y-box protein ct-p40, maker-scaffold627_size122700-snap-gene-0.27 (gene) Tigriopus kingsejongensis

Overview
Namey-box protein ct-p40
Unique Namemaker-scaffold627_size122700-snap-gene-0.27
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of y-box protein ct-p40 vs. L. salmonis genes
Match: EMLSAG00000001610 (supercontig:LSalAtl2s:LSalAtl2s1280:88137:89193:-1 gene:EMLSAG00000001610 transcript:EMLSAT00000001610 description:"maker-LSalAtl2s1280-snap-gene-0.13")

HSP 1 Score: 171.785 bits (434), Expect = 2.783e-51
Identity = 83/90 (92.22%), Postives = 86/90 (95.56%), Query Frame = 0 
Query:   58 KELVATKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAILKNNPKKAVRSVGDGEVVEFDVVVGEKGNEASNVSGPEGAPVKGSPYAAD 147
            KE+VA KV GTVKWFNVKSGYGFINRNDTKEDVFVHQTAI+KNNPKK VRSVGDGEVVEFDVVVGEKGNEASNVSGPEG+ VKGSPYAAD
Sbjct:   78 KEVVARKVLGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVKNNPKKMVRSVGDGEVVEFDVVVGEKGNEASNVSGPEGSAVKGSPYAAD 167
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BLAST of y-box protein ct-p40 vs. SwissProt
Match: gi|1175568|sp|P41824.1|YBOXH_APLCA (RecName: Full=Y-box factor homolog; AltName: Full=APY1)

HSP 1 Score: 162.54 bits (410), Expect = 2.985e-47
Identity = 78/103 (75.73%), Postives = 94/103 (91.26%), Query Frame = 0 
Query:   53 KEEPPKELVATKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAILKNNPKKAVRSVGDGEVVEFDVVVGEKGNEASNVSGPEGAPVKGSPYAADRKRGGFRR 155
            +E+  K+++A++VSGTVKWFNVKSGYGFINR+DTKEDVFVHQTAI+KNNP+K +RSVGDGE VEFDVV GEKGNEA+NV+GPEG+ V+GS YAADR+R  FRR
Sbjct:   21 EEQKEKKIIASQVSGTVKWFNVKSGYGFINRDDTKEDVFVHQTAIVKNNPRKYLRSVGDGEKVEFDVVEGEKGNEAANVTGPEGSNVQGSKYAADRRR--FRR 121
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BLAST of y-box protein ct-p40 vs. SwissProt
Match: gi|140245|sp|P21573.1|YBOX1_XENLA (RecName: Full=Nuclease-sensitive element-binding protein 1; AltName: Full=Y-box transcription factor; AltName: Full=Y-box-binding protein 1; Short=YB-1)

HSP 1 Score: 156.377 bits (394), Expect = 2.283e-44
Identity = 72/90 (80.00%), Postives = 82/90 (91.11%), Query Frame = 0 
Query:   58 KELVATKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAILKNNPKKAVRSVGDGEVVEFDVVVGEKGNEASNVSGPEGAPVKGSPYAAD 147
            K+++ATKV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI KNNP+K +RSVGDGE VEFDVV GEKG EA+NV+GPEG PV+GS YAAD
Sbjct:   30 KKVIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPEGVPVQGSKYAAD 119
[Close]
BLAST of y-box protein ct-p40 vs. SwissProt
Match: gi|6166111|sp|Q62764.1|YBOX3_RAT (RecName: Full=Y-box-binding protein 3; AltName: Full=Cold shock domain-containing protein A; AltName: Full=DNA-binding protein A; AltName: Full=Muscle Y-box protein YB2; AltName: Full=RYB-A; AltName: Full=Y-box-binding protein A)

