVF+LRPAT+YH R+VA+N+IG S GP V +E ++ PP V ++A+ D +H L++G+ GPMS+E +TAEG P QPP + TTL+SQ I+V+W SPPL +ANG+IKGYKVVYGPS WYD +T++TK+++ +E L LKKYTNY++QVLAFT+GGDGV+S + TEQD+P PS+VKAL MS ++ILVSW+ PE+PNG + QYTVY++E ++D PK KV QMS + L KK RYEFWVTA T IGEG PS V+LSP++R+PAKIASFDD F A K+DVKLPC+AVG P P + WK++G ++DRIRQLP+GSL I V ++D G+Y C V N +G D VTH+LVV+ PP P+V++TS TT++IT+KL+ +P D P+HGY +HYKPEFGDW T Q+ + ++TL++L CG RY +YVT +N IG G S L TKG +P +PEA RF+EVS S+TLHL+AW DGGCP++YFVVE+K + H +W VSN+VK GGNFVVLDL+PA WY+LRVTAHNNAGF+VAEYEFATLTVTGGTIAP
Sbjct: 125 VVAQFYVTEAENEYVIRGNSAVMKCKIPSFVADFVSVESWVADDGQTLTYSTTSDNYDGKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPTSNIAPK-------SPGKKYEGGEIMYSPAGQRVFMSCQVVGFPVPLFRWYKFVDGTMRKQAVTLDDRVKQVSGTLIIKEARVEDSGKYLCVVNNSVGGESVETVLTVTAPLAANIEPTTQTVDFGRPAVFTCNFEGNPIKMISWLKDGKSLSHEDSVLRIESVKKEDKGMYQCFIRNDQENAQASAELKLGGRFEPPQIRQAFKEETLQPGPSVFLKCIALGNPTPEITWELDGKKLSNSDRLQVGQYVTVNGDVVSHLNISSIHTNDGGLYKCIASSKVGSVEHAAKLNVFGLPFIRPMEKKAIVAGETLIVTCPVAGYPIETIVWERDGRVLPINRKQKVFPNGTLIIENVERLSDQATYTCVARNAQGYSARGTLEVQVMVRPALLPFSFGDRPMNPGQIITVPCGVIEGDRPISLHWTFNGKPITPRMGVTVVNLGERS-VILSISSVQAAHAGVYTCTAKNLAGTDHLSAELVVKVPPRWILEPTDKAFAQGSDAKVECKADGFPRPQVTWKRAAGD------TPGDYKDLKP-NNPNIKVEDGTLTINNIQKTNEGYYLCEAVNGIGSGLSAVILISVQAPPHFEIKLRNQTARRGEPTVLQCEARGEKPIGIRWNMNNKRLDPKTDTRYTMREEILPNGVLSDLSIKQTERTDSALFTCEATNAFGIDDTSINLIIQEVPEVPYGLRVLDKSGRSVQLSWAAPYDGNSPIKRYLIEYKIARGTWEADIDRVLVPGQQTVAGVFNLRPATTYHLRIVAENEIGTSEPSDTVPIITAEEAPGGPPTAVKVEAEDQHKLKISWKPPERDQWNGEILGYYVGYKLASSDKPYLFETVEFSKEEGKEHHLQVGELKTYTQYSVVVQAFNKVGPGPMSEETRQYTAEGIPEQPPQDTTCTTLTSQTIRVSWVSPPLTAANGIIKGYKVVYGPSDAWYDENTKDTKITSSSETILHGLKKYTNYSMQVLAFTSGGDGVRSAPIHCQTEQDVPEAPSAVKALVMSGDSILVSWKPPEQPNGIVSQYTVYVREDSAEAKDEKPKLTKVPPFQMSFEASELKKKERYEFWVTASTIIGEGQPSKSVSLSPSSRVPAKIASFDDSFSATYKEDVKLPCLAVGIPAPDIQWKVKGVAFQQDDRIRQLPEGSLFIKSVTRQDAGEYSCSVENSFGHDTVTHQLVVHAPPHSPQVSLTSMTTNSITMKLR-PHPTDTAPLHGYTVHYKPEFGDWETVQVSNQAQKYTLENLWCGSRYQVYVTGYNGIGTGDPSDILNTRTKGSKPVIPEAGRFIEVSTNSITLHLSAWSDGGCPMIYFVVEHKKKLHTEWNQVSNNVKPGGNFVVLDLDPANWYHLRVTAHNNAGFAVAEYEFATLTVTGGTIAP 1596 HSP 2 Score: 696.812 bits (1797), Expect = 0.000e+0 Identity = 495/1332 (37.16%), Postives = 669/1332 (50.23%), Query Frame = 0
Query: 19 QSDTNGPVFIQEPPNQMDFSNTTGTEIICQSRGTPMPQITWVKGDGSIVQDVPGLRKVMANGNLVLPPFRAEDYNQEVHAQTYRCIAENTLGKVQSRDVQVRAVVHQSYDVYVEMEHVIMGNDVLFKCKIPSYVTDLVQVLDWVESHGNSL---KTAPN----FVVIQPFET---DVG-----KEYVILGNDALMKCSIPSFVADQLEVVSWHGSDGSEIRPGQIH----VVYQPYQQEASNEYVIVGNSALFKCEVPSFVADVVDLVGWIDSEGTSFDRSQHSNYDGKYVVLPSGELQIRNVSPDDGFKTYKCRTKHRLTGETKLSATAGKLVITEPLASGKPKFSSIVKLSAFQKTQGGNIAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDDRVKQVGGTLIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVTA---PLSVEVEPKQQVVDYGRSATFKCHYDGNPVKSVYWLKNGEPVGHTE---------------TTLRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDG-VLQVGSFNS--DNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAPYVR-KMLPMK-----VVAGKSMFVTCPV--AGYPISSVTWEKDGRQLPFNDRQTVY------RNGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIG-GISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFGSDDTSINLIIQEKPETPYGLKVVDKTGRTVKLSWQAPYNGNSNLTRYVIEFKPIKGTWANDVDHVLVPGDQTMAGVFSLRPATSYHFRVVAQNDIGVSGPSDTVTIETAEEAPSGPPVDIRVAAVDQHTLRMGQGPMSDEVLVHTAEGAPTQPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVYGPSKT----WYDPSTRNTKVSTDNEAELTSLKKYTNYTVQVLAFTNGGDGVKSEVLTSTTEQDIP-GPPSSVKALAMSEEAILVSWQYP--EEPNGKIIQYTVYIKELDRSRDIAPKTNKVNALQMSHQVDNLNKKARYEFWVTAHTTIGEGSPSIKVTLSPTNRIP 1288
+ DT GPV+I+EPPN++DFSNTTG + C +RG P+P+I WV+ DG+ V DVPGLR+V+ NGNLV PPFRAEDY QEVHAQ Y C+A N++G + SRDV VRAVV Q Y E E+VI GN + KCKIPS+V D V V WV G +L T+ N ++V+ E DVG K Y L + S +L V++ S+ + PG+ + ++Y P G C+V F + ++D GT R Q D + V SG L I+ +D K Y C + + GE+ + L +T PLA+ + V G TC +G PI + W K + K ++ +D V L I+ K +D G Y C + N L + P + K++ + G S KC GNP + W +G+ + +++ + L I+S+ D G+Y+C + S + +L + G F+ + G + + C G P + W E DG VL + NG ++ N+ R TY C A + G +SA+ + VR +LP + G+ + V C V PI S+ W +G+ P R V R+ L+IS+VQ A YTC A+N G S A+++ + PRW +EPTDK FAQGSDAK++CKADGFP+P++TWK+A + TP DY+D N+ NIK+ DG+L I NI+K NEGYYLC+A NGIG G+SAV I+VQAPP FEIK R QTA E TVLQCEA+GEKPIGI WNMNNKRLD D RYT+REE +G+LS +SIK+T+R DSALFTC ATNAFG DDTSINLIIQE PE PYGL+V+DK+GR+V+LSW APY+GNS + RY+IE+K +GTW D+D VLVPG QT+AGVF+LRPAT+YH R+VA+N+IG S PSDTV I TAEEAP GPP ++V A DQH L K++W P NG I GY V Y + + ++ + + ++ ++ LK YT Y+V V AF G G SE T + IP PP ++ + I VSW P NG I Y V D D K K+ + + + L K Y V A T+ G+G S + +P
Sbjct: 22 EDDTAGPVYIREPPNRVDFSNTTGAVVECSARGNPVPEIIWVRSDGTAVGDVPGLRQVLPNGNLVFPPFRAEDYRQEVHAQVYVCLARNSVGTIHSRDVNVRAVVAQFYVTEAENEYVIRGNSAVMKCKIPSFVADFVSVESWVADDGQTLTYSTTSDNYDGKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRLTGETRLSATKGRL-VITEPTSNIAPKSPGKKYEGGEIMYSP-----------AGQRVFMSCQVVGFPVPLFRWYKFVD--GTM--RKQAVTLDDR-VKQVSGTLIIKEARVEDSGK-YLCVVNNSVGGESVETV----LTVTAPLAANIEPTTQTVDF-------GRPAVFTCNFEGNPIKMISWLK------DGKSLSHEDSV------LRIESVKKEDKGMYQCFIRNDQENAQASAELKLGGRFEPPQIRQAFKEETLQPGPSVFLKCIALGNPTPEITWELDGKKLSNSDRLQVGQYVTVNGDVVSHLNISSIHTNDGGLYKCIASSKVGSVEHAAKLNVFGL----PFIRPMEKKAIVAGETLIVTCPVAGYPIETIVW-------ERDGRVLPINRKQKVFPNGTLI-IENVE--RLSDQATYTCVARNAQG---YSARGTLEVQVMVRPALLPFSFGDRPMNPGQIITVPCGVIEGDRPI-SLHWTFNGK--PITPRMGVTVVNLGERSVILSISSVQAAH-AGVYTCTAKNLAGTDHLS---------------------------AELVVKVP--------PRWILEPTDKAFAQGSDAKVECKADGFPRPQVTWKRAAGD------TPGDYKDLKP-NNPNIKVEDGTLTINNIQKTNEGYYLCEAVNGIGSGLSAVILISVQAPPHFEIKLRNQTARRGEPTVLQCEARGEKPIGIRWNMNNKRLDPKTDTRYTMREEILPNGVLSDLSIKQTERTDSALFTCEATNAFGIDDTSINLIIQEVPEVPYGLRVLDKSGRSVQLSWAAPYDGNSPIKRYLIEYKIARGTWEADIDRVLVPGQQTVAGVFNLRPATTYHLRIVAENEIGTSEPSDTVPIITAEEAPGGPPTAVKVEAEDQHKL-------------------------------------KISWKPPERDQWNGEILGYYVGYKLASSDKPYLFETVEFSKEEGKEHHLQVGELKTYTQYSVVVQAFNKVGPGPMSEETRQYTAEGIPEQPPQDTTCTTLTSQTIRVSWVSPPLTAANGIIKGYKVVYGPSDAWYDENTKDTKITSSSET-ILHGLKKYTNYSMQVLAFTSGGDGVRSAPIHCQTEQDVP 1211 HSP 3 Score: 124.02 bits (310), Expect = 3.104e-24 Identity = 125/328 (38.11%), Postives = 160/328 (48.78%), Query Frame = 0
Query: 1636 GTIAPPFGKDTKATQAGFPGLPDWLDLDIIVPVVATVIVICVGILVVCVALTRRKHPPPLMHPEEYAQYYGQMNTNGRMMTMKHDGLPYEEMGYCPPPNRKLPPVPGTHSNYNTIDRIKNGHKTKGAGAYATYDRRNKGEGPQYDEIPYGDVGLAANGQSGKGQLPQIPDDYSQVPHVPARQVGGSIANGDEDISPYATFHLLGMREENKGGPNPA-NFQTLPPGAGGAQT-----GPNTPA----------RHLSQTM---NPRRS-IANPGGPMQ----PALYDSVNCDYEPGTYQAPQNQNFGNPYDCPEGMYGGSMVSSVGYSK 1939
GTIAPP + T Q FP +P+WLDL+I+VP+ ATV+VI VG++V+CVAL+RR P + Y N M + D +E+GY PPNRKLPPVPG SNYNT DRIK GH + ++AT+D R+ Y+E+ G+ ++P P V H A +++I PYATFHLLG REE PN A FQT P G +T GP P R SQ+M N R S +AN G P D NC E Y + Q +G PYD G G SVG ++
Sbjct: 1592 GTIAPPEQEHTSVNQY-FPWVPEWLDLNIVVPIGATVVVIIVGVVVICVALSRRSRGPEQTRLRDDVAYNQSAGGNSTMDKRRPD--LRDELGYIAPPNRKLPPVPG--SNYNTCDRIKRGH-SGSFRSHATWDPRHPRH--MYEELSLHPPGIR--------RIPAHPGSDETVYHR---------AGMEDEICPYATFHLLGFREEMD--PNKAMQFQTFPHQNGHERTHSGTIGPMGPGGVAGNGHIHQRSGSQSMPRANGRYSRVANQNGAANFAPGPEYDDPANCAPEEDQYGSQYGQ-YGAPYDH-YGSRGSVSRRSVGSAR 1890
BLAST of down syndrome cell adhesion molecule isoform x1 vs. nr
Match: gi|1153817636|ref|XP_020284812.1| (Down syndrome cell adhesion molecule-like protein Dscam2 isoform X40 [Pseudomyrmex gracilis]) HSP 1 Score: 1556.58 bits (4029), Expect = 0.000e+0 Identity = 804/1511 (53.21%), Postives = 1015/1511 (67.17%), Query Frame = 0
