cdc42 homolog, maker-scaffold627_size122700-snap-gene-0.30 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of cdc42 homolog vs. L. salmonis genes
Match: EMLSAG00000000880 (supercontig:LSalAtl2s:LSalAtl2s1152:93052:93616:-1 gene:EMLSAG00000000880 transcript:EMLSAT00000000880 description:"maker-LSalAtl2s1152-augustus-gene-0.18") HSP 1 Score: 316.62 bits (810), Expect = 1.692e-112 Identity = 150/162 (92.59%), Postives = 157/162 (96.91%), Query Frame = 0 Query: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEISHHCQKTPFLLVGTQIDLRDDAATIEKLAKNKQKPLSNEVGEKLSKELKAVKYVECSALTQ 162 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVC+SVVSPSS+ENV+EKWVPEISHHCQ+TPFL VG QI LRD+AATIEKL KNKQKPLS EVGEKL+KELKAV+YVECSALTQ Sbjct: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCYSVVSPSSYENVREKWVPEISHHCQRTPFLXVGXQIXLRDEAATIEKLTKNKQKPLSMEVGEKLAKELKAVRYVECSALTQ 162
BLAST of cdc42 homolog vs. L. salmonis genes
Match: EMLSAG00000000691 (supercontig:LSalAtl2s:LSalAtl2s110:223932:225715:1 gene:EMLSAG00000000691 transcript:EMLSAT00000000691 description:"maker-LSalAtl2s110-augustus-gene-2.2") HSP 1 Score: 262.692 bits (670), Expect = 1.351e-90 Identity = 127/196 (64.80%), Postives = 151/196 (77.04%), Query Frame = 0 Query: 2 QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEISHHCQKTPFLLVGTQIDLRDDAATIEKLAKNKQKPLSNEVGEKLSKELKAVKYVECSALTQKGLKNVFDEAILAALEPPEPPRK--------RRCC 189 +TIKCVVVGDGAVGKTC+LISY T+KFP EYVPTVFDNY V VMIG +PYTLGLFDTAGQEDYD LR L YP TD+FLVCFSV+ P+SF NV++KW E+ + K P LLVGTQ+DLR+D T E L+K KQKP++ E G L+KE+ AV+Y ECSA+TQ GLK+VFDEAI+A LE P ++ R CC Sbjct: 7 KTIKCVVVGDGAVGKTCMLISYATDKFPQEYVPTVFDNYMVNVMIGDDPYTLGLFDTAGQEDYDNLRHLCYPNTDIFLVCFSVIRPNSFANVRQKWSSEVKKY-YKAPILLVGTQVDLRNDEKTKEALSKCKQKPITEEQGRSLAKEIGAVRYSECSAITQNGLKDVFDEAIIAVLERPSSGKEDSNGGNPLRACC 201
BLAST of cdc42 homolog vs. L. salmonis genes
Match: EMLSAG00000006917 (supercontig:LSalAtl2s:LSalAtl2s391:521398:525466:1 gene:EMLSAG00000006917 transcript:EMLSAT00000006917 description:"maker-LSalAtl2s391-augustus-gene-5.30") HSP 1 Score: 262.307 bits (669), Expect = 1.511e-90 Identity = 124/189 (65.61%), Postives = 149/189 (78.84%), Query Frame = 0 Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEISHHCQKTPFLLVGTQIDLRDDAATIEKLAKNKQKPLSNEVGEKLSKELKAVKYVECSALTQKGLKNVFDEAILAALEP-PEPPRKRRCCLL 191 IKCVVVGDG VGKTC+LISYTT+ FP EYVPTVFDNY+ ++ G P +LGL+DTAGQED DRLRPLSYPQTDVFL+ FSVVSPSSFENV KW PEI HHC P LLVGT+IDLR+D T++ LA Q P+ E G+KL +++AVKY+ECSALTQ+GLK VFDEA+ + L P P R+++C +L Sbjct: 7 IKCVVVGDGTVGKTCMLISYTTDSFPGEYVPTVFDNYSAPMVCDGVPVSLGLWDTAGQEDXDRLRPLSYPQTDVFLITFSVVSPSSFENVTSKWCPEIKHHCADAPILLVGTKIDLREDKETLQALADAGQAPIKREQGQKLCNKIRAVKYLECSALTQRGLKQVFDEAVRSVLRPQPVRRRQKKCQIL 195
BLAST of cdc42 homolog vs. L. salmonis genes
