60s ribosomal protein l24, maker-scaffold631_size122145-snap-gene-0.34 (gene) Tigriopus kingsejongensis

Overview
Name60s ribosomal protein l24
Unique Namemaker-scaffold631_size122145-snap-gene-0.34
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of 60s ribosomal protein l24 vs. L. salmonis genes
Match: EMLSAG00000003171 (supercontig:LSalAtl2s:LSalAtl2s176:340392:341735:-1 gene:EMLSAG00000003171 transcript:EMLSAT00000003171 description:"augustus_masked-LSalAtl2s176-processed-gene-3.0")

HSP 1 Score: 238.81 bits (608), Expect = 2.383e-82
Identity = 126/162 (77.78%), Postives = 141/162 (87.04%), Query Frame = 0 
Query:    1 MRIDLCAYSGYKVYPGRGRTLVRPDGKVFKFLDNRCHKAHLLRRNPRKVTWTVLYRRKHKKGIEEETAKKRTKRTQKFQRAVVGATLQDILAKRNQKPEVRKAQREQAIRAAKDAKKSSRSTTKKPASAAAPAKAKAAKPAQKT---SKPMQKAAPRVGGKR 159
            M+IDLC+YSGYK+YP RGRTLVRPDGKVFKFL  R HKAHLL+RNPRKVTWTVLYRRKHKKGIEEET+KKRTKRTQ+FQRAVVGATLQDILAKRNQKPEVRKAQREQAIRAAKD+KK++++      S    A+A  AKP+ KT   SKP+ K+APRVGGKR
Sbjct:    1 MKIDLCSYSGYKIYPCRGRTLVRPDGKVFKFLXGRSHKAHLLKRNPRKVTWTVLYRRKHKKGIEEETSKKRTKRTQRFQRAVVGATLQDILAKRNQKPEVRKAQREQAIRAAKDSKKATKA------SKKPQAQATKAKPSTKTSGKSKPVAKSAPRVGGKR 156
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BLAST of 60s ribosomal protein l24 vs. SwissProt
Match: gi|52783234|sp|Q92354.1|RL24A_SCHPO (RecName: Full=60S ribosomal protein L24-A)

HSP 1 Score: 136.732 bits (343), Expect = 1.014e-40
Identity = 68/121 (56.20%), Postives = 88/121 (72.73%), Query Frame = 0 
Query:    1 MRIDLCAYSGYKVYPGRGRTLVRPDGKVFKFLDNRCHKAHLLRRNPRKVTWTVLYRRKHKKGIEEETAKKRTKRTQKFQRAVVGATLQDILAKRNQKPEVRKAQREQAIRAAKDAKKSSRS 121
            M++++C++SG KVYPG GR  VR D KVF+F++ +     L R+NPR+++WTVLYRR HKKGI EE AKKRT+RT K QR +VGA L  I  KRNQ+PEVR A R  A++  KD K +S S
Sbjct:    1 MKVEVCSFSGSKVYPGAGRLFVRGDNKVFRFVNKKSESLFLQRKNPRRLSWTVLYRRMHKKGISEEHAKKRTRRTVKHQRGIVGANLDVIKEKRNQRPEVRAAARAAALKQRKDKKAASES 121
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BLAST of 60s ribosomal protein l24 vs. SwissProt
Match: gi|52783219|sp|O74884.1|RL24B_SCHPO (RecName: Full=60S ribosomal protein L24-B)

HSP 1 Score: 135.576 bits (340), Expect = 2.950e-40
Identity = 67/121 (55.37%), Postives = 88/121 (72.73%), Query Frame = 0 
Query:    1 MRIDLCAYSGYKVYPGRGRTLVRPDGKVFKFLDNRCHKAHLLRRNPRKVTWTVLYRRKHKKGIEEETAKKRTKRTQKFQRAVVGATLQDILAKRNQKPEVRKAQREQAIRAAKDAKKSSRS 121
            M++++C++SG KVYPG GR  VR D KVF+F++ +     L R+NPR+++WTVLYRR HKKGI EE AKKRT+RT K QR +VGA L  I  KRNQ+PEVR A R  A++  KD + +S S
Sbjct:    1 MKVEVCSFSGSKVYPGAGRLFVRGDNKVFRFVNKKSESLFLQRKNPRRLSWTVLYRRMHKKGISEEHAKKRTRRTVKHQRGIVGANLDVIKEKRNQRPEVRAAARAAALKQRKDKRAASES 121
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BLAST of 60s ribosomal protein l24 vs. SwissProt
Match: gi|53600117|sp|O01868.1|RL24_CAEEL (RecName: Full=60S ribosomal protein L24)

