unknown, maker-scaffold646_size120253-snap-gene-0.15 (gene) Tigriopus kingsejongensis

Overview
Nameunknown
Unique Namemaker-scaffold646_size120253-snap-gene-0.15
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of unknown vs. L. salmonis genes
Match: EMLSAG00000005046 (supercontig:LSalAtl2s:LSalAtl2s263:270736:278594:1 gene:EMLSAG00000005046 transcript:EMLSAT00000005046 description:"augustus_masked-LSalAtl2s263-processed-gene-2.4")

HSP 1 Score: 48.521 bits (114), Expect = 3.198e-7
Identity = 24/66 (36.36%), Postives = 44/66 (66.67%), Query Frame = 0 
Query:    7 ELTSRME-MEPDKIPPEVFMRRKDLLDQVQKVIDIVEPGLTRRRGISLFESSICHLQLG-RLLHKA 70
            ++  RME  EPD +  + FMR+K+L ++V KV++++ PG TR++G+ ++E  +  + +G R L K 
Sbjct:  403 KMYGRMEGYEPDSLSDDQFMRKKELCERVLKVLNVITPGQTRKKGMMMYELHLPFVIMGNRALQKG 468
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BLAST of unknown vs. nr
Match: gi|1325310795|ref|XP_023337013.1| (uncharacterized protein LOC111708015 [Eurytemora affinis])

