AGAP009045-PA, maker-scaffold671_size114370-snap-gene-0.30 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of AGAP009045-PA vs. SwissProt
Match: gi|74949008|sp|Q9W3T5.1|SMIM4_DROME (RecName: Full=Small integral membrane protein 4) HSP 1 Score: 77.7962 bits (190), Expect = 1.488e-19 Identity = 38/68 (55.88%), Postives = 50/68 (73.53%), Query Frame = 0 Query: 12 LLQRLPGR-RFGVYRILPLFFFMGAALEYTMIHWHVGEVNFYRTYKKKMALDIVLKEERLVQSGQARA 78 LL PG+ RFGVYR LPLFF +GA LE++MI+W VGE NFYRT+K++ A + V +++ L QARA Sbjct: 11 LLDSWPGKKRFGVYRFLPLFFLLGAGLEFSMINWTVGETNFYRTFKRRQAKNYVEEQQHL----QARA 74
BLAST of AGAP009045-PA vs. SwissProt
Match: gi|205830728|sp|Q8C1Q6.2|SMIM4_MOUSE (RecName: Full=Small integral membrane protein 4; AltName: Full=Small nucleolar RNA host gene 8) HSP 1 Score: 57.3806 bits (137), Expect = 1.705e-11 Identity = 25/49 (51.02%), Postives = 35/49 (71.43%), Query Frame = 0 Query: 13 LQRLPGR-RFGVYRILPLFFFMGAALEYTMIHWHVGEVNFYRTYKKKMA 60 LQR+PG+ RFG+YR LP FF +G A+E+ MI VG+ FY Y++K + Sbjct: 11 LQRVPGKQRFGIYRFLPFFFVLGGAMEWIMIKVRVGQETFYDVYRRKAS 59
BLAST of AGAP009045-PA vs. SwissProt
Match: gi|205830727|sp|Q8WVI0.2|SMIM4_HUMAN (RecName: Full=Small integral membrane protein 4) HSP 1 Score: 56.225 bits (134), Expect = 3.458e-11 Identity = 24/51 (47.06%), Postives = 35/51 (68.63%), Query Frame = 0 Query: 11 NLLQRLPGR-RFGVYRILPLFFFMGAALEYTMIHWHVGEVNFYRTYKKKMA 