40s ribosomal protein s11, maker-scaffold626_size122949-snap-gene-0.26 (gene) Tigriopus kingsejongensis

Overview
Name40s ribosomal protein s11
Unique Namemaker-scaffold626_size122949-snap-gene-0.26
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of 40s ribosomal protein s11 vs. L. salmonis genes
Match: EMLSAG00000008508 (supercontig:LSalAtl2s:LSalAtl2s524:158939:159254:-1 gene:EMLSAG00000008508 transcript:EMLSAT00000008508 description:"augustus_masked-LSalAtl2s524-processed-gene-1.11")

HSP 1 Score: 140.969 bits (354), Expect = 1.709e-44
Identity = 65/77 (84.42%), Postives = 72/77 (93.51%), Query Frame = 0 
Query:  103 MNRTVVIRRDYLHYIKKYNRFEKRHKNISVHLSPCFRDVQVGDVLTVGECRPLSKTVKFNTLKVNKAAGCKKSFSKF 179
            M  T VIRRDYLHY+KKYNRFEKRHKN+SVHLSPCFRDVQ+GDVLTVGECRPLSKTVKFNTLKVNK++G KK+F K+
Sbjct:    1 MKNTCVIRRDYLHYVKKYNRFEKRHKNMSVHLSPCFRDVQIGDVLTVGECRPLSKTVKFNTLKVNKSSGNKKTFRKY 77
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BLAST of 40s ribosomal protein s11 vs. SwissProt
Match: gi|47117088|sp|P61270.3|RS11_MACFA (RecName: Full=40S ribosomal protein S11 >gi|50403609|sp|P62280.3|RS11_HUMAN RecName: Full=40S ribosomal protein S11; AltName: Full=Small ribosomal subunit protein uS17 >gi|54039305|sp|P62282.3|RS11_RAT RecName: Full=40S ribosomal protein S11 >gi|54039310|sp|P62281.3|RS11_MOUSE RecName: Full=40S ribosomal protein S11 >gi|108860952|sp|Q3T0V4.3|RS11_BOVIN RecName: Full=40S ribosomal protein S11)

HSP 1 Score: 228.409 bits (581), Expect = 1.733e-76
Identity = 110/154 (71.43%), Postives = 126/154 (81.82%), Query Frame = 0 
Query:   31 DTERGFQKQHNVFLSKKGGL-----KKSEARWTANPGLGFKIPVEAREGSYIDKKCPFTGKVSIRGRVLTGVITKMKMNRTVVIRRDYLHYIKKYNRFEKRHKNISVHLSPCFRDVQVGDVLTVGECRPLSKTVKFNTLKVNKAAGCKKSFSKF 179
             TER +QKQ  +F +KK  L     K+   R+  N GLGFK P EA EG+YIDKKCPFTG VSIRGR+L+GV+TKMKM RT+VIRRDYLHYI+KYNRFEKRHKN+SVHLSPCFRDVQ+GD++TVGECRPLSKTV+FN LKV KAAG KK F KF
Sbjct:    5 QTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKVTKAAGTKKQFQKF 158
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BLAST of 40s ribosomal protein s11 vs. SwissProt
Match: gi|325530310|sp|Q9XSU4.2|RS11_CANFA (RecName: Full=40S ribosomal protein S11)

HSP 1 Score: 226.098 bits (575), Expect = 1.435e-75
Identity = 109/153 (71.24%), Postives = 125/153 (81.70%), Query Frame = 0 
Query:   32 TERGFQKQHNVFLSKKGGL-----KKSEARWTANPGLGFKIPVEAREGSYIDKKCPFTGKVSIRGRVLTGVITKMKMNRTVVIRRDYLHYIKKYNRFEKRHKNISVHLSPCFRDVQVGDVLTVGECRPLSKTVKFNTLKVNKAAGCKKSFSKF 179
            TER +QKQ  +F +KK  L     K+   R+  N GLGFK P EA EG+YIDKKCPFTG VSIRGR+L+GV+TKMKM RT+VIRRDYLHYI+KYNRFEKRHKN+SVHLSPCFRDV +GD++TVGECRPLSKTV+FN LKV KAAG KK F KF
Sbjct:    6 TERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVHIGDIVTVGECRPLSKTVRFNVLKVTKAAGTKKQFQKF 158
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BLAST of 40s ribosomal protein s11 vs. SwissProt
Match: gi|730626|sp|P41115.1|RS11_XENLA (RecName: Full=40S ribosomal protein S11)

HSP 1 Score: 224.172 bits (570), Expect = 8.647e-75
Identity = 109/153 (71.24%), Postives = 125/153 (81.70%), Query Frame = 0 
Query:   32 TERGFQKQHNVFLSKKGGL-----KKSEARWTANPGLGFKIPVEAREGSYIDKKCPFTGKVSIRGRVLTGVITKMKMNRTVVIRRDYLHYIKKYNRFEKRHKNISVHLSPCFRDVQVGDVLTVGECRPLSKTVKFNTLKVNKAAGCKKSFSKF 179
            TER +QKQ  +F +KK  L     K+   R+  + GLGFK P EA +G+YIDKKCPFTG VSIRGR+L+GV+TKMKM RT+VIRRDYLHYI+KYNRFEKRHKN+SVHLSPCFRDVQVGD +TVGECRPLSKTV+FN LKV KAAG KK F KF
Sbjct:    6 TERAYQKQPTIFQNKKRVLEGETGKEKLPRYYRSVGLGFKTPREAIDGTYIDKKCPFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQVGDTVTVGECRPLSKTVRFNVLKVTKAAGTKKQFQKF 158
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BLAST of 40s ribosomal protein s11 vs. SwissProt
Match: gi|109915165|sp|P52812.2|RS11_ANOGA (RecName: Full=40S ribosomal protein S11)