HSP 1 Score: 135.191 bits (339), Expect = 5.391e-40
Identity = 79/162 (48.77%), Postives = 105/162 (64.81%), Query Frame = 0 
Query:    1 MRIDLCAYSGYKVYPGRGRTLVRPDGKVFKFLDNRCHKAHLLRRNPRKVTWTVLYRRKHKKGI--EEETAKKRTKRT-QKFQRAVVGATLQDILAKRNQKPEVRKAQREQAIRAAKDAKKSSRSTTKKPASAAAPAKAKAAKPAQKTSKPMQKAAPRVGGKR 159
            M+++ C YSGYK++PG G+ LVR DGKV  FL  +  K   LRRNPR + WTVLYR K+KKG   +E+  +K+TK++ Q   RAV G +L  ILAKRNQ  + R+ QREQA + AKDA K+ R+           ++ K     QKT+K ++ AAPRVGGKR
Sbjct:    1 MKVETCVYSGYKIHPGHGKRLVRTDGKVQIFLSGKALKGAKLRRNPRDIRWTVLYRIKNKKGTHGQEQVTRKKTKKSVQVVNRAVAGLSLDAILAKRNQTEDFRRQQREQAAKIAKDANKAVRAAKAAANKEKKASQPKT---QQKTAKNVKTAAPRVGGKR 159
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BLAST of 60s ribosomal protein l24 vs. SwissProt
Match: gi|730554|sp|P38665.1|RL24_KLULA (RecName: Full=60S ribosomal protein L24; AltName: Full=Ribosomal protein L30)

HSP 1 Score: 125.946 bits (315), Expect = 2.093e-36
Identity = 57/105 (54.29%), Postives = 79/105 (75.24%), Query Frame = 0 
Query:    1 MRIDLCAYSGYKVYPGRGRTLVRPDGKVFKFLDNRCHKAHLLRRNPRKVTWTVLYRRKHKKGIEEETAKKRTKRTQKFQRAVVGATLQDILAKRNQKPEVRKAQR 105
            M++++ ++SG K+YPGRG   VR D K+F+F  ++       R+NPR++ WTVLYRR HKKGI EE A+KRT+++ K QRAVVGA+L+ I  +R+ KPEVRKAQR
Sbjct:    1 MKVEIDSFSGAKIYPGRGTLFVRGDSKIFRFQSSKSASLFHQRKNPRRIAWTVLYRRHHKKGITEEVARKRTRKSVKAQRAVVGASLELIKERRSLKPEVRKAQR 105
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BLAST of 60s ribosomal protein l24 vs. SwissProt
Match: gi|52783246|sp|Q6BNC2.1|RL24_DEBHA (RecName: Full=60S ribosomal protein L24)

HSP 1 Score: 124.79 bits (312), Expect = 5.672e-36
Identity = 56/106 (52.83%), Postives = 81/106 (76.42%), Query Frame = 0 
Query:    1 MRIDLCAYSGYKVYPGRGRTLVRPDGKVFKFLDNRCHKAHLLRRNPRKVTWTVLYRRKHKKGIEEETAKKRTKRTQKFQRAVVGATLQDILAKRNQKPEVRKAQRE 106
            M+++L ++SG K+YPGRG   VR D K+F+F  ++       R+NPR+++WTVLYRR+HKKGI EE+AK+RT++T K QRA+VGA+L+ I  +R+QKP  RKA R+
Sbjct:    1 MKVELDSFSGTKIYPGRGTLFVRGDSKIFRFQSSKSASLFHQRKNPRRISWTVLYRRQHKKGISEESAKRRTRKTVKNQRAIVGASLELIKERRSQKPSDRKAARD 106
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BLAST of 60s ribosomal protein l24 vs. SwissProt
Match: gi|52783250|sp|Q6FXY9.1|RL24_CANGA (RecName: Full=60S ribosomal protein L24)

HSP 1 Score: 124.79 bits (312), Expect = 6.557e-36
Identity = 57/105 (54.29%), Postives = 80/105 (76.19%), Query Frame = 0 
Query:    1 MRIDLCAYSGYKVYPGRGRTLVRPDGKVFKFLDNRCHKAHLLRRNPRKVTWTVLYRRKHKKGIEEETAKKRTKRTQKFQRAVVGATLQDILAKRNQKPEVRKAQR 105
            M++++ ++SG K+YPGRG   VR D K+F+F +++       R+NPR+V WTVLYRR HKKGI EE AKKR+++T K QRA+VGA+L+ I  +R+ KPEVRKA+R
Sbjct:    1 MKVEIDSFSGAKIYPGRGTLFVRGDSKIFRFQNSKSASLFKQRKNPRRVAWTVLYRRHHKKGITEEVAKKRSRKTVKAQRAIVGASLELIKERRSLKPEVRKAKR 105
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BLAST of 60s ribosomal protein l24 vs. SwissProt
Match: gi|52783254|sp|Q752U6.1|RL24_ASHGO (RecName: Full=60S ribosomal protein L24)

