60s ribosomal protein l27a, maker-scaffold646_size120253-snap-gene-0.18 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of 60s ribosomal protein l27a vs. L. salmonis genes
Match: EMLSAG00000012539 (supercontig:LSalAtl2s:LSalAtl2s923:150712:153740:1 gene:EMLSAG00000012539 transcript:EMLSAT00000012539 description:"maker-LSalAtl2s923-augustus-gene-0.23") HSP 1 Score: 269.626 bits (688), Expect = 4.028e-88 Identity = 125/142 (88.03%), Postives = 132/142 (92.96%), Query Frame = 0 Query: 176 MSTNKKKTRKLRGHVSHGHGRVGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHANQPNQYCPGVNLDKLWSLVSEQTRLKYEKNTKKAPVIDVSRAGFFKVLGKGNLPKQPVIVKARFFSRQAEEKIKKVG 317 MSTNKKKTRKLRGHVSHGHGR+GKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHA+ NQYCP VNLDKLWSLVSEQTR KY K+ KKAPVIDV++AG+FKVLGKG LP QPVIVKAR FSR+AEEKIK VG Sbjct: 1 MSTNKKKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHAHTINQYCPSVNLDKLWSLVSEQTREKYAKDKKKAPVIDVTKAGYFKVLGKGLLPNQPVIVKARLFSRKAEEKIKSVG 142
BLAST of 60s ribosomal protein l27a vs. L. salmonis genes
Match: EMLSAG00000005993 (supercontig:LSalAtl2s:LSalAtl2s324:130653:152658:1 gene:EMLSAG00000005993 transcript:EMLSAT00000005993 description:"snap_masked-LSalAtl2s324-processed-gene-1.24") HSP 1 Score: 50.447 bits (119), Expect = 2.993e-7 Identity = 36/105 (34.29%), Postives = 59/105 (56.19%), Query Frame = 0 Query: 2 IKLRIALVH----LCGGALISRKHILSAAHCFCRVLISCSYLDKGKPKMFVPRPSSV-----VVEFSVPP--PESL-EVSRVIIHPLYQSSWTPRSHDMAILELQ 94 I +R H CGG+LI+R+ +LSAAHCFC + C +G ++ + + + + ++ P P+ L +V RVII+P Y+ ++ HD+A+LELQ Sbjct: 38 ISIRTVGTHSSLSFCGGSLINRQWVLSAAHCFC-IFNPCFSDLQGNTQLDYEASTHLEAIVGLSDMTLLPRHPQLLKKVLRVIIYPKYKDNY----HDIALLELQ 137
BLAST of 60s ribosomal protein l27a vs. SwissProt
Match: gi|1350705|sp|P48161.1|RL27A_EUPCR (RecName: Full=60S ribosomal protein L27a; AltName: Full=L29) HSP 1 Score: 194.512 bits (493), Expect = 4.499e-61 Identity = 94/149 (63.09%), Postives = 118/149 (79.19%), Query Frame = 0 Query: 176 MSTNKKKTRKLRGHVSHGHGRVGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHANQPNQYCPGVNLDKLWSLVSEQTRLKYEKNTKKAPVIDVSRAGFFKVLGKGNLPKQPVIVKARFFSRQAEEKIKKVGGACVLTA 324 M+ +K+ TRKLRGHVSHGHGRVGKHRKHPGGRG AG +HHHRIN KYHPG+ GK GMR+FH+ NQ YCP +NL KLWSLV+E+ R K + + K +IDV + G++KVLGKG LP+ P++VKA+ F+ AE++IK+VGGACVL A Sbjct: 1 MTHSKRNTRKLRGHVSHGHGRVGKHRKHPGGRGMAGPEHHHRINVFKYHPGHIGKHGMRHFHLMRNQ--YYCPSINLSKLWSLVTEEERQKAQTDKSKVILIDVVKHGYYKVLGKGLLPEVPLVVKAKLFTPTAEKRIKQVGGACVLRA 147
BLAST of 60s ribosomal protein l27a vs. SwissProt