Query: 230 VVYQPYQQEASNEYVIVGNSALFKCEVPSFVADVVDLVGWIDSEGTSFDRSQHSNYDGKYVVLPSGELQIRNVSPDDGFKTYKCRTKHRLTGETKLSATAGKLVITEPLASGKPKFSSIVKLSAFQKTQGGNIAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDDRVKQVGGTLIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVTAPLSVEVEPKQQVVDYGRSATFKCHYDGNPVKSVYWLKNGEPVGHTETTLRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAPYVRKMLPMKVVAGKSMFVTCPVAGYPISSVTWEKDGRQLPFNDRQTVYRNGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIV-------PFSFGKDV-----------------------INEGDFAQVMCSISRGDEPL---------------------------------LRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIG-GISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFGSDDTSINLIIQEKPETPYGLKVVDKTGRTVKLSWQAPYNGNSNLTRYVIEFKPIKGTWANDVDHVLVPGDQ-TMAGVFSLR-----------------------------------PATSYHFRVVAQNDIGVS-------------------------GPSDTVTIETAEEAPSGPPVDI-------RVAAVDQHTLRMGQGPMSDEVLVHTAEGAPTQPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVYGPSKTWYDPSTRNTKVSTDNEAELTSLKKYTNYTVQVLAFTNGGDGVKSEVLTSTTEQDIPGPPSSVKALAMSEEAILVSWQYPEEPNGKIIQYTVYIKELDRSRDIAPKTNKVNALQMSHQVDNLNKKARYEFWVTAHTTIGEGSPSIKVTLSPTNRIPAKIASFDDDFVAMVKQDVKLPCIAVGSPNPQLHWKMRGQPIPKNDRIRQLPDGSLQITRVLKEDTGKYVCMVNNKYGQDMVTHELVVNGPPDPPEVTITSQTTDTITVKLKTSNPEDKTPVHGYILHYKPEFGDWNTAQIPFGSDEFTLDSLLCGQRYHLYVTAHNSIGVGPKSTQLTANTKGVEPTVPEAHRFLEVSAGSVTLHLNAWMDGGCPILYFVVEYKPRHHQDWTLVSNSVKAGGNFVVLDLNPATWYNLRVTAHNNAGFSVAEYEFATLTVTGGTIAPVREIDGSGSSAGDGRNPFEESLMYFLTNVNLVVP 1608
VV Q Y + + EY I GNSA+ KC VPSFVAD V ++ W +G F ++DGKY+VLPSGEL IR+V P+DG+KTY+CRTKHRLTGET+LSAT G+LVITEP+ KPKFS+I K F+ + + + CPAQ YP+PVF+WYKF+E + ++ V L++RV+QV GTLII+EA+V+DSGKYLC+VNNSVGGESVETVLTVTAPL E+EP Q +D+GR ATF C GNP+K++ WLK+G+P+G + LRI SVKKED+GMYQCFVRNDQESAQAT ELKLGGRF+PP+ AF T QPGP + LKCVA G+P PE+ W + G + LQVG + + NGDVVS+LNIS T GG Y+C A+SKVG HSA+LNV G P++R M +VAG+++ VTCPVAGYPI ++ WE+D R LP N +Q V+ NGTL I NV+R D +TYTCVARN +GYSAR L V VM P I+ P S+G+ V I+ D V+ S +R + L + PRW +EPTDK FAQGSDA+++CKADGFPKP++TWK+A + TP DY D SN +I + DG+L I NI+K NEGYYLC+A NGIG G+SAV I+VQAPP FEIK R QTA E VLQCEA+GEKPIGILWNMNNKRLDT DPRYTIREE +G+LS +SIKRT+R DSALFTCVATNAFGSDDTSIN+I+QE PE PYGLKV+DK+GR+V+LSW APY+GNS + RY IE+K KG+W D+D VLVPG Q +AGV++LR P TS + Q+ + V+ P + T+E ++E P + I + V Q ++G GPMS+E HTAEG P QPP + TTL+SQ I+V+W SPPL++ANGVI GYKV+YGPS TWYD +T++TK+++ +E L LKKYTNY++QVLAFT+GGDGVKS + TEQD P P ++KAL MS E+IL+SW+ P +PNG I QYTVY K D + + P + KV Q++H+ L+K+ +YEFWVTA T IGEG S VTLSP+ R+PAKIASFDD F A K+DVKLPC+ VG P P++ WK+RG + +DR+RQLP+GSL I V + D G+Y C V N +G D VTH+LVV+ PP P+V +TS TT++IT+K + + D P+HGY +HYKPEFGDW T Q +TLD+L CG RY +YVTA+N IG G S L TKG +P +PEA +F+EVS S+TLHLNAW DGGCP+LYFVVE+K +H Q+W VSN+VK GNF+V+DL+PA+WY+LRVTAHNNAGF+VAEYEFATLTVTGGTIAP REI + G+ +P + F+TN+NLVVP
Sbjct: 138 VVAQYYDTDVNKEYAIRGNSAILKCVVPSFVADFVKVLSWHTDQGEEF--VPGDDFDGKYLVLPSGELHIRDVGPEDGYKTYQCRTKHRLTGETRLSATKGRLVITEPVGFAKPKFSTIDKSRTFEIAEDRGLTLQCPAQAYPVPVFKWYKFIEGTSRRQPVQLNERVRQVSGTLIIREARVEDSGKYLCIVNNSVGGESVETVLTVTAPLIAEIEPSVQTIDFGRPATFTCTVQGNPIKTISWLKDGKPLGLEDRVLRIESVKKEDKGMYQCFVRNDQESAQATAELKLGGRFEPPQIRQAFTEETLQPGPSMFLKCVASGNPTPEISWELDGKRLSNTERLQVGQYVTVNGDVVSHLNISSIHTNDGGQYKCIAASKVGSAEHSARLNVFGLPFIRHMDKKAIVAGETLRVTCPVAGYPIDTIVWERDTRVLPINRKQKVFPNGTLIIENVERMSDQATYTCVARNAQGYSARGTLEVQVMVAPQILPFDFGDEPASWGELVSVTCSVAKGDQPIEISWAFNGTPIDTSDSDVVIGSTNRKNSVLTIESVAARHAGDYTCTASNRVGATAHTAHLSVNVPPRWILEPTDKAFAQGSDARVECKADGFPKPQVTWKRAAGD------TPGDYTDLKLSNP-DISVEDGTLSINNIQKTNEGYYLCEAVNGIGSGLSAVILISVQAPPQFEIKLRNQTARRGEPAVLQCEAQGEKPIGILWNMNNKRLDTKSDPRYTIREEILANGVLSDLSIKRTERTDSALFTCVATNAFGSDDTSINMIVQEVPEVPYGLKVLDKSGRSVQLSWAAPYDGNSPIKRYTIEYKISKGSWETDMDKVLVPGSQQNVAGVYNLRPATTYHLRIVAENEIGMSDPSDTVTIITAEEVPSGPPTSVKVDALDQHTLKVTWKPPPREDWNGEILGYYVGYRQFADKPYNFETVEFSKEDPKEHHLQITNLKTYTQYGVVVQAFNKVGSGPMSEERKQHTAEGVPEQPPHDTTCTTLTSQTIRVSWVSPPLSTANGVITGYKVIYGPSDTWYDENTKDTKITSSSETILHGLKKYTNYSMQVLAFTSGGDGVKSAPIHCQTEQDAPEAPIAIKALVMSAESILISWRPPSQPNGVISQYTVYAK-ADNAEE--PTSQKVPPNQLTHEASGLDKQLKYEFWVTASTNIGEGEASKIVTLSPSVRVPAKIASFDDKFTATYKEDVKLPCLTVGVPAPEVTWKVRGATLQPSDRLRQLPEGSLFIKEVDRADAGEYSCYVENSFGHDTVTHQLVVHAPPHSPQVALTSTTTNSITMKFR-PHSNDNAPIHGYTIHYKPEFGDWETHQTSSSVQVYTLDNLWCGSRYQIYVTAYNGIGTGDPSDILNTRTKGSKPVIPEAAKFIEVSTNSITLHLNAWGDGGCPMLYFVVEHKKKHQQEWNQVSNNVKPNGNFIVMDLDPASWYSLRVTAHNNAGFAVAEYEFATLTVTGGTIAPAREIPDVNNGGGNDEDP----IKIFMTNLNLVVP 1631 HSP 2 Score: 709.138 bits (1829), Expect = 0.000e+0 Identity = 507/1326 (38.24%), Postives = 663/1326 (50.00%), Query Frame = 0
Query: 18 AQSDTNGPVFIQEPPNQMDFSNTTGTEIICQSRGTPMPQITWVKGDGSIVQDVPGLRKVMANGNLVLPPFRAEDYNQEVHAQTYRCIAENTLGKVQSRDVQVRAVVHQSYDVYVEMEHVIMGNDVLFKCKIPSYVTDLVQVLDWVESHGNSLKTAPNFVVIQPFETDVGKEYVILGNDALMKCSIPSFVADQLEVVSWHGSDGSEIR----PGQIHVVYQPY--------QQEASNEYVIVGNSAL-FKCEVPSFVADVVDLVGWIDSEGTSFDRSQHSNYDGKYVVLPSGELQIRNVSPDDGFKTYKCRTKHRLTGETKLSATAGKLVITEPL-ASGKPKFSSIVKLSAFQKTQGGNIAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDDRVKQVGGTLIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVTAPLSVEVEPKQ-------QVVDYGRSATFKCHYDGNPVKSVYWLKNGEPVGHTE---------------TTLRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDG-VLQVGSFNS--DNGDVVSYLNISQARTKYGGTYECQASSKVGLVSH-SAKLNVNGAPYVRKMLPMK-----VVAGKSMFVTCPVA--GYPISSVTWEKDGRQLPFNDRQTVY-----RNGTLAISNVQRKEDASTYTCVARNDEGYSARS-DLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIG-GISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFGSDDTSINLIIQEKPETPYGLKVVDKTGRTVKLSWQAPYNGNSNLTRYVIEFKPIKGTWANDVDHVLVPGD-QTMAGVFSLRPATSYHFRVVAQNDIGVSGPSDTVTIETAEEAPSGPPVDIRVAAVDQHTLRMGQGPMSDEVLVHTAEGAPTQPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVYGPSKTWYDPSTRNTKVSTDNE------AELTSLKKYTNYTVQVLAFTNGGDGVKSEVLTSTTEQDIP-GPPSSVKALAMSEEAILVSWQYP--EEPNGKIIQYTVYIKELDRSRDIAPKTNKVNALQMSHQVDNLNKKARYEFWVTAHTTIGEGSPSIKV 1279
A+ ++ GPVF++EPPN++DFSN TG + CQ+RG P P I WV+ DG+ V DVPGLR+V+ NGNLV PPFRAEDY QEVHAQ Y C+A + G V SRDV VRAVV Q YD V E+ I GN + KC +PS+V D V+VL W G +F GK V+ + ++ P + + H G E R G++ V+ +P + S + I + L +C ++ V +I EGTS + N + V SG L IR +D K Y C + + GE+ + L +T PL A +P +I G TC QG PI W K + K + L+DRV L I+ K +D G Y C V N ES + T L EP Q + + G S KC GNP + W +G+ + +TE + L I+S+ D G Y+C + SA+ + L + G F+ D G + + C G P + W E D VL + NG ++ N+ R TY C A + G + + ++ V AP ++LP G+ + VTC VA PI ++W +G + +D V +N L I +V + A YTC A N G +A + L+V V PRW +EPTDK FAQGSDA+++CKADGFPKP++TWK+A + TP DY D SN +I + DG+L I NI+K NEGYYLC+A NGIG G+SAV I+VQAPP FEIK R QTA E VLQCEA+GEKPIGILWNMNNKRLDT DPRYTIREE +G+LS +SIKRT+R DSALFTCVATNAFGSDDTSIN+I+QE PE PYGLKV+DK+GR+V+LSW APY+GNS + RY IE+K KG+W D+D VLVPG Q +AGV++LRPAT+YH R+VA+N+IG+S PSDTVTI TAEE PSGPP ++V A+DQHTL KVTW PP NG I GY V Y + + D V E ++T+LK YT Y V V AF G G SE T + +P PP ++ + I VSW P NG I Y V D D K K+ + + + L K Y V A T+ G+G S +
Sbjct: 34 AEDESMGPVFVKEPPNRVDFSNGTGAVVECQARGNPQPDIIWVRADGTAVGDVPGLRQVLPNGNLVFPPFRAEDYRQEVHAQVYSCLARSPAGSVHSRDVNVRAVVAQYYDTDVNKEYAIRGNSAILKCVVPSFVADFVKVLSWHTDQGEEFVPGDDF---------DGKYLVLPSGELHIRDVGPEDGYKTYQCRTKHRLTG-ETRLSATKGRL-VITEPVGFAKPKFSTIDKSRTFEIAEDRGLTLQCPAQAYPVPVFKWYKFI--EGTSRRQPVQLNERVRQV---SGTLIIREARVEDSGK-YLCIVNNSVGGESVETV----LTVTAPLIAEIEPSVQTI--------DFGRPATFTCTVQGNPIKTISWLK------DGKPLGLEDRV------LRIESVKKEDKGMYQCFVRND--QESAQA--TAELKLGGRFEPPQIRQAFTEETLQPGPSMFLKCVASGNPTPEISWELDGKRLSNTERLQVGQYVTVNGDVVSHLNISSIHTNDGGQYKCIAASKVGSAEHSARLNVFGL----PFIRHMDKKAIVAGETLRVTCPVAGYPIDTIVW-------ERDTRVLPINRKQKVFPNGTLI-IENVE--RMSDQATYTCVARNAQGYSARGTLEVQVMVAP---QILPFDFGDEPASWGELVSVTCSVAKGDQPI-EISWAFNGTPIDTSDSDVVIGSTNRKNSVLTIESVAARH-AGDYTCTASNRVGATAHTAHLSVNVP------------------------------------PRWILEPTDKAFAQGSDARVECKADGFPKPQVTWKRAAGD------TPGDYTDLKLSNP-DISVEDGTLSINNIQKTNEGYYLCEAVNGIGSGLSAVILISVQAPPQFEIKLRNQTARRGEPAVLQCEAQGEKPIGILWNMNNKRLDTKSDPRYTIREEILANGVLSDLSIKRTERTDSALFTCVATNAFGSDDTSINMIVQEVPEVPYGLKVLDKSGRSVQLSWAAPYDGNSPIKRYTIEYKISKGSWETDMDKVLVPGSQQNVAGVYNLRPATTYHLRIVAENEIGMSDPSDTVTIITAEEVPSGPPTSVKVDALDQHTL-------------------------------------KVTWKPPPREDWNGEILGYYVGY---RQFADKPYNFETVEFSKEDPKEHHLQITNLKTYTQYGVVVQAFNKVGSGPMSEERKQHTAEGVPEQPPHDTTCTTLTSQTIRVSWVSPPLSTANGVITGYKVIYGPSDTWYDENTKDTKITSSSET-ILHGLKKYTNYSMQVLAFTSGGDGVKSAPI 1211 HSP 3 Score: 80.8777 bits (198), Expect = 3.604e-11 Identity = 80/239 (33.47%), Postives = 104/239 (43.51%), Query Frame = 0
Query: 1705 YGQMNTNGRMMTMKHDGLPYEEMGYCPPPNRKLPPVPGTHSNYNTIDRIKNGHKTKGAGAYATYDRRNKGEGPQYDEIPYGDVGLAANGQSGKGQLPQIPDDYSQVPHVPARQVGGSIANGDEDISPYATFHLLGMREENKGGPNPA-NFQTLP-PGAG---------GAQTGPNTPARHLSQTMNPRRS-----IANPGGP------MQPALYDSVNCDYEPGTYQAPQNQNFGNPYD 1921
Y Q G + + L +E+GY PPNRKLPPVPG SNYNT DRIK G T +++T+D R Y+E+ + G G S +++I PYATFHLLG REE P+ A FQT P PG G G T + +R SQ+M PR++ + + GG P D NC E Y + Q +G PYD