HSP 1 Score: 124.405 bits (311), Expect = 9.700e-36
Identity = 57/105 (54.29%), Postives = 79/105 (75.24%), Query Frame = 0 
Query:    1 MRIDLCAYSGYKVYPGRGRTLVRPDGKVFKFLDNRCHKAHLLRRNPRKVTWTVLYRRKHKKGIEEETAKKRTKRTQKFQRAVVGATLQDILAKRNQKPEVRKAQR 105
            M++++ ++SG K+YPGRG   VR D KVF+F  ++       R+NPR++ WTVLYRR HKKGI EE AKKR+++T K QRAVVGA+L+ I  +R+ KPE+RKA+R
Sbjct:    1 MKVEIDSFSGAKIYPGRGTLFVRGDSKVFRFHSSKSASLFHQRKNPRRIAWTVLYRRHHKKGITEEVAKKRSRKTVKAQRAVVGASLELIKERRSLKPEIRKAKR 105
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BLAST of 60s ribosomal protein l24 vs. SwissProt
Match: gi|52783256|sp|Q7SDU2.1|RL24_NEUCR (RecName: Full=60S ribosomal protein L24)

HSP 1 Score: 122.865 bits (307), Expect = 3.641e-35
Identity = 58/119 (48.74%), Postives = 83/119 (69.75%), Query Frame = 0 
Query:    1 MRIDLCAYSGYKVYPGRGRTLVRPDGKVFKFLDNRCHKAHLLRRNPRKVTWTVLYRRKHKKGIEEETAKKRTKRTQKFQRAVVGATLQDILAKRNQKPEVRKAQREQAIRAAKDAKKSS 119
            MR     +SG ++YPG+G+  VR D K+F+F + +     L R+NPR++ WTVLYRR+HKKGI EE AKKR++RT K QRA+VGA+L+ I  +R+ +PE R A R  AI+ +K  K+ +
Sbjct:    1 MRTYDDTFSGQRIYPGKGKLYVRGDSKIFRFQNGKSESLFLQRKNPRRIAWTVLYRRQHKKGISEEVAKKRSRRTVKAQRAIVGASLEVIKERRSMRPEARSAARLAAIKESKAKKQET 119
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BLAST of 60s ribosomal protein l24 vs. SwissProt
Match: gi|132946|sp|P24000.1|RL24B_YEAST (RecName: Full=60S ribosomal protein L24-B; AltName: Full=L30; AltName: Full=Large ribosomal subunit protein eL24-B; AltName: Full=RP29; AltName: Full=YL21)

HSP 1 Score: 120.939 bits (302), Expect = 1.807e-34
Identity = 54/111 (48.65%), Postives = 81/111 (72.97%), Query Frame = 0 
Query:    1 MRIDLCAYSGYKVYPGRGRTLVRPDGKVFKFLDNRCHKAHLLRRNPRKVTWTVLYRRKHKKGIEEETAKKRTKRTQKFQRAVVGATLQDILAKRNQKPEVRKAQREQAIRA 111
            M++++ ++SG K+YPGRG   VR D K+F+F +++       R+NPR++ WTVL+R+ HKKGI EE AKKR+++T K QR + GA+L  I  +R+ KPEVRKA RE+ ++A
Sbjct:    1 MKVEVDSFSGAKIYPGRGTLFVRGDSKIFRFQNSKSASLFKQRKNPRRIAWTVLFRKHHKKGITEEVAKKRSRKTVKAQRPITGASLDLIKERRSLKPEVRKANREEKLKA 111
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BLAST of 60s ribosomal protein l24 vs. SwissProt
Match: gi|52783247|sp|Q6C4U6.1|RL24_YARLI (RecName: Full=60S ribosomal protein L24)