HSP 1 Score: 152.91 bits (385), Expect = 1.899e-42
Identity = 74/99 (74.75%), Postives = 86/99 (86.87%), Query Frame = 0 
Query:   49 APLMKEEPPKELVATKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAILKNNPKKAVRSVGDGEVVEFDVVVGEKGNEASNVSGPEGAPVKGSPYAAD 147
            AP   E+  K+++ATKV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI KNNP+K +RSVGDGE VEFDVV GEKG EA+NV+GP+G PV+GS YAAD
Sbjct:   67 APAGSEDAEKKVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAAD 165
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BLAST of y-box protein ct-p40 vs. SwissProt
Match: gi|51704186|sp|P62961.3|YBOX1_RAT (RecName: Full=Nuclease-sensitive element-binding protein 1; AltName: Full=CCAAT-binding transcription factor I subunit A; Short=CBF-A; AltName: Full=DNA-binding protein B; Short=DBPB; AltName: Full=Enhancer factor I subunit A; Short=EFI-A; AltName: Full=Y-box transcription factor; AltName: Full=Y-box-binding protein 1; Short=YB-1 >gi|51704189|sp|P62960.3|YBOX1_MOUSE RecName: Full=Nuclease-sensitive element-binding protein 1; AltName: Full=CCAAT-binding transcription factor I subunit A; Short=CBF-A; AltName: Full=DNA-binding protein B; Short=DBPB; AltName: Full=Enhancer factor I subunit A; Short=EFI-A; AltName: Full=Y-box transcription factor; AltName: Full=Y-box-binding protein 1; Short=YB-1)

HSP 1 Score: 151.754 bits (382), Expect = 2.255e-42
Identity = 71/90 (78.89%), Postives = 81/90 (90.00%), Query Frame = 0 
Query:   58 KELVATKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAILKNNPKKAVRSVGDGEVVEFDVVVGEKGNEASNVSGPEGAPVKGSPYAAD 147
            K+++ATKV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI KNNP+K +RSVGDGE VEFDVV GEKG EA+NV+GP G PV+GS YAAD
Sbjct:   50 KKVIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAAD 139
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BLAST of y-box protein ct-p40 vs. SwissProt
Match: gi|54040030|sp|P67808.3|YBOX1_BOVIN (RecName: Full=Nuclease-sensitive element-binding protein 1; AltName: Full=CCAAT-binding transcription factor I subunit A; Short=CBF-A; AltName: Full=DNA-binding protein B; Short=DBPB; AltName: Full=Enhancer factor I subunit A; Short=EFI-A; AltName: Full=Y-box transcription factor; AltName: Full=Y-box-binding protein 1; Short=YB-1 >gi|54040031|sp|P67809.3|YBOX1_HUMAN RecName: Full=Nuclease-sensitive element-binding protein 1; AltName: Full=CCAAT-binding transcription factor I subunit A; Short=CBF-A; AltName: Full=DNA-binding protein B; Short=DBPB; AltName: Full=Enhancer factor I subunit A; Short=EFI-A; AltName: Full=Y-box transcription factor; AltName: Full=Y-box-binding protein 1; Short=YB-1)

HSP 1 Score: 151.754 bits (382), Expect = 2.267e-42
Identity = 71/90 (78.89%), Postives = 81/90 (90.00%), Query Frame = 0 
Query:   58 KELVATKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAILKNNPKKAVRSVGDGEVVEFDVVVGEKGNEASNVSGPEGAPVKGSPYAAD 147
            K+++ATKV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI KNNP+K +RSVGDGE VEFDVV GEKG EA+NV+GP G PV+GS YAAD
Sbjct:   52 KKVIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAAD 141
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BLAST of y-box protein ct-p40 vs. SwissProt
Match: gi|75069491|sp|Q28618.3|YBOX1_RABIT (RecName: Full=Nuclease-sensitive element-binding protein 1; AltName: Full=CCAAT-binding transcription factor I subunit A; Short=CBF-A; AltName: Full=Enhancer factor I subunit A; Short=EFI-A; AltName: Full=Y-box transcription factor; AltName: Full=Y-box-binding protein 1; Short=YB-1; AltName: Full=p50)