Match: EMLSAG00000012355 (supercontig:LSalAtl2s:LSalAtl2s903:193189:193806:1 gene:EMLSAG00000012355 transcript:EMLSAT00000012355 description:"augustus_masked-LSalAtl2s903-processed-gene-1.2") HSP 1 Score: 201.83 bits (512), Expect = 1.411e-66 Identity = 97/176 (55.11%), Postives = 127/176 (72.16%), Query Frame = 0 Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEI-SHHCQKTPFLLVGTQIDLRDDAATIEKLAKNKQKPLSNEVGEKLSKELKAVKYVECSALTQKGLKNVFDEAILAALE 178 IKCV +GDGAVGKT L+++YTT+ + SEYVPT D Y V V + G P T + DT GQED+D LRPL YP TDVF++CFSVVSP+SF+N+KEKW+PE+ +KTP LLVGTQ DLR+D T+ +L +N + P++ +K++ L YVE SALTQK LK +FDEAI ++ Sbjct: 12 IKCVFLGDGAVGKTSLIVAYTTDGYTSEYVPTAIDTYDVVVRVDGVPLTFEMCDTPGQEDFDDLRPLVYPNTDVFILCFSVVSPTSFKNIKEKWIPELKKRSSRKTPVLLVGTQSDLREDVNTLLELNRNYEAPVTENEAKKMASALGCKGYVESSALTQKNLKEIFDEAITLGIK 187
BLAST of cdc42 homolog vs. L. salmonis genes
Match: EMLSAG00000001745 (supercontig:LSalAtl2s:LSalAtl2s12:127607:129096:-1 gene:EMLSAG00000001745 transcript:EMLSAT00000001745 description:"maker-LSalAtl2s12-snap-gene-1.31") HSP 1 Score: 188.348 bits (477), Expect = 4.234e-61 Identity = 87/161 (54.04%), Postives = 116/161 (72.05%), Query Frame = 0 Query: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEISHHCQKTPFLLVGTQIDLRDDAATIEKLAKNKQKPLSNEVGEKLSKELKAVKYVECSALTQKGL 165 K V+VGDGA GKTCLLI ++ ++FP YVPTVF+NY + + L L+DTAGQEDYDRLRPLSYP TDV L+CFS+ SP S EN+ EKW PE+ H C P +LVG + DLR+D TI++L K KQ+P+ E G +++++ A Y+ECSA +++GL Sbjct: 64 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEV-----ELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPNTIKELGKMKQEPVKPEDGRTMAEKINAFAYLECSAKSKEGL 219
BLAST of cdc42 homolog vs. L. salmonis genes
Match: EMLSAG00000002241 (supercontig:LSalAtl2s:LSalAtl2s1425:37157:38278:-1 gene:EMLSAG00000002241 transcript:EMLSAT00000002241 description:"maker-LSalAtl2s1425-augustus-gene-0.6") HSP 1 Score: 163.31 bits (412), Expect = 2.515e-51 Identity = 81/180 (45.00%), Postives = 111/180 (61.67%), Query Frame = 0 Query: 2 QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEISHHCQKTPFLLVGTQIDLRDDAATIEKLAKNKQKPLSNEVGEKLSKELKAVKYVECSALTQKGLKNVFDEAILAALEPPE 181 + IK VVVGDGA GKT LL+SY N FP + PTVFD ++ L L+DTAGQEDYDRLRPL+Y DVFL+CF++ S +S N K KW PE++ H P LL+G + DLR D+ +I K G +++ +K VKY+ECS+L ++G+ VF+ A+ A + P + Sbjct: 9 KDIKLVVVGDGAXGKTSLLVSYARNHFPESHDPTVFDCITTSLQRHNIKIKLNLWDTAGQEDYDRLRPLAYHHADVFLLCFALNSNASLYNAKAKWAPELNKHSN-APVLLIGLKADLRKDSNSISK-----------REGSDIARSIKTVKYLECSSLKREGVTTVFESAVDAVILPKK 176
BLAST of cdc42 homolog vs. L. salmonis genes
Match: EMLSAG00000000863 (supercontig:LSalAtl2s:LSalAtl2s1149:7505:31613:1 gene:EMLSAG00000000863 transcript:EMLSAT00000000863 description:"maker-LSalAtl2s1149-augustus-gene-0.4") HSP 1 Score: 127.102 bits (318), Expect = 1.032e-35 Identity = 67/179 (37.43%), Postives = 97/179 (54.19%), Query Frame = 0 Query: 2 QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEISHHCQKTPFLLVGTQIDLRDDAATIEKLAKNKQKPLSNEVGEKLSKELKAVKYVECSALTQKGLKNVFDEAILAALEPP 180 ++I V+VGD +GK+ L+ T N F EY PT FD AV + G+ L+DT+G YD +R L Y + VFL+CF + P+S +V+ KW+ E+ H + P +L G Q DLR D TI L+K + P++ E + E+ AV YVE S+ VF+ + A PP Sbjct: 10 RSITVVLVGDTKIGKSALINRITKNAFSQEYTPTSFDKVAVKRNVEGKWLEFALWDTSGCSAYDNVRSLPYEEAHVFLLCFKISDPASLSSVRHKWMKELRRHRPEVPIILCGCQADLRHDPPTIASLSKMGRSPVAPEQALAVCCEIDAVSYVETSSKEGDSFYEVFE--VCAHAAPP 186