Sbjct: 1663 YQQTGVGGATLDKRRSDL-RDELGYIAPPNRKLPPVPG--SNYNTCDRIKRG-GTGSLRSHSTWDPRRH----MYEELSHYAPNRRCPPPPRMGSTD-----------------GLSHRGMEDEICPYATFHLLGFREEMD--PSKAMQFQTFPHPGNGHSGTMGPPVGHPTNASAHSRSGSQSM-PRQNGRYSRVPSQGGGSGTHNVFSPEYDDPANCAPEEDQYGSQYGQ-YGAPYD 1872
BLAST of down syndrome cell adhesion molecule isoform x1 vs. nr
Match: gi|1339078562|ref|XP_023726706.1| (Down syndrome cell adhesion molecule-like protein Dscam2 isoform X10 [Cryptotermes secundus]) HSP 1 Score: 1541.94 bits (3991), Expect = 0.000e+0 Identity = 797/1486 (53.63%), Postives = 1016/1486 (68.37%), Query Frame = 0
Query: 230 VVYQPYQQEASNEYVIVGNSALFKCEVPSFVADVVDLVGWIDSEGTSFDRSQHS-NYDGKYVVLPSGELQIRNVSPDDGFKTYKCRTKHRLTGETKLSATAGKLVITEPLASGKPKFSSIVKLSAFQKTQGGNIA---------VTCPAQGYPIPVFRWYKFMESNNNKKLVALDDRVKQVGGTLIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVTAPLSVEVEPKQQVVDYGRSATFKCHYDGNPVKSVYWLKNGEPVGHTETTLRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAPYVRKMLPMKVVAGKSMFVTCPVAGYPISSVTWEKDGRQLPFNDRQTVYRNGTLAISNVQRKEDASTYTCVARNDE-----------------------------GYSARSDLTVTVMEPPAIVPFSF----------------GK-------DVINEGDFAQVMCSI---------SRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIG-GISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFGSDDTSINLIIQEKPETPYGLKVVDKTGRTVKLSWQAPYNGNSNLTRYVIEFKPIKGTWANDVDHVLVPGDQTMAGVFSLRPATSYHFRVVAQNDIGVS----------------GPSDTVTIETAEE----APSGPP-------------VDIRVAAVD----------------QHTLRMGQ-------------------GPMSDEVLVHTAEGAPTQPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVYGPSKTWYDPSTRNTKVSTDNEAELTSLKKYTNYTVQVLAFTNGGDGVKSEVLTSTTEQDIPGPPSSVKALAMSEEAILVSWQYPEEPNGKIIQYTVYIKELD-RSRDIAPKTNKVNALQMSHQVDNLNKKARYEFWVTAHTTIGEGSPSIKVTLSPTNRIPAKIASFDDDFVAMVKQDVKLPCIAVGSPNPQLHWKMRGQPIPKNDRIRQLPDGSLQITRVLKEDTGKYVCMVNNKYGQDMVTHELVVNGPPDPPEVTITSQTTDTITVKLKTSNPEDKTPVHGYILHYKPEFGDWNTAQIPFGSDEFTLDSLLCGQRYHLYVTAHNSIGVGPKSTQLTANTKGVEPTVPEAHRFLEVSAGSVTLHLNAWMDGGCPILYFVVEYKPRHHQDWTLVSNSVKAGGNFVVLDLNPATWYNLRVTAHNNAGFSVAEYEFATLTVTGGTIAP 1574
VV Q Y EA NEYVI GNSA+ KC++PSFVAD V + W+ +G + S S NYDGKY+VLPSGEL IR+V P+DG+K+Y+CRTKHRLTGET+LSAT G+LVITEP ++ PK S +K +GG I ++C G+P+P+FRWYKF++ K+ V LDDRVKQV GTLIIKEA+V+DSGKYLC+VNNSVGGESVETVLTVTAPL+ +EP Q VD+GR A F C+++GNP+K + WLK+G+ + H ++ LRI SVKKED+GMYQCF+RNDQE+AQA+ ELKLGGRF+PP+ AF T QPGP V LKC+A G+P PE+ W + G + + LQVG + + NGDVVS+LNIS T GG Y+C ASSKVG V H+AKLNV G P++R M +VAG+++ VTCPVAGYPI ++ WE+DGR LP N +Q V+ NGTL I NV+R D +TYTCVARN + G + + V+ +PP + +SF G+ D + G C++ + + + PRW +EPTDK FAQGSDAK++CKADGFP+P++TWK+A + TP DY+D N+ NIK+ DG+L I NI+K NEGYYLC+A NGIG G+SAV I+VQAPP FEIK R QTA E TVLQCEA+GEKPIGI WNMNNKRLD D RYT+REE +G+LS +SIK+T+R DSALFTC ATNAFG DDTSINLIIQE PE PYGL+V+DK+GR+V+LSW APY+GNS + RY+IE+K +GTW D+D VLVPG QT+AGVF+LRPAT+YH R+VA+N+IG S GP V +E ++ PP V ++A+ D +H L++G+ GPMS+E +TAEG P QPP + TTL+SQ I+V+W SPPL +ANG+IKGYKVVYGPS WYD +T++TK+++ +E L LKKYTNY++QVLAFT+GGDGV+S + TEQD+P PS+VKAL MS ++ILVSW+ PE+PNG + QYTVY++E ++D PK KV QMS + L KK RYEFWVTA T IGEG PS V+LSP++R+PAKIASFDD F A K+DVKLPC+AVG P P + WK++G ++DRIRQLP+GSL I V ++D G+Y C V N +G D VTH+LVV+ PP P+V++TS TT++IT+KL+ +P D P+HGY +HYKPEFGDW T Q+ + ++TL++L CG RY +YVT +N IG G S L TKG +P +PEA RF+EVS S+TLHL+AW DGGCP++YFVVE+K + H +W VSN+VK GGNFVVLDL+PA WY+LRVTAHNNAGF+VAEYEFATLTVTGGTIAP
Sbjct: 125 VVAQFYVTEAENEYVIRGNSAVMKCKIPSFVADFVSVESWVADDGQTLTYSTTSDNYDGKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPTSNIAPK-------SPGKKYEGGEIMYSPAGQRVFMSCQVVGFPVPLFRWYKFVDGTMRKQAVTLDDRVKQVSGTLIIKEARVEDSGKYLCVVNNSVGGESVETVLTVTAPLAANIEPTTQTVDFGRPAVFTCNFEGNPIKMISWLKDGKSLSHEDSVLRIESVKKEDKGMYQCFIRNDQENAQASAELKLGGRFEPPQIRQAFKEETLQPGPSVFLKCIALGNPTPEITWELDGKKLSNSDRLQVGQYVTVNGDVVSHLNISSIHTNDGGLYKCIASSKVGSVEHAAKLNVFGLPFIRPMEKKAIVAGETLIVTCPVAGYPIETIVWERDGRVLPINRKQKVFPNGTLIIENVERLSDQATYTCVARNAQGYSARGTLEVQVMVLPRIVPFHFDVPIFAGQATQVTCLVSEGDPPLDITWSFQGTELSSQMGISTAKFGRKTSVLVIDPASSGHRGNYTCTVRNPAGYVNYTASLDVHVPPRWILEPTDKAFAQGSDAKVECKADGFPRPQVTWKRAAGD------TPGDYKDLKP-NNPNIKVEDGTLTINNIQKTNEGYYLCEAVNGIGSGLSAVILISVQAPPHFEIKLRNQTARRGEPTVLQCEARGEKPIGIRWNMNNKRLDPKTDTRYTMREEILPNGVLSDLSIKQTERTDSALFTCEATNAFGIDDTSINLIIQEVPEVPYGLRVLDKSGRSVQLSWAAPYDGNSPIKRYLIEYKIARGTWEADIDRVLVPGQQTVAGVFNLRPATTYHLRIVAENEIGTSEPSDTVPIITAEEAPGGPPTAVKVEAEDQHKLKISWKPPERDQWNGEILGYYVGYKLASSDKPYLFETVEFSKEEGKEHHLQVGELKTYTQYSVVVQAFNKVGPGPMSEETRQYTAEGIPEQPPQDTTCTTLTSQTIRVSWVSPPLTAANGIIKGYKVVYGPSDAWYDENTKDTKITSSSETILHGLKKYTNYSMQVLAFTSGGDGVRSAPIHCQTEQDVPEAPSAVKALVMSGDSILVSWKPPEQPNGIVSQYTVYVREDSAEAKDEKPKLTKVPPFQMSFEASELKKKERYEFWVTASTIIGEGQPSKSVSLSPSSRVPAKIASFDDSFSATYKEDVKLPCLAVGIPAPDIQWKVKGVAFQQDDRIRQLPEGSLFIKSVTRQDAGEYSCSVENSFGHDTVTHQLVVHAPPHSPQVSLTSMTTNSITMKLR-PHPTDTAPLHGYTVHYKPEFGDWETVQVSNQAQKYTLENLWCGSRYQVYVTGYNGIGTGDPSDILNTRTKGSKPVIPEAGRFIEVSTNSITLHLSAWSDGGCPMIYFVVEHKKKLHTEWNQVSNNVKPGGNFVVLDLDPANWYHLRVTAHNNAGFAVAEYEFATLTVTGGTIAP 1595 HSP 2 Score: 699.508 bits (1804), Expect = 0.000e+0 Identity = 487/1321 (36.87%), Postives = 663/1321 (50.19%), Query Frame = 0
Query: 19 QSDTNGPVFIQEPPNQMDFSNTTGTEIICQSRGTPMPQITWVKGDGSIVQDVPGLRKVMANGNLVLPPFRAEDYNQEVHAQTYRCIAENTLGKVQSRDVQVRAVVHQSYDVYVEMEHVIMGNDVLFKCKIPSYVTDLVQVLDWVESHGNSL---KTAPN----FVVIQPFET---DVG-----KEYVILGNDALMKCSIPSFVADQLEVVSWHGSDGSEIRPGQIH----VVYQPYQQEASNEYVIVGNSALFKCEVPSFVADVVDLVGWIDSEGTSFDRSQHSNYDGKYVVLPSGELQIRNVSPDDGFKTYKCRTKHRLTGETKLSATAGKLVITEPLASGKPKFSSIVKLSAFQKTQGGNIAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDDRVKQVGGTLIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVTA---PLSVEVEPKQQVVDYGRSATFKCHYDGNPVKSVYWLKNGEPVGHTE---------------TTLRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDG-VLQVGSFNS--DNGDVVSYLNISQARTKYGGTYECQASSKVGLVSH-SAKLNVNGAPYVRKM-LPMKVVAGKSMFVTCPVA-GYPISSVTWEKDGRQLPFNDRQTVYRNGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIG-GISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFGSDDTSINLIIQEKPETPYGLKVVDKTGRTVKLSWQAPYNGNSNLTRYVIEFKPIKGTWANDVDHVLVPGDQTMAGVFSLRPATSYHFRVVAQNDIGVSGPSDTVTIETAEEAPSGPPVDIRVAAVDQHTLRMGQGPMSDEVLVHTAEGAPTQPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVYGPSKT----WYDPSTRNTKVSTDNEAELTSLKKYTNYTVQVLAFTNGGDGVKSEVLTSTTEQDIP-GPPSSVKALAMSEEAILVSWQYP--EEPNGKIIQYTVYIKELDRSRDIAPKTNKVNALQMSHQVDNLNKKARYEFWVTAHTTIGEGSPSIKVTLSPTNRIP 1288
+ DT GPV+I+EPPN++DFSNTTG + C +RG P+P+I WV+ DG+ V DVPGLR+V+ NGNLV PPFRAEDY QEVHAQ Y C+A N++G + SRDV VRAVV Q Y E E+VI GN + KCKIPS+V D V V WV G +L T+ N ++V+ E DVG K Y L + S +L V++ S+ + PG+ + ++Y P G C+V F + ++D GT R Q D + V SG L I+ +D K Y C + + GE+ + L +T PLA+ + V G TC +G PI + W K + K ++ +D V L I+ K +D G Y C + N L + P + K++ + G S KC GNP + W +G+ + +++ + L I+S+ D G+Y+C + S + +L + G F+ + G + + C G P + W E DG VL + NG ++ N+ R TY C A + G + + ++ V P + + + AG++ VTC V+ G P +TW G +L + + IS + S + R + T TV P V ++ DV + PRW +EPTDK FAQGSDAK++CKADGFP+P++TWK+A + TP DY+D N+ NIK+ DG+L I NI+K NEGYYLC+A NGIG G+SAV I+VQAPP FEIK R QTA E TVLQCEA+GEKPIGI WNMNNKRLD D RYT+REE +G+LS +SIK+T+R DSALFTC ATNAFG DDTSINLIIQE PE PYGL+V+DK+GR+V+LSW APY+GNS + RY+IE+K +GTW D+D VLVPG QT+AGVF+LRPAT+YH R+VA+N+IG S PSDTV I TAEEAP GPP ++V A DQH L K++W P NG I GY V Y + + ++ + + ++ ++ LK YT Y+V V AF G G SE T + IP PP ++ + I VSW P NG I Y V D D K K+ + + + L K Y V A T+ G+G S + +P