HSP 1 Score: 151.754 bits (382), Expect = 2.365e-42
Identity = 71/90 (78.89%), Postives = 81/90 (90.00%), Query Frame = 0 
Query:   58 KELVATKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAILKNNPKKAVRSVGDGEVVEFDVVVGEKGNEASNVSGPEGAPVKGSPYAAD 147
            K+++ATKV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI KNNP+K +RSVGDGE VEFDVV GEKG EA+NV+GP G PV+GS YAAD
Sbjct:   52 KKVIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAAD 141
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BLAST of y-box protein ct-p40 vs. SwissProt
Match: gi|465508|sp|Q06066.1|YBOX1_CHICK (RecName: Full=Nuclease-sensitive element-binding protein 1; AltName: Full=Y-box transcription factor; AltName: Full=Y-box-binding protein 1; Short=YB-1)

HSP 1 Score: 150.984 bits (380), Expect = 4.067e-42
Identity = 71/90 (78.89%), Postives = 81/90 (90.00%), Query Frame = 0 
Query:   58 KELVATKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAILKNNPKKAVRSVGDGEVVEFDVVVGEKGNEASNVSGPEGAPVKGSPYAAD 147
            K+++ATKV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI KNNP+K +RSVGDGE VEFDVV GEKG EA+NV+GP G PV+GS YAAD
Sbjct:   49 KKVIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAAD 138
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BLAST of y-box protein ct-p40 vs. SwissProt
Match: gi|61212920|sp|Q9JKB3.2|YBOX3_MOUSE (RecName: Full=Y-box-binding protein 3; AltName: Full=Cold shock domain-containing protein A; AltName: Full=DNA-binding protein A; AltName: Full=Y-box protein 3)

HSP 1 Score: 152.14 bits (383), Expect = 4.271e-42
Identity = 74/99 (74.75%), Postives = 86/99 (86.87%), Query Frame = 0 
Query:   49 APLMKEEPPKELVATKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAILKNNPKKAVRSVGDGEVVEFDVVVGEKGNEASNVSGPEGAPVKGSPYAAD 147
            AP   E+  K+++ATKV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI KNNP+K +RSVGDGE VEFDVV GEKG EA+NV+GP+G PV+GS YAAD
Sbjct:   67 APAGGEDAEKKVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAAD 165
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BLAST of y-box protein ct-p40 vs. SwissProt
Match: gi|140247|sp|Q00436.1|YB3_XENLA (RecName: Full=B box-binding protein; AltName: Full=Protein YB3)

HSP 1 Score: 149.443 bits (376), Expect = 1.397e-41
Identity = 70/90 (77.78%), Postives = 80/90 (88.89%), Query Frame = 0 
Query:   58 KELVATKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAILKNNPKKAVRSVGDGEVVEFDVVVGEKGNEASNVSGPEGAPVKGSPYAAD 147
            K+++ATKV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI KNNP+K +RSVGDGE VEFDVV GEKG EA+NV+GP   PV+GS YAAD
Sbjct:   30 KKVIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGPVPVQGSKYAAD 119
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BLAST of y-box protein ct-p40 vs. SwissProt
Match: gi|97536050|sp|P16989.4|YBOX3_HUMAN (RecName: Full=Y-box-binding protein 3; AltName: Full=Cold shock domain-containing protein A; AltName: Full=DNA-binding protein A; AltName: Full=Single-strand DNA-binding protein NF-GMB)