HSP 1 Score: 213.386 bits (542), Expect = 1.336e-70
Identity = 100/146 (68.49%), Postives = 121/146 (82.88%), Query Frame = 0 
Query:   34 RGFQKQHNVFLSKKGGLKKSEARWTANPGLGFKIPVEAREGSYIDKKCPFTGKVSIRGRVLTGVITKMKMNRTVVIRRDYLHYIKKYNRFEKRHKNISVHLSPCFRDVQVGDVLTVGECRPLSKTVKFNTLKVNKAAGCKKSFSKF 179
            R FQKQ  + L++K   +K   R   + GLGFK P EA  G+YIDKKCPFTG +SIRGR+LTGV+ KMKM+RT+VIRRDYLH+I+KY+RFEKRH+N+SVHLSPCFRDV+ GD++TVGECRPLSKTV+FN LKV+K AG KK FSKF
Sbjct:    8 RAFQKQLGINLNRKNVSRKKGLRMHHSIGLGFKTPKEAITGTYIDKKCPFTGHISIRGRILTGVVRKMKMHRTIVIRRDYLHFIRKYDRFEKRHRNMSVHLSPCFRDVEAGDIVTVGECRPLSKTVRFNVLKVSKMAGSKKKFSKF 153
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BLAST of 40s ribosomal protein s11 vs. SwissProt
Match: gi|143462442|sp|Q292D0.2|RS11_DROPS (RecName: Full=40S ribosomal protein S11)

HSP 1 Score: 197.593 bits (501), Expect = 2.324e-64
Identity = 97/151 (64.24%), Postives = 117/151 (77.48%), Query Frame = 0 
Query:   32 TERGFQKQHNVFLSKK---GGLKKSEARWTANPGLGFKIPVEAREGSYIDKKCPFTGKVSIRGRVLTGVITKMKMNRTVVIRRDYLHYIKKYNRFEKRHKNISVHLSPCFRDVQVGDVLTVGECRPLSKTVKFNTLKVNKAAGCKKSFSKF 179
             ER FQKQ  V L++K   G  KK   R   + GLGFK P EA +G+YIDKKCP+TG V IRGR+L GV+ K KM RT+VIRRDYLH+++KY+RFEKRH+N+SVH SP FRDV+ GD++T+GECRPLSKTV+FN LKVNK  G KKSF KF
Sbjct:    5 NERAFQKQFGVNLNRKVKPGVTKKKILRRYRDVGLGFKTPREAIDGTYIDKKCPWTGDVRIRGRILIGVVRKTKMQRTIVIRRDYLHFVRKYSRFEKRHRNMSVHCSPAFRDVEHGDIVTIGECRPLSKTVRFNVLKVNKGQGAKKSFKKF 155
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BLAST of 40s ribosomal protein s11 vs. SwissProt
Match: gi|74917192|sp|Q6XHX5.1|RS11_DROYA (RecName: Full=40S ribosomal protein S11 >gi|121953145|sp|Q0E9B6.1|RS11_DROME RecName: Full=40S ribosomal protein S11)

HSP 1 Score: 197.593 bits (501), Expect = 2.350e-64
Identity = 96/151 (63.58%), Postives = 119/151 (78.81%), Query Frame = 0 
Query:   32 TERGFQKQHNVFLSKK---GGLKKSEARWTANPGLGFKIPVEAREGSYIDKKCPFTGKVSIRGRVLTGVITKMKMNRTVVIRRDYLHYIKKYNRFEKRHKNISVHLSPCFRDVQVGDVLTVGECRPLSKTVKFNTLKVNKAAGCKKSFSKF 179
             ER FQKQ  V L++K   G  KK   R + + GLGFK P EA +G+YIDKKCP+TG V IRGR+LTGV+ K KM RT+VIRRDYLH+++KY+RFEKRH+N+SVH SP FRDV+ GD++T+GECRPLSKTV+FN LKV+K  G KKSF K+
Sbjct:    5 NERAFQKQFGVNLNRKVKPGITKKKLLRRSRDVGLGFKTPREAIDGTYIDKKCPWTGDVRIRGRILTGVVRKAKMQRTIVIRRDYLHFVRKYSRFEKRHRNMSVHCSPVFRDVEHGDIVTIGECRPLSKTVRFNVLKVSKGQGAKKSFKKY 155
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BLAST of 40s ribosomal protein s11 vs. SwissProt
Match: gi|338819314|sp|P0CX47.1|RS11A_YEAST (RecName: Full=40S ribosomal protein S11-A; AltName: Full=RP41; AltName: Full=S18; AltName: Full=Small ribosomal subunit protein uS17-A; AltName: Full=YS12 >gi|338819315|sp|P0CX48.1|RS11B_YEAST RecName: Full=40S ribosomal protein S11-B; AltName: Full=RP41; AltName: Full=S18; AltName: Full=Small ribosomal subunit protein uS17-B; AltName: Full=YS12)

