AGAP001242-PA, maker-scaffold666_size115941-snap-gene-0.10 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of AGAP001242-PA vs. L. salmonis genes
Match: EMLSAG00000005250 (supercontig:LSalAtl2s:LSalAtl2s27:551387:588866:1 gene:EMLSAG00000005250 transcript:EMLSAT00000005250 description:"snap_masked-LSalAtl2s27-processed-gene-6.4") HSP 1 Score: 51.6026 bits (122), Expect = 5.516e-8 Identity = 32/114 (28.07%), Postives = 61/114 (53.51%), Query Frame = 0 Query: 2 VLTIGEIAYTQDKRFTPIHEHGSEVWMLKITSPEVDDTGEYECQLSYHEDEEERYSLAFSLRVLNSRAYIQD--DRDLHVEKGSQLRLSCSI-LAASTSPDYVLWYHDGKVLNY 112 VLT +T D+RF+ H +++W L++ ++ D GEY+CQ+ + E + S + L V + A I ++++HV+ S+++L + L V WY +GK +++ Sbjct: 72 VLTSNTFTFTGDQRFSA-HMGSNDLWTLQLKFTQLKDAGEYQCQI----NTEPKISHSVFLYVKEAEARIDSPTNKEVHVQHQSRVQLRXVVDLGDQQESAAVFWYLNGKTIDW 180
BLAST of AGAP001242-PA vs. nr
Match: gi|1325317951|ref|XP_023340721.1| (lachesin-like [Eurytemora affinis]) HSP 1 Score: 132.109 bits (331), Expect = 1.373e-32 Identity = 72/210 (34.29%), Postives = 108/210 (51.43%), Query Frame = 0 Query: 2 VLTIGEIAYTQDKRFTPIHEHGSEVWMLKITSPEVDDTGEYECQLSYHEDEEERYSLAFSLRVLNSRAYIQDDRDLHVEKGSQLRLSCSILAASTSPDYVLWYHDGKVLNYSPSVDILTDTSQATSTSSDLAAQQPMAVTQADMKRQRLKDSEMAAGDKNKANDELDLHHNNGGVVSRLSIDNVRRSLHSGNYTCEPSNARAASITVHIV 211 +LTIG I YT+D RFT IH G+ W LKI SP V+D+G YECQ+SYH+D E++ L F+L VL SRA I ++D+++ +GS + L C I P Y+ WY + V++YS + I+ L L ++N ++S+L+I + + SGNYTC P+NA S+ +++V Sbjct: 79 ILTIGMIRYTRDNRFTAIHAEGNNFWGLKILSPRVEDSGLYECQVSYHDDVEKKLKLPFTLTVLESRARILGNQDIYMREGSAVELECGIENIPAPPAYIYWYKENSVISYSATQGIV-----------------------------------------------LSLQNSNNTLISKLTIKSASPA-DSGNYTCAPANALTDSVFLNVV 240
BLAST of AGAP001242-PA vs. nr
Match: gi|347965575|ref|XP_321911.5| (AGAP001242-PA [Anopheles gambiae str. PEST] >gi|333470448|gb|EAA01771.6| AGAP001242-PA [Anopheles gambiae str. PEST]) HSP 1 Score: 120.939 bits (302), Expect = 9.044e-29 Identity = 76/228 (33.33%), Postives = 109/228 (47.81%), Query Frame = 0 Query: 2 VLTIGEIAYTQDKRFTPIHEHGSEVWMLKITSPEVDDTGEYECQLSYHEDEEERYSLAFSLRVLNSRAYIQDDRDLHVEKGSQLRLSCSILAASTSPDYVLWYHDGKVLNYSPSVDILTDTSQATSTSSDLAAQQPMAVTQADMKRQRLKDSEMAAGDKNKANDELDLHHNNGGVVSRLSIDNVRRSLHSGNYTCEPSNARAASITVHIVDEGHLAKAQLAYDKVDAA 229 +LT+G + YT D+RF +H GS+ W L+ITSP+ D+G YECQ+S E + S AF + V+ S+A I + +L V+ GS + L+C L + P ++ WY G+V+NYS I T Q T TS RL V+SR S + SGNYTC PSN+ +AS+ VH++ H A Q + + A Sbjct: 54 ILTVGILTYTNDQRFQSLHTDGSDEWTLRITSPQARDSGVYECQVS----TEPKISQAFRVNVVVSKANILGNSELFVKSGSDINLTCEALQSPQPPSFIYWYKGGRVINYSQRGGISVLTEQQTRTS-------------------RL-------------------------VISRASPSD------SGNYTCAPSNSDSASVVVHVIKGEHPAAMQHGINGANVA 227
BLAST of AGAP001242-PA vs. nr