HSP 1 Score: 118.627 bits (296), Expect = 1.640e-33
Identity = 54/105 (51.43%), Postives = 74/105 (70.48%), Query Frame = 0 
Query:    1 MRIDLCAYSGYKVYPGRGRTLVRPDGKVFKFLDNRCHKAHLLRRNPRKVTWTVLYRRKHKKGIEEETAKKRTKRTQKFQRAVVGATLQDILAKRNQKPEVRKAQR 105
            M+I+L ++SG K+YPGRG   VR D K+F+F  ++       R+NPR++ WTVLYRRKHKKGI EE +KKR++++ K  R +VGA+L  I  KRN +PE R A R
Sbjct:    1 MKIELDSFSGNKIYPGRGTLFVRGDSKIFRFYSSKTASLFKQRKNPRRIAWTVLYRRKHKKGITEEVSKKRSRKSVKAVRGIVGASLDVIKEKRNARPETRNATR 105
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BLAST of 60s ribosomal protein l24 vs. nr
Match: gi|290462261|gb|ADD24178.1| (60S ribosomal protein L24 [Lepeophtheirus salmonis] >gi|290561781|gb|ADD38288.1| 60S ribosomal protein L24 [Lepeophtheirus salmonis])

HSP 1 Score: 241.891 bits (616), Expect = 1.424e-79
Identity = 127/162 (78.40%), Postives = 142/162 (87.65%), Query Frame = 0 
Query:    1 MRIDLCAYSGYKVYPGRGRTLVRPDGKVFKFLDNRCHKAHLLRRNPRKVTWTVLYRRKHKKGIEEETAKKRTKRTQKFQRAVVGATLQDILAKRNQKPEVRKAQREQAIRAAKDAKKSSRSTTKKPASAAAPAKAKAAKPAQKT---SKPMQKAAPRVGGKR 159
            M+IDLC+YSGYK+YP RGRTLVRPDGKVFKFLD R HKAHLL+RNPRKVTWTVLYRRKHKKGIEEET+KKRTKRTQ+FQRAVVGATLQDILAKRNQKPEVRKAQREQAIRAAKD+KK++++      S    A+A  AKP+ KT   SKP+ K+APRVGGKR
Sbjct:    1 MKIDLCSYSGYKIYPCRGRTLVRPDGKVFKFLDGRSHKAHLLKRNPRKVTWTVLYRRKHKKGIEEETSKKRTKRTQRFQRAVVGATLQDILAKRNQKPEVRKAQREQAIRAAKDSKKATKA------SKKPQAQATKAKPSTKTSGKSKPVAKSAPRVGGKR 156
[Close]
BLAST of 60s ribosomal protein l24 vs. nr
Match: gi|225713078|gb|ACO12385.1| (60S ribosomal protein L24 [Lepeophtheirus salmonis])

HSP 1 Score: 241.506 bits (615), Expect = 1.679e-79
Identity = 127/162 (78.40%), Postives = 141/162 (87.04%), Query Frame = 0 
Query:    1 MRIDLCAYSGYKVYPGRGRTLVRPDGKVFKFLDNRCHKAHLLRRNPRKVTWTVLYRRKHKKGIEEETAKKRTKRTQKFQRAVVGATLQDILAKRNQKPEVRKAQREQAIRAAKDAKKSSRSTTKKPASAAAPAKAKAAKPAQKT---SKPMQKAAPRVGGKR 159
            M IDLC+YSGYK+YP RGRTLVRPDGKVFKFLD R HKAHLL+RNPRKVTWTVLYRRKHKKGIEEET+KKRTKRTQ+FQRAVVGATLQDILAKRNQKPEVRKAQREQAIRAAKD+KK++++      S    A+A  AKP+ KT   SKP+ K+APRVGGKR
Sbjct:    1 MEIDLCSYSGYKIYPCRGRTLVRPDGKVFKFLDGRSHKAHLLKRNPRKVTWTVLYRRKHKKGIEEETSKKRTKRTQRFQRAVVGATLQDILAKRNQKPEVRKAQREQAIRAAKDSKKATKA------SKKPQAQATKAKPSTKTSGESKPVAKSAPRVGGKR 156
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BLAST of 60s ribosomal protein l24 vs. nr
Match: gi|1130218696|ref|XP_019756741.1| (PREDICTED: 60S ribosomal protein L24-like [Dendroctonus ponderosae] >gi|332376465|gb|AEE63372.1| unknown [Dendroctonus ponderosae] >gi|546675269|gb|ERL86505.1| hypothetical protein D910_03909 [Dendroctonus ponderosae])