HSP 1 Score: 197.208 bits (500), Expect = 4.430e-64
Identity = 95/150 (63.33%), Postives = 115/150 (76.67%), Query Frame = 0 
Query:   31 DTERGFQKQHNVFLSKKGGLKKSEARWTANPGLGFKIPVEAREGSYIDKKCPFTGKVSIRGRVLTGVITKMKMNRTVVIRRDYLHYIKKYNRFEKRHKNISVHLSPCFRDVQVGDVLTVGECRPLSKTVKFNTLKVNKAAG-CKKSFSKF 179
             +ER FQKQ ++F + K    K   RW  N GLGFK P  A EGSYIDKKCPFTG VSIRG++LTG +   KM+RT+VIRR YLHYI KYNR+EKRHKN+ VH+SP FR VQVGD++TVG+CRP+SKTV+FN +KV+ AAG   K F+KF
Sbjct:    8 QSERAFQKQPHIFNNPKVKTSKRTKRWYKNAGLGFKTPKTAIEGSYIDKKCPFTGLVSIRGKILTGTVVSTKMHRTIVIRRAYLHYIPKYNRYEKRHKNVPVHVSPAFR-VQVGDIVTVGQCRPISKTVRFNVVKVSAAAGKANKQFAKF 156
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BLAST of 40s ribosomal protein s11 vs. SwissProt
Match: gi|857338260|sp|P0CT73.1|RS11A_SCHPO (RecName: Full=40S ribosomal protein S11-A >gi|857338448|sp|P0CT74.1|RS11B_SCHPO RecName: Full=40S ribosomal protein S11-B)

HSP 1 Score: 182.185 bits (461), Expect = 2.673e-58
Identity = 87/152 (57.24%), Postives = 111/152 (73.03%), Query Frame = 0 
Query:   28 LFGDTERGFQKQHNVFLSKKGGLKKSEARWTANPGLGFKIPVEAREGSYIDKKCPFTGKVSIRGRVLTGVITKMKMNRTVVIRRDYLHYIKKYNRFEKRHKNISVHLSPCFRDVQVGDVLTVGECRPLSKTVKFNTLKVNKAAGCKKSFSKF 179
            L   +ER FQKQ ++F + K G  +   RW  + GLGFK P EA  G Y+DKKCPF G+VSIRGR+LTG +   KM+RT++IRR+YLH+I KYNR+EKRHKN++ H+SP FR +  GDV+TVG+CRPLSKTV+FN L+V K     K F KF
Sbjct:    5 LVVQSERAFQKQPHIFQNAKKGAGR---RWYKDVGLGFKTPAEAIYGEYVDKKCPFVGQVSIRGRILTGTVVSTKMHRTIIIRREYLHFIPKYNRYEKRHKNLAAHVSPAFR-INEGDVVTVGQCRPLSKTVRFNVLRVVKHTEGPKQFGKF 152
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BLAST of 40s ribosomal protein s11 vs. SwissProt
Match: gi|1173222|sp|P42756.1|RS11_DUNTE (RecName: Full=40S ribosomal protein S11)

HSP 1 Score: 171.785 bits (434), Expect = 4.400e-54
Identity = 91/154 (59.09%), Postives = 111/154 (72.08%), Query Frame = 0 
Query:   32 TERGFQKQHNV---FLSK-KGGLKKSEARWTANPGLGFKIPVEAREGSYIDKKCPFTGKVSIRGRVLTGVITKMKMNRTVVIRRDYLHYIKKYNRFEKRHKNISVHLSPCFRDVQVGDVLTVGECRPLSKTVKFNTLKVNKAAGC--KKSFSKF 179
            TE+ FQKQ  V   F SK K    KS  R+  N GL FK P EA +G+Y+DKKCPFTG VSIRGR+LTGV+   KM RT+++RRDYLH+I KY R+EKRH NI  H+SPCFR V+ GD + +G+CRPLSKT++FN L+V   AG   KKSFS F
Sbjct:    5 TEKAFQKQVGVTGCFKSKEKKAPGKSGHRFFKNVGLNFKTPKEAIDGNYVDKKCPFTGNVSIRGRILTGVVKSSKMMRTIIVRRDYLHFIPKYARYEKRHTNIPAHVSPCFR-VRDGDTVIIGQCRPLSKTIRFNVLRVIPQAGATGKKSFSGF 157
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BLAST of 40s ribosomal protein s11 vs. SwissProt
Match: gi|11134432|sp|O65569.2|RS112_ARATH (RecName: Full=40S ribosomal protein S11-2)

HSP 1 Score: 167.933 bits (424), Expect = 1.254e-52
Identity = 88/155 (56.77%), Postives = 108/155 (69.68%), Query Frame = 0 
Query:   31 DTERGFQKQHNVFLSKKGGLKKSEA-----RWTANPGLGFKIPVEAREGSYIDKKCPFTGKVSIRGRVLTGVITKMKMNRTVVIRRDYLHYIKKYNRFEKRHKNISVHLSPCFRDVQVGDVLTVGECRPLSKTVKFNTLKVNKAAGC---KKSFS 177
             TE+ F KQ  VFLS K   K         R+  N GLGFK P EA EG+YID+KCPFTG VSIRGR+L+G     KM RT+++RRDYLH++KKY R+EKRH NI  H+SPCFR V+ GD +T+G+CRPLSKTV+FN LKV  A      KK+F+
Sbjct:    4 QTEKAFLKQPKVFLSSKKSGKGKRPGKGGNRFWKNIGLGFKTPREAIEGTYIDQKCPFTGTVSIRGRILSGTCHSAKMQRTIIVRRDYLHFVKKYRRYEKRHSNIPAHVSPCFR-VKEGDRVTIGQCRPLSKTVRFNVLKVIPAGSSSIGKKAFT 157
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BLAST of 40s ribosomal protein s11 vs. nr
Match: gi|961375688|gb|ALS04588.1| (40S ribosomal protein S11 [Pseudodiaptomus poplesia] >gi|1148368819|gb|AQS22652.1| 40S ribosomal protein S11 [Pseudodiaptomus poplesia])