BLAST of cdc42 homolog vs. L. salmonis genes
Match: EMLSAG00000012715 (supercontig:LSalAtl2s:LSalAtl2s965:433029:434186:-1 gene:EMLSAG00000012715 transcript:EMLSAT00000012715 description:"maker-LSalAtl2s965-snap-gene-3.54") HSP 1 Score: 108.612 bits (270), Expect = 6.806e-31 Identity = 57/155 (36.77%), Postives = 79/155 (50.97%), Query Frame = 0 Query: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEISHHCQKTPFLLVGTQIDLRDDAATIEKLAKNKQKPLSNEVGEKLSKELKAVKYVECSA 159 K VVVGDGA GKT LL + T FP QE YDRLR L+YP DV ++CF++ P + NV+++W+PE+ HC+ P LLVG +IDLRDD + L K ++ P+ ++ + A + ECSA Sbjct: 11 KLVVVGDGACGKTSLLTVFKTGIFPKS-----------------------------QEFYDRLRILTYP-ADVIIICFAIDRPETLANVRKRWIPEVRQHCKGVPILLVGNKIDLRDDRMVLSNLRKVQKAPVLFAETRSMAYSINATAFHECSA 135
BLAST of cdc42 homolog vs. L. salmonis genes
Match: EMLSAG00000001832 (supercontig:LSalAtl2s:LSalAtl2s1315:101571:120466:-1 gene:EMLSAG00000001832 transcript:EMLSAT00000001832 description:"maker-LSalAtl2s1315-augustus-gene-1.4") HSP 1 Score: 90.1225 bits (222), Expect = 2.125e-23 Identity = 41/107 (38.32%), Postives = 63/107 (58.88%), Query Frame = 0 Query: 53 LGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEISHHCQKTPFLLVGTQIDLRDDAATIEKLAKNKQKPLSNEVGEKLSKELKAVKYVECSA 159 ++DT+G YD +R LSY + DVFL+C+ + P+S NVK KW E+ H P +L G +LR D+ T+ +L+K + P++ E + E+ AV Y+E SA Sbjct: 2 FSIWDTSGFPSYDAIRSLSYQEADVFLLCYKISDPASLYNVKNKWSAEVRRHRPDVPIILCGXHSELRHDSVTMAQLSKTGRSPVTIEQALAICCEIXAVNYIETSA 108
BLAST of cdc42 homolog vs. L. salmonis genes
Match: EMLSAG00000009627 (supercontig:LSalAtl2s:LSalAtl2s619:14755:19285:-1 gene:EMLSAG00000009627 transcript:EMLSAT00000009627 description:"snap_masked-LSalAtl2s619-processed-gene-0.6") HSP 1 Score: 92.8189 bits (229), Expect = 1.611e-22 Identity = 68/203 (33.50%), Postives = 105/203 (51.72%), Query Frame = 0 Query: 2 QTIKCVVVGDGAVGKTCLLIS------YTTNKFPSEYVPTVF--DNYAVT--------VMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEISHHCQKTPFLLVGTQIDLRDDAATIEKLAKNKQK-PLSNEV----------GEKLSKELKAVKYVECSALTQKGLKNVFDEAILAAL 177 + +KCV+VGD AVGKT L + + ++ + +VPTV+ D Y + +++ G +L L+DT G D+ + R +Y ++DV L+CF + SS EN +E W +I C TP +LVG + D+R + + K++ PL +V G ++ EL + Y E S LT GL VF+ AI AAL Sbjct: 9 ELVKCVLVGDNAVGKTRLXCARACKQKVSLSQLLNTHVPTVWAIDQYRIYKDVLENSWMVLDGVNVSLRLWDTFG--DHHKDRRFAYGRSDVVLMCFDIGRVSSLENCREMWYQQIRKFCPNTPVILVGCKNDVRFILHDEQYINYCKERSPLVRQVRERDLVFPEQGRAVANEL-GIPYYETSVLTYYGLNEVFENAIRAAL 208
BLAST of cdc42 homolog vs. SwissProt