Match: gi|108878684|gb|EAT42909.1| (AAEL005599-PA [Aedes aegypti]) HSP 1 Score: 120.553 bits (301), Expect = 1.342e-28 Identity = 75/219 (34.25%), Postives = 106/219 (48.40%), Query Frame = 0 Query: 2 VLTIGEIAYTQDKRFTPIHEHGSEVWMLKITSPEVDDTGEYECQLSYHEDEEERYSLAFSLRVLNSRAYIQDDRDLHVEKGSQLRLSCSILAASTSPDYVLWYHDGKVLNYSPSVDILTDTSQATSTSSDLAAQQPMAVTQADMKRQRLKDSEMAAGDKNKANDELDLHHNNGGVVSRLSIDNVRRSLHSGNYTCEPSNARAASITVHIVDEGHLAKAQ 220 +LT+G + YT D+RF +H GS+ W L+ITSP+ D+G YECQ+S E + S AF L V+ S+A I + +L V+ GS + L+C L + P ++ WY G+V+NYS I T Q T TS RL V++R S + SGNYTC PSN+ +AS+ VH++ H A Q Sbjct: 52 ILTVGILTYTNDQRFQSLHTEGSDEWTLRITSPQARDSGVYECQVS----TEPKISQAFRLNVVVSKAKILGNAELFVKSGSDINLTCVALQSPQPPSFIYWYKGGRVINYSQRGGISVLTEQQTRTS-------------------RL-------------------------VIARASPSD------SGNYTCSPSNSDSASVVVHVIKGEHPAAMQ 216
BLAST of AGAP001242-PA vs. nr
Match: gi|1000196600|gb|KXJ71043.1| (hypothetical protein RP20_CCG021647 [Aedes albopictus]) HSP 1 Score: 120.168 bits (300), Expect = 1.505e-28 Identity = 75/219 (34.25%), Postives = 106/219 (48.40%), Query Frame = 0 Query: 2 VLTIGEIAYTQDKRFTPIHEHGSEVWMLKITSPEVDDTGEYECQLSYHEDEEERYSLAFSLRVLNSRAYIQDDRDLHVEKGSQLRLSCSILAASTSPDYVLWYHDGKVLNYSPSVDILTDTSQATSTSSDLAAQQPMAVTQADMKRQRLKDSEMAAGDKNKANDELDLHHNNGGVVSRLSIDNVRRSLHSGNYTCEPSNARAASITVHIVDEGHLAKAQ 220 +LT+G + YT D+RF +H GS+ W L+ITSP+ D+G YECQ+S E + S AF L V+ S+A I + +L V+ GS + L+C L + P ++ WY G+V+NYS I T Q T TS RL V++R S + SGNYTC PSN+ +AS+ VH++ H A Q Sbjct: 52 ILTVGILTYTNDQRFQSLHTEGSDEWTLRITSPQARDSGVYECQVS----TEPKISQAFRLNVVVSKAKILGNAELFVKSGSDINLTCVALQSPQPPSFIYWYKGGRVINYSQRGGISVLTEQQTRTS-------------------RL-------------------------VIARASPSD------SGNYTCTPSNSDSASVVVHVIKGEHPAAMQ 216
BLAST of AGAP001242-PA vs. nr
Match: gi|1016164914|gb|KZC12076.1| (Hemicentin-2, partial [Dufourea novaeangliae]) HSP 1 Score: 119.398 bits (298), Expect = 1.952e-28 Identity = 72/213 (33.80%), Postives = 102/213 (47.89%), Query Frame = 0 Query: 2 VLTIGEIAYTQDKRFTPIHEHGSEVWMLKITSPEVDDTGEYECQLSYHEDEEERYSLAFSLRVLNSRAYIQDDRDLHVEKGSQLRLSCSILAASTSPDYVLWYHDGKVLNYSPSVDILTDTSQATSTSSDLAAQQPMAVTQADMKRQRLKDSEMAAGDKNKANDELDLHHNNGGVVSRLSIDNVRRSLHSGNYTCEPSNARAASITVHIVDEG 214 +LT+G + YT D+RF +H GS+ W LKITSP+V D+G YECQ+S E + S AF+L V+ S+A I + +LH++ GS + L+C +L P ++ WY V+NYS I T + T TS RL S D SGNYTC PS+A +AS+ VH+++ G Sbjct: 63 ILTVGILTYTNDQRFQSLHSDGSDEWTLKITSPQVRDSGIYECQVS----TEPKISQAFNLSVVVSKAKINGNSELHIKSGSDINLTCVVLQTPEPPSFIYWYKGDHVINYSQRGGISVVTEKQTRTS-------------------RLLISRALPAD-------------------------------SGNYTCAPSSAESASVLVHVLNGG 221
BLAST of AGAP001242-PA vs. nr