HSP 1 Score: 262.307 bits (669), Expect = 1.723e-87
Identity = 124/147 (84.35%), Postives = 134/147 (91.16%), Query Frame = 0 
Query:   33 ERGFQKQHNVFLSKKGGLKKSEARWTANPGLGFKIPVEAREGSYIDKKCPFTGKVSIRGRVLTGVITKMKMNRTVVIRRDYLHYIKKYNRFEKRHKNISVHLSPCFRDVQVGDVLTVGECRPLSKTVKFNTLKVNKAAGCKKSFSKF 179
            ER FQKQ  VFL+KKGGLK SE+RW  NPGLGFKIP EA+ G+YIDKKCPFTGKVSIRGR+LTGVITKMKMNRTVVIRRDYLHY++KYNRFEKRHKN+SVHLSPCFRDVQVGD +TVGECRPLSKTVKFNTLKV K+   KKSFSKF
Sbjct:    6 ERAFQKQPTVFLNKKGGLKPSESRWFCNPGLGFKIPQEAKNGNYIDKKCPFTGKVSIRGRILTGVITKMKMNRTVVIRRDYLHYVRKYNRFEKRHKNMSVHLSPCFRDVQVGDTVTVGECRPLSKTVKFNTLKVTKSQASKKSFSKF 152
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BLAST of 40s ribosomal protein s11 vs. nr
Match: gi|1148369174|gb|AQS22823.1| (40S ribosomal protein s11 [Pseudodiaptomus poplesia])

HSP 1 Score: 260.381 bits (664), Expect = 1.063e-86
Identity = 123/147 (83.67%), Postives = 133/147 (90.48%), Query Frame = 0 
Query:   33 ERGFQKQHNVFLSKKGGLKKSEARWTANPGLGFKIPVEAREGSYIDKKCPFTGKVSIRGRVLTGVITKMKMNRTVVIRRDYLHYIKKYNRFEKRHKNISVHLSPCFRDVQVGDVLTVGECRPLSKTVKFNTLKVNKAAGCKKSFSKF 179
            ER FQKQ  VFL+KKGGLK SE+RW  NPGLGFKIP EA+ G+YIDKKCPFTGKVSIRGR+LTGVITKMKMNRTVVIRRDYLHY++KYNRFEKRHKN+SVHLSPCFRDVQVGD +TVGECRPLSKTVKFNTLKV K+   KKS SKF
Sbjct:    6 ERAFQKQPTVFLNKKGGLKPSESRWFCNPGLGFKIPQEAKNGNYIDKKCPFTGKVSIRGRILTGVITKMKMNRTVVIRRDYLHYVRKYNRFEKRHKNMSVHLSPCFRDVQVGDTVTVGECRPLSKTVKFNTLKVTKSQASKKSLSKF 152
[Close]
BLAST of 40s ribosomal protein s11 vs. nr
Match: gi|961376442|gb|ALS04965.1| (40S ribosomal protein S11 [Pseudodiaptomus poplesia])

HSP 1 Score: 260.381 bits (664), Expect = 1.226e-86
Identity = 123/146 (84.25%), Postives = 133/146 (91.10%), Query Frame = 0 
Query:   33 ERGFQKQHNVFLSKKGGLKKSEARWTANPGLGFKIPVEAREGSYIDKKCPFTGKVSIRGRVLTGVITKMKMNRTVVIRRDYLHYIKKYNRFEKRHKNISVHLSPCFRDVQVGDVLTVGECRPLSKTVKFNTLKVNKAAGCKKSFSK 178
            ER FQKQ  VFL+KKGGLK SE+RW  NPGLGFKIP EA+ G+YIDKKCPFTGKVSIRGR+LTGVITKMKMNRTVVIRRDYLHY++KYNRFEKRHKN+SVHLSPCFRDVQVGD +TVGECRPLSKTVKFNTLKV K+   KKSFSK
Sbjct:    6 ERAFQKQPTVFLNKKGGLKPSESRWFCNPGLGFKIPQEAKNGNYIDKKCPFTGKVSIRGRILTGVITKMKMNRTVVIRRDYLHYVRKYNRFEKRHKNMSVHLSPCFRDVQVGDTVTVGECRPLSKTVKFNTLKVTKSQASKKSFSK 151
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BLAST of 40s ribosomal protein s11 vs. nr
Match: gi|961374734|gb|ALS04111.1| (40S ribosomal protein S11 [Acartia pacifica])

HSP 1 Score: 258.84 bits (660), Expect = 4.095e-86
Identity = 120/147 (81.63%), Postives = 133/147 (90.48%), Query Frame = 0 
Query:   33 ERGFQKQHNVFLSKKGGLKKSEARWTANPGLGFKIPVEAREGSYIDKKCPFTGKVSIRGRVLTGVITKMKMNRTVVIRRDYLHYIKKYNRFEKRHKNISVHLSPCFRDVQVGDVLTVGECRPLSKTVKFNTLKVNKAAGCKKSFSKF 179
            ER FQKQ  +F +KKGGLK SE+RW  NPGLGFKIP+EA+ G+Y+DKKCPFTGK+SIRGRVLTG ITKMKMNRTVVIRRDYLHY+KKYNRFEKRHKN+SVHLSPCFRDVQVGD +TVGECRPLSKTV+FNTLKV K+   KKSFSKF
Sbjct:    6 ERAFQKQPTIFQNKKGGLKPSESRWFCNPGLGFKIPIEAKTGNYVDKKCPFTGKISIRGRVLTGTITKMKMNRTVVIRRDYLHYVKKYNRFEKRHKNMSVHLSPCFRDVQVGDAVTVGECRPLSKTVRFNTLKVTKSQASKKSFSKF 152
[Close]
BLAST of 40s ribosomal protein s11 vs. nr
Match: gi|509391768|gb|AGN29665.1| (40S ribosomal protein S11 [Acartia pacifica] >gi|961374728|gb|ALS04108.1| 40S ribosomal protein S11 [Acartia pacifica] >gi|961374730|gb|ALS04109.1| 40S ribosomal protein S11 [Acartia pacifica])