Match: gi|1350711|sp|P48160.1|RL27A_DICDI (RecName: Full=60S ribosomal protein L27a) HSP 1 Score: 194.512 bits (493), Expect = 5.528e-61 Identity = 98/150 (65.33%), Postives = 115/150 (76.67%), Query Frame = 0 Query: 176 MSTNKKKTRKLRGHVSHGHGRVGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHANQPNQYCPGVNLDKLWSLVSEQTRLKY-EKNTKKAPVIDVSRAGFFKVLGKGNLPKQPVIVKARFFSRQAEEKIKKVGGACVLTA 324 M T K RK RG V G+GRVGKHRKHPGGRGNAGG HHRINFDKYHPGYFGK+GMR+FH+ NQ +CP V+L+K+W+LV E R KN APV+DV++ GFFKVLG G LP QP+IVKAR+FS+ AE+KIK VGGAC+L A Sbjct: 1 MPTRFSKHRKSRGDVCAGYGRVGKHRKHPGGRGNAGGLTHHRINFDKYHPGYFGKLGMRHFHLLRNQ--YHCPTVSLEKIWTLVPESVRKSLAAKNDGTAPVVDVTQKGFFKVLGHGILPTQPIIVKARYFSKVAEKKIKAVGGACILVA 148
BLAST of 60s ribosomal protein l27a vs. SwissProt
Match: gi|20143883|sp|Q9LR33.1|R27A2_ARATH (RecName: Full=60S ribosomal protein L27a-2) HSP 1 Score: 193.741 bits (491), Expect = 7.908e-61 Identity = 100/150 (66.67%), Postives = 117/150 (78.00%), Query Frame = 0 Query: 176 MSTNKKKTRKLRGHVSHGHGRVGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHANQPNQYCPGVNLDKLWSLVSEQTRLKYEKNTKKAPVIDVSRAGFFKVLGKGNLPK-QPVIVKARFFSRQAEEKIKKVGGACVLTA 324 M+T KK RK RGHVS GHGR+GKHRKHPGGRGNAGG HHHRI FDKYHPGYFGKVGMR FH N+ +CP VNLDKLWSLV E + K K+ P+IDV++ GFFKVLGKG+LP+ +P +VKA+ S+ AE+KIK+ GGA VLTA Sbjct: 1 MATALKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFHKLRNK--FFCPIVNLDKLWSLVPEDVKAKSSKDN--VPLIDVTQHGFFKVLGKGHLPENKPFVVKAKLISKTAEKKIKEAGGAVVLTA 146
BLAST of 60s ribosomal protein l27a vs. SwissProt
Match: gi|1710530|sp|P49637.2|R27A3_ARATH (RecName: Full=60S ribosomal protein L27a-3) HSP 1 Score: 193.356 bits (490), Expect = 1.288e-60 Identity = 100/150 (66.67%), Postives = 117/150 (78.00%), Query Frame = 0 Query: 176 MSTNKKKTRKLRGHVSHGHGRVGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHANQPNQYCPGVNLDKLWSLVSEQTRLKYEKNTKKAPVIDVSRAGFFKVLGKGNLPK-QPVIVKARFFSRQAEEKIKKVGGACVLTA 324 M+T KK RK RGHVS GHGR+GKHRKHPGGRGNAGG HHHRI FDKYHPGYFGKVGMR FH N+ +CP VNLDKLWSLV E + K K+ P+IDV++ GFFKVLGKG+LP+ +P +VKA+ S+ AE+KIK+ GGA VLTA Sbjct: 1 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFHKLRNK--FFCPIVNLDKLWSLVPEDVKAKSTKDN--VPLIDVTQHGFFKVLGKGHLPENKPFVVKAKLISKTAEKKIKEAGGAVVLTA 146
BLAST of 60s ribosomal protein l27a vs. SwissProt
Match: gi|12230515|sp|P57728.1|RL28B_SCHPO (RecName: Full=60S ribosomal protein L28-B) HSP 1 Score: 188.734 bits (478), Expect = 7.667e-59 Identity = 96/150 (64.00%), Postives = 114/150 (76.00%), Query Frame = 0 Query: 176 MSTNKKKTRKLRGHVSHGHGRVGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHANQPNQYCPGVNLDKLWSLVSEQTRLKY-EKNTKKAPVIDVSRAGFFKVLGKGNLPKQPVIVKARFFSRQAEEKIKKVGGACVLTA 324 M T+ KTRKLRGHVS GHGR+GKHRKHPGGRG AGG H R +FDKYHPGYFGKVGMR FH+ N + P VNLD+LW+LV +TR KY KNT+ APVI+V ++G+ KVLGKG LP PVI++ R+ SR+AEEKIK+ GG L A Sbjct: 1 MPTHTSKTRKLRGHVSAGHGRIGKHRKHPGGRGKAGGLQHLRSHFDKYHPGYFGKVGMRRFHLMKNP--LWRPTVNLDRLWTLVPNETREKYLGKNTEVAPVINVLQSGYGKVLGKGRLPDTPVIIQTRYVSRRAEEKIKQAGGVVELIA 148