Match: gi|46397673|sp|P60763.1|RAC3_HUMAN (RecName: Full=Ras-related C3 botulinum toxin substrate 3; AltName: Full=p21-Rac3; Flags: Precursor >gi|46397674|sp|P60764.1|RAC3_MOUSE RecName: Full=Ras-related C3 botulinum toxin substrate 3; AltName: Full=p21-Rac3; Flags: Precursor) HSP 1 Score: 272.322 bits (695), Expect = 3.902e-93 Identity = 125/177 (70.62%), Postives = 147/177 (83.05%), Query Frame = 0 Query: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEISHHCQKTPFLLVGTQIDLRDDAATIEKLAKNKQKPLSNEVGEKLSKELKAVKYVECSALTQKGLKNVFDEAILAAL 177 MQ IKCVVVGDGAVGKTCLLISYTTN FP EY+PTVFDNY+ VM+ G+P LGL+DTAGQEDYDRLRPLSYPQTDVFL+CFS+VSP+SFENV+ KW PE+ HHC TP LLVGT++DLRDD TIE+L K P++ G +++E+ +VKY+ECSALTQ+GLK VFDEAI A L Sbjct: 1 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPHTPILLVGTKLDLRDDKDTIERLRDKKLAPITYPQGLAMAREIGSVKYLECSALTQRGLKTVFDEAIRAVL 177
BLAST of cdc42 homolog vs. SwissProt
Match: gi|13878932|sp|P34144.2|RAC1A_DICDI (RecName: Full=Rho-related protein rac1A; Flags: Precursor) HSP 1 Score: 270.396 bits (690), Expect = 2.573e-92 Identity = 126/186 (67.74%), Postives = 148/186 (79.57%), Query Frame = 0 Query: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEISHHCQKTPFLLVGTQIDLRDDAATIEKLAKNKQKPLSNEVGEKLSKELKAVKYVECSALTQKGLKNVFDEAILAALEPPEPPRKR 186 MQ IKCVVVGDGAVGKTCLLISYTTN FP EY+PTVFDNY+ VM+ G+P LGL+DTAGQEDYDRLRPLSYPQTDVFL+CFS++SPSSFENV KW PEI HH P +LVGT++D+R+D T ++L + K P+S E G KE+ AVKY+ECSALTQKGLK VFDEAI A + PP +K+ Sbjct: 1 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSIISPSSFENVNGKWHPEICHHAPNVPIILVGTKLDMREDKETQDRLKEKKLYPISYEQGLAKMKEINAVKYLECSALTQKGLKTVFDEAIRAVINPPLSKKKK 186
BLAST of cdc42 homolog vs. SwissProt
Match: gi|2500186|sp|Q24814.1|RACA_ENTHI (RecName: Full=Rho-related protein racA; Flags: Precursor) HSP 1 Score: 269.24 bits (687), Expect = 8.795e-92 Identity = 126/195 (64.62%), Postives = 154/195 (78.97%), Query Frame = 0 Query: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEISHHCQKTPFLLVGTQIDLRDDAATIEKLAKNKQKPLSNEVGEKLSKELKAVKYVECSALTQKGLKNVFDEAILAALEPPEPPRK----RRCCLL 191 MQ +KCV+VGDGAVGKTCLLISYTTN FP+EY+PTVFDNY+ TVM+ +P LGL+DTAGQEDYDRLRPLSYPQTDVFL+CFSVVSP SF+NV KW PE+SHHC KTP LLVGT++D+R+D +++L + K P++ E GE K++ AVKY+ECSALTQK L+ VFDEA+ A + P +K R CLL Sbjct: 1 MQAVKCVIVGDGAVGKTCLLISYTTNAFPNEYIPTVFDNYSATVMVDSKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSVVSPPSFDNVSSKWQPEVSHHCPKTPCLLVGTKLDMREDKEQLKRLEEKKITPITTEQGEAKCKDIGAVKYIECSALTQKNLRLVFDEAVRAVISPAGGAKKDKKNNRGCLL 195
BLAST of cdc42 homolog vs. SwissProt
Match: gi|62906861|sp|P17081.2|RHOQ_HUMAN (RecName: Full=Rho-related GTP-binding protein RhoQ; AltName: Full=Ras-like protein TC10; AltName: Full=Ras-like protein family member 7A; Flags: Precursor) HSP 1 Score: 267.7 bits (683), Expect = 3.810e-91 Identity = 128/195 (65.64%), Postives = 155/195 (79.49%), Query Frame = 0 Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEISHHCQKTPFLLVGTQIDLRDDAATIEKLAKNKQKPLSNEVGEKLSKELKAVKYVECSALTQKGLKNVFDEAILAALEPPEPPRKRR-------CCLL 191 +KCVVVGDGAVGKTCLL+SY + FP EYVPTVFD+YAV+V +GG+ Y LGL+DTAGQEDYDRLRPLSYP TDVFL+CFSVV+P+SF+NVKE+WVPE+ + PFLL+GTQIDLRDD T+ +L K+KP+ E G+KL+KE+ A YVECSALTQKGLK VFDEAI+A L P + K+R CCL+ Sbjct: 10 LKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQIDLRDDPKTLARLNDMKEKPICVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAILTPKKHTVKKRIGSRCINCCLI 204