HSP 1 Score: 229.95 bits (585), Expect = 6.241e-75
Identity = 117/162 (72.22%), Postives = 139/162 (85.80%), Query Frame = 0 
Query:    1 MRIDLCAYSGYKVYPGRGRTLVRPDGKVFKFLDNRCHKAHLLRRNPRKVTWTVLYRRKHKKGIEEETAKKRTKRTQKFQRAVVGATLQDILAKRNQKPEVRKAQREQAIRAAKDAKKSSRSTTKKPASAAAPAKAKAA--KPAQ-KTSKPMQKAAPRVGGKR 159
            M+I LCAYSGYK YPG G+TLV+ DGK F FL+++C +AHL+RRNPRKVTWTVLYRRKHKKG EEETAKKRT++TQKFQRA+VGA+L DI+AKRNQ+PE+R+AQREQAIRAAK+AKKS+R+  K    AA P KAK+A  K AQ K +K +QKAAPRVGGKR
Sbjct:    1 MKIGLCAYSGYKTYPGHGKTLVKVDGKNFTFLNSKCERAHLMRRNPRKVTWTVLYRRKHKKGQEEETAKKRTRKTQKFQRAIVGASLNDIIAKRNQRPEIREAQREQAIRAAKEAKKSTRTAKK----AAQPTKAKSATTKVAQKKVAKVVQKAAPRVGGKR 158
[Close]
BLAST of 60s ribosomal protein l24 vs. nr
Match: gi|1130196949|ref|XP_019754094.1| (PREDICTED: 60S ribosomal protein L24-like [Dendroctonus ponderosae] >gi|1130198533|ref|XP_019759701.1| PREDICTED: 60S ribosomal protein L24-like [Dendroctonus ponderosae] >gi|478269562|gb|ENN83356.1| hypothetical protein YQE_00285, partial [Dendroctonus ponderosae])

HSP 1 Score: 229.18 bits (583), Expect = 1.373e-74
Identity = 114/161 (70.81%), Postives = 137/161 (85.09%), Query Frame = 0 
Query:    1 MRIDLCAYSGYKVYPGRGRTLVRPDGKVFKFLDNRCHKAHLLRRNPRKVTWTVLYRRKHKKGIEEETAKKRTKRTQKFQRAVVGATLQDILAKRNQKPEVRKAQREQAIRAAKDAKKSSRSTTKKPASAAAPAKAKAA--KPAQKTSKPMQKAAPRVGGKR 159
            M+I LCAYSGYK YPG G+TLV+ DGK F FL+++C +AHL+RRNPRKVTWTVLYRRKHKKG EEET KKRT++TQKFQRA+VGA+L DI+AKRNQ+PE+R+AQREQAIRAAK+AKKS+R+  K    AA P KAK+A  K  +K +K +QKAAPRVGGKR
Sbjct:    1 MKIGLCAYSGYKTYPGHGKTLVKVDGKNFTFLNSKCERAHLMRRNPRKVTWTVLYRRKHKKGQEEETTKKRTRKTQKFQRAIVGASLNDIIAKRNQRPEIREAQREQAIRAAKEAKKSTRTAKK----AAQPIKAKSATTKAQKKVAKVVQKAAPRVGGKR 157
[Close]
BLAST of 60s ribosomal protein l24 vs. nr
Match: gi|478267657|gb|ENN83078.1| (hypothetical protein YQE_00560, partial [Dendroctonus ponderosae])

HSP 1 Score: 227.254 bits (578), Expect = 1.378e-73
Identity = 114/161 (70.81%), Postives = 137/161 (85.09%), Query Frame = 0 
Query:    1 MRIDLCAYSGYKVYPGRGRTLVRPDGKVFKFLDNRCHKAHLLRRNPRKVTWTVLYRRKHKKGIEEETAKKRTKRTQKFQRAVVGATLQDILAKRNQKPEVRKAQREQAIRAAKDAKKSSRSTTKKPASAAAPAKAKAA--KPAQKTSKPMQKAAPRVGGKR 159
            M+I LCAYSGYK YPG G+TLV+ DGK F FL+++C +AHL+RRNPRKVTWTVLYRRKHKKG EEET KKRT++TQKFQRA+VGA+L DI+AKRNQ+PE+R+AQREQAIRAAK+AKKS+R+  K    AA P KAK+A  K  +K +K +QKAAPRVGGKR
Sbjct:    1 MKIGLCAYSGYKTYPGHGKTLVKVDGKNFTFLNSKCERAHLMRRNPRKVTWTVLYRRKHKKGQEEETTKKRTRKTQKFQRAIVGASLNDIIAKRNQRPEIREAQREQAIRAAKEAKKSTRTAKK----AAQPIKAKSATTKAQKKVAKVVQKAAPRVGGKR 157
[Close]
BLAST of 60s ribosomal protein l24 vs. nr
Match: gi|242010172|ref|XP_002425850.1| (60S ribosomal protein L24, putative [Pediculus humanus corporis] >gi|212509783|gb|EEB13112.1| 60S ribosomal protein L24, putative [Pediculus humanus corporis])