BLAST of 60s ribosomal protein l27a vs. SwissProt
Match: gi|400993|sp|Q00454.1|RL27A_TETTH (RecName: Full=60S ribosomal protein L27a) HSP 1 Score: 186.808 bits (473), Expect = 4.994e-58 Identity = 97/151 (64.24%), Postives = 116/151 (76.82%), Query Frame = 0 Query: 176 MSTNKKKTRKLRGHVSHGHGRVGKHRKHPGGRGNAGG--QHHHRINFDKYHPGYFGKVGMRNFHVHANQPNQYCPGVNLDKLWSLVSEQTRLKYEKNTKKAPVIDVSRAGFFKVLGKGNLPKQPVIVKARFFSRQAEEKIKKVGGACVLTA 324 M ++ KKTRKLRGHVSHGHGRVGKHRK G HHHRI +K+HPGY+GK+GMR FH+ N +CP VN+DKLWSLVS+ TR KY ++ KK PVIDV++AGFFKVLGKG LP QPV+VKA++FS+ AE +I VGGACVLTA Sbjct: 1 MVSHLKKTRKLRGHVSHGHGRVGKHRKGGCRGGRGKAGGMHHHRILMEKWHPGYYGKLGMRTFHLKKNP--LHCPVVNIDKLWSLVSDATRQKYAEDKKKVPVIDVTKAGFFKVLGKGRLPNQPVVVKAKYFSKTAERRIVAVGGACVLTA 149
BLAST of 60s ribosomal protein l27a vs. SwissProt
Match: gi|1710529|sp|P36585.3|RL28A_SCHPO (RecName: Full=60S ribosomal protein L28-A; AltName: Full=L27A; AltName: Full=L29) HSP 1 Score: 185.652 bits (470), Expect = 1.324e-57 Identity = 95/150 (63.33%), Postives = 114/150 (76.00%), Query Frame = 0 Query: 176 MSTNKKKTRKLRGHVSHGHGRVGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHANQPNQYCPGVNLDKLWSLVSEQTRLKY-EKNTKKAPVIDVSRAGFFKVLGKGNLPKQPVIVKARFFSRQAEEKIKKVGGACVLTA 324 M T+ KTRKLRGHVS GHGR+GKHRKHPGGRG AGG H R +FDKYHPGYFGKVGMR FH+ N + P VNLD+LW+L+ + R KY KNT+ APVI+V ++G+ KVLGKG LP+ PVIV+ R+ SR+AEEKIK+ GG L A Sbjct: 1 MPTHVSKTRKLRGHVSAGHGRIGKHRKHPGGRGKAGGLQHLRSHFDKYHPGYFGKVGMRRFHLMKNP--LWRPTVNLDRLWTLLPNEARDKYLGKNTEVAPVINVLQSGYGKVLGKGRLPETPVIVQTRYVSRRAEEKIKQAGGVVELIA 148
BLAST of 60s ribosomal protein l27a vs. SwissProt
Match: gi|308153561|sp|P02406.3|RL28_YEAST (RecName: Full=60S ribosomal protein L28; AltName: Full=L27a; AltName: Full=L29; AltName: Full=Large ribosomal subunit protein uL15; AltName: Full=RP44; AltName: Full=RP62; AltName: Full=YL24) HSP 1 Score: 183.341 bits (464), Expect = 1.082e-56 Identity = 95/151 (62.91%), Postives = 109/151 (72.19%), Query Frame = 0 Query: 176 MSTNKKKTRKLRGHVSHGHGRVGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHANQPNQYCPGVNLDKLWSLVSEQTRLKYEKNTKK--APVIDVSRAGFFKVLGKGNLPKQPVIVKARFFSRQAEEKIKKVGGACVLTA 324 M + KTRK RGHVS G GR+GKHRKHPGGRG AGGQHHHRIN DKYHPGYFGKVGMR F H Q + + P +NLDKLW+L+ E R +Y K+ K APVID AG+ K+LGKG +P PVIVKARF S+ AEEKI+ GG L A Sbjct: 1 MPSRFTKTRKHRGHVSAGKGRIGKHRKHPGGRGMAGGQHHHRINMDKYHPGYFGKVGMRYF--HKQQAHFWKPVLNLDKLWTLIPEDKRDQYLKSASKETAPVIDTLAAGYGKILGKGRIPNVPVIVKARFVSKLAEEKIRAAGGVVELIA 149
BLAST of 60s ribosomal protein l27a vs. SwissProt