Sbjct: 22 EDDTAGPVYIREPPNRVDFSNTTGAVVECSARGNPVPEIIWVRSDGTAVGDVPGLRQVLPNGNLVFPPFRAEDYRQEVHAQVYVCLARNSVGTIHSRDVNVRAVVAQFYVTEAENEYVIRGNSAVMKCKIPSFVADFVSVESWVADDGQTLTYSTTSDNYDGKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRLTGETRLSATKGRL-VITEPTSNIAPKSPGKKYEGGEIMYSP-----------AGQRVFMSCQVVGFPVPLFRWYKFVD--GTM--RKQAVTLDDR-VKQVSGTLIIKEARVEDSGK-YLCVVNNSVGGESVETV----LTVTAPLAANIEPTTQTVDF-------GRPAVFTCNFEGNPIKMISWLK------DGKSLSHEDSV------LRIESVKKEDKGMYQCFIRNDQENAQASAELKLGGRFEPPQIRQAFKEETLQPGPSVFLKCIALGNPTPEITWELDGKKLSNSDRLQVGQYVTVNGDVVSHLNISSIHTNDGGLYKCIASSKVGSVEHAAKLNVFGL----PFIRPMEKKAIVAGETLIVTCPVAGYPIETIVW-------ERDGRVLPINRKQKVFPNGTLI-IENVE--RLSDQATYTCVARNAQGYSARGTLEVQVMVLPRIVPFHFDVPIFAGQATQVTCLVSEGDPPLDITWSFQGTEL----------SSQMGISTAKFGRKTSVLVI---DPASSGHRGNYTCTVRNPAGYVNYTASLDV-------------------HVPPRWILEPTDKAFAQGSDAKVECKADGFPRPQVTWKRAAGD------TPGDYKDLKP-NNPNIKVEDGTLTINNIQKTNEGYYLCEAVNGIGSGLSAVILISVQAPPHFEIKLRNQTARRGEPTVLQCEARGEKPIGIRWNMNNKRLDPKTDTRYTMREEILPNGVLSDLSIKQTERTDSALFTCEATNAFGIDDTSINLIIQEVPEVPYGLRVLDKSGRSVQLSWAAPYDGNSPIKRYLIEYKIARGTWEADIDRVLVPGQQTVAGVFNLRPATTYHLRIVAENEIGTSEPSDTVPIITAEEAPGGPPTAVKVEAEDQHKL-------------------------------------KISWKPPERDQWNGEILGYYVGYKLASSDKPYLFETVEFSKEEGKEHHLQVGELKTYTQYSVVVQAFNKVGPGPMSEETRQYTAEGIPEQPPQDTTCTTLTSQTIRVSWVSPPLTAANGIIKGYKVVYGPSDAWYDENTKDTKITSSSET-ILHGLKKYTNYSMQVLAFTSGGDGVRSAPIHCQTEQDVP 1210 HSP 3 Score: 123.635 bits (309), Expect = 3.766e-24 Identity = 125/328 (38.11%), Postives = 160/328 (48.78%), Query Frame = 0
Query: 1636 GTIAPPFGKDTKATQAGFPGLPDWLDLDIIVPVVATVIVICVGILVVCVALTRRKHPPPLMHPEEYAQYYGQMNTNGRMMTMKHDGLPYEEMGYCPPPNRKLPPVPGTHSNYNTIDRIKNGHKTKGAGAYATYDRRNKGEGPQYDEIPYGDVGLAANGQSGKGQLPQIPDDYSQVPHVPARQVGGSIANGDEDISPYATFHLLGMREENKGGPNPA-NFQTLPPGAGGAQT-----GPNTPA----------RHLSQTM---NPRRS-IANPGGPMQ----PALYDSVNCDYEPGTYQAPQNQNFGNPYDCPEGMYGGSMVSSVGYSK 1939
GTIAPP + T Q FP +P+WLDL+I+VP+ ATV+VI VG++V+CVAL+RR P + Y N M + D +E+GY PPNRKLPPVPG SNYNT DRIK GH + ++AT+D R+ Y+E+ G+ ++P P V H A +++I PYATFHLLG REE PN A FQT P G +T GP P R SQ+M N R S +AN G P D NC E Y + Q +G PYD G G SVG ++
Sbjct: 1591 GTIAPPEQEHTSVNQY-FPWVPEWLDLNIVVPIGATVVVIIVGVVVICVALSRRSRGPEQTRLRDDVAYNQSAGGNSTMDKRRPD--LRDELGYIAPPNRKLPPVPG--SNYNTCDRIKRGH-SGSFRSHATWDPRHPRH--MYEELSLHPPGIR--------RIPAHPGSDETVYHR---------AGMEDEICPYATFHLLGFREEMD--PNKAMQFQTFPHQNGHERTHSGTIGPMGPGGVAGNGHIHQRSGSQSMPRANGRYSRVANQNGAANFAPGPEYDDPANCAPEEDQYGSQYGQ-YGAPYDH-YGSRGSVSRRSVGSAR 1889
BLAST of down syndrome cell adhesion molecule isoform x1 vs. nr
Match: gi|1008451770|ref|XP_015838915.1| (PREDICTED: Down syndrome cell adhesion molecule isoform X43 [Tribolium castaneum]) HSP 1 Score: 1541.55 bits (3990), Expect = 0.000e+0 Identity = 781/1512 (51.65%), Postives = 1013/1512 (67.00%), Query Frame = 0
Query: 230 VVYQPYQQEASNEYVIVGNSALFKCEVPSFVADVVDLVGWIDSEGTSFDRSQHSNYDGKYVVLPSGELQIRNVSPDDGFKTYKCRTKHRLTGETKLSATAGKLVITEPLASGKPKFSSIVKLSAFQKTQGGNIAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDDRVKQVGGTLIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVTAPLSVEVEPKQQVVDYGRSATFKCHYDGNPVKSVYWLKNGEPVGHTETTLRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAPYVRKMLPMKVVAGKSMFVTCPVAGYPISSVTWEKDGRQLPFNDRQTVYRNGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAI------------------------------VPFSFGKDVINEGDFAQVMCSISRGDEPLLR--------------------------------PRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIG-GISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFGSDDTSINLIIQEKPETPYGLKVVDKTGRTVKLSWQAPYNGNSNLTRYVIEFKPIKGTWANDVDHVLVPGDQTMAGVFSLRPATSYHFRVVAQNDIGVS----------------GPSDTVTIETAEEAPS----GPP-------------VDIRVAAVD----------------QHTLRM-------------------GQGPMSDEVLVHTAEGAPTQPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVYGPSKTWYDPSTRNTKVSTDNEAELTSLKKYTNYTVQVLAFTNGGDGVKSEVLTSTTEQDIPGPPSSVKALAMSEEAILVSWQYPEEPNGKIIQYTVYIKEL--DRSRDIAPKTNKV----NALQMSHQVDNLNKKARYEFWVTAHTTIGEGSPSIKVTLSPTNRIPAKIASFDDDFVAMVKQDVKLPCIAVGSPNPQLHWKMRGQPIPKNDRIRQLPDGSLQITRVLKEDTGKYVCMVNNKYGQDMVTHELVVNGPPDPPEVTITSQTTDTITVKLKTSNPEDKTPVHGYILHYKPEFGDWNTAQIPFGSDEFTLDSLLCGQRYHLYVTAHNSIGVGPKSTQLTANTKGVEPTVPEAHRFLEVSAGSVTLHLNAWMDGGCPILYFVVEYKPRHHQDWTLVSNSVKAGGNFVVLDLNPATWYNLRVTAHNNAGFSVAEYEFATLTVTGGTIAPVREIDGSGSSAGDGRNPFEESLMYFLTNVN 1604
VV Q Y+ E +EYVI GN+A+ KC +PSFVAD V + W+ S+G+ ++ + +NYD KY+VLPSGEL IR+V P+DG+K+Y+CRTKHRLTGET+LSAT G+LVITEP+ S PKF + L F+ + + CPAQ +P+P++RWYKF+E K+ V L+DRVKQV GTLII+EAKV+DSGKYLC+VNNSVGGESVETVLTVTAPL ++EP+ Q +D+GR ATF C+++GNP+K++ WLK+G P+ H E LRI SV+KED+GMYQCF+RNDQESA+AT ELKLGGRF+PP+ AF+ T QPG V LKC+A G+P PE+ W +YG + Q+G + + NGDVVS+LNI+ T GG Y C ASSKVG HSA++NV G P+VR M +VAG ++ V CP AG+P+ SV WE+DGRQLP N +Q V+ NGTL I NV+R D +TY CVA+N +GYSAR L V VM PP I + ++ I+E D VM + R + + PRW +EPTDK FAQGSDA ++CKADGFP+P +TWK+A +P DY+DF N+ +IK+ DG+L I NI+K NEGYYLC+A NGIG G+SAV +I+VQAPP F+IK R QT+ + VLQCEAKGEKPIGILWN+NNKRL+ D RYTIREE +G+LS +SIKRT+R DSALFTCVATNAFGSDDTSIN+I+QE PE PYGLKV+DK+GR+V+LSW AP++GNS +TRY+IE+K K +W + + VLVPGDQT AGVF+LRPAT+YH R+VA+N+IG S GP ++ +ET ++ PP V R+A D +H L++ G GP+SD++ +TAEG P QPP + TTL++Q I+V+W SPPL +ANGVIKGYKV+YGPS TW+D +T++TK++ +E L LKKYTNY+++VLA+T+GGDGV++ + TEQD+P P +VKAL MS ++IL SW+ P EPNG + YTVY K + D ++ P + K+ +SHQ NL+ +YEFWVTA TTIGEG PS KVT+SP+ +PAKIASFDD F K+DV LPC+AVG P P + WK++G +D+IRQ PDGSL I V + + G+Y C V N YGQD VTH+L+VN PP P++ +TS TT+++T KLK + D P+HGY +HYKPEFGDW T QI +++TL+ LLCG RY +Y A+NSIG G S L T+G +P VP A +F+EVS+ S+TLHL+AW DGGCP+LYFV+E+K + +W VSN+VK G NFV+LDL+PA WY+LRVTAHNNAGF+VAEYEFATLTVTGGTIAP REI P E++ L N+N
Sbjct: 120 VVNQYYEAEVVSEYVIRGNTAVLKCNIPSFVADFVRVEAWVGSDGSLYNHT--ANYDSKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPIGSVLPKFPATDNLRGFESKSNSTVTLLCPAQAFPVPLYRWYKFVEGTTRKQAVTLNDRVKQVAGTLIIREAKVEDSGKYLCVVNNSVGGESVETVLTVTAPLKAKIEPQVQTIDFGRPATFTCNFEGNPIKTISWLKDGHPIDHNEAVLRIESVRKEDKGMYQCFIRNDQESAEATAELKLGGRFEPPQIRHAFNEETVQPGNSVFLKCIASGNPTPEITWELYGRRLSNSERNQIGQYVTVNGDVVSHLNITAIHTNDGGLYRCVASSKVGSADHSARINVYGLPFVRSMEKQAIVAGGTLIVHCPFAGHPVDSVVWERDGRQLPINRKQKVFINGTLIIENVERASDQATYDCVAKNSQGYSARGSLEVQVMVPPQINPFEFGQDSVNSGDLLMTICFVTKGDLPIKISWTLNSKPISEIDGITVMNTNKRASQLTIESVEAHHRGEYKCIAENKAGVSEFSTFLNVNVPPRWILEPTDKAFAQGSDAAVECKADGFPRPVVTWKRAT------GVSPGDYKDFKP-NNPDIKVEDGTLTINNIQKTNEGYYLCEAVNGIGSGLSAVIQISVQAPPQFDIKLRNQTSRRGDPAVLQCEAKGEKPIGILWNINNKRLEPKGDNRYTIREEILANGVLSGLSIKRTERSDSALFTCVATNAFGSDDTSINMIVQEVPEVPYGLKVLDKSGRSVQLSWVAPFDGNSPITRYMIEYKQSKVSWEGNTERVLVPGDQTEAGVFTLRPATTYHIRIVAENEIGSSEPSETVTIITAEEVPGGPPTSIRVETNDQHSLVVYWKPPAREEWNGDILGYYVGYRLANSDKPYLFETVEFGREEGKEHHLKISNLKTYTQYSVVVQAFNKVGAGPLSDDIKAYTAEGVPEQPPDKATCTTLTAQTIRVSWVSPPLTAANGVIKGYKVIYGPSDTWFDENTKDTKITAASETILHGLKKYTNYSMEVLAYTSGGDGVRTTPIHCQTEQDVPEAPIAVKALVMSTDSILASWKPPVEPNGIVEYYTVYYKPVSTDDKTEVKPTSQKIVPNLRNQNLSHQAKNLDSNLKYEFWVTAATTIGEGQPSKKVTVSPSASVPAKIASFDDTFTTTYKEDVTLPCLAVGLPPPVITWKIKGVQFTTSDKIRQQPDGSLFIRDVSRNNAGEYSCHVENDYGQDSVTHQLIVNAPPHAPQIALTSTTTNSLTFKLK-PHESDVEPIHGYTIHYKPEFGDWETVQIGPTVEKYTLEKLLCGTRYQVYAKAYNSIGTGDPSDTLNPRTRGEKPIVPSAEKFIEVSSNSITLHLSAWSDGGCPMLYFVIEHKKKTSTEWIQVSNNVKLGQNFVLLDLDPACWYHLRVTAHNNAGFNVAEYEFATLTVTGGTIAPAREI------------PKEDTFQIILANLN 1609 HSP 2 Score: 676.011 bits (1743), Expect = 0.000e+0 Identity = 484/1315 (36.81%), Postives = 663/1315 (50.42%), Query Frame = 0
Query: 18 AQSDTNGPVFIQEPPNQMDFSNTTGTEIICQSRGTPMPQITWVKGDGSIVQDVPGLRKVMANGNLVLPPFRAEDYNQEVHAQTYRCIAENTLGKVQSRDVQVRAVVHQSYDVYVEMEHVIMGNDVLFKCKIPSYVTDLVQVLDWVESHGNSLKTAPN----FVVIQPFET---DVG-----KEYVILGNDALMKCSIPSFVADQLEVVSWHGSDGSEIRPGQIHVVYQPYQQEASNEYVIVGNSALFKCEVPSFVADVVDLVGWID-SEGTSFDRSQHSNYDGKYVVLPSGELQIRNVSPDDGFKTYKCRTKHRLTGETKLSATAGKLVITEPLASGKPKFSSIVKLSAFQKTQGGNIAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDDRVKQVGGTLIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVTAPLSVEVEPKQ-------QVVDYGRSATFKCHYDGNPVKSVYWLKNGEPVGHTE---------------TTLRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAPYVRKMLPMK----------VVAGKSMFVTCPV--AGYPISSVTWEKDGRQLPFNDRQTVY----RNGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIG-GISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFGSDDTSINLIIQEKPETPYGLKVVDKTGRTVKLSWQAPYNGNSNLTRYVIEFKPIKGTWANDVDHVLVPGDQTMAGVFSLRPATSYHFRVVAQNDIGVSGPSDTVTIETAEEAPSGPPVDIRVAAVDQHTLRMGQGPMSDEVLVHTAEGAPTQPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVYGPSKT----WYDPSTRNTKVSTDNEAELTSLKKYTNYTVQVLAFTNGGDGVKSEVLTSTTEQDIP-GPPSSVKALAMSEEAILVSWQYP--EEPNGKIIQYTVYIKELDRSRDIAPKTNKVNALQMSHQVDNLNKKARYEFWVTAHTTIGEG 1273