HSP 1 Score: 224.942 bits (572), Expect = 6.491e-73
Identity = 114/159 (71.70%), Postives = 133/159 (83.65%), Query Frame = 0 
Query:    1 MRIDLCAYSGYKVYPGRGRTLVRPDGKVFKFLDNRCHKAHLLRRNPRKVTWTVLYRRKHKKGIEEETAKKRTKRTQKFQRAVVGATLQDILAKRNQKPEVRKAQREQAIRAAKDAKKSSRSTTKKPASAAAPAKAKAAKPAQKTSKPMQKAAPRVGGKR 159
            M+I LC+YSGYK+YPG G+T+V+ DGKVF FL+ +C  AHLLRRNPRKVTWTVLYRRKHKKG EEE  K+RT+RTQKFQRA+VGA+L +ILAKRN KPEVRKAQREQAIRAAK+ KK+ ++ TKKP    APAK K A P QK  K +QK+APRVGGKR
Sbjct:    1 MKIGLCSYSGYKIYPGHGKTMVKADGKVFTFLNKKCESAHLLRRNPRKVTWTVLYRRKHKKGQEEEQTKRRTRRTQKFQRAIVGASLTEILAKRNMKPEVRKAQREQAIRAAKEQKKAIKA-TKKP----APAKTKTA-PKQKAIKVLQKSAPRVGGKR 153
[Close]
BLAST of 60s ribosomal protein l24 vs. nr
Match: gi|478259186|gb|ENN79097.1| (hypothetical protein YQE_04450, partial [Dendroctonus ponderosae])

HSP 1 Score: 226.098 bits (575), Expect = 1.843e-72
Identity = 116/161 (72.05%), Postives = 138/161 (85.71%), Query Frame = 0 
Query:    2 RIDLCAYSGYKVYPGRGRTLVRPDGKVFKFLDNRCHKAHLLRRNPRKVTWTVLYRRKHKKGIEEETAKKRTKRTQKFQRAVVGATLQDILAKRNQKPEVRKAQREQAIRAAKDAKKSSRSTTKKPASAAAPAKAKAA--KPAQ-KTSKPMQKAAPRVGGKR 159
            +I LCAYSGYK YPG G+TLV+ DGK F FL+++C +AHL+RRNPRKVTWTVLYRRKHKKG EEETAKKRT++TQKFQRA+VGA+L DI+AKRNQ+PE+R+AQREQAIRAAK+AKKS+R+  K    AA P KAK+A  K AQ K +K +QKAAPRVGGKR
Sbjct:   57 KIGLCAYSGYKTYPGHGKTLVKVDGKNFTFLNSKCERAHLMRRNPRKVTWTVLYRRKHKKGQEEETAKKRTRKTQKFQRAIVGASLNDIIAKRNQRPEIREAQREQAIRAAKEAKKSTRTAKK----AAQPTKAKSATTKVAQKKVAKVVQKAAPRVGGKR 213
[Close]
BLAST of 60s ribosomal protein l24 vs. nr
Match: gi|1069799262|ref|XP_018324246.1| (PREDICTED: 60S ribosomal protein L24 [Agrilus planipennis])

HSP 1 Score: 223.402 bits (568), Expect = 2.669e-72
Identity = 111/159 (69.81%), Postives = 133/159 (83.65%), Query Frame = 0 
Query:    1 MRIDLCAYSGYKVYPGRGRTLVRPDGKVFKFLDNRCHKAHLLRRNPRKVTWTVLYRRKHKKGIEEETAKKRTKRTQKFQRAVVGATLQDILAKRNQKPEVRKAQREQAIRAAKDAKKSSRSTTKKPASAAAPAKAKAAKPAQKTSKPMQKAAPRVGGKR 159
            M+I LC YSGYK+YPG G+T+V+ DGK F FL+++C  AHL++RNPRKVTWTVLYRRKHKKG EEETAKKRT+RTQKFQRA+VGA+L DILAKRNQ+PEVRKAQR+QAIRAAK+AKKS+++  K    AAAP K K  +   K +K  QK+APRVGGKR
Sbjct:    1 MKIGLCVYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMKRNPRKVTWTVLYRRKHKKGQEEETAKKRTRRTQKFQRAIVGASLNDILAKRNQRPEVRKAQRDQAIRAAKEAKKSTKAQKK----AAAPGKPKLVQKT-KAAKVTQKSAPRVGGKR 154
[Close]
BLAST of 60s ribosomal protein l24 vs. nr
Match: gi|70909781|emb|CAJ17316.1| (ribosomal protein L24e [Hister sp. APV-2005])