HSP 1 Score: 150.599 bits (379), Expect = 1.794e-41
Identity = 72/94 (76.60%), Postives = 84/94 (89.36%), Query Frame = 0 
Query:   54 EEPPKELVATKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAILKNNPKKAVRSVGDGEVVEFDVVVGEKGNEASNVSGPEGAPVKGSPYAAD 147
            E+  K+++ATKV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI KNNP+K +RSVGDGE VEFDVV GEKG EA+NV+GP+G PV+GS YAAD
Sbjct:   80 EDAEKKVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAAD 173
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BLAST of y-box protein ct-p40 vs. nr
Match: gi|1325296293|ref|XP_023330931.1| (Y-box factor homolog [Eurytemora affinis])

HSP 1 Score: 184.882 bits (468), Expect = 4.228e-53
Identity = 87/95 (91.58%), Postives = 92/95 (96.84%), Query Frame = 0 
Query:   53 KEEPPKELVATKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAILKNNPKKAVRSVGDGEVVEFDVVVGEKGNEASNVSGPEGAPVKGSPYAAD 147
            KEE  KE++ATKV+GTVKWFNVKSGYGFINRNDTKEDVFVHQTAI+KNNPKKAVRSVGDGEVVEFDVV+GEKGNEASNVSGPEG PVKGSPYAAD
Sbjct:   16 KEEAAKEVIATKVTGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVKNNPKKAVRSVGDGEVVEFDVVIGEKGNEASNVSGPEGVPVKGSPYAAD 110
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BLAST of y-box protein ct-p40 vs. nr
Match: gi|1069814383|ref|XP_018330652.1| (PREDICTED: Y-box factor homolog [Agrilus planipennis] >gi|1069814385|ref|XP_018330653.1| PREDICTED: Y-box factor homolog [Agrilus planipennis])

HSP 1 Score: 181.03 bits (458), Expect = 3.088e-51
Identity = 82/98 (83.67%), Postives = 94/98 (95.92%), Query Frame = 0 
Query:   58 KELVATKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAILKNNPKKAVRSVGDGEVVEFDVVVGEKGNEASNVSGPEGAPVKGSPYAADRKRGGFRR 155
            K+++ATKV+GTVKWFNVKSGYGFINRNDTKEDVFVHQ+AI+KNNPKKAVRSVGDGEVVEF VVVGEKGNEA+NV+GP G PV+GSPYAADR+RG +R+
Sbjct:   18 KQIIATKVTGTVKWFNVKSGYGFINRNDTKEDVFVHQSAIIKNNPKKAVRSVGDGEVVEFSVVVGEKGNEAANVTGPNGEPVRGSPYAADRRRGAYRQ 115
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BLAST of y-box protein ct-p40 vs. nr
Match: gi|22901740|gb|AAN10049.1| (Y-box protein Ct-p40 [Chironomus tentans])

HSP 1 Score: 179.104 bits (453), Expect = 4.538e-51
Identity = 85/119 (71.43%), Postives = 101/119 (84.87%), Query Frame = 0 
Query:   46 DEEAPLMKEEPPK--------ELVATKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAILKNNPKKAVRSVGDGEVVEFDVVVGEKGNEASNVSGPEGAPVKGSPYAADRKRGGFRRR 156
            D EAP ++ +P K        E++ATKV+GTVKWFNVKSGYGFINRND K+D+FVHQ+AI+KNNPKKAVRSVGDGEVVEFDVV GEKG+EA+NV+GPEG PVKGSPYAAD++RG +  R
Sbjct:    3 DTEAPAVEAQPQKTAAPPVQKEIIATKVTGTVKWFNVKSGYGFINRNDNKQDIFVHQSAIIKNNPKKAVRSVGDGEVVEFDVVAGEKGSEAANVTGPEGEPVKGSPYAADKRRGRYWSR 121
[Close]
BLAST of y-box protein ct-p40 vs. nr
Match: gi|22901742|gb|AAN10050.1| (Y-box protein Ct-p50 [Chironomus tentans])