A+ DT+GPVF++EPPN++DFSNTTG + C + G P P I WV+ DG+ V DVPGLR+V+ANGNLV PPFRAEDY QEVHAQ Y C+A+N++G V SRDV VRAVV+Q Y+ V E+VI GN + KC IPS+V D V+V WV S G+ N ++V+ E DVG K Y L + S +L + GS + P ++ + ++ ++++ ++ C +F V L W EGT+ ++ N K V +G L IR +D K Y C + + GE+ + L +T PL K K V+ F G TC +G PI W K ++ + V L I+ + +D G Y C + N ES E T L EP Q + V G S KC GNP + W G + ++E + L I ++ D G+Y+C + SA + + + G FV + + G + + C G P V W G + + +V NG ++ N+ +A + TY+C A + G +SA+ G+ V+ M+P + V +G + C V PI ++W + + + D TV R L I +V+ Y C+A N G S S + V P PRW +EPTDK FAQGSDA ++CKADGFP+P +TWK+A +P DY+DF N+ +IK+ DG+L I NI+K NEGYYLC+A NGIG G+SAV +I+VQAPP F+IK R QT+ + VLQCEAKGEKPIGILWN+NNKRL+ D RYTIREE +G+LS +SIKRT+R DSALFTCVATNAFGSDDTSIN+I+QE PE PYGLKV+DK+GR+V+LSW AP++GNS +TRY+IE+K K +W + + VLVPGDQT AGVF+LRPAT+YH R+VA+N+IG S PS+TVTI TAEE P GPP IRV DQH+L V W P NG I GY V Y + + ++ + ++ ++++LK YT Y+V V AF G G S+ + + T + +P PP ++ + I VSW P NG I Y V D D K K+ A + + L K Y V A+T+ G+G
Sbjct: 16 AEDDTSGPVFVREPPNRIDFSNTTGAVVECSAHGNPTPDIIWVRSDGTAVGDVPGLRQVLANGNLVFPPFRAEDYRQEVHAQVYVCLAKNSVGSVHSRDVNVRAVVNQYYEAEVVSEYVIRGNTAVLKCNIPSFVADFVRVEAWVGSDGSLYNHTANYDSKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPIGSVLPKF-PATDNL--RGFESKSNSTVTLL-------CPAQAF---PVPLYRWYKFVEGTTRKQAVTLNDRVKQV---AGTLIIREAKVEDSGK-YLCVVNNSVGGESVETV----LTVTAPL---KAKIEPQVQTIDF----GRPATFTCNFEGNPIKTISWLKDGHPIDHNEAV------------LRIESVRKEDKGMYQCFIRND--QESAEA--TAELKLGGRFEPPQIRHAFNEETVQPGNSVFLKCIASGNPTPEITWELYGRRLSNSERNQIGQYVTVNGDVVSHLNITAIHTNDGGLYRCVASSKVGSADHSARINVYGL----PFVRSMEKQAIVAGGTLIVHCPFAGHPVDSVVWERDGRQLPINRKQKVFI----NGTLI-IENVERASDQ--ATYDCVAKNSQG---YSAR----GSLEVQVMVPPQINPFEFGQDSVNSGDLLMTICFVTKGDLPI-KISWTLNSKPISEIDGITVMNTNKRASQLTIESVEAHHRGE-YKCIAENKAGVSEFSTF-LNVNVP----------------------------------PRWILEPTDKAFAQGSDAAVECKADGFPRPVVTWKRAT------GVSPGDYKDFKP-NNPDIKVEDGTLTINNIQKTNEGYYLCEAVNGIGSGLSAVIQISVQAPPQFDIKLRNQTSRRGDPAVLQCEAKGEKPIGILWNINNKRLEPKGDNRYTIREEILANGVLSGLSIKRTERSDSALFTCVATNAFGSDDTSINMIVQEVPEVPYGLKVLDKSGRSVQLSWVAPFDGNSPITRYMIEYKQSKVSWEGNTERVLVPGDQTEAGVFTLRPATTYHIRIVAENEIGSSEPSETVTIITAEEVPGGPPTSIRVETNDQHSL-------------------------------------VVYWKPPAREEWNGDILGYYVGYRLANSDKPYLFETVEFGREEGKEHHLKISNLKTYTQYSVVVQAFNKVGAGPLSDDIKAYTAEGVPEQPPDKATCTTLTAQTIRVSWVSPPLTAANGVIKGYKVIYGPSDTWFDENTKDTKITAASET-ILHGLKKYTNYSMEVLAYTSGGDG 1186 HSP 3 Score: 79.337 bits (194), Expect = 1.205e-10 Identity = 77/218 (35.32%), Postives = 101/218 (46.33%), Query Frame = 0
Query: 1725 EEMGYCPPPNRKLPPVPGTHSNYNTIDRIKNGHKTKGA-GAYATYDRRNKGEGPQYDEIPYGDVGLAANGQSGKGQLPQIPDDYSQVPHVPARQVGGSIANGDEDISPYATFHLLGMREENKGGPNPA-NFQTLPPGAGGAQ--TGPNTP----ARHLSQTMNPRR-------------SIANPGGPMQPALYDSVNCDYEPGTYQAPQNQNFGNPYD 1921
+E+GY PPNRKLPPVPG SNYNT DRIK G + +++T+D R Y+E+ +S +G + + + D++I PYATFHLLG REE P+ A FQT P G +G NTP +R SQ+M PR+ SI +PG P D NC E Y + Q +G PYD
Sbjct: 1663 DELGYIAPPNRKLPPVPG--SNYNTCDRIKRGTVLRAHYRSHSTWDPRRH----LYEEL-----------RSRRG----------------SNETVHTHRGMDDEICPYATFHLLGFREEMD--PSKAMQFQTFPHPHSGTMGPSGMNTPHQIHSRSGSQSM-PRQNRRYDRVGSQGNGSIYSPG----PEYDDPANCAPEDEQYGS-QYGGYGAPYD 1839
BLAST of down syndrome cell adhesion molecule isoform x1 vs. nr
Match: gi|1008451704|ref|XP_015838882.1| (PREDICTED: Down syndrome cell adhesion molecule isoform X10 [Tribolium castaneum]) HSP 1 Score: 1541.17 bits (3989), Expect = 0.000e+0 Identity = 780/1488 (52.42%), Postives = 1005/1488 (67.54%), Query Frame = 0
Query: 230 VVYQPYQQEASNEYVIVGNSALFKCEVPSFVADVVDLVGWIDSEGTSFDRSQHSNYDGKYVVLPSGELQIRNVSPDDGFKTYKCRTKHRLTGETKLSATAGKLVITEPLASGKPKFSSIVKLSAFQKTQGGNIAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDDRVKQVGGTLIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVTAPLSVEVEPKQQVVDYGRSATFKCHYDGNPVKSVYWLKNGEPVGHTETTLRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAPYVRKMLPMKVVAGKSMFVTCPVAGYPISSVTWEKDGRQLPFNDRQTVYRNGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAI------------------------------VPFSFGKDVINEGDFAQVMCSISRGDEPLLR--------------------------------PRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIG-GISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFGSDDTSINLIIQEKPETPYGLKVVDKTGRTVKLSWQAPYNGNSNLTRYVIEFKPIKGTWANDVDHVLVPGDQTMAGVFSLRPATSYHFRVVAQNDIGVS----------------GPSDTVTIETAEEAPS----GPP-------------VDIRVAAVD----------------QHTLRM-------------------GQGPMSDEVLVHTAEGAPTQPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVYGPSKTWYDPSTRNTKVSTDNEAELTSLKKYTNYTVQVLAFTNGGDGVKSEVLTSTTEQDIPGPPSSVKALAMSEEAILVSWQYPEEPNGKIIQYTVYIKEL--DRSRDIAPKTNKV----NALQMSHQVDNLNKKARYEFWVTAHTTIGEGSPSIKVTLSPTNRIPAKIASFDDDFVAMVKQDVKLPCIAVGSPNPQLHWKMRGQPIPKNDRIRQLPDGSLQITRVLKEDTGKYVCMVNNKYGQDMVTHELVVNGPPDPPEVTITSQTTDTITVKLKTSNPEDKTPVHGYILHYKPEFGDWNTAQIPFGSDEFTLDSLLCGQRYHLYVTAHNSIGVGPKSTQLTANTKGVEPTVPEAHRFLEVSAGSVTLHLNAWMDGGCPILYFVVEYKPRHHQDWTLVSNSVKAGGNFVVLDLNPATWYNLRVTAHNNAGFSVAEYEFATLTVTGGTIAPVREIDG 1580
VV Q YQ E +NEYVI GN+A+ KC +PSFVAD V +V W D+EG S+ Q +NYD KY+VLPSGEL IR+V P+DG+K+Y+CRTKHRLTGET+LSAT G+LVITEP+ P F + ++ +T + + C AQ YP+P+FRWYKF+E K+ V L+DRVKQV GTLII+EAKV+DSGKYLC+VNNSVGGESVETVLTVTAPL ++EP+ Q +D+GR ATF C+++GNP+K++ WLK+G P+ H E LRI SV+KED+GMYQCF+RNDQESA+AT ELKLGGRF+PP+ AF+ T QPG V LKC+A G+P PE+ W +YG + Q+G + + NGDVVS+LNI+ T GG Y C ASSKVG HSA++NV G P+VR M +VAG ++ V CP AG+P+ SV WE+DGRQLP N +Q V+ NGTL I NV+R D +TY CVA+N +GYSAR L V VM PP I + ++ I+E D VM + R + + PRW +EPTDK FAQGSDA ++CKADGFP+P +TWK+A +P DY+DF N+ +IK+ DG+L I NI+K NEGYYLC+A NGIG G+SAV +I+VQAPP F+IK R QT+ + VLQCEAKGEKPIGILWN+NNKRL+ D RYTIREE +G+LS +SIKRT+R DSALFTCVATNAFGSDDTSIN+I+QE PE PYGLKV+DK+GR+V+LSW AP++GNS +TRY+IE+K K +W + + VLVPGDQT AGVF+LRPAT+YH R+VA+N+IG S GP ++ +ET ++ PP V R+A D +H L++ G GP+SD++ +TAEG P QPP + TTL++Q I+V+W SPPL +ANGVIKGYKV+YGPS TW+D +T++TK++ +E L LKKYTNY+++VLA+T+GGDGV++ + TEQD+P P +VKAL MS ++IL SW+ P EPNG + YTVY K + D ++ P + K+ +SHQ NL+ +YEFWVTA TTIGEG PS KVT+SP+ +PAKIASFDD F K+DV LPC+AVG P P + WK++G +D+IRQ PDGSL I V + + G+Y C V N YGQD VTH+L+VN PP P++ +TS TT+++T KLK + D P+HGY +HYKPEFGDW T QI +++TL+ LLCG RY +Y A+NSIG G S L T+G +P VP A +F+EVS+ S+TLHL+AW DGGCP+LYFV+E+K + +W VSN+VK G NFV+LDL+PA WY+LRVTAHNNAGF+VAEYEFATLTVTGGTIAP+RE G
Sbjct: 120 VVQQFYQTEVNNEYVIRGNAAVLKCSIPSFVADFVTVVSWHDTEGHSYGLEQ-TNYDSKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPIGFKAPTFQNDATSISYTRTINQSFGLLCQAQAYPVPIFRWYKFVEGTTRKQAVTLNDRVKQVAGTLIIREAKVEDSGKYLCVVNNSVGGESVETVLTVTAPLKAKIEPQVQTIDFGRPATFTCNFEGNPIKTISWLKDGHPIDHNEAVLRIESVRKEDKGMYQCFIRNDQESAEATAELKLGGRFEPPQIRHAFNEETVQPGNSVFLKCIASGNPTPEITWELYGRRLSNSERNQIGQYVTVNGDVVSHLNITAIHTNDGGLYRCVASSKVGSADHSARINVYGLPFVRSMEKQAIVAGGTLIVHCPFAGHPVDSVVWERDGRQLPINRKQKVFINGTLIIENVERASDQATYDCVAKNSQGYSARGSLEVQVMVPPQINPFEFGQDSVNSGDLLMTICFVTKGDLPIKISWTLNSKPISEIDGITVMNTNKRASQLTIESVEAHHRGEYKCIAENKAGVSEFSTFLNVNVPPRWILEPTDKAFAQGSDAAVECKADGFPRPVVTWKRAT------GVSPGDYKDFKP-NNPDIKVEDGTLTINNIQKTNEGYYLCEAVNGIGSGLSAVIQISVQAPPQFDIKLRNQTSRRGDPAVLQCEAKGEKPIGILWNINNKRLEPKGDNRYTIREEILANGVLSGLSIKRTERSDSALFTCVATNAFGSDDTSINMIVQEVPEVPYGLKVLDKSGRSVQLSWVAPFDGNSPITRYMIEYKQSKVSWEGNTERVLVPGDQTEAGVFTLRPATTYHIRIVAENEIGSSEPSETVTIITAEEVPGGPPTSIRVETNDQHSLVVYWKPPAREEWNGDILGYYVGYRLANSDKPYLFETVEFGREEGKEHHLKISNLKTYTQYSVVVQAFNKVGAGPLSDDIKAYTAEGVPEQPPDKATCTTLTAQTIRVSWVSPPLTAANGVIKGYKVIYGPSDTWFDENTKDTKITAASETILHGLKKYTNYSMEVLAYTSGGDGVRTTPIHCQTEQDVPEAPIAVKALVMSTDSILASWKPPVEPNGIVEYYTVYYKPVSTDDKTEVKPTSQKIVPNLRNQNLSHQAKNLDSNLKYEFWVTAATTIGEGQPSKKVTVSPSASVPAKIASFDDTFTTTYKEDVTLPCLAVGLPPPVITWKIKGVQFTTSDKIRQQPDGSLFIRDVSRNNAGEYSCHVENDYGQDSVTHQLIVNAPPHAPQIALTSTTTNSLTFKLK-PHESDVEPIHGYTIHYKPEFGDWETVQIGPTVEKYTLEKLLCGTRYQVYAKAYNSIGTGDPSDTLNPRTRGEKPIVPSAEKFIEVSSNSITLHLSAWSDGGCPMLYFVIEHKKKTSTEWIQVSNNVKLGQNFVLLDLDPACWYHLRVTAHNNAGFNVAEYEFATLTVTGGTIAPIRESPG 1598 HSP 2 Score: 681.404 bits (1757), Expect = 0.000e+0 Identity = 481/1316 (36.55%), Postives = 665/1316 (50.53%), Query Frame = 0