Match: gi|132845|sp|P08978.1|RL28_NEUCR (RecName: Full=60S ribosomal protein L28; AltName: Full=CRP1; AltName: Full=L27A; AltName: Full=L29) HSP 1 Score: 181.415 bits (459), Expect = 7.426e-56 Identity = 91/151 (60.26%), Postives = 111/151 (73.51%), Query Frame = 0 Query: 176 MSTNKKKTRKLRGHVSHGHGRVGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHANQPNQYCPGVNLDKLWSLVSEQTRLKYEKN--TKKAPVIDVSRAGFFKVLGKGNLPKQPVIVKARFFSRQAEEKIKKVGGACVLTA 324 M T KTRK RGHVS G GRVGKHRKHPGGRG AGGQHHHR N DKYHPGYFGKVGMR+FH+ N +Q+ P +N++KLW+LV + R KY T+ APVID+ G+ K+LGKG LP+ P++V+AR+ S +AE KIK+ GG L A Sbjct: 1 MPTRFSKTRKHRGHVSAGKGRVGKHRKHPGGRGMAGGQHHHRTNLDKYHPGYFGKVGMRHFHLLRN--HQWAPILNIEKLWTLVPAEAREKYVSGAATETAPVIDLLSHGYAKLLGKGRLPQVPIVVRARYVSAEAERKIKEAGGVIELVA 149
BLAST of 60s ribosomal protein l27a vs. SwissProt
Match: gi|2500274|sp|P78987.1|RL27A_BLUGH (RecName: Full=60S ribosomal protein L27a; AltName: Full=L29) HSP 1 Score: 177.178 bits (448), Expect = 2.637e-54 Identity = 91/151 (60.26%), Postives = 108/151 (71.52%), Query Frame = 0 Query: 176 MSTNKKKTRKLRGHVSHGHGRVGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHANQPNQYCPGVNLDKLWSLVSEQTRLKY--EKNTKKAPVIDVSRAGFFKVLGKGNLPKQPVIVKARFFSRQAEEKIKKVGGACVLTA 324 M T+ KTRK RGHVS GHGRVGKHRKHPGGRG AGGQHHHR N DKYHPGYFGKVGMR FH N + + P +NL+KLWSL+ + R Y N PVID+ G+ KVLGKG +PK P++V+AR+FS++AE KI + GG L A Sbjct: 1 MPTHLSKTRKHRGHVSAGHGRVGKHRKHPGGRGLAGGQHHHRTNMDKYHPGYFGKVGMRYFHKQGN--HFWKPVLNLEKLWSLIPAEKREAYLSSTNPDVIPVIDLLPLGYSKVLGKGRIPKVPLVVRARWFSKEAERKITEAGGVVELVA 149
BLAST of 60s ribosomal protein l27a vs. nr
Match: gi|225712762|gb|ACO12227.1| (60S ribosomal protein L27a [Lepeophtheirus salmonis] >gi|225713762|gb|ACO12727.1| 60S ribosomal protein L27a [Lepeophtheirus salmonis] >gi|290462325|gb|ADD24210.1| 60S ribosomal protein L27a [Lepeophtheirus salmonis] >gi|290562277|gb|ADD38535.1| 60S ribosomal protein L27a [Lepeophtheirus salmonis]) HSP 1 Score: 276.559 bits (706), Expect = 9.197e-91 Identity = 130/149 (87.25%), Postives = 139/149 (93.29%), Query Frame = 0 Query: 176 MSTNKKKTRKLRGHVSHGHGRVGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHANQPNQYCPGVNLDKLWSLVSEQTRLKYEKNTKKAPVIDVSRAGFFKVLGKGNLPKQPVIVKARFFSRQAEEKIKKVGGACVLTA 324 MSTNKKKTRKLRGHVSHGHGR+GKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHA+ NQYCP VNLDKLWSLVSEQTR KY K+ KKAPVIDV++AG+FKVLGKG LP QPVIVKAR FSR+AEEKIK VGGAC+L+A Sbjct: 1 MSTNKKKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHAHTINQYCPSVNLDKLWSLVSEQTREKYAKDKKKAPVIDVTKAGYFKVLGKGLLPNQPVIVKARLFSRKAEEKIKSVGGACILSA 149
BLAST of 60s ribosomal protein l27a vs. nr