BLAST of cdc42 homolog vs. SwissProt
Match: gi|62900759|sp|Q9JJL4.1|RHOQ_RAT (RecName: Full=Rho-related GTP-binding protein RhoQ; AltName: Full=Ras-like protein TC10; Flags: Precursor >gi|62901037|sp|Q8R527.2|RHOQ_MOUSE RecName: Full=Rho-related GTP-binding protein RhoQ; AltName: Full=Ras-like protein TC10; Flags: Precursor) HSP 1 Score: 267.314 bits (682), Expect = 5.589e-91 Identity = 128/195 (65.64%), Postives = 155/195 (79.49%), Query Frame = 0 Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEISHHCQKTPFLLVGTQIDLRDDAATIEKLAKNKQKPLSNEVGEKLSKELKAVKYVECSALTQKGLKNVFDEAILAALEPPEPPRKRR-------CCLL 191 +KCVVVGDGAVGKTCLL+SY + FP EYVPTVFD+YAV+V +GG+ Y LGL+DTAGQEDYDRLRPLSYP TDVFL+CFSVV+P+SF+NVKE+WVPE+ + PFLL+GTQIDLRDD T+ +L K+KP+ E G+KL+KE+ A YVECSALTQKGLK VFDEAI+A L P + K+R CCL+ Sbjct: 10 LKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAILTPKKHTVKKRIGSRCINCCLI 204
BLAST of cdc42 homolog vs. nr
Match: gi|766934573|ref|XP_011499613.1| (PREDICTED: cdc42 homolog [Ceratosolen solmsi marchali]) HSP 1 Score: 378.252 bits (970), Expect = 1.419e-132 Identity = 182/191 (95.29%), Postives = 187/191 (97.91%), Query Frame = 0 Query: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEISHHCQKTPFLLVGTQIDLRDDAATIEKLAKNKQKPLSNEVGEKLSKELKAVKYVECSALTQKGLKNVFDEAILAALEPPEPPRKRRCCLL 191 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEI+HHCQKTPFLLVGTQIDLRDDAATIEKLAKNKQKP++ E GEKL+KELKAVKYVECSALTQKGLKNVFDEAILAALEPPEP R+RRC LL Sbjct: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCQKTPFLLVGTQIDLRDDAATIEKLAKNKQKPITGEQGEKLAKELKAVKYVECSALTQKGLKNVFDEAILAALEPPEPVRRRRCILL 191
BLAST of cdc42 homolog vs. nr
Match: gi|1241828636|gb|PBC25182.1| (hypothetical protein APICC_01946 [Apis cerana cerana]) HSP 1 Score: 378.637 bits (971), Expect = 1.582e-132 Identity = 182/191 (95.29%), Postives = 187/191 (97.91%), Query Frame = 0 Query: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEISHHCQKTPFLLVGTQIDLRDDAATIEKLAKNKQKPLSNEVGEKLSKELKAVKYVECSALTQKGLKNVFDEAILAALEPPEPPRKRRCCLL 191 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEI+HHCQKTPFLLVGTQIDLRDDAATIEKLAKNKQKP+S E GEKL+KELKAVKYVECSALTQKGLKNVFDEAILAALEPPEP R+RRC +L Sbjct: 13 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCQKTPFLLVGTQIDLRDDAATIEKLAKNKQKPISAEQGEKLAKELKAVKYVECSALTQKGLKNVFDEAILAALEPPEPVRRRRCIVL 203
BLAST of cdc42 homolog vs. nr