HSP 1 Score: 180.644 bits (457), Expect = 5.042e-51
Identity = 85/119 (71.43%), Postives = 101/119 (84.87%), Query Frame = 0 
Query:   46 DEEAPLMKEEPPK--------ELVATKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAILKNNPKKAVRSVGDGEVVEFDVVVGEKGNEASNVSGPEGAPVKGSPYAADRKRGGFRRR 156
            D EAP ++ +P K        E++ATKV+GTVKWFNVKSGYGFINRND K+D+FVHQ+AI+KNNPKKAVRSVGDGEVVEFDVV GEKG+EA+NV+GPEG PVKGSPYAAD++RG +  R
Sbjct:    3 DTEAPAVEAQPQKTAAPPVQKEIIATKVTGTVKWFNVKSGYGFINRNDNKQDIFVHQSAIIKNNPKKAVRSVGDGEVVEFDVVAGEKGSEAANVTGPEGEPVKGSPYAADKRRGRYWSR 121
[Close]
BLAST of y-box protein ct-p40 vs. nr
Match: gi|1284995551|ref|XP_023023747.1| (Y-box factor homolog isoform X2 [Leptinotarsa decemlineata])

HSP 1 Score: 178.718 bits (452), Expect = 1.599e-50
Identity = 85/110 (77.27%), Postives = 98/110 (89.09%), Query Frame = 0 
Query:   47 EEAPLMKEEP-----PKELVATKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAILKNNPKKAVRSVGDGEVVEFDVVVGEKGNEASNVSGPEGAPVKGSPYAADRKRG 151
            E+  ++ E+P      KE++ATKV+GTVKWFNVKSGYGFINRNDTKEDVFVHQ+AI+KNNPKKAVRSVGDGEVVEF VVVGEKGNEA+NV+GP G PV+GSPYAADR+RG
Sbjct:    5 EQQQVVSEQPKAIQKQKEVIATKVTGTVKWFNVKSGYGFINRNDTKEDVFVHQSAIIKNNPKKAVRSVGDGEVVEFSVVVGEKGNEAANVTGPNGEPVRGSPYAADRRRG 114
[Close]
BLAST of y-box protein ct-p40 vs. nr
Match: gi|1284995549|ref|XP_023023739.1| (Y-box factor homolog isoform X1 [Leptinotarsa decemlineata])

HSP 1 Score: 178.333 bits (451), Expect = 2.968e-50
Identity = 85/110 (77.27%), Postives = 98/110 (89.09%), Query Frame = 0 
Query:   47 EEAPLMKEEP-----PKELVATKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAILKNNPKKAVRSVGDGEVVEFDVVVGEKGNEASNVSGPEGAPVKGSPYAADRKRG 151
            E+  ++ E+P      KE++ATKV+GTVKWFNVKSGYGFINRNDTKEDVFVHQ+AI+KNNPKKAVRSVGDGEVVEF VVVGEKGNEA+NV+GP G PV+GSPYAADR+RG
Sbjct:    5 EQQQVVSEQPKAIQKQKEVIATKVTGTVKWFNVKSGYGFINRNDTKEDVFVHQSAIIKNNPKKAVRSVGDGEVVEFSVVVGEKGNEAANVTGPNGEPVRGSPYAADRRRG 114
[Close]
BLAST of y-box protein ct-p40 vs. nr
Match: gi|1284995553|ref|XP_023023755.1| (Y-box factor homolog isoform X3 [Leptinotarsa decemlineata])

HSP 1 Score: 177.563 bits (449), Expect = 3.365e-50
Identity = 85/110 (77.27%), Postives = 98/110 (89.09%), Query Frame = 0 
Query:   47 EEAPLMKEEP-----PKELVATKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAILKNNPKKAVRSVGDGEVVEFDVVVGEKGNEASNVSGPEGAPVKGSPYAADRKRG 151
            E+  ++ E+P      KE++ATKV+GTVKWFNVKSGYGFINRNDTKEDVFVHQ+AI+KNNPKKAVRSVGDGEVVEF VVVGEKGNEA+NV+GP G PV+GSPYAADR+RG
Sbjct:    5 EQQQVVSEQPKAIQKQKEVIATKVTGTVKWFNVKSGYGFINRNDTKEDVFVHQSAIIKNNPKKAVRSVGDGEVVEFSVVVGEKGNEAANVTGPNGEPVRGSPYAADRRRG 114
[Close]
BLAST of y-box protein ct-p40 vs. nr
Match: gi|1339040408|ref|XP_023708633.1| (nuclease-sensitive element-binding protein 1 isoform X5 [Cryptotermes secundus])