Match: gi|961374964|gb|ALS04226.1| (60S ribosomal protein L27a [Acartia pacifica]) HSP 1 Score: 270.781 bits (691), Expect = 1.611e-88 Identity = 128/149 (85.91%), Postives = 137/149 (91.95%), Query Frame = 0 Query: 176 MSTNKKKTRKLRGHVSHGHGRVGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHANQPNQYCPGVNLDKLWSLVSEQTRLKYEKNTKKAPVIDVSRAGFFKVLGKGNLPKQPVIVKARFFSRQAEEKIKKVGGACVLTA 324 MSTNKKKTRKLRGHVSHGHGR+GKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVH N NQ+CP +NLDKLW+LV E+TR+K K+TK APVID S AG+FKVLGKG LPKQPVIVKARFFSR+AEEKIK VGGACVLTA Sbjct: 1 MSTNKKKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHPNVSNQFCPAINLDKLWTLVPEETRVKAAKDTKTAPVIDCSGAGYFKVLGKGILPKQPVIVKARFFSRRAEEKIKAVGGACVLTA 149
BLAST of 60s ribosomal protein l27a vs. nr
Match: gi|1325300846|ref|XP_023332015.1| (60S ribosomal protein L27a-like [Eurytemora affinis]) HSP 1 Score: 270.011 bits (689), Expect = 4.164e-88 Identity = 130/149 (87.25%), Postives = 133/149 (89.26%), Query Frame = 0 Query: 176 MSTNKKKTRKLRGHVSHGHGRVGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHANQPNQYCPGVNLDKLWSLVSEQTRLKYEKNTKKAPVIDVSRAGFFKVLGKGNLPKQPVIVKARFFSRQAEEKIKKVGGACVLTA 324 MST KKKTRKLRGHVSHGHGR+GKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVH N N YCP +NLDKLWSLVSEQTR KY KAPVID SRAG+FKVLGKG LPKQPVIVKARFFSR AEEKIK VGGACVLTA Sbjct: 1 MSTCKKKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHPNISNNYCPAINLDKLWSLVSEQTRTKYADVKDKAPVIDCSRAGYFKVLGKGVLPKQPVIVKARFFSRVAEEKIKAVGGACVLTA 149
BLAST of 60s ribosomal protein l27a vs. nr
Match: gi|961375786|gb|ALS04637.1| (60S ribosomal protein L27a [Pseudodiaptomus poplesia] >gi|961376096|gb|ALS04792.1| 60S ribosomal protein L27a [Pseudodiaptomus poplesia] >gi|1148369128|gb|AQS22800.1| 60S ribosomal protein l27a [Pseudodiaptomus poplesia]) HSP 1 Score: 268.085 bits (684), Expect = 1.962e-87 Identity = 128/149 (85.91%), Postives = 134/149 (89.93%), Query Frame = 0 Query: 176 MSTNKKKTRKLRGHVSHGHGRVGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHANQPNQYCPGVNLDKLWSLVSEQTRLKYEKNTKKAPVIDVSRAGFFKVLGKGNLPKQPVIVKARFFSRQAEEKIKKVGGACVLTA 324 MST KKKTRKLRGHVSHGHGR+GKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVH N +CP +NLDKLW+LVSEQTR KY + KAPVID SRAGFFKVLGKG LPKQPVIVKARFFSR+AEEKIK VGGACVLTA Sbjct: 1 MSTQKKKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHPNMSIHHCPAINLDKLWTLVSEQTRKKYADSKDKAPVIDCSRAGFFKVLGKGVLPKQPVIVKARFFSRRAEEKIKAVGGACVLTA 149
BLAST of 60s ribosomal protein l27a vs. nr