Match: gi|1059864994|ref|XP_017799321.1| (PREDICTED: cdc42 homolog isoform X1 [Habropoda laboriosa] >gi|1059864996|ref|XP_017799322.1| PREDICTED: cdc42 homolog isoform X1 [Habropoda laboriosa] >gi|915666112|gb|KOC68017.1| Cdc42 like protein [Habropoda laboriosa]) HSP 1 Score: 378.252 bits (970), Expect = 1.826e-132 Identity = 182/191 (95.29%), Postives = 187/191 (97.91%), Query Frame = 0 Query: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEISHHCQKTPFLLVGTQIDLRDDAATIEKLAKNKQKPLSNEVGEKLSKELKAVKYVECSALTQKGLKNVFDEAILAALEPPEPPRKRRCCLL 191 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEI+HHCQKTPFLLVGTQIDLRDDAATIEKLAKNKQKP+S E GEKL+KELKAVKYVECSALTQKGLKNVFDEAILAALEPPEP R+RRC +L Sbjct: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCQKTPFLLVGTQIDLRDDAATIEKLAKNKQKPISAEQGEKLAKELKAVKYVECSALTQKGLKNVFDEAILAALEPPEPVRRRRCIIL 191
BLAST of cdc42 homolog vs. nr
Match: gi|340709714|ref|XP_003393447.1| (cdc42 homolog [Bombus terrestris] >gi|350420541|ref|XP_003492543.1| cdc42 homolog [Bombus impatiens] >gi|383864793|ref|XP_003707862.1| PREDICTED: cdc42 homolog [Megachile rotundata] >gi|572314070|ref|XP_006622715.1| PREDICTED: cdc42 homolog isoform X1 [Apis dorsata] >gi|572314072|ref|XP_006622716.1| PREDICTED: cdc42 homolog isoform X2 [Apis dorsata] >gi|572314076|ref|XP_006622718.1| PREDICTED: cdc42 homolog isoform X4 [Apis dorsata] >gi|805823149|ref|XP_012151555.1| PREDICTED: cdc42 homolog [Megachile rotundata] >gi|805823151|ref|XP_012151556.1| PREDICTED: cdc42 homolog [Megachile rotundata] >gi|815921578|ref|XP_012245661.1| cdc42 homolog [Bombus impatiens] >gi|815921580|ref|XP_012245662.1| cdc42 homolog [Bombus impatiens] >gi|815921582|ref|XP_012245663.1| cdc42 homolog [Bombus impatiens] >gi|1035597779|ref|XP_016906263.1| PREDICTED: cdc42 homolog isoform X1 [Apis cerana] >gi|1035597781|ref|XP_016906264.1| PREDICTED: cdc42 homolog isoform X1 [Apis cerana] >gi|1035597783|ref|XP_016906265.1| PREDICTED: cdc42 homolog isoform X1 [Apis cerana] >gi|1059222178|ref|XP_017764859.1| PREDICTED: cdc42 homolog [Eufriesea mexicana] >gi|1061100576|ref|XP_017877070.1| PREDICTED: cdc42 homolog [Ceratina calcarata] >gi|1061100578|ref|XP_017877071.1| PREDICTED: cdc42 homolog [Ceratina calcarata] >gi|1061100580|ref|XP_017877072.1| PREDICTED: cdc42 homolog [Ceratina calcarata] >gi|1185555439|ref|XP_020721193.1| cdc42 homolog [Bombus terrestris] >gi|1185555441|ref|XP_020721198.1| cdc42 homolog [Bombus terrestris] >gi|1185555443|ref|XP_020721202.1| cdc42 homolog [Bombus terrestris] >gi|1026544515|gb|OAD52173.1| Cdc42 like protein [Eufriesea mexicana]) HSP 1 Score: 377.867 bits (969), Expect = 2.200e-132 Identity = 182/191 (95.29%), Postives = 187/191 (97.91%), Query Frame = 0 Query: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEISHHCQKTPFLLVGTQIDLRDDAATIEKLAKNKQKPLSNEVGEKLSKELKAVKYVECSALTQKGLKNVFDEAILAALEPPEPPRKRRCCLL 191 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEI+HHCQKTPFLLVGTQIDLRDDAATIEKLAKNKQKP+S E GEKL+KELKAVKYVECSALTQKGLKNVFDEAILAALEPPEP R+RRC +L Sbjct: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCQKTPFLLVGTQIDLRDDAATIEKLAKNKQKPISAEQGEKLAKELKAVKYVECSALTQKGLKNVFDEAILAALEPPEPVRRRRCIVL 191
BLAST of cdc42 homolog vs. nr