HSP 1 Score: 258.84 bits (660), Expect = 4.421e-86
Identity = 120/147 (81.63%), Postives = 133/147 (90.48%), Query Frame = 0 
Query:   33 ERGFQKQHNVFLSKKGGLKKSEARWTANPGLGFKIPVEAREGSYIDKKCPFTGKVSIRGRVLTGVITKMKMNRTVVIRRDYLHYIKKYNRFEKRHKNISVHLSPCFRDVQVGDVLTVGECRPLSKTVKFNTLKVNKAAGCKKSFSKF 179
            ER FQKQ  +F +KKGGLK SE+RW  NPGLGFKIP+EA+ G+Y+DKKCPFTGK+SIRGRVLTG ITKMKMNRTVVIRRDYLHY+KKYNRFEKRHKN+SVHLSPCFRDVQVGD +TVGECRPLSKTV+FNTLKV K+   KKSFSKF
Sbjct:    6 ERAFQKQPTIFQNKKGGLKPSESRWFCNPGLGFKIPIEAKTGNYVDKKCPFTGKISIRGRVLTGTITKMKMNRTVVIRRDYLHYVKKYNRFEKRHKNMSVHLSPCFRDVQVGDTVTVGECRPLSKTVRFNTLKVTKSQASKKSFSKF 152
[Close]
BLAST of 40s ribosomal protein s11 vs. nr
Match: gi|961377002|gb|ALS05245.1| (40S ribosomal protein S11 [Tortanus dextrilobatus])

HSP 1 Score: 258.07 bits (658), Expect = 1.006e-85
Identity = 122/148 (82.43%), Postives = 134/148 (90.54%), Query Frame = 0 
Query:   32 TERGFQKQHNVFLSKKGGLKKSEARWTANPGLGFKIPVEAREGSYIDKKCPFTGKVSIRGRVLTGVITKMKMNRTVVIRRDYLHYIKKYNRFEKRHKNISVHLSPCFRDVQVGDVLTVGECRPLSKTVKFNTLKVNKAAGCKKSFSKF 179
            +ER FQKQ  +F +KKGGLK SE+R+  NPGLGFKIPVEAR G+Y+DKKCPFTGKVSIRGRVLTG+ITKMKMNRTVVIRRDYLHY+KKYNRFEKRHKN+SVHLSPCFRDVQVGD +TVGECRPLSKTVKFNTLKV K    KKSF+KF
Sbjct:    5 SERAFQKQPTIFQNKKGGLKPSESRFFYNPGLGFKIPVEARTGNYVDKKCPFTGKVSIRGRVLTGMITKMKMNRTVVIRRDYLHYVKKYNRFEKRHKNMSVHLSPCFRDVQVGDTVTVGECRPLSKTVKFNTLKVTKGQASKKSFAKF 152
[Close]
BLAST of 40s ribosomal protein s11 vs. nr
Match: gi|961376186|gb|ALS04837.1| (40S ribosomal protein S11 [Pseudodiaptomus poplesia])

HSP 1 Score: 257.684 bits (657), Expect = 1.493e-85
Identity = 121/147 (82.31%), Postives = 132/147 (89.80%), Query Frame = 0 
Query:   33 ERGFQKQHNVFLSKKGGLKKSEARWTANPGLGFKIPVEAREGSYIDKKCPFTGKVSIRGRVLTGVITKMKMNRTVVIRRDYLHYIKKYNRFEKRHKNISVHLSPCFRDVQVGDVLTVGECRPLSKTVKFNTLKVNKAAGCKKSFSKF 179
            ER FQKQ  VFL+K+GGLK SE+RW  NPGLGFKIP EA+ G+YIDKKCPFTGKVSIRGR+LTGVITKMKMNRTVVIRRDYLHY++KYNRFEKRHKN+SVHL PCFRD QVGD +TVGECRPLSKTVKFNTLKV K+   KKSFSKF
Sbjct:    6 ERAFQKQPTVFLNKEGGLKPSESRWFCNPGLGFKIPQEAKNGNYIDKKCPFTGKVSIRGRILTGVITKMKMNRTVVIRRDYLHYVRKYNRFEKRHKNMSVHLCPCFRDAQVGDTVTVGECRPLSKTVKFNTLKVTKSQASKKSFSKF 152
[Close]
BLAST of 40s ribosomal protein s11 vs. nr
Match: gi|290462803|gb|ADD24449.1| (40S ribosomal protein S11 [Lepeophtheirus salmonis] >gi|290561645|gb|ADD38222.1| 40S ribosomal protein S11 [Lepeophtheirus salmonis])