Match: gi|961376548|gb|ALS05018.1| (60S ribosomal protein L27a [Centropages dorsispinatus]) HSP 1 Score: 267.7 bits (683), Expect = 2.385e-87 Identity = 127/149 (85.23%), Postives = 134/149 (89.93%), Query Frame = 0 Query: 176 MSTNKKKTRKLRGHVSHGHGRVGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHANQPNQYCPGVNLDKLWSLVSEQTRLKYEKNTKKAPVIDVSRAGFFKVLGKGNLPKQPVIVKARFFSRQAEEKIKKVGGACVLTA 324 MST KKKTRKLRGHVSHGHGR+GKHRKHPGGRGN+GGQHHHRINFDKYHPGYFGKVGMRNFHVH N N +CP +NLDKLW+LVSEQTR KY T KAPVID +RAG FKVLGKG LPKQPVIVKARFFSR+AEEKIK VGGACVLTA Sbjct: 1 MSTCKKKTRKLRGHVSHGHGRIGKHRKHPGGRGNSGGQHHHRINFDKYHPGYFGKVGMRNFHVHPNISNNFCPAINLDKLWTLVSEQTRTKYASVTDKAPVIDCNRAGIFKVLGKGALPKQPVIVKARFFSRRAEEKIKAVGGACVLTA 149
BLAST of 60s ribosomal protein l27a vs. nr
Match: gi|961374966|gb|ALS04227.1| (60S ribosomal protein L27a [Acartia pacifica]) HSP 1 Score: 265.774 bits (678), Expect = 1.779e-86 Identity = 127/149 (85.23%), Postives = 136/149 (91.28%), Query Frame = 0 Query: 176 MSTNKKKTRKLRGHVSHGHGRVGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHANQPNQYCPGVNLDKLWSLVSEQTRLKYEKNTKKAPVIDVSRAGFFKVLGKGNLPKQPVIVKARFFSRQAEEKIKKVGGACVLTA 324 MSTNKKKTRKLRGHVSHGHGR+GKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVH N NQ+ P +NLDKLW+LV E+TR+K K+TK APVID S AG+FKVLGKG LPKQPVIVKARFFSR+AEEKIK VGGACVLTA Sbjct: 1 MSTNKKKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHPNVSNQFRPAINLDKLWTLVPEETRVKAAKDTKTAPVIDCSGAGYFKVLGKGILPKQPVIVKARFFSRRAEEKIKAVGGACVLTA 149
BLAST of 60s ribosomal protein l27a vs. nr
Match: gi|225718318|gb|ACO15005.1| (60S ribosomal protein L27a [Caligus clemensi]) HSP 1 Score: 261.922 bits (668), Expect = 5.408e-85 Identity = 129/149 (86.58%), Postives = 139/149 (93.29%), Query Frame = 0 Query: 176 MSTNKKKTRKLRGHVSHGHGRVGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHANQPNQYCPGVNLDKLWSLVSEQTRLKYEKNTKKAPVIDVSRAGFFKVLGKGNLPKQPVIVKARFFSRQAEEKIKKVGGACVLTA 324 MSTNKKKTRKLRGHVSHGHGR+GKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHA+ NQYCP VNLDKLWSLVS+QTR KY K+ KKAPVIDV++AG+FKVLGKG LP QPVIVKAR FSR+AEEKIK VGGAC+L+A Sbjct: 1 MSTNKKKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHAHTANQYCPSVNLDKLWSLVSDQTRDKYAKDKKKAPVIDVTKAGYFKVLGKGLLPDQPVIVKARLFSRKAEEKIKSVGGACILSA 149
BLAST of 60s ribosomal protein l27a vs. nr
Match: gi|961375782|gb|ALS04635.1| (60S ribosomal protein L27a [Pseudodiaptomus poplesia] >gi|961375784|gb|ALS04636.1| 60S ribosomal protein L27a [Pseudodiaptomus poplesia]) HSP 1 Score: 259.61 bits (662), Expect = 4.257e-84 Identity = 125/149 (83.89%), Postives = 132/149 (88.59%), Query Frame = 0 Query: 176 MSTNKKKTRKLRGHVSHGHGRVGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHANQPNQYCPGVNLDKLWSLVSEQTRLKYEKNTKKAPVIDVSRAGFFKVLGKGNLPKQPVIVKARFFSRQAEEKIKKVGGACVLTA 324 MST KKKTRKLRGHVSHGHGR+GKHRKH GGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFH H+N Y P +NLDKLW+LVSEQTR KY + KAPVID SRAG FKVLGKG+LPKQPVIVKARFFSR+AEEKIK VGGACVLTA Sbjct: 1 MSTCKKKTRKLRGHVSHGHGRIGKHRKHSGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHKHSNLAVYYSPTINLDKLWTLVSEQTRKKYADSKDKAPVIDCSRAGIFKVLGKGSLPKQPVIVKARFFSRRAEEKIKAVGGACVLTA 149