HSP 1 Score: 221.476 bits (563), Expect = 1.351e-71
Identity = 112/161 (69.57%), Postives = 134/161 (83.23%), Query Frame = 0 
Query:    1 MRIDLCAYSGYKVYPGRGRTLVRPDGKVFKFLDNRCHKAHLLRRNPRKVTWTVLYRRKHKKGIEEETAKKRTKRTQKFQRAVVGATLQDILAKRNQKPEVRKAQREQAIRAAKDAKKSSRSTTKKPASAAAPAKAKAAKPAQKT--SKPMQKAAPRVGGKR 159
            M+I LCAYSGYK+YPG G+T+V+ DGK F FL+++C  AHL++RNPRKVTWTVLYRRKHKKG  EE +K+RT+RTQKFQRA+VGA+L DILAKRNQ+PEVRKAQREQAIRAAK+ KKS+++  K    AA PAK    KP QKT  +K +QKAAPRVGGKR
Sbjct:    1 MKIGLCAYSGYKIYPGHGKTMVKVDGKQFTFLNSKCEHAHLMKRNPRKVTWTVLYRRKHKKGQGEEASKRRTRRTQKFQRAIVGASLNDILAKRNQRPEVRKAQREQAIRAAKEQKKSTKTVKK----AAQPAK---QKPVQKTKAAKNIQKAAPRVGGKR 154
[Close]
BLAST of 60s ribosomal protein l24 vs. nr
Match: gi|70909779|emb|CAJ17315.1| (ribosomal protein L24e [Biphyllus lunatus])

HSP 1 Score: 219.55 bits (558), Expect = 8.895e-71
Identity = 109/159 (68.55%), Postives = 134/159 (84.28%), Query Frame = 0 
Query:    1 MRIDLCAYSGYKVYPGRGRTLVRPDGKVFKFLDNRCHKAHLLRRNPRKVTWTVLYRRKHKKGIEEETAKKRTKRTQKFQRAVVGATLQDILAKRNQKPEVRKAQREQAIRAAKDAKKSSRSTTKKPASAAAPAKAKAAKPAQKTSKPMQKAAPRVGGKR 159
            M+I LCAYSGYK+YPG G+T+V+ DGK F FL+++C +AHL++RNPRKVTWTVLYRRKHKKG EEE  KKRT+RTQKFQR++VGA+L DILAKRNQ+PEVRKAQREQAIRAAK+ KK++++       +  PAKAK A P QK +K +QKAAPR+GGKR
Sbjct:    1 MKIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCERAHLMKRNPRKVTWTVLYRRKHKKGQEEEATKKRTRRTQKFQRSIVGASLNDILAKRNQRPEVRKAQREQAIRAAKEQKKTTKAA----KKSTQPAKAKLA-PKQKATKNVQKAAPRIGGKR 154
The following BLAST results are available for this feature:
BLAST of 60s ribosomal protein l24 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAG000000031712.383e-8277.78supercontig:LSalAtl2s:LSalAtl2s176:340392:341735:-... [more]
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BLAST of 60s ribosomal protein l24 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
gi|52783234|sp|Q92354.1|RL24A_SCHPO1.014e-4056.20RecName: Full=60S ribosomal protein L24-A[more]
gi|52783219|sp|O74884.1|RL24B_SCHPO2.950e-4055.37RecName: Full=60S ribosomal protein L24-B[more]
gi|53600117|sp|O01868.1|RL24_CAEEL5.391e-4048.77RecName: Full=60S ribosomal protein L24[more]
gi|730554|sp|P38665.1|RL24_KLULA2.093e-3654.29RecName: Full=60S ribosomal protein L24; AltName: ... [more]
gi|52783246|sp|Q6BNC2.1|RL24_DEBHA5.672e-3652.83RecName: Full=60S ribosomal protein L24[more]
gi|52783250|sp|Q6FXY9.1|RL24_CANGA6.557e-3654.29RecName: Full=60S ribosomal protein L24[more]
gi|52783254|sp|Q752U6.1|RL24_ASHGO9.700e-3654.29RecName: Full=60S ribosomal protein L24[more]
gi|52783256|sp|Q7SDU2.1|RL24_NEUCR3.641e-3548.74RecName: Full=60S ribosomal protein L24[more]
gi|132946|sp|P24000.1|RL24B_YEAST1.807e-3448.65RecName: Full=60S ribosomal protein L24-B; AltName... [more]
gi|52783247|sp|Q6C4U6.1|RL24_YARLI1.640e-3351.43RecName: Full=60S ribosomal protein L24[more]