Match: gi|919002271|ref|XP_013411418.1| (cdc42 homolog [Lingula anatina]) HSP 1 Score: 377.867 bits (969), Expect = 2.623e-132 Identity = 181/191 (94.76%), Postives = 188/191 (98.43%), Query Frame = 0 Query: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEISHHCQKTPFLLVGTQIDLRDDAATIEKLAKNKQKPLSNEVGEKLSKELKAVKYVECSALTQKGLKNVFDEAILAALEPPEPPRKRRCCLL 191 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEI+HHCQKTPFLLVGTQ+DLRDDAATIEKLAKNKQKP+S E GEKL+KELKAVKYVECSALTQ+GLKNVFDEAILAALEPPEPP+KR+C LL Sbjct: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCQKTPFLLVGTQVDLRDDAATIEKLAKNKQKPISPEQGEKLAKELKAVKYVECSALTQRGLKNVFDEAILAALEPPEPPKKRKCLLL 191
BLAST of cdc42 homolog vs. nr
Match: gi|817188290|ref|XP_012288707.1| (cdc42 homolog [Orussus abietinus] >gi|817188292|ref|XP_012288709.1| cdc42 homolog [Orussus abietinus]) HSP 1 Score: 377.867 bits (969), Expect = 2.681e-132 Identity = 181/191 (94.76%), Postives = 187/191 (97.91%), Query Frame = 0 Query: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEISHHCQKTPFLLVGTQIDLRDDAATIEKLAKNKQKPLSNEVGEKLSKELKAVKYVECSALTQKGLKNVFDEAILAALEPPEPPRKRRCCLL 191 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEI+HHCQKTPFLLVGTQIDLRDDAATIEKLAKNKQKP++ E GEKL+KELKAVKYVECSALTQKGLKNVFDEAILAALEPPEP R+RRC +L Sbjct: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCQKTPFLLVGTQIDLRDDAATIEKLAKNKQKPITGEQGEKLAKELKAVKYVECSALTQKGLKNVFDEAILAALEPPEPVRRRRCVIL 191
BLAST of cdc42 homolog vs. nr
Match: gi|936706417|ref|XP_014231172.1| (cdc42 homolog [Trichogramma pretiosum] >gi|936706420|ref|XP_014231173.1| cdc42 homolog [Trichogramma pretiosum] >gi|936706422|ref|XP_014231174.1| cdc42 homolog [Trichogramma pretiosum] >gi|936706424|ref|XP_014231175.1| cdc42 homolog [Trichogramma pretiosum] >gi|936706426|ref|XP_014231176.1| cdc42 homolog [Trichogramma pretiosum]) HSP 1 Score: 377.096 bits (967), Expect = 4.023e-132 Identity = 181/191 (94.76%), Postives = 187/191 (97.91%), Query Frame = 0 Query: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEISHHCQKTPFLLVGTQIDLRDDAATIEKLAKNKQKPLSNEVGEKLSKELKAVKYVECSALTQKGLKNVFDEAILAALEPPEPPRKRRCCLL 191 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEI+HHCQKTPFLLVGTQIDLRDDAATIEKLAKNKQKP++ E GEKL+KELKAVKYVECSALTQKGLKNVFDEAILAALEPPEP R+RRC +L Sbjct: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCQKTPFLLVGTQIDLRDDAATIEKLAKNKQKPITGEQGEKLAKELKAVKYVECSALTQKGLKNVFDEAILAALEPPEPVRRRRCSVL 191
BLAST of cdc42 homolog vs. nr
Match: gi|156541379|ref|XP_001600440.1| (PREDICTED: cdc42 homolog [Nasonia vitripennis]) HSP 1 Score: 377.096 bits (967), Expect = 4.113e-132 Identity = 181/191 (94.76%), Postives = 187/191 (97.91%), Query Frame = 0 Query: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEISHHCQKTPFLLVGTQIDLRDDAATIEKLAKNKQKPLSNEVGEKLSKELKAVKYVECSALTQKGLKNVFDEAILAALEPPEPPRKRRCCLL 191 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEI+HHCQKTPFLLVGTQIDLRDDAATIEKLAKNKQKP++ E GEKL+KELKAVKYVECSALTQKGLKNVFDEAILAALEPPEP R+RRC +L Sbjct: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCQKTPFLLVGTQIDLRDDAATIEKLAKNKQKPITGEQGEKLAKELKAVKYVECSALTQKGLKNVFDEAILAALEPPEPVRRRRCIVL 191