HSP 1 Score: 83.9593 bits (206), Expect = 3.081e-17
Identity = 47/130 (36.15%), Postives = 72/130 (55.38%), Query Frame = 0 
Query:    1 MNTAYMELTSRMEMEPDKIPPEVFMRRKDLLDQVQKVIDIVEPGLTRRRGISLFESSICHLQLGRLLHKADRFSAEDFEELLETEIASLQEALKCLEHHPEGTLEAATRYKCEAALYEAEYTKKSLTSKV 130
            +N+A+++L +R    P++   E+ MRRK+ LD++ + I+IVEPGLT+RRG+SLFE +ICHLQ                     + I +L + L+CLEH   G+      +K  AA  +AE     L S +
Sbjct:   27 LNSAFLKLGAR---NPNEAELELLMRRKEFLDEIHQFIEIVEPGLTQRRGLSLFERAICHLQ---------------------SVIGNLDDCLECLEHFSVGSYMDDVNFKAGAARDDAELWLDELRSGL 132
The following BLAST results are available for this feature:
BLAST of unknown vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAG000000050463.198e-736.36supercontig:LSalAtl2s:LSalAtl2s263:270736:278594:1... [more]
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BLAST of unknown vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of unknown vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 1
Match NameE-valueIdentityDescription
gi|1325310795|ref|XP_023337013.1|3.081e-1736.15uncharacterized protein LOC111708015 [Eurytemora a... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold646_size120253supercontigscaffold646_size120253:28797..32298 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
Note-
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold646_size120253-snap-gene-0.15-mRNA-1maker-scaffold646_size120253-snap-gene-0.15-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold646_size120253:28797..32298+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold646_size120253-snap-gene-0.15 ID=maker-scaffold646_size120253-snap-gene-0.15|Name=unknown|organism=Tigriopus kingsejongensis|type=gene|length=3502bp|location=Sequence derived from alignment at scaffold646_size120253:28797..32298+ (Tigriopus kingsejongensis)
ATGAACACTGCCTACATGGAACTCACTTCTCGGATGGAAATGGAGCCGGA
CAAAATCCCACCCGAGGTCTTTATGCGACGGAAGGACCTCTTGGATCAAG
TTCAGAAAGTCATTGATATTGTGGAACCCGGGCTCACACGACGGCGAGGT
TAGACAGTCCCTGCAGAAATGGAGTAGAATTTCAGACTGCCAAGTGGCTG
GAATTTGGAAAATTCATTAAATGTTGGTCCTTGGTTACCCGAGAAACTGA
CCCAACGGCCATTTTGCCTTGTTTCAACCCAATCTTTTTTTCCAGGAATT
TCGTTATTCGAATCATCCATTTGTCACTTGCAACTGGGGAGATTACTACA
CAAGGCGGATCGTTTTAGCGCTGAGGACTTTGAGGAACTCCTGGAAACTG
AAATTGCCTCGCTTCAAGTGAGTTTATCAATGGCCAGGGGTTCTTGTTAC
AAAACTATCATGAGACGGAGTGTCCAGGAAAAAGTGTCGGCTATTTCAAG
TAAGAATACAATGGCCCCCCAAGTTGGCCTTTTTGACCACAAAGGCCAGA
AACCGCACAAGTAGCTCCTCAAAACCATTCTCAAGTGAGTTCAGAAGTAG
GATAGCCACTCTGGGGCTCGTTAGATTCTCAAGATGGCGGGAGCGGGGTG
AATGGTTTGGTTTGGGCCGCAATGAGTGGCATACACACTGGACGTAGGCT
TTTTTAAGATAGCAGTCAGCTGATTTTTCGACCAACCCAGTTATTCTGAA
AGGTACATTAATCGGGCAAAACCATACCCTTAAAGAACAACAATGGTCAC
ACTGGGCAACGATGGCCGATATGTAAACAGGACGTAGTTATGTACTGCTA
TGCAGGTAGCTTAACAGGGGTCGTGCGTGTCAATCAATCACTAATTTGGG
TTGGATTATCCCTTATTGGACAGAGTTTCCCACCCACTCAGTGCCCAAGA
AGAAAGGAAAATCTCCCAAACGACCTCTTTTGATTCTGGAGGCCTAGCTT
TTCAGTACATACGATATGTACAGATAAGAAACACCTTCCAGTTTGATGCA
CCATGGATTACAGGATTGATCCCAGAATTCGAAGTCACGTGAATGTCCCT
CCATTGGAAACACCCAAACCAACGAGACGAGAAAGCTGTTGTAGGAGCCA
GATGAGTAACAGGACCAGTTTAAGTAGGTAAGCCTCTCGTTGGTTTGGGC
GCTTTTGTTGGCTTAGGCGCTTACCAGTGGAGGGACATTCACGTGACCTT
GACTTAAGTGATATGGGTAAAGGTATGTCTTTTACAAGTTTGCTCGCTGG
TAAACTCTGTGCCACTGTACGTATATAAGTGCTCAATTGCCTCATTTCCC
GTCCAAATGAGAGATGCATACGTCGGTCACCACACCCTGAAAGGCCACTT
TGTACATACTGTAGACGCGCTTTGTTTACAATCATTAAGGATTGAGTGCT
TCTCCTGAATTGAGCCAGAAAATATATGTTTTTTGCATCATGGTGACAGA
AAAATACCAGTTTGATGGTATCATGGAAGGATTAGATCTTAAGTGGAGCT
TCTTTTGACCTTTAATGACCCTCAATGATCTGGAATTGAAAATATTTTAA
AGTTGACCCCCAAGGCATCCTATTGCGCTTCTTGATAAGGCACTTTGGAC
AGAAGCAACCTTTTCAGAAGCTAATTTGACCAAATACACACAGGGGGGAA
AAAAATCTGCGATTGTTTGAAAAATTTCAAATTTTTTGGCAATTTTTTTT
AATCTTTCGAATGAACTGATTATCTGAAGAAGAAAAAAGACCCAAACGAA
CCTAGTCCTATTTAAGACCAATTCAGCTTGCATTCTGACAAAAAGGGAAA
CATTTGTTACGTATGGGTGGTAAAGATCTTTAAAAAGCCGATCACTTTCA
CCATTGCTCAATTGCAAATTTTGCAATGCGCCATGGGTTTACTTCTGAGA
TTAAAAAGCAGGTTTATGTGGAGGTGAAAAGGCAGTGGGTTTATTTTCTT
GGGTCTAAACTGTGATCAAAAGAACTCGTGGAACTCTTCACCTTGCAATG
CTAACTTGGGTTTGGTTGAAATGATCGAGGCTTTGTTCTGGAAACTAACC
AGGTACAGTTTATAAAAAGGGGTTGATTGAATGGAGATGTTATGGTTAAA
ATGAAGAAATTCGTTTTTAAGCATTTTATTTTGTTTAACTTTAAGTGGTC
TTGACTGTTTTTGTAAACTTGATGGACGAACAAAAAACAGTTAGAATGAA
TTGTTTTTCAGCTCTACGAATGGTCATTTTTCGACCTCTTCTAATTACCC
ATTACTCTAATATCCTATCCACTGTCTGGAAATTTCAGACCAACGCAGTT
TTCACGTGGATATTTTGATGTTCACATATATCATATTTTACTCTGTAAGC
TGAACTCTCTAACCTCTTAAATCGCCTAGCACTCTCAAATTAGTCCAAAT
TTTTAATCCGGGTTCTGAGCTTTTTTTTGATCTACTTGGCCAACGATTAA
AGGAGTTTTTCCTATTGAAAGTGTACAACGTGAGCTCCAAGAAGTCTGGT
TTGTACAGATGATCTCCAAGAAGGCTGGTATGTACAAATGACCTCCAAGA
AGGGAGGTTTGTACAAATGACCTCCAAGAAGGCTGGTTTGTACAAATGAC
CTCCAAGAAGGCTGGTTTGTACAAATGACCCCCCAAGAAGGCTGGTTTGT
ACAAATGACCTCCAAGAAGGCTGTCAAGTTTGCAGCAAGGAAGTCGTGTG
AAAATAGTGGTCCCCTTTCCTAGACAGAATATTTTTTTGCCAGCCTTTAG
CGTATGGGAAATGACTCAAAACATTCGATTCGATCGATTCTGAACACGTA
TGGAAAACGGCTTTCCTGCCAAATGCAGTTCTGAATTTCCAGTGTTTAGA
AAATTATGCACATTGACCATTACCATGCTGGAGCATTAGCATGTCCATTA
TACAGGTAAAAAATTGCACAAGCTTCTCCATCACACAAAAGGTTCAAGGT
TTCAACCCAATCATCTCACGTTGGTTAATTAAGGAGAAACTTTCCCGTCT
ACGAACACGTGCTAGTAACAAGTAGATTTAAGACAAGGCTCTGAAGTAGT
TCTATGAATTGGACAAATGAATATGTTTTTGTTAATGGGTTATTGTGTTC
TTAGGAAGCTCTTAAATGCTTGGAACACCATCCGGAAGGCACATTAGAGG
CTGCCACGCGCTACAAATGTGAGGCCGCTCTGTACGAGGCCGAGTACACC
AAGAAGTCTTTGACGAGCAAAGTTAAGGAAATCGAGAAAGAAGCCCAAAC
GAGAAAAGAACAACGTGATGCGAAAGAAAAGGCGGCGGCCGATCTCAACC
AGAGATCTCAAGACACCCAGGCCCACATTGATGACTTTGATTATCTGGAC
GGTTTATTGGAAAAGGACGATGCATCCCCGCCTCAAGTCTCCAAGGCTCC
AACTGCGTCGGGTCACGTAGGCAAATCGGGAAAACAGAAGAAGAACAAAT
AA
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Synonyms
The feature 'unknown' has the following synonyms
Synonym
Tk08808
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