HSP 1 Score: 256.914 bits (655), Expect = 2.366e-85
Identity = 120/147 (81.63%), Postives = 135/147 (91.84%), Query Frame = 0 
Query:   33 ERGFQKQHNVFLSKKGGLKKSEARWTANPGLGFKIPVEAREGSYIDKKCPFTGKVSIRGRVLTGVITKMKMNRTVVIRRDYLHYIKKYNRFEKRHKNISVHLSPCFRDVQVGDVLTVGECRPLSKTVKFNTLKVNKAAGCKKSFSKF 179
            ER FQKQ  +FL++KGGLKK+E+R+  NPGLGFKIP EAREG YIDKKCPFTGKVSIRGR+LTGVITK+KM  T VIRRDYLHY+KKYNRFEKRHKN+SVHLSPCFRDVQ+GDVLTVGECRPLSKTVKFNTLKVNK++G KK+F K+
Sbjct:    6 ERAFQKQPTIFLARKGGLKKTESRFVVNPGLGFKIPREAREGHYIDKKCPFTGKVSIRGRILTGVITKLKMKNTCVIRRDYLHYVKKYNRFEKRHKNMSVHLSPCFRDVQIGDVLTVGECRPLSKTVKFNTLKVNKSSGNKKTFRKY 152
[Close]
BLAST of 40s ribosomal protein s11 vs. nr
Match: gi|1325271169|ref|XP_023320190.1| (40S ribosomal protein S11-like [Eurytemora affinis])

HSP 1 Score: 256.914 bits (655), Expect = 2.758e-85
Identity = 122/149 (81.88%), Postives = 134/149 (89.93%), Query Frame = 0 
Query:   31 DTERGFQKQHNVFLSKKGGLKKSEARWTANPGLGFKIPVEAREGSYIDKKCPFTGKVSIRGRVLTGVITKMKMNRTVVIRRDYLHYIKKYNRFEKRHKNISVHLSPCFRDVQVGDVLTVGECRPLSKTVKFNTLKVNKAAGCKKSFSKF 179
             TER FQKQ  +FL+KKGGLK SE+R+  NPGLGFKIP EAR G+YIDKKCPFTGKVSIRGRVLTG+ITK KMNRTVVIRRDYLHY+KKYNRFEKRHKN+SVHLSPCFRD +VGDV+TVGECRPLSKTVKFNTLKV K+   KKSF+KF
Sbjct:    4 QTERAFQKQPTIFLNKKGGLKPSESRFFYNPGLGFKIPTEARTGNYIDKKCPFTGKVSIRGRVLTGLITKTKMNRTVVIRRDYLHYVKKYNRFEKRHKNMSVHLSPCFRDARVGDVVTVGECRPLSKTVKFNTLKVTKSQASKKSFNKF 152
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BLAST of 40s ribosomal protein s11 vs. nr
Match: gi|961374726|gb|ALS04107.1| (40S ribosomal protein S11 [Acartia pacifica])

HSP 1 Score: 255.758 bits (652), Expect = 8.625e-85
Identity = 119/147 (80.95%), Postives = 132/147 (89.80%), Query Frame = 0 
Query:   33 ERGFQKQHNVFLSKKGGLKKSEARWTANPGLGFKIPVEAREGSYIDKKCPFTGKVSIRGRVLTGVITKMKMNRTVVIRRDYLHYIKKYNRFEKRHKNISVHLSPCFRDVQVGDVLTVGECRPLSKTVKFNTLKVNKAAGCKKSFSKF 179
            ER FQKQ  +F +KKGGLK SE+RW  NPGLGFKIP+EA+ G+Y+DKKCPFTGK+SIRGRVLTG ITKMKMNRTVVIRRDYLHY+KKYNRFEKRHKN+SVHLSPCFR VQVGD +TVGECRPLSKTV+FNTLKV K+   KKSFSKF
Sbjct:    6 ERAFQKQPTIFQNKKGGLKPSESRWFCNPGLGFKIPIEAKTGNYVDKKCPFTGKISIRGRVLTGTITKMKMNRTVVIRRDYLHYVKKYNRFEKRHKNMSVHLSPCFRGVQVGDTVTVGECRPLSKTVRFNTLKVTKSQASKKSFSKF 152
The following BLAST results are available for this feature:
BLAST of 40s ribosomal protein s11 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAG000000085081.709e-4484.42supercontig:LSalAtl2s:LSalAtl2s524:158939:159254:-... [more]
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BLAST of 40s ribosomal protein s11 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
gi|47117088|sp|P61270.3|RS11_MACFA1.733e-7671.43RecName: Full=40S ribosomal protein S11 >gi|504036... [more]
gi|325530310|sp|Q9XSU4.2|RS11_CANFA1.435e-7571.24RecName: Full=40S ribosomal protein S11[more]
gi|730626|sp|P41115.1|RS11_XENLA8.647e-7571.24RecName: Full=40S ribosomal protein S11[more]
gi|109915165|sp|P52812.2|RS11_ANOGA1.336e-7068.49RecName: Full=40S ribosomal protein S11[more]
gi|143462442|sp|Q292D0.2|RS11_DROPS2.324e-6464.24RecName: Full=40S ribosomal protein S11[more]
gi|74917192|sp|Q6XHX5.1|RS11_DROYA2.350e-6463.58RecName: Full=40S ribosomal protein S11 >gi|121953... [more]
gi|338819314|sp|P0CX47.1|RS11A_YEAST4.430e-6463.33RecName: Full=40S ribosomal protein S11-A; AltName... [more]
gi|857338260|sp|P0CT73.1|RS11A_SCHPO2.673e-5857.24RecName: Full=40S ribosomal protein S11-A >gi|8573... [more]
gi|1173222|sp|P42756.1|RS11_DUNTE4.400e-5459.09RecName: Full=40S ribosomal protein S11[more]
gi|11134432|sp|O65569.2|RS112_ARATH1.254e-5256.77RecName: Full=40S ribosomal protein S11-2[more]