BLAST of cdc42 homolog vs. nr
Match: gi|954574822|ref|XP_014611758.1| (PREDICTED: cdc42 homolog [Polistes canadensis] >gi|954574824|ref|XP_014611759.1| PREDICTED: cdc42 homolog [Polistes canadensis] >gi|972212650|ref|XP_015188785.1| PREDICTED: cdc42 homolog [Polistes dominula] >gi|972212652|ref|XP_015188786.1| PREDICTED: cdc42 homolog [Polistes dominula] >gi|972212654|ref|XP_015188787.1| PREDICTED: cdc42 homolog [Polistes dominula] >gi|972212656|ref|XP_015188788.1| PREDICTED: cdc42 homolog [Polistes dominula]) HSP 1 Score: 377.096 bits (967), Expect = 4.250e-132 Identity = 181/191 (94.76%), Postives = 187/191 (97.91%), Query Frame = 0 Query: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEISHHCQKTPFLLVGTQIDLRDDAATIEKLAKNKQKPLSNEVGEKLSKELKAVKYVECSALTQKGLKNVFDEAILAALEPPEPPRKRRCCLL 191 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEI+HHCQKTPFLLVGTQIDLRDDAATIEKLAKNKQKP++ E GEKL+KELKAVKYVECSALTQKGLKNVFDEAILAALEPPEP R+RRC +L Sbjct: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCQKTPFLLVGTQIDLRDDAATIEKLAKNKQKPITGEQGEKLAKELKAVKYVECSALTQKGLKNVFDEAILAALEPPEPVRRRRCVVL 191
BLAST of cdc42 homolog vs. nr
Match: gi|225712114|gb|ACO11903.1| (Cdc42 homolog precursor [Lepeophtheirus salmonis] >gi|225713524|gb|ACO12608.1| Cdc42 homolog precursor [Lepeophtheirus salmonis] >gi|290462095|gb|ADD24095.1| Cdc42 homolog [Lepeophtheirus salmonis] >gi|290562471|gb|ADD38631.1| Cdc42 homolog [Lepeophtheirus salmonis]) HSP 1 Score: 377.096 bits (967), Expect = 4.796e-132 Identity = 180/191 (94.24%), Postives = 188/191 (98.43%), Query Frame = 0 Query: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEISHHCQKTPFLLVGTQIDLRDDAATIEKLAKNKQKPLSNEVGEKLSKELKAVKYVECSALTQKGLKNVFDEAILAALEPPEPPRKRRCCLL 191 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVC+SVVSPSS+ENV+EKWVPEISHHCQ+TPFLLVGTQIDLRD+AATIEKL KNKQKPLS EVGEKL+KELKAV+YVECSALTQKGLKNVFDEAILAALEPPEPP+KRRC LL Sbjct: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCYSVVSPSSYENVREKWVPEISHHCQRTPFLLVGTQIDLRDEAATIEKLTKNKQKPLSMEVGEKLAKELKAVRYVECSALTQKGLKNVFDEAILAALEPPEPPKKRRCHLL 191 The following BLAST results are available for this feature:
BLAST of cdc42 homolog vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 25
Pagesback to top
BLAST of cdc42 homolog vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
Pagesback to top
BLAST of cdc42 homolog vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold627_size122700:26477..27638+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold627_size122700-snap-gene-0.30 ID=maker-scaffold627_size122700-snap-gene-0.30|Name=cdc42 homolog|organism=Tigriopus kingsejongensis|type=gene|length=1162bp|location=Sequence derived from alignment at scaffold627_size122700:26477..27638+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'cdc42 homolog' has the following synonyms
Add to Basket
|