Query: 18 AQSDTNGPVFIQEPPNQMDFSNTTGTEIICQSRGTPMPQITWVKGDGSIVQDVPGLRKVMANGNLVLPPFRAEDYNQEVHAQTYRCIAENTLGKVQSRDVQVRAVVHQSYDVYVEMEHVIMGNDVLFKCKIPSYVTDLVQVLDWVESHGNSLKTAPNFVVIQPFETDVGKEYVILGNDALMKCSI-PSFVADQLEVVSWHGSDGSEIR----PGQIHVVYQP-------YQQEASN-EYVIVGNSAL-FKCEVPSFVADVVDLVGWIDSEGTSFDRSQHSNYDGKYVVLPSGELQIRNVSPDDGFKTYKCRTKHRLTGETKLSATAGKLVITEPLASGKPKFSSIVKLSAFQKTQGGNIAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDDRVKQVGGTLIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVTAPLSVEVEPKQ-------QVVDYGRSATFKCHYDGNPVKSVYWLKNGEPVGHTE---------------TTLRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAPYVRKMLPMK----------VVAGKSMFVTCPV--AGYPISSVTWEKDGRQLPFNDRQTVY----RNGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIG-GISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFGSDDTSINLIIQEKPETPYGLKVVDKTGRTVKLSWQAPYNGNSNLTRYVIEFKPIKGTWANDVDHVLVPGDQTMAGVFSLRPATSYHFRVVAQNDIGVSGPSDTVTIETAEEAPSGPPVDIRVAAVDQHTLRMGQGPMSDEVLVHTAEGAPTQPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVYGPSKT----WYDPSTRNTKVSTDNEAELTSLKKYTNYTVQVLAFTNGGDGVKSEVLTSTTEQDIP-GPPSSVKALAMSEEAILVSWQYP--EEPNGKIIQYTVYIKELDRSRDIAPKTNKVNALQMSHQVDNLNKKARYEFWVTAHTTIGEG 1273
A+ DT+GPVF++EPPN++DFSNTTG + C + G P P I WV+ DG+ V DVPGLR+V+ANGNLV PPFRAEDY QEVHAQ Y C+A+N++G V SRDV VRAVV Q Y V E+VI GN + KC IPS+V D V V+ W ++ G+S +T+ +Y++L + L + P + + H G E R G++ V+ +P +Q +A++ Y N + C+ ++ + ++ EGT+ ++ N K V +G L IR +D K Y C + + GE+ + L +T PL K K V+ F G TC +G PI W K ++ + V L I+ + +D G Y C + N ES E T L EP Q + V G S KC GNP + W G + ++E + L I ++ D G+Y+C + SA + + + G FV + + G + + C G P V W G + + +V NG ++ N+ +A + TY+C A + G +SA+ G+ V+ M+P + V +G + C V PI ++W + + + D TV R L I +V+ Y C+A N G S S + V P PRW +EPTDK FAQGSDA ++CKADGFP+P +TWK+A +P DY+DF N+ +IK+ DG+L I NI+K NEGYYLC+A NGIG G+SAV +I+VQAPP F+IK R QT+ + VLQCEAKGEKPIGILWN+NNKRL+ D RYTIREE +G+LS +SIKRT+R DSALFTCVATNAFGSDDTSIN+I+QE PE PYGLKV+DK+GR+V+LSW AP++GNS +TRY+IE+K K +W + + VLVPGDQT AGVF+LRPAT+YH R+VA+N+IG S PS+TVTI TAEE P GPP IRV DQH+L V W P NG I GY V Y + + ++ + ++ ++++LK YT Y+V V AF G G S+ + + T + +P PP ++ + I VSW P NG I Y V D D K K+ A + + L K Y V A+T+ G+G
Sbjct: 16 AEDDTSGPVFVREPPNRIDFSNTTGAVVECSAHGNPTPDIIWVRSDGTAVGDVPGLRQVLANGNLVFPPFRAEDYRQEVHAQVYVCLAKNSVGSVHSRDVNVRAVVQQFYQTEVNNEYVIRGNAAVLKCSIPSFVADFVTVVSWHDTEGHSYGLE---------QTNYDSKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRLTG-ETRLSATKGRL-VITEPIGFKAPTFQNDATSISYTRTINQSFGLLCQAQAYPVPIFRWYKFV--EGTTRKQAVTLNDRVKQV---AGTLIIREAKVEDSGK-YLCVVNNSVGGESVETV----LTVTAPL---KAKIEPQVQTIDF----GRPATFTCNFEGNPIKTISWLKDGHPIDHNEAV------------LRIESVRKEDKGMYQCFIRND--QESAEA--TAELKLGGRFEPPQIRHAFNEETVQPGNSVFLKCIASGNPTPEITWELYGRRLSNSERNQIGQYVTVNGDVVSHLNITAIHTNDGGLYRCVASSKVGSADHSARINVYGL----PFVRSMEKQAIVAGGTLIVHCPFAGHPVDSVVWERDGRQLPINRKQKVFI----NGTLI-IENVERASDQ--ATYDCVAKNSQG---YSAR----GSLEVQVMVPPQINPFEFGQDSVNSGDLLMTICFVTKGDLPI-KISWTLNSKPISEIDGITVMNTNKRASQLTIESVEAHHRGE-YKCIAENKAGVSEFSTF-LNVNVP----------------------------------PRWILEPTDKAFAQGSDAAVECKADGFPRPVVTWKRAT------GVSPGDYKDFKP-NNPDIKVEDGTLTINNIQKTNEGYYLCEAVNGIGSGLSAVIQISVQAPPQFDIKLRNQTSRRGDPAVLQCEAKGEKPIGILWNINNKRLEPKGDNRYTIREEILANGVLSGLSIKRTERSDSALFTCVATNAFGSDDTSINMIVQEVPEVPYGLKVLDKSGRSVQLSWVAPFDGNSPITRYMIEYKQSKVSWEGNTERVLVPGDQTEAGVFTLRPATTYHIRIVAENEIGSSEPSETVTIITAEEVPGGPPTSIRVETNDQHSL-------------------------------------VVYWKPPAREEWNGDILGYYVGYRLANSDKPYLFETVEFGREEGKEHHLKISNLKTYTQYSVVVQAFNKVGAGPLSDDIKAYTAEGVPEQPPDKATCTTLTAQTIRVSWVSPPLTAANGVIKGYKVIYGPSDTWFDENTKDTKITAASET-ILHGLKKYTNYSMEVLAYTSGGDG 1187 HSP 3 Score: 93.2041 bits (230), Expect = 7.263e-15 Identity = 112/308 (36.36%), Postives = 152/308 (49.35%), Query Frame = 0
Query: 1636 GTIAPPFGKDTKATQAGFPGLPDWLDLDIIVPVVATVIVICVGILVVCVALTRRKHPPPLMH-PEEYAQYYGQMNTNGRMMTMKHDGLPYEEMGYCPPPNRKLPPVPGTHSNYNTIDRIKNGHKTKGA-GAYATYDRRNKGEGPQYDEIPYGDVGLAANGQSGKGQLPQIPDDYSQVPHVPARQVGGSIANGDEDISPYATFHLLGMREENKGGPNPA-NFQTLPPGAGGAQ--TGPNTP----ARHLSQTMNPRR-------------SIANPGGPMQPALYDSVNCDYEPGTYQAPQNQNFGNPYD 1921
GTIAP +++ + FP +PDW+DL+I VPV ATV+V+ VGI+V+CVAL+RR + P +Y Y Q + + L +E+GY PPNRKLPPVPG SNYNT DRIK G + +++T+D R Y+E+ +S +G + + + D++I PYATFHLLG REE P+ A FQT P G +G NTP +R SQ+M PR+ SI +PG P D NC E Y + Q +G PYD
Sbjct: 1588 GTIAPI--RESPGVKMLFPWIPDWVDLNIAVPVAATVVVVVVGIVVICVALSRRANGPLQTRLRSDYDVVYNQSVNASSTLDKRRPDL-RDELGYIAPPNRKLPPVPG--SNYNTCDRIKRGTVLRAHYRSHSTWDPRRH----LYEEL-----------RSRRG----------------SNETVHTHRGMDDEICPYATFHLLGFREEMD--PSKAMQFQTFPHPHSGTMGPSGMNTPHQIHSRSGSQSM-PRQNRRYDRVGSQGNGSIYSPG----PEYDDPANCAPEDEQYGS-QYGGYGAPYD 1851
BLAST of down syndrome cell adhesion molecule isoform x1 vs. nr
Match: gi|1339078580|ref|XP_023726715.1| (Down syndrome cell adhesion molecule-like protein Dscam2 isoform X19 [Cryptotermes secundus]) HSP 1 Score: 1510.74 bits (3910), Expect = 0.000e+0 Identity = 787/1486 (52.96%), Postives = 1009/1486 (67.90%), Query Frame = 0
Query: 230 VVYQPYQQEASNEYVIVGNSALFKCEVPSFVADVVDLVGWIDSEGTSFDRSQHS-NYDGKYVVLPSGELQIRNVSPDDGFKTYKCRTKHRLTGETKLSATAGKLVITEPLASGKPKFSSIVKLSAFQKTQGGNIA---------VTCPAQGYPIPVFRWYKFMESNNNKKLVALDDRVKQVGGTLIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVTAPLSVEVEPKQQVVDYGRSATFKCHYDGNPVKSVYWLKNGEPVGHTETTLRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAPYVRKMLPMKVVAGKSMFVTCPVAGYPISSVTWEKDGRQLPFNDRQTVYRN------------------------------GTLAISNV--------------QRKEDASTYTCVARNDE---------GYSARSDLTVTVM---EPPAIV--PFSFGKDVINEGDFAQVMCSISRGDEPL---LRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIG-GISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFGSDDTSINLIIQEKPETPYGLKVVDKTGRTVKLSWQAPYNGNSNLTRYVIEFKPIKGTWANDVDHVLVPGDQTMAGVFSLRPATSYHFRVVAQNDIGVS----------------GPSDTVTIETAEE----APSGPP-------------VDIRVAAVD----------------QHTLRMGQ-------------------GPMSDEVLVHTAEGAPTQPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVYGPSKTWYDPSTRNTKVSTDNEAELTSLKKYTNYTVQVLAFTNGGDGVKSEVLTSTTEQDIPGPPSSVKALAMSEEAILVSWQYPEEPNGKIIQYTVYIKELD-RSRDIAPKTNKVNALQMSHQVDNLNKKARYEFWVTAHTTIGEGSPSIKVTLSPTNRIPAKIASFDDDFVAMVKQDVKLPCIAVGSPNPQLHWKMRGQPIPKNDRIRQLPDGSLQITRVLKEDTGKYVCMVNNKYGQDMVTHELVVNGPPDPPEVTITSQTTDTITVKLKTSNPEDKTPVHGYILHYKPEFGDWNTAQIPFGSDEFTLDSLLCGQRYHLYVTAHNSIGVGPKSTQLTANTKGVEPTVPEAHRFLEVSAGSVTLHLNAWMDGGCPILYFVVEYKPRHHQDWTLVSNSVKAGGNFVVLDLNPATWYNLRVTAHNNAGFSVAEYEFATLTVTGGTIAP 1574
VV Q Y EA NEYVI GNSA+ KC++PSFVAD V + W+ +G + S S NYDGKY+VLPSGEL IR+V P+DG+K+Y+CRTKHRLTGET+LSAT G+LVITEP ++ PK S +K +GG I ++C G+P+P+FRWYKF++ K+ V LDDRVKQV GTLIIKEA+V+DSGKYLC+VNNSVGGESVETVLTVTAPL+ +EP Q VD+GR A F C+++GNP+K + WLK+G+ + H ++ LRI SVKKED+GMYQCF+RNDQE+AQA+ ELKLGGRF+PP+ AF T QPGP V LKC+A G+P PE+ W + G + + LQVG + + NGDVVS+LNIS T GG Y+C ASSKVG V H+AKLNV G P++R M +VAG+++ VTCPVAGYPI ++ WE+DGR LP N +Q V+ N GTL + + + + ++T TC D+ R D+ VTV+ + +I+ P + + A+ +++ L + PRW +EPTDK FAQGSDAK++CKADGFP+P++TWK+A + TP DY+D N+ NIK+ DG+L I NI+K NEGYYLC+A NGIG G+SAV I+VQAPP FEIK R QTA E TVLQCEA+GEKPIGI WNMNNKRLD D RYT+REE +G+LS +SIK+T+R DSALFTC ATNAFG DDTSINLIIQE PE PYGL+V+DK+GR+V+LSW APY+GNS + RY+IE+K +GTW D+D VLVPG QT+AGVF+LRPAT+YH R+VA+N+IG S GP V +E ++ PP V ++A+ D +H L++G+ GPMS+E +TAEG P QPP + TTL+SQ I+V+W SPPL +ANG+IKGYKVVYGPS WYD +T++TK+++ +E L LKKYTNY++QVLAFT+GGDGV+S + TEQD+P PS+VKAL MS ++ILVSW+ PE+PNG + QYTVY++E ++D PK KV QMS + L KK RYEFWVTA T IGEG PS V+LSP++R+PAKIASFDD F A K+DVKLPC+AVG P P + WK++G ++DRIRQLP+GSL I V ++D G+Y C V N +G D VTH+LVV+ PP P+V++TS TT++IT+KL+ +P D P+HGY +HYKPEFGDW T Q+ + ++TL++L CG RY +YVT +N IG G S L TKG +P +PEA RF+EVS S+TLHL+AW DGGCP++YFVVE+K + H +W VSN+VK GGNFVVLDL+PA WY+LRVTAHNNAGF+VAEYEFATLTVTGGTIAP