HSP 1 Score: 176.022 bits (445), Expect = 7.500e-50
Identity = 81/94 (86.17%), Postives = 92/94 (97.87%), Query Frame = 0 
Query:   58 KELVATKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAILKNNPKKAVRSVGDGEVVEFDVVVGEKGNEASNVSGPEGAPVKGSPYAADRKRG 151
            K+++ATKV+GTVKWFNVKSGYGFINRNDTK+DVFVHQ+AI+KNNPKKAVRSVGDGEVVEFDVVVGEKGNEA+NV+GP G PVKGSPYAAD++RG
Sbjct:   17 KQVIATKVTGTVKWFNVKSGYGFINRNDTKDDVFVHQSAIVKNNPKKAVRSVGDGEVVEFDVVVGEKGNEAANVTGPNGEPVKGSPYAADKRRG 110
[Close]
BLAST of y-box protein ct-p40 vs. nr
Match: gi|1098679857|ref|XP_018799453.1| (PREDICTED: Y-box factor homolog isoform X2 [Bactrocera latifrons])

HSP 1 Score: 177.563 bits (449), Expect = 8.737e-50
Identity = 84/110 (76.36%), Postives = 98/110 (89.09%), Query Frame = 0 
Query:   41 VDEHGDEEAPLMKEEPPKELVATKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAILKNNPKKAVRSVGDGEVVEFDVVVGEKGNEASNVSGPEGAPVKGSPYAADRKR 150
            +DE GD     +K  PPKE++ATKV+GTVKWFNVKSGYGFINRNDTKEDVFVHQ+AI +NNPKKAVRSVGDGEVVEFDVV+GEKGNEA+NV+GP G PV+GS +AAD++R
Sbjct:   21 IDE-GDAVQAQLKSLPPKEVIATKVTGTVKWFNVKSGYGFINRNDTKEDVFVHQSAIARNNPKKAVRSVGDGEVVEFDVVIGEKGNEAANVTGPSGEPVRGSQFAADKRR 129
[Close]
BLAST of y-box protein ct-p40 vs. nr
Match: gi|1098679854|ref|XP_018799452.1| (PREDICTED: Y-box factor homolog isoform X1 [Bactrocera latifrons])