BLAST of 60s ribosomal protein l27a vs. nr
Match: gi|961376440|gb|ALS04964.1| (60S ribosomal protein L27a [Pseudodiaptomus poplesia]) HSP 1 Score: 256.529 bits (654), Expect = 7.836e-83 Identity = 124/149 (83.22%), Postives = 129/149 (86.58%), Query Frame = 0 Query: 176 MSTNKKKTRKLRGHVSHGHGRVGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHANQPNQYCPGVNLDKLWSLVSEQTRLKYEKNTKKAPVIDVSRAGFFKVLGKGNLPKQPVIVKARFFSRQAEEKIKKVGGACVLTA 324 MST KKTRKL GHVSHGHGR+GKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVH N +CP +NLDKLW+LVSEQT KY KAPVID S AGFFKVLGKG LPKQPVIVKARFFSR+AEEKIK VGGACVLTA Sbjct: 1 MSTQNKKTRKLPGHVSHGHGRIGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHPNMSIHHCPAINLDKLWTLVSEQTMKKYADRKDKAPVIDCSIAGFFKVLGKGVLPKQPVIVKARFFSRRAEEKIKAVGGACVLTA 149
BLAST of 60s ribosomal protein l27a vs. nr
Match: gi|559373032|gb|AHB12474.1| (60S Ribosomal Protein L27A [Pantala flavescens]) HSP 1 Score: 254.603 bits (649), Expect = 3.840e-82 Identity = 120/149 (80.54%), Postives = 135/149 (90.60%), Query Frame = 0 Query: 176 MSTNKKKTRKLRGHVSHGHGRVGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHANQPNQYCPGVNLDKLWSLVSEQTRLKYEKNTKKAPVIDVSRAGFFKVLGKGNLPKQPVIVKARFFSRQAEEKIKKVGGACVLTA 324 MST+KKKTRKLRGHVSHGHGR+GKHRKHPGGRGNAGG HHHRINFDKYHPGYFGKVGMRNFH+ N+ +CP +NLDKLW+LVSEQTRLKY++N +KAPVIDV +AG++KVLGKG LPKQPVIV+A+FFSR AEEKIK VGG CVL A Sbjct: 1 MSTHKKKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRINFDKYHPGYFGKVGMRNFHLRKNK--LWCPSINLDKLWTLVSEQTRLKYKENKEKAPVIDVVKAGYYKVLGKGRLPKQPVIVRAKFFSRSAEEKIKAVGGCCVLQA 147 The following BLAST results are available for this feature:
BLAST of 60s ribosomal protein l27a vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 2
BLAST of 60s ribosomal protein l27a vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of 60s ribosomal protein l27a vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold646_size120253:54957..65514+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold646_size120253-snap-gene-0.18 ID=maker-scaffold646_size120253-snap-gene-0.18|Name=60s ribosomal protein l27a|organism=Tigriopus kingsejongensis|type=gene|length=10558bp|location=Sequence derived from alignment at scaffold646_size120253:54957..65514+ (Tigriopus kingsejongensis)back to top Synonyms
The feature '60s ribosomal protein l27a' has the following synonyms
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