Sbjct: 125 VVAQFYVTEAENEYVIRGNSAVMKCKIPSFVADFVSVESWVADDGQTLTYSTTSDNYDGKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPTSNIAPK-------SPGKKYEGGEIMYSPAGQRVFMSCQVVGFPVPLFRWYKFVDGTMRKQAVTLDDRVKQVSGTLIIKEARVEDSGKYLCVVNNSVGGESVETVLTVTAPLAANIEPTTQTVDFGRPAVFTCNFEGNPIKMISWLKDGKSLSHEDSVLRIESVKKEDKGMYQCFIRNDQENAQASAELKLGGRFEPPQIRQAFKEETLQPGPSVFLKCIALGNPTPEITWELDGKKLSNSDRLQVGQYVTVNGDVVSHLNISSIHTNDGGLYKCIASSKVGSVEHAAKLNVFGLPFIRPMEKKAIVAGETLIVTCPVAGYPIETIVWERDGRVLPINRKQKVFPNGTLIIENVERLSDQATYTCVARNAQGYSARGTLEVQVMVPPEIVPFTFGDKPRSEGQSATVTCAVDGDKPVGVQWMLNDKEIRGDMNVTVIPLGDAGSIIAIPHVTAQHMGQYTCIAKNSAGVTKHTAQLAVTVPPRWILEPTDKAFAQGSDAKVECKADGFPRPQVTWKRAAGD------TPGDYKDLKP-NNPNIKVEDGTLTINNIQKTNEGYYLCEAVNGIGSGLSAVILISVQAPPHFEIKLRNQTARRGEPTVLQCEARGEKPIGIRWNMNNKRLDPKTDTRYTMREEILPNGVLSDLSIKQTERTDSALFTCEATNAFGIDDTSINLIIQEVPEVPYGLRVLDKSGRSVQLSWAAPYDGNSPIKRYLIEYKIARGTWEADIDRVLVPGQQTVAGVFNLRPATTYHLRIVAENEIGTSEPSDTVPIITAEEAPGGPPTAVKVEAEDQHKLKISWKPPERDQWNGEILGYYVGYKLASSDKPYLFETVEFSKEEGKEHHLQVGELKTYTQYSVVVQAFNKVGPGPMSEETRQYTAEGIPEQPPQDTTCTTLTSQTIRVSWVSPPLTAANGIIKGYKVVYGPSDAWYDENTKDTKITSSSETILHGLKKYTNYSMQVLAFTSGGDGVRSAPIHCQTEQDVPEAPSAVKALVMSGDSILVSWKPPEQPNGIVSQYTVYVREDSAEAKDEKPKLTKVPPFQMSFEASELKKKERYEFWVTASTIIGEGQPSKSVSLSPSSRVPAKIASFDDSFSATYKEDVKLPCLAVGIPAPDIQWKVKGVAFQQDDRIRQLPEGSLFIKSVTRQDAGEYSCSVENSFGHDTVTHQLVVHAPPHSPQVSLTSMTTNSITMKLR-PHPTDTAPLHGYTVHYKPEFGDWETVQVSNQAQKYTLENLWCGSRYQVYVTGYNGIGTGDPSDILNTRTKGSKPVIPEAGRFIEVSTNSITLHLSAWSDGGCPMIYFVVEHKKKLHTEWNQVSNNVKPGGNFVVLDLDPANWYHLRVTAHNNAGFAVAEYEFATLTVTGGTIAP 1595 HSP 2 Score: 702.975 bits (1813), Expect = 0.000e+0 Identity = 492/1332 (36.94%), Postives = 670/1332 (50.30%), Query Frame = 0
Query: 19 QSDTNGPVFIQEPPNQMDFSNTTGTEIICQSRGTPMPQITWVKGDGSIVQDVPGLRKVMANGNLVLPPFRAEDYNQEVHAQTYRCIAENTLGKVQSRDVQVRAVVHQSYDVYVEMEHVIMGNDVLFKCKIPSYVTDLVQVLDWVESHGNSL---KTAPN----FVVIQPFE---TDVG-----KEYVILGNDALMKCSIPSFVADQLEVVSWHGSDGSEIRPGQIH----VVYQPYQQEASNEYVIVGNSALFKCEVPSFVADVVDLVGWIDSEGTSFDRSQHSNYDGKYVVLPSGELQIRNVSPDDGFKTYKCRTKHRLTGETKLSATAGKLVITEPLASGKPKFSSIVKLSAFQKTQGGNIAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDDRVKQVGGTLIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVTA---PLSVEVEPKQQVVDYGRSATFKCHYDGNPVKSVYWLKNGEPVGHTE---------------TTLRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDG-VLQVGSFNS--DNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAPYVRKMLPMKVV----------AGKSMFVTCPVAGYPISSVTWEKDGRQLPFNDRQTVYRNG----TLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIG-GISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFGSDDTSINLIIQEKPETPYGLKVVDKTGRTVKLSWQAPYNGNSNLTRYVIEFKPIKGTWANDVDHVLVPGDQTMAGVFSLRPATSYHFRVVAQNDIGVSGPSDTVTIETAEEAPSGPPVDIRVAAVDQHTLRMGQGPMSDEVLVHTAEGAPTQPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVYGPSKT----WYDPSTRNTKVSTDNEAELTSLKKYTNYTVQVLAFTNGGDGVKSEVLTSTTEQDIP-GPPSSVKALAMSEEAILVSWQYP--EEPNGKIIQYTVYIKELDRSRDIAPKTNKVNALQMSHQVDNLNKKARYEFWVTAHTTIGEGSPSIKVTLSPTNRIP 1288
+ DT GPV+I+EPPN++DFSNTTG + C +RG P+P+I WV+ DG+ V DVPGLR+V+ NGNLV PPFRAEDY QEVHAQ Y C+A N++G + SRDV VRAVV Q Y E E+VI GN + KCKIPS+V D V V WV G +L T+ N ++V+ E DVG K Y L + S +L V++ S+ + PG+ + ++Y P G C+V F + ++D GT R Q D + V SG L I+ +D K Y C + + GE+ + L +T PLA+ + V G TC +G PI + W K + K ++ +D V L I+ K +D G Y C + N L + P + K++ + G S KC GNP + W +G+ + +++ + L I+S+ D G+Y+C + S + +L + G F+ + G + + C G P + W E DG VL + NG ++ N+ R TY C A + G +SA+ G V+ M+P ++V G+S VTC V G V W + +++ + TV G +AI +V + YTC+A+N G + + AQ+ ++ PRW +EPTDK FAQGSDAK++CKADGFP+P++TWK+A + TP DY+D N+ NIK+ DG+L I NI+K NEGYYLC+A NGIG G+SAV I+VQAPP FEIK R QTA E TVLQCEA+GEKPIGI WNMNNKRLD D RYT+REE +G+LS +SIK+T+R DSALFTC ATNAFG DDTSINLIIQE PE PYGL+V+DK+GR+V+LSW APY+GNS + RY+IE+K +GTW D+D VLVPG QT+AGVF+LRPAT+YH R+VA+N+IG S PSDTV I TAEEAP GPP ++V A DQH L K++W P NG I GY V Y + + ++ + + ++ ++ LK YT Y+V V AF G G SE T + IP PP ++ + I VSW P NG I Y V D D K K+ + + + L K Y V A T+ G+G S + +P
Sbjct: 22 EDDTAGPVYIREPPNRVDFSNTTGAVVECSARGNPVPEIIWVRSDGTAVGDVPGLRQVLPNGNLVFPPFRAEDYRQEVHAQVYVCLARNSVGTIHSRDVNVRAVVAQFYVTEAENEYVIRGNSAVMKCKIPSFVADFVSVESWVADDGQTLTYSTTSDNYDGKYLVLPSGELHIRDVGPEDGYKSYQCRTKHRLTGETRLSATKGRL-VITEPTSNIAPKSPGKKYEGGEIMYSP-----------AGQRVFMSCQVVGFPVPLFRWYKFVD--GTM--RKQAVTLDDR-VKQVSGTLIIKEARVEDSGK-YLCVVNNSVGGESVETV----LTVTAPLAANIEPTTQTVDF-------GRPAVFTCNFEGNPIKMISWLK------DGKSLSHEDSV------LRIESVKKEDKGMYQCFIRNDQENAQASAELKLGGRFEPPQIRQAFKEETLQPGPSVFLKCIALGNPTPEITWELDGKKLSNSDRLQVGQYVTVNGDVVSHLNISSIHTNDGGLYKCIASSKVGSVEHAAKLNVFGL----PFIRPMEKKAIVAGETLIVTCPVAGYPIETIVW-------ERDGRVLPINRKQKVFPNGTLI-IENVE--RLSDQATYTCVARNAQG---YSAR----GTLEVQVMVPPEIVPFTFGDKPRSEGQSATVTCAVDGDKPVGVQWMLNDKEIRGDMNVTVIPLGDAGSIIAIPHVT-AQHMGQYTCIAKNSAGVTKHT---------------------------AQLAVTVP--------PRWILEPTDKAFAQGSDAKVECKADGFPRPQVTWKRAAGD------TPGDYKDLKP-NNPNIKVEDGTLTINNIQKTNEGYYLCEAVNGIGSGLSAVILISVQAPPHFEIKLRNQTARRGEPTVLQCEARGEKPIGIRWNMNNKRLDPKTDTRYTMREEILPNGVLSDLSIKQTERTDSALFTCEATNAFGIDDTSINLIIQEVPEVPYGLRVLDKSGRSVQLSWAAPYDGNSPIKRYLIEYKIARGTWEADIDRVLVPGQQTVAGVFNLRPATTYHLRIVAENEIGTSEPSDTVPIITAEEAPGGPPTAVKVEAEDQHKL-------------------------------------KISWKPPERDQWNGEILGYYVGYKLASSDKPYLFETVEFSKEEGKEHHLQVGELKTYTQYSVVVQAFNKVGPGPMSEETRQYTAEGIPEQPPQDTTCTTLTSQTIRVSWVSPPLTAANGIIKGYKVVYGPSDAWYDENTKDTKITSSSET-ILHGLKKYTNYSMQVLAFTSGGDGVRSAPIHCQTEQDVP 1210 HSP 3 Score: 124.02 bits (310), Expect = 3.182e-24 Identity = 125/328 (38.11%), Postives = 160/328 (48.78%), Query Frame = 0
Query: 1636 GTIAPPFGKDTKATQAGFPGLPDWLDLDIIVPVVATVIVICVGILVVCVALTRRKHPPPLMHPEEYAQYYGQMNTNGRMMTMKHDGLPYEEMGYCPPPNRKLPPVPGTHSNYNTIDRIKNGHKTKGAGAYATYDRRNKGEGPQYDEIPYGDVGLAANGQSGKGQLPQIPDDYSQVPHVPARQVGGSIANGDEDISPYATFHLLGMREENKGGPNPA-NFQTLPPGAGGAQT-----GPNTPA----------RHLSQTM---NPRRS-IANPGGPMQ----PALYDSVNCDYEPGTYQAPQNQNFGNPYDCPEGMYGGSMVSSVGYSK 1939
GTIAPP + T Q FP +P+WLDL+I+VP+ ATV+VI VG++V+CVAL+RR P + Y N M + D +E+GY PPNRKLPPVPG SNYNT DRIK GH + ++AT+D R+ Y+E+ G+ ++P P V H A +++I PYATFHLLG REE PN A FQT P G +T GP P R SQ+M N R S +AN G P D NC E Y + Q +G PYD G G SVG ++
Sbjct: 1591 GTIAPPEQEHTSVNQY-FPWVPEWLDLNIVVPIGATVVVIIVGVVVICVALSRRSRGPEQTRLRDDVAYNQSAGGNSTMDKRRPD--LRDELGYIAPPNRKLPPVPG--SNYNTCDRIKRGH-SGSFRSHATWDPRHPRH--MYEELSLHPPGIR--------RIPAHPGSDETVYHR---------AGMEDEICPYATFHLLGFREEMD--PNKAMQFQTFPHQNGHERTHSGTIGPMGPGGVAGNGHIHQRSGSQSMPRANGRYSRVANQNGAANFAPGPEYDDPANCAPEEDQYGSQYGQ-YGAPYDH-YGSRGSVSRRSVGSAR 1889
BLAST of down syndrome cell adhesion molecule isoform x1 vs. nr
Match: gi|1032018726|ref|XP_016767044.1| (PREDICTED: Down syndrome cell adhesion molecule isoform X48 [Apis mellifera]) HSP 1 Score: 1273.07 bits (3293), Expect = 0.000e+0 Identity = 676/1336 (50.60%), Postives = 850/1336 (63.62%), Query Frame = 0
Query: 18 AQSDTNGPVFIQEPPNQMDFSNTTGTEIICQSRGTPMPQITWVKGDGSIVQDVPGLRKVMANGNLVLPPFRAEDYNQEVHAQTYRCIAENTLGKVQSRDVQVRAVVHQSYDVYVEMEHVIMGNDVLFKCKIPSYVTDLVQVLDWVESHGNSLKTA---PNFVVIQPFETDVGKEYVILGNDALMKCSIPSFVADQLEVVSWHGSDG-SEIRPGQIHVVYQPYQQEASNEYVIVGNSALFKCEVPSFVADVVDLVGWIDSEGTSFDRSQHSNYDGKYVVLPSGELQIRNVSPDDGFKTYKCRTKHRLTGETKLSATAGKLVITEPLASGKPKFSSIVKLSAFQKTQGGNIAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDDRVKQVGGTLIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVTAPLSVEVEPKQQVVDYGRSATFKCHYDGNPVKSVYWLKNGEPVGHTETTLRINSVKKEDRGMYQCFVRNDQESAQATGELKLGGRFDPPEFVSAFDAVTTQPGPMVSLKCVAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAPYVRKMLPMKVVAGKSMFVTCPVAGYPISSVTWEKDGRQLPFNDRQTVYRNGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLL--------------RPRWTVEPTDKQFA-------QGSDA-------------------------------------------KIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIG-GISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEAKGEKPIGILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFGSDDTSINLIIQEKPETPYGLKVVDKTGRTVKLSWQAPYNGNSNLTRYVIEFKPIKGTWANDVDHVLVPGD-QTMAGVFSLRPATSYHFRVVAQNDIGVSGPSDTVTIETAEEAPSGPPVDIRVAAVDQHTLRMGQGPMSDEVLVHTAEGAPTQPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVYGPSKT----WYDPSTRNTKVSTDNEAELTSLKKYTNYTVQVLAFTNGGDGVKSEVLTSTTEQDIP-GPPSSVKALAMSEEAILVSWQYP--EEPNGKIIQYTVYIKELDRSRDIAPKTNKVNALQMSHQVDNLNKKARYEFWVTAHTTIGEGSPS 1276
A+ ++ GPVF++EPPN++DFSN TG + CQ+RG P P I WV+ DGS V DVPGLR+V+ NGNLV PPFRAEDY QEVHAQ Y C+A + G V SRDV VRAVV Q Y+ V E V+ GN KC +PS+V D V V++W+ S +A VV Q FE V ++ I GN A+ KC +PSFVAD ++VV W S+G S + GQ +VV Q Y +E+V+ GN+A+ KC +PSFVA+ V++ WI+ E T S ++YDGKY+VLPSGEL IR+V P+DG+KTY+CRTKHRLTGET+LSAT G+LVITEP+ KP+ +S K G + + CPAQG+P+P FRWYKF+E ++ ++ V L++RV+QV GTLII+EA+V+DSGKYLC+VNNSVGGESVETVLTVTAPL E+EP Q +D+GR ATF C+ GNP+K+V WLK+G+P+G E LRI SVKKED+GMYQCFVRNDQESAQAT ELKLGGRF+PP+ AF T QPGP + LKCVA G+P PE+ W + G + LQVG + + NGDVVS+LNIS T GG Y+C A+SKVG HSA+LNV G P++R M +VAG+++ VTCPVAGYPI S+ WE+D R LP N +Q V+ NGTL I NV+R D +TYTCVARN +GYSAR L V VM P I PFS G + N G+ +C+I +GD P+ RP T+ T K+ + GS A +++CKADGFPKP++TWKKA + TP DY D SN +I + DG+L I NI+K NEGYYLC+A NGIG G+SAV I+VQAPP FEIK + QTA E VLQCEA+GEKPIGILWNMNNKRLD D RYTIREE +G+LS +SIKRT+R DSALFTCVATNAFGSDDTSIN+I+QE PE PYGLKV+DK+GR+V+LSW APY+GNS + RYVIE+K KG+W D+D VLVPG Q +AGVF+LRPAT+YH R+VA+N+IG S PSDTVTI TAEEAPSGPP IRV +DQHTL KVTW PP NG I GY V Y S + ++ + + ++ ++ +LK YT Y+V V AF G G SE T + +P PP ++ + I +SW P NG I Y V D D K K+ + + + L K Y V A T+ G+G S