HSP 1 Score: 177.563 bits (449), Expect = 8.784e-50
Identity = 84/110 (76.36%), Postives = 98/110 (89.09%), Query Frame = 0 
Query:   41 VDEHGDEEAPLMKEEPPKELVATKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAILKNNPKKAVRSVGDGEVVEFDVVVGEKGNEASNVSGPEGAPVKGSPYAADRKR 150
            +DE GD     +K  PPKE++ATKV+GTVKWFNVKSGYGFINRNDTKEDVFVHQ+AI +NNPKKAVRSVGDGEVVEFDVV+GEKGNEA+NV+GP G PV+GS +AAD++R
Sbjct:   21 IDE-GDAVQAQLKSLPPKEVIATKVTGTVKWFNVKSGYGFINRNDTKEDVFVHQSAIARNNPKKAVRSVGDGEVVEFDVVIGEKGNEAANVTGPSGEPVRGSQFAADKRR 129
The following BLAST results are available for this feature:
BLAST of y-box protein ct-p40 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAG000000016102.783e-5192.22supercontig:LSalAtl2s:LSalAtl2s1280:88137:89193:-1... [more]
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BLAST of y-box protein ct-p40 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
gi|1175568|sp|P41824.1|YBOXH_APLCA2.985e-4775.73RecName: Full=Y-box factor homolog; AltName: Full=... [more]
gi|140245|sp|P21573.1|YBOX1_XENLA2.283e-4480.00RecName: Full=Nuclease-sensitive element-binding p... [more]
gi|6166111|sp|Q62764.1|YBOX3_RAT1.899e-4274.75RecName: Full=Y-box-binding protein 3; AltName: Fu... [more]
gi|51704186|sp|P62961.3|YBOX1_RAT2.255e-4278.89RecName: Full=Nuclease-sensitive element-binding p... [more]
gi|54040030|sp|P67808.3|YBOX1_BOVIN2.267e-4278.89RecName: Full=Nuclease-sensitive element-binding p... [more]
gi|75069491|sp|Q28618.3|YBOX1_RABIT2.365e-4278.89RecName: Full=Nuclease-sensitive element-binding p... [more]
gi|465508|sp|Q06066.1|YBOX1_CHICK4.067e-4278.89RecName: Full=Nuclease-sensitive element-binding p... [more]
gi|61212920|sp|Q9JKB3.2|YBOX3_MOUSE4.271e-4274.75RecName: Full=Y-box-binding protein 3; AltName: Fu... [more]
gi|140247|sp|Q00436.1|YB3_XENLA1.397e-4177.78RecName: Full=B box-binding protein; AltName: Full... [more]
gi|97536050|sp|P16989.4|YBOX3_HUMAN1.794e-4176.60RecName: Full=Y-box-binding protein 3; AltName: Fu... [more]