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BLAST of 60s ribosomal protein l24 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|290462261|gb|ADD24178.1|1.424e-7978.4060S ribosomal protein L24 [Lepeophtheirus salmonis... [more]
gi|225713078|gb|ACO12385.1|1.679e-7978.4060S ribosomal protein L24 [Lepeophtheirus salmonis... [more]
gi|1130218696|ref|XP_019756741.1|6.241e-7572.22PREDICTED: 60S ribosomal protein L24-like [Dendroc... [more]
gi|1130196949|ref|XP_019754094.1|1.373e-7470.81PREDICTED: 60S ribosomal protein L24-like [Dendroc... [more]
gi|478267657|gb|ENN83078.1|1.378e-7370.81hypothetical protein YQE_00560, partial [Dendrocto... [more]
gi|242010172|ref|XP_002425850.1|6.491e-7371.7060S ribosomal protein L24, putative [Pediculus hum... [more]
gi|478259186|gb|ENN79097.1|1.843e-7272.05hypothetical protein YQE_04450, partial [Dendrocto... [more]
gi|1069799262|ref|XP_018324246.1|2.669e-7269.81PREDICTED: 60S ribosomal protein L24 [Agrilus plan... [more]
gi|70909781|emb|CAJ17316.1|1.351e-7169.57ribosomal protein L24e [Hister sp. APV-2005][more]
gi|70909779|emb|CAJ17315.1|8.895e-7168.55ribosomal protein L24e [Biphyllus lunatus][more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold631_size122145supercontigscaffold631_size122145:39076..39956 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
NoteC:ribosome
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold631_size122145-snap-gene-0.34-mRNA-1maker-scaffold631_size122145-snap-gene-0.34-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold631_size122145:39076..39956+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold631_size122145-snap-gene-0.34 ID=maker-scaffold631_size122145-snap-gene-0.34|Name=60s ribosomal protein l24|organism=Tigriopus kingsejongensis|type=gene|length=881bp|location=Sequence derived from alignment at scaffold631_size122145:39076..39956+ (Tigriopus kingsejongensis)
ATTGGAATAGCTCGTCAAGCTTGCGCTCGCTAAGCCAATGTTTGGGAAGA
ATTTGCTGTTCCCTCTCTTTCCGGTTTAGCTGACCTATCAGGATGAGGTA
AATATCTGGGAAATGGTGGAAAATCGGGAAAAATCGGGGTGGGGAGTGAT
GGTGGGACGGTGAAATCGAAGCCACACGCCCCCTGGTCCCCTCAACTGCC
CAGGGCGACGTGATTGGCTCCCGTGGGCGGGTTCGAAGGCCTTCCCCGGC
CCAACTTGGAAGTTCCCTGACATCTCTTGAGCACCCGTGACTCTTTTCAG
GATCGATTTGTGTGCCTACAGTGGGTACAAGGTCTACCCCGGCCGTGGCC
GCACTCTGGTGCGTCCCGACGGCAAAGTGTTCAAGTTCTTGGACAACCGT
TGCCACAAGGCTCATCTCTTGAGGCGCAATCCCCGCAAGGTCACCTGGAC
CGTGCTCTACCGCCGAAAGCACAAGAAGGGCATCGAGGAGGAGACCGCCA
AGAAGCGCACCAAGCGAACCCAGAAGTTCCAGCGGGCCGTGGTGGGCGCC
ACACTCCAGGATATCCTGGCCAAGCGCAACCAAAAGCCCGAGGTCAGGAA
GGCTCAGCGTGAACAGGCCATCAGGTGAGTGAGCGGCTCCTTCCGCCGGC
CTCCAGAGCCCGAGTTTGACGTCCACGTGTGTTCTTTCTAGGGCCGCCAA
GGATGCTAAGAAGTCGTCGCGATCTACCACGAAGAAGCCCGCCTCGGCTG
CCGCTCCGGCTAAGGCCAAGGCCGCCAAGCCAGCTCAGAAGACATCCAAG
CCCATGCAGAAGGCCGCTCCCCGCGTGGGAGGCAAGCGATAAGGATCGTT
CTGGCCCAGATTCCTCTTAACATCGGGAAAT
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Synonyms
The feature '60s ribosomal protein l24' has the following synonyms
Synonym
Tk01055
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