Sbjct: 33 AEDESMGPVFVKEPPNRVDFSNGTGAVVECQARGNPQPDIIWVRADGSAVGDVPGLRQVLPNGNLVFPPFRAEDYRQEVHAQVYSCLARSPAGSVHSRDVNVRAVVQQFYETRVIDEFVLRGNTATLKCLVPSFVADFVDVIEWLAVEDGSTYSANSQEEKVVAQYFEVQVYDQFAIRGNAAIFKCQVPSFVADHVDVVGWIDSNGGSYVADGQSYVVGQRYAVNVMDEHVLRGNAAIIKCHIPSFVAEFVEVDSWIEDETTEIYPS--TDYDGKYLVLPSGELHIRDVGPEDGYKTYQCRTKHRLTGETRLSATKGRLVITEPVNGAKPRVASTSKYDVLTSHADGPVTMLCPAQGHPLPAFRWYKFIEGSSRRQPVQLNERVRQVSGTLIIREARVEDSGKYLCIVNNSVGGESVETVLTVTAPLGAEIEPSTQTIDFGRPATFTCNVRGNPIKTVSWLKDGKPLGLEEAVLRIESVKKEDKGMYQCFVRNDQESAQATAELKLGGRFEPPQIRQAFAEETLQPGPSMFLKCVASGNPTPEITWELDGKRLSNTERLQVGQYVTVNGDVVSHLNISSTHTNDGGLYKCIAASKVGSAEHSARLNVYGLPFIRHMDKKAIVAGETLRVTCPVAGYPIESIVWERDTRVLPINRKQKVFPNGTLIIENVERMSDQATYTCVARNAQGYSARGTLEVQVMVAPQIAPFSIGDEPANWGEAVSAVCTIVKGDLPIELAWALNGEPISANDRPDITISSTGKRVSLMTIEAVSGSHAGEYTCTASNAAGATSYSATLAVNVPPRWILEPTDKAFAQGSDARVECKADGFPKPQVTWKKAAGD------TPGDYTDLKLSNP-DISVEDGTLSINNIQKTNEGYYLCEAVNGIGAGLSAVIFISVQAPPHFEIKLKNQTARRGEPAVLQCEAQGEKPIGILWNMNNKRLDPKSDSRYTIREEILANGVLSDLSIKRTERSDSALFTCVATNAFGSDDTSINMIVQEVPEVPYGLKVLDKSGRSVQLSWAAPYDGNSPIKRYVIEYKISKGSWETDIDRVLVPGSQQNVAGVFNLRPATTYHLRIVAENEIGASDPSDTVTIITAEEAPSGPPTSIRVDDLDQHTL-------------------------------------KVTWKPPPREDWNGEILGYYVGYRLSSSEKPYMFETVDFSKEDGKEHHLQIMNLKTYTQYSVVVQAFNKVGSGPMSEERRQHTAEGVPEQPPHDTTCTTLTSQTIRISWMSPPLSAANGVITGYKVIYGPSDTWYDENTKDTKITSSSET-ILHGLKKYTNYSMQVLAFTSGGDGVKS 1321 HSP 2 Score: 729.939 bits (1883), Expect = 0.000e+0 Identity = 500/1415 (35.34%), Postives = 717/1415 (50.67%), Query Frame = 0
Query: 238 EASNEYVIVGNSALFKCEVPSFVADVVDLVGWIDSEGTSFDRSQHSNYDGKYVVLPSGELQIRNVSPDDGFKTYKCRTKH-----RLTGETKLSATAGKLVITEPLASGKPKFSSIVKLSAFQKTQGGNIAVTCPAQGYPIPVFRWYKFMESNNNKKLVALDDRVKQVGGT---LIIKEAKVDDSGKYLCMVNNSVGGESVETVLTVTAPLSVEVEPKQQVVDYGRSATFKCHYDGNPVKSVYWLKNGE--PVGHTET-----TLRINSVKK-EDRGMYQCFVRNDQ-ESAQATGELKLGGRFDPPEFVSAFDAVTTQP---GPMVSLKC-VAKGDPAPEVKWFIYGSEAESDGVLQVGSFNSDNGDVVSYLNISQARTKYGGTYECQASSKVGLVSHSAKLNVNGAP-YVRKMLPMKVVAGKSMFVTCPVAGYPISSVTWEK-------DGRQLPFNDRQTVYRNGTLAISNVQRKEDASTYTCVARNDEGYSARSDLTVTVMEPPAIVPFSFGKDVINEGDFAQVMCSISRGDEPLLRPRWTVEPTDKQFAQGSDAKIDCKADGFPKPEITWKKAVVNNLQMRPTPNDYQDFDASNDRNIKIIDGSLIIKNIKKGNEGYYLCKASNGIGGISAVAKIAVQAPPSFEIKKRTQTALISENTVLQCEAK---GEKPIG---ILWNMNNKRLDTNVDPRYTIREESQEDGMLSTISIKRTQREDSALFTCVATNAFGSDDTSINLIIQEKPETPYG----LKVVDKTGRTVKLSWQAP--YNGNSNLTRYVIEFK---PIKGTWANDVDHVLVPGDQTMAGVFSLRPATSYHFRVVAQNDIGVSGPSDTVTIETAEEAPSGPPVDIRVAAVDQHTLRMGQGPMSDEVLVHTAEGAPTQPPAEVIITTLSSQAIKVTWSSPPLASANGVIKGYKVVYGPSKTWYDPSTRNTKVSTDNEAELTSLKKYTNYTVQVLAFTNGGDGVKSEVLTSTTEQDIPGPPSSVKALAMSEEAILVSWQYPEEPNGKIIQYTVYIKELDRSRDIAPKTNKVNALQMSHQVDNLNKKARYEFWVTAHTTIGEGSPSIKVTLSPTNRIPAKIASFDDDFVAMVKQDVKLPCIAVGSPNPQLHWKMRGQPIPKNDRIRQLPDGSLQITRVLKEDTGKYVCMVNNKYGQDMVTHELVVNGPPDPPEVTITSQTTDTITVKLKTSNPEDKTPVHGYILHYKPEFGDWNTAQIPFGSDEFTLDSLLCGQRYHLYVTAHNSIGVGPKSTQLTANTKGVEPTVPEAHRFLEVSAGSVTLHLNAWMDGGCPILYFVVEYKPRHHQDWTLVSNSVKAGGNFVVLDLNPATWYNLRVTAHNNAGFSVAEYEFATLTVTGGTIAPVREIDGSGSSAGDGRNPFEESLMYFLTNVNLVVP 1608
E S + + G A F C V + + V W+ DGK + L L+I +V +D Y+C ++ + T E KL G+ EP P+ Q G ++ + C A G P P W + +N + + + V G L I +D G Y C+ + VG L V + K+ +V G + C G P++S+ W ++ P+ + TL I +V++ D+ Y C RN Q SA+ T E+++ P+ ++ F ++ +P G VS C + KGD E+ W + G ++ + S G VS + I + G Y C AS+ G S+SA L VN P ++ + G V C G+P VTW+K D L ++ +GTL+I+N+Q K + Y C A N G + + ++V PP + ++ ++ +G A + C+A G I W +NN ++ P + N + D L IK ++ + + C A+N G + VQ P E+ + S +V A G PI I + ++ +T++D R + Q + + T VA N G+ D S + I E P G ++V D T+K++W+ P + N + Y + ++ K VD G + + +L+ T Y V A N ++G GPMS+E HTAEG P QPP + TTL+SQ I+++W SPPL++ANGVI GYKV+YGPS TWYD +T++TK+++ +E L LKKYTNY++QVLAFT+GGDGVKS + TEQD P P ++KAL MS E+ILVSW+ P +PNG I QYTVY K D + + P + KV Q++H+ L+K RY+FWVTA T IGEG S V L+P+ R+PAKIASFDD F A K+DVKLPC+AVG P P++ WK+RG + +DR+RQLP+GSL I V + D G+Y C V N +G D VTH+L+V+ PP P++T+T+ TT+++T+K++ +P D P+HGY +HYKPEFGDW+TAQI ++TL++LLCG RY +YVTA+N IG G S L TKG +P +PEA RF+EV+ S+TLHLNAW DGGCP++YFVVE+K ++ Q+W VSN+VK GGNFVVLDL PATWY+LRVTAHNNAGF+VAEYEFATLTVTGGTIAP RE+ D E+ + F+ N+NLVVP
Sbjct: 462 EPSTQTIDFGRPATFTCNVR---GNPIKTVSWLK--------------DGKPLGLEEAVLRIESVKKEDK-GMYQCFVRNDQESAQATAELKL---GGRF---EP-----PQIRQAFAEETLQP--GPSMFLKCVASGNPTPEITWELDGKRLSNTERLQVGQYVTVNGDVVSHLNISSTHTNDGGLYKCIAASKVGSAEHSARLNVYGLPFIRHMDKKAIV-AGETLRVTCPVAGYPIESIVWERDTRVLPINRKQKVFPNGTLIIENVERMSDQATYTCVARNAQGYSARGTLEVQV---MVAPQ-IAPF-SIGDEPANWGEAVSAVCTIVKGDLPIELAWALNGEPISANDRPDITI--SSTGKRVSLMTIEAVSGSHAGEYTCTASNAAGATSYSATLAVNVPPRWILEPTDKAFAQGSDARVECKADGFPKPQVTWKKAAGDTPGDYTDLKLSNPDISVEDGTLSINNIQ-KTNEGYYLCEAVNGIGAGLSAVIFISVQAPP----------------------------------HFEIKLKNQTARRGEPAVLQCEAQGEKPIGILWN---MNNKRLDPKSDSRYTIREEILANGVLSD--LSIKRTERSDSALFTCVATNAFGSDDTSINMIVQEVP--EVPYGLKVLDKSGRSVQLSWAAPYDGNSPIKRYVIEYKISKGSWETDID-RVLVPGSQQNVAGVFNLRPATTYH-----LRIVAENEIGASDPSDTVTIITAEEAPSGPPTSIRVDDLDQHTLKVTWKPPPREDWNGEILGYYVGYRLSSSEKPYMFETVDFSKEDGKEHHLQIMNLKTYTQYSVVVQAFN-------------------------------------KVGSGPMSEERRQHTAEGVPEQPPHDTTCTTLTSQTIRISWMSPPLSAANGVITGYKVIYGPSDTWYDENTKDTKITSSSETILHGLKKYTNYSMQVLAFTSGGDGVKSAPIHCQTEQDAPEAPIAIKALVMSSESILVSWRPPSQPNGVITQYTVYTKA-DNAEE--PTSQKVPPNQLTHEASELDKTRRYDFWVTASTNIGEGEASKIVALAPSVRVPAKIASFDDKFTATYKEDVKLPCLAVGVPAPEVTWKVRGAVLQSSDRLRQLPEGSLFIKEVDRTDAGEYSCYVENTFGHDTVTHQLIVHAPPHSPQITLTATTTNSLTMKVR-PHPTDNAPIHGYTIHYKPEFGDWDTAQISSTVQKYTLENLLCGSRYQIYVTAYNGIGTGDPSDMLNTRTKGSKPIIPEAARFIEVATNSITLHLNAWSDGGCPMIYFVVEHKKKNQQEWNQVSNNVKPGGNFVVLDLVPATWYHLRVTAHNNAGFAVAEYEFATLTVTGGTIAPARELPDVNGGGND-----EDPMKIFMANLNLVVP 1743 HSP 3 Score: 83.1889 bits (204), Expect = 7.890e-12 Identity = 81/242 (33.47%), Postives = 105/242 (43.39%), Query Frame = 0
Query: 1705 YGQMNTNGRMMTMKHDGLPYEEMGYCPPPNRKLPPVPGTHSNYNTIDRIKNGHKTKGAG---AYATYDRRNKGEGPQYDEIPYGDVGLAANGQSGKGQLPQIPDDYSQVPHVPARQVGGSIANGDEDISPYATFHLLGMREENKGGPNPA-NFQTLP-PGAG---------GAQTGPNTPARHLSQTMNPRRS-----IANPGGP------MQPALYDSVNCDYEPGTYQAPQNQNFGNPYD 1921
Y Q G + + L +E+GY PPNRKLPPVPG SNYNT DRIK G G G +++T+D R Y+E+ + G G S +++I PYATFHLLG REE P+ A FQT P PG G G T + +R SQ+M PR++ + + GG P D NC E Y + Q +G PYD
Sbjct: 1775 YQQTGVGGATLDKRRPDL-RDELGYIAPPNRKLPPVPG--SNYNTCDRIKRGTVISGTGSIRSHSTWDPRRH----MYEELNHCAPNRRCPPPPRMGSAE-----------------GLSHRGMEDEICPYATFHLLGFREEMD--PSKAMQFQTFPHPGNGHSGTMGPPVGHPTNASAHSRSGSQSM-PRQNGRYSRVPSQGGGSGTHNVFSPEYDDPANCAPEEDQYGSQYGQ-YGAPYD 1988 The following BLAST results are available for this feature:
BLAST of down syndrome cell adhesion molecule isoform x1 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 25
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BLAST of down syndrome cell adhesion molecule isoform x1 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of down syndrome cell adhesion molecule isoform x1 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
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The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold61_size441589:470..38323- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold61_size441589-snap-gene-0.14 ID=maker-scaffold61_size441589-snap-gene-0.14|Name=down syndrome cell adhesion molecule isoform x1|organism=Tigriopus kingsejongensis|type=gene|length=37854bp|location=Sequence derived from alignment at scaffold61_size441589:470..38323- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'down syndrome cell adhesion molecule isoform x1' has the following synonyms
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