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BLAST of 40s ribosomal protein s11 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|961375688|gb|ALS04588.1|1.723e-8784.3540S ribosomal protein S11 [Pseudodiaptomus poplesi... [more]
gi|1148369174|gb|AQS22823.1|1.063e-8683.6740S ribosomal protein s11 [Pseudodiaptomus poplesi... [more]
gi|961376442|gb|ALS04965.1|1.226e-8684.2540S ribosomal protein S11 [Pseudodiaptomus poplesi... [more]
gi|961374734|gb|ALS04111.1|4.095e-8681.6340S ribosomal protein S11 [Acartia pacifica][more]
gi|509391768|gb|AGN29665.1|4.421e-8681.6340S ribosomal protein S11 [Acartia pacifica] >gi|9... [more]
gi|961377002|gb|ALS05245.1|1.006e-8582.4340S ribosomal protein S11 [Tortanus dextrilobatus][more]
gi|961376186|gb|ALS04837.1|1.493e-8582.3140S ribosomal protein S11 [Pseudodiaptomus poplesi... [more]
gi|290462803|gb|ADD24449.1|2.366e-8581.6340S ribosomal protein S11 [Lepeophtheirus salmonis... [more]
gi|1325271169|ref|XP_023320190.1|2.758e-8581.8840S ribosomal protein S11-like [Eurytemora affinis... [more]
gi|961374726|gb|ALS04107.1|8.625e-8580.9540S ribosomal protein S11 [Acartia pacifica][more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold626_size122949supercontigscaffold626_size122949:47844..57990 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
NoteC:ribosome
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold626_size122949-snap-gene-0.26-mRNA-1maker-scaffold626_size122949-snap-gene-0.26-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold626_size122949:47844..57990+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold626_size122949-snap-gene-0.26 ID=maker-scaffold626_size122949-snap-gene-0.26|Name=40s ribosomal protein s11|organism=Tigriopus kingsejongensis|type=gene|length=10147bp|location=Sequence derived from alignment at scaffold626_size122949:47844..57990+ (Tigriopus kingsejongensis)
ATGGTGGACCGATTAGACCATGGTCTCACTCAGTACTCACGCCAGCAGAG
GACAACCTTCGTAGCGGCGAGGCCGCAGACTCTTTTCGGGGACGTCATTG
GCAACCAGCACAAAGATGGCCGCAATTGAATCGAACTCGGGATCGGGCAG
CAGCTTTTGTCTTGTGCTCACGTGGAGCTCCATGGACATTACGGAGAGAT
GCTGATGCTGCAAAATTCCGAAAGAAAAAATACTGCTTGACTCGCCCCTT
TTTGGCTGGGGTTTTTCATTTTCTACGCCCATCCGGACGGATCGGCTGAT
GCAAAGAATGGCAACAATTCTGCTTGGATTTAGTGATCTAACTAACGCTT
CTTGAGCATTTCGGTCAATACAAAAAAGGGATACAATTCGGCAAACGGTC
CAGCTTCAGGGTCCGTCCGTTTTTTGGGAGCCGCTCCGACTCCGGTTTCC
TATTGGAGTCGCTTACTCCGCTGCAGAGCGGATTTTAGAGCTGCCGAAGT
GGTTTTCGGAGCGCCTTTTATTCTTTATGTGTATGGCATTAGAACAATAA
TAGGGATCGGTCTTTTGAACCTTCTAATTAAGTGCTATCACCAAATTAAG
CATGTTTGATATACCCTGTCCGGAGTCGGCTTCGGCAAACGGCTCCGGGC
GGCTCTAGGAGTTTCGGAGTCGGCTCCGCTCCGTTTTGGGGTCGGAGCGG
GAGTCACATAGCTCCACTCCGCTCCAAGTGCGGACCAAACCCTATTCAGT
TTGCGAAACTACAATTTTTCCACTTTCACATGACGCAGAACCAATTTTCG
GCCAATTAAGTTACAGCGAAAATGACCAGTTTTGGGGTGGCCCATTTTTT
CTTCTGTTCACTAGAACAAATCGCCAAATTATTGACAAACTTTTGCCAAT
CATTGTTCATACATATTTCTCCAGAGTCACGAACAACTTCAGATTAAAGA
CGTCCCTGCCAGAGTCGATAGAGTGCGAGGGAAATGTGTTTTTTCCCAAA
GCTCATCCGTTTGCCCGATTCGGCAGAGATGACAGGTTATTTCCGTTAAA
AAATATCCACTGAGCCTGACTTTTGTTAGCATTTATGACTGGATTTGCTT