Match: gi|1000203238|gb|KXJ75108.1| (hypothetical protein RP20_CCG012200 [Aedes albopictus]) HSP 1 Score: 120.553 bits (301), Expect = 2.706e-28 Identity = 75/219 (34.25%), Postives = 106/219 (48.40%), Query Frame = 0 Query: 2 VLTIGEIAYTQDKRFTPIHEHGSEVWMLKITSPEVDDTGEYECQLSYHEDEEERYSLAFSLRVLNSRAYIQDDRDLHVEKGSQLRLSCSILAASTSPDYVLWYHDGKVLNYSPSVDILTDTSQATSTSSDLAAQQPMAVTQADMKRQRLKDSEMAAGDKNKANDELDLHHNNGGVVSRLSIDNVRRSLHSGNYTCEPSNARAASITVHIVDEGHLAKAQ 220 +LT+G + YT D+RF +H GS+ W L+ITSP+ D+G YECQ+S E + S AF L V+ S+A I + +L V+ GS + L+C L + P ++ WY G+V+NYS I T Q T TS RL V++R S + SGNYTC PSN+ +AS+ VH++ H A Q Sbjct: 80 ILTVGILTYTNDQRFQSLHTEGSDEWTLRITSPQARDSGVYECQVS----TEPKISQAFRLNVVVSKAKILGNAELFVKSGSDINLTCVALQSPQPPSFIYWYKGGRVINYSQRGGISVLTEQQTRTS-------------------RL-------------------------VIARASPSD------SGNYTCTPSNSDSASVVVHVIKGEHPAAMQ 244
BLAST of AGAP001242-PA vs. nr
Match: gi|987916780|ref|XP_015434403.1| (PREDICTED: basement membrane-specific heparan sulfate proteoglycan core protein-like [Dufourea novaeangliae]) HSP 1 Score: 120.553 bits (301), Expect = 3.199e-28 Identity = 74/219 (33.79%), Postives = 104/219 (47.49%), Query Frame = 0 Query: 2 VLTIGEIAYTQDKRFTPIHEHGSEVWMLKITSPEVDDTGEYECQLSYHEDEEERYSLAFSLRVLNSRAYIQDDRDLHVEKGSQLRLSCSILAASTSPDYVLWYHDGKVLNYSPSVDILTDTSQATSTSSDLAAQQPMAVTQADMKRQRLKDSEMAAGDKNKANDELDLHHNNGGVVSRLSIDNVRRSLHSGNYTCEPSNARAASITVHIVDEGHLAKAQ 220 +LT+G + YT D+RF +H GS+ W LKITSP+V D+G YECQ+S E + S AF+L V+ S+A I + +LH++ GS + L+C +L P ++ WY V+NYS I T + T TS RL S D SGNYTC PS+A +AS+ VH+++ H A Q Sbjct: 91 ILTVGILTYTNDQRFQSLHSDGSDEWTLKITSPQVRDSGIYECQVS----TEPKISQAFNLSVVVSKAKINGNSELHIKSGSDINLTCVVLQTPEPPSFIYWYKGDHVINYSQRGGISVVTEKQTRTS-------------------RLLISRALPAD-------------------------------SGNYTCAPSSAESASVLVHVLNGEHPAAMQ 255
BLAST of AGAP001242-PA vs. nr
Match: gi|1031995336|ref|XP_001120724.4| (PREDICTED: limbic system-associated membrane protein, partial [Apis mellifera]) HSP 1 Score: 117.472 bits (293), Expect = 3.485e-28 Identity = 70/213 (32.86%), Postives = 102/213 (47.89%), Query Frame = 0 Query: 2 VLTIGEIAYTQDKRFTPIHEHGSEVWMLKITSPEVDDTGEYECQLSYHEDEEERYSLAFSLRVLNSRAYIQDDRDLHVEKGSQLRLSCSILAASTSPDYVLWYHDGKVLNYSPSVDILTDTSQATSTSSDLAAQQPMAVTQADMKRQRLKDSEMAAGDKNKANDELDLHHNNGGVVSRLSIDNVRRSLHSGNYTCEPSNARAASITVHIVDEG 214 +LT+G + YT D+RF +H GS+ W L+I+SP+V D+G YECQ+S E + S AF+L V+ S+A I + +L+++ GS + L+C +L P ++ WY D V+NYS I T + T TS RL S D SGNYTC PS A +AS+ VH+++ G Sbjct: 21 ILTVGILTYTNDQRFQSLHRDGSDEWTLRISSPQVRDSGTYECQVS----TESKISQAFNLSVVVSKAKINGNSELYIKSGSDINLTCIVLQTPEPPSFIYWYKDDHVINYSQRGGINVVTEKQTRTS-------------------RLLISRALPAD-------------------------------SGNYTCAPSTAESASVLVHVLNGG 179
BLAST of AGAP001242-PA vs. nr