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BLAST of y-box protein ct-p40 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|1325296293|ref|XP_023330931.1|4.228e-5391.58Y-box factor homolog [Eurytemora affinis][more]
gi|1069814383|ref|XP_018330652.1|3.088e-5183.67PREDICTED: Y-box factor homolog [Agrilus planipenn... [more]
gi|22901740|gb|AAN10049.1|4.538e-5171.43Y-box protein Ct-p40 [Chironomus tentans][more]
gi|22901742|gb|AAN10050.1|5.042e-5171.43Y-box protein Ct-p50 [Chironomus tentans][more]
gi|1284995551|ref|XP_023023747.1|1.599e-5077.27Y-box factor homolog isoform X2 [Leptinotarsa dece... [more]
gi|1284995549|ref|XP_023023739.1|2.968e-5077.27Y-box factor homolog isoform X1 [Leptinotarsa dece... [more]
gi|1284995553|ref|XP_023023755.1|3.365e-5077.27Y-box factor homolog isoform X3 [Leptinotarsa dece... [more]
gi|1339040408|ref|XP_023708633.1|7.500e-5086.17nuclease-sensitive element-binding protein 1 isofo... [more]
gi|1098679857|ref|XP_018799453.1|8.737e-5076.36PREDICTED: Y-box factor homolog isoform X2 [Bactro... [more]
gi|1098679854|ref|XP_018799452.1|8.784e-5076.36PREDICTED: Y-box factor homolog isoform X1 [Bactro... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold627_size122700supercontigscaffold627_size122700:115..1798 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
NoteP:regulation of transcription
Note DNA-dependent
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold627_size122700-snap-gene-0.27-mRNA-1maker-scaffold627_size122700-snap-gene-0.27-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold627_size122700:115..1798+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold627_size122700-snap-gene-0.27 ID=maker-scaffold627_size122700-snap-gene-0.27|Name=y-box protein ct-p40|organism=Tigriopus kingsejongensis|type=gene|length=1684bp|location=Sequence derived from alignment at scaffold627_size122700:115..1798+ (Tigriopus kingsejongensis)
AGACAAGTCGTAGGGGGATAAATCGTGGTAAGAATCGGGCCAATGCGACT
CCCTCCGGATCAGGCGCCCTCGTGGGGCGACTTCGGCGCCGCCGGGGGCC
CGTGCTAGAGAGGCGTGGGCTCACCCGCCTTTGCTCGTTTCAGGTACGAC
CTACCACCCGCAGGACCATCTGCTCCCATTGACCATCACACGCGAACGCG
GCGCTTCCATCCTGGCCGCCCAGCAGCATCCAGCTCAACATCACGTCTAA
CATCAGCATGAGCGACACCACCGTCGTCGAGACCACCCCGGCCACCGGCA
GCCTGAACAACAACAACGCCGTCACCAGCGCGACCACCAGCAGCAACCCG
GCCTCACCCCCTAACGGCACGGTGGCCGTCGACGAGCACGGCGATGAGGA
GGCCCCCTTGATGAAGGAGGAGCCCCCCAAGGAACTGGTGGCTACCAAGG
TGTCGGGCACCGTCAAGTGGTTCAATGTCAAGTCCGGATACGGCTTCATT
AACCGCAATGACACCAAGGAGGACGTGTTCGTCCACCAGACGGCCATCCT
CAAGAACAACCCCAAGAAGGCCGTTCGCAGCGTGGGCGACGGCGAGGTGG
TCGAGTTTGACGTGGTCGTCGGCGAGAAGGGCAACGAGGCATCTAATGTC
TCGGGCCCTGAAGGCGCACCCGTCAAGGGATCGCCCTATGCCGCCGACCG
GAAACGCGGCGGCTTCCGCCGCCGTGGCGGCCCGCCCGGCCGCGGCGGTG
GGGGTGGATTCTTCCGAGGCGGTCGCGGCGGAGGACTCGGAGGTCACGGC
GATGGGGATGAGGAAGCCGAACTGGACCTGGAAGATGACGGCGGATTCGG
CCGGCGTGGTGGCTCCAGAGGCGGCCGCTTCCCGGACCGCTACGTGCGTC
GTCGGGGCAAGTCCCTGAGCAAGGAAGACGGCGAGGAAGGCGTAAGTGCC
CGGACGCACCCTCAACCCCATTCGACGTGGAACTAATGTTCGTCGCCTTG
TTCTTTTAGGATGCCCTGTCCGATGGTAACTCGACGGGTGGACGCGGCGG
TCGAGGCTCGCGGGGTCGAGCGCCATTCCGTGGCGGTGGCGGCTTCCGAG
GCCGAGGGAGAGGTGCGCCTTTCCGAGGGAACGGCGGCGACTCATTCCGC
GGTAGCAAGCCCCGAGGGCGTGGTGTGCCCAACTTCCGAGGTCGGGGCTT
GCCCCGTGGAACCGGGCGAGGCCTGGGTCGGGGCTCTCCTCGCGGCACCC
GAGGTGGTAGCAACCCTCCATCCGGCTCCGAGTAAAGCAGCCGCCACCCT
CTTTATCTTATGCTCGTCTCATATGAAACATGAAATCCTCGTAACTACCA
CCCACTCCGGAGCTAGGAGCCCGTGGTCGTGTCCGTTGGGCCAGCCTGAA
GCTACCCATCCAATATCGCCCCTTCCCCCCTCCTCGAGATGACTATCCGA
CACTGATCCGGCTCGCTTAGCTCCCAACCCTCCCGGCTCTGCCTCTCCAT
TCCCATCCTCCCGAGCATGGGAGGCAATTTTTGAACGGGGATGCCTGCGG
GGCACAGCCTCAAACTTGCGCTCCACGCGGTGCACCCGCGTTCCCGTTCC
CCCAAGTTATGCGACGACTCCCATCTCTCAACCTTACAAAAATGTCGGCA
TAACCAATGTTTGAATAAAATTTGTTTTAAATTT
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Synonyms
The feature 'y-box protein ct-p40' has the following synonyms
Synonym
Tk10648
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