CGAAATGACAGCAGAATATAAGAATAATTTTCTCGAAAAGGGTCAAAACA
TTTAAAATTTCCTGAAAAAACATCGAGCACATAAAAAGAAATCCAGCATC
AAAAAGCTGTAGCTCATCGAAGTTTTCAATAACGAAAACGAATGACAGAT
AATATTGTTAACTCTGGGCACTCTGGGAAGCTCTCAGTGATGTCAGGCTG
GCCATGTTCAGCTCATTAGTGCTGCACTAGTCGTGATAATCTACTTTTGC
AACCAACTTTGAGCTGAATGCATCTTTATTTCCAATTAGAAAATCTGGTC
ACTTTTGACGTTGGCCCTAAGTTTGGCAAGCATAATTCTTCCATGTGTAC
AGGGTTCCATGGCTTACCCGACGTGATATAGCACAGATGGGAAGAGCAAT
TGTAAGATAAGCGAATCTGGACTCTTGTGGAACAATATTGGTAGAAAGCA
CCAAAGGTCGTGAGTGTATCTCTAGCTCTTTATAAAGCCTTGGTCCAGCC
TGGTACACAAATTGAGTATGAGTCCCAAGTCTGGTAAGCGTAATTCTTCC
ATGTGTACAGGGTTCCCTGGTTTATCATTGCCGAAAGTTCGTTTGTTTTG
CTTACAATCAGCAATTTGTCGAAATTTGGATAGTTTGGAATTGGTTGTGC
AATCAACCCAGCATACAAGAATTTCGAAAGAAATGTTTTTGGGTACATCA
CTAGCACTGTTTACGTAGTAACATTATATTCGTAGGGCGCTTGTTTCGCG
TTTTAACTTAAACCATAGATAACTCGACCCTGGTAGTCACAGCCAGTCTT
AAAAGACTCAATATAATACAGTGGACCCGATGAAGCCACCAGAGCTCAGT
GTCAGCGAGCGCTGCGTTGATGCGAAGTGGCCGGGTTCGAATCCCGTGCT
TACTAATTCATGGCAGCTAGTGGTGTAAACTCACAGCTATTGTTTGGCCG
GCGAGATGAAATTGGATGGACCTGCGGTCATCCGTAGAAGCTATTGGTAA
CAGTTCATGATAAATTTGTTTTGCTGGCTGCTAGGCCTCAACATAGGTTT
CCGGGGCCTTCCAAACAGGCAGCACAGTGGACACCAATGTTCAAGGGATT
ACCTCAGACATCGCTTTGACTTCTTTGAGGTTTTCAAAGCTCATCTTGAA
GTTGTGCGTATTATTGGGTGAAGGTCCTTCGATGGGTGAACTCGGCGAAT
TCGGTTTCCCAGCCAAGCGCTCGCCCAAAGAGGGCTCGGGCGTTAGGAAC
TTTCTGCGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNATCCCGTCACCTTGTGGGCTCACACTCACGG
TCCTGTAAACCCTTAACTTGTCGCTCACCGACTACGCATGCACACCTACC
TCGACGGGGATCTTGAATCCCAATCCGGGGTTAGCGGTCCATCGCGCCTC
GCTCTTCTTGAGGCCTCCCTTCTTGCTGAGGAAGACGTTGTGTTGCTTTT
GAAAGCCGCGCTCAGTCTATGTGGAGCGATCAATGTGGAAAAAGGCAACA
AAACCAGGCAGCAAACAATGGGAACGGGAGAAAGGAGAGAAAACAAAGCG
GCACACGTTAGACTAGGCATTAGAACGACTACTACAACTTAAAATGTGGG
CACACGGGTGGGGATAAAAGGCCTAAGGCCGTCTACTACGACGGGATGTC
CAGACAGGCATACTGGAGTGGGCTCAAACACATCACCTCAGTGGGAGTCT
TGAAACCCAGACCCACTTCGCGCAAGTAGCGCTTCAATGTGACCTTCTAG
TCTAACGTGTGCCGCTTTGTTTTCTCTCCTTTCTCCCGTTCCCATTGTTT
GCTGCCTGGTTTTGTTGCCTTTTTCCACATTGATCGCTCCACATAGACTG
AGCGCGGCTTTCAAAAGCAACACAACGTCTTCCTCAGCAAGAAGGGAGGC
CTCAAGAAGAGCGAGGCGCGATGGACCGCTAACCCCGGATTGGGATTCAA
GATCCCCGTCGAGGTAGGTGTGCATGCGTAGTCGGTGAGCGACAAGTTAA
GGGTTTACAGGACCGTGAGTGTGAGCCCACAAGGTGACGGGATGGTAACG
ATAACTGAAACCATCTCCCTTTAGGCTCGTGAGGGCAGTTACATCGACAA
GAAGTGCCCCTTCACCGGCAAGGTCTCCATCCGTGGCCGTGTTCTGACTG
GTGTCATCACCAAGATGAAGATGAACCGCACCGTGGTCATCCGACGCGAT
TACCTTCATTACATCAAGAAATACAACCGTTTCGAAAAGAGGCACAAGAA
CATTTCCGTGCATCTGTCCCCGTGCTTCAGGTAAGAGCCTCAATTTCATG
CCTTCCATCGACCTCGGGTGTCTGACCATGTTCTCGTTTCTCTCTGCCTT
CAGGGACGTGCAAGTCGGCGATGTCTTGACCGTGGGCGAATGCCGACCCC
TCTCCAAGACAGTGAAGTTCAACACCCTCAAGGTGAACAAGGCTGCCGGC
TGCAAGAAGTCCTTCTCCAAGTTCTAAGCAGCCATGTCATCCTTAATTAC
GATCCCTTTGTTCGACTCGGCGGGCCGTCGCTCCCACCATCCCGGCGAAT
AAAGTACCGGAACCCGTCTGATCATAATGAAAAACAAGCGCGAATTTATT
CTCTGGCCATCCACTCCGTAGTATTAGAACTTGATTAGGCGCAAATTGCC
CCATTGGAGCCACATGCTCTTCCAGAGTGCGATCTGCACTTCAGTCTGCT
CGACCACGGGTAGTTCCATGTGGCGAGCGATGAGCCTCTGACATTCT
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Synonyms
The feature '40s ribosomal protein s11' has the following synonyms
Synonym
Tk11474
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