Match: gi|1218254554|ref|XP_021706887.1| (Down syndrome cell adhesion molecule [Aedes aegypti] >gi|1218254556|ref|XP_021706888.1| Down syndrome cell adhesion molecule [Aedes aegypti] >gi|1218254558|ref|XP_021706889.1| Down syndrome cell adhesion molecule [Aedes aegypti] >gi|1218254560|ref|XP_021706890.1| Down syndrome cell adhesion molecule [Aedes aegypti] >gi|1218254562|ref|XP_021706891.1| Down syndrome cell adhesion molecule [Aedes aegypti]) HSP 1 Score: 120.553 bits (301), Expect = 3.611e-28 Identity = 75/219 (34.25%), Postives = 106/219 (48.40%), Query Frame = 0 Query: 2 VLTIGEIAYTQDKRFTPIHEHGSEVWMLKITSPEVDDTGEYECQLSYHEDEEERYSLAFSLRVLNSRAYIQDDRDLHVEKGSQLRLSCSILAASTSPDYVLWYHDGKVLNYSPSVDILTDTSQATSTSSDLAAQQPMAVTQADMKRQRLKDSEMAAGDKNKANDELDLHHNNGGVVSRLSIDNVRRSLHSGNYTCEPSNARAASITVHIVDEGHLAKAQ 220 +LT+G + YT D+RF +H GS+ W L+ITSP+ D+G YECQ+S E + S AF L V+ S+A I + +L V+ GS + L+C L + P ++ WY G+V+NYS I T Q T TS RL V++R S + SGNYTC PSN+ +AS+ VH++ H A Q Sbjct: 80 ILTVGILTYTNDQRFQSLHTEGSDEWTLRITSPQARDSGVYECQVS----TEPKISQAFRLNVVVSKAKILGNAELFVKSGSDINLTCVALQSPQPPSFIYWYKGGRVINYSQRGGISVLTEQQTRTS-------------------RL-------------------------VIARASPSD------SGNYTCSPSNSDSASVVVHVIKGEHPAAMQ 244
BLAST of AGAP001242-PA vs. nr
Match: gi|1121168744|ref|XP_019529952.1| (PREDICTED: hemicentin-1-like [Aedes albopictus] >gi|1121168747|ref|XP_019529953.1| PREDICTED: hemicentin-1-like [Aedes albopictus] >gi|1121183642|ref|XP_019534766.1| PREDICTED: hemicentin-1-like isoform X2 [Aedes albopictus]) HSP 1 Score: 120.168 bits (300), Expect = 4.006e-28 Identity = 75/219 (34.25%), Postives = 106/219 (48.40%), Query Frame = 0 Query: 2 VLTIGEIAYTQDKRFTPIHEHGSEVWMLKITSPEVDDTGEYECQLSYHEDEEERYSLAFSLRVLNSRAYIQDDRDLHVEKGSQLRLSCSILAASTSPDYVLWYHDGKVLNYSPSVDILTDTSQATSTSSDLAAQQPMAVTQADMKRQRLKDSEMAAGDKNKANDELDLHHNNGGVVSRLSIDNVRRSLHSGNYTCEPSNARAASITVHIVDEGHLAKAQ 220 +LT+G + YT D+RF +H GS+ W L+ITSP+ D+G YECQ+S E + S AF L V+ S+A I + +L V+ GS + L+C L + P ++ WY G+V+NYS I T Q T TS RL V++R S + SGNYTC PSN+ +AS+ VH++ H A Q Sbjct: 80 ILTVGILTYTNDQRFQSLHTEGSDEWTLRITSPQARDSGVYECQVS----TEPKISQAFRLNVVVSKAKILGNAELFVKSGSDINLTCVALQSPQPPSFIYWYKGGRVINYSQRGGISVLTEQQTRTS-------------------RL-------------------------VIARASPSD------SGNYTCTPSNSDSASVVVHVIKGEHPAAMQ 244 The following BLAST results are available for this feature:
BLAST of AGAP001242-PA vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 21
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BLAST of AGAP001242-PA vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 0
BLAST of AGAP001242-PA vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold666_size115941:105317..115814+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold666_size115941-snap-gene-0.10 ID=maker-scaffold666_size115941-snap-gene-0.10|Name=AGAP001242-PA|organism=Tigriopus kingsejongensis|type=gene|length=10498bp|location=Sequence derived from alignment at scaffold666_size115941:105317..115814+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'AGAP001242-PA' has the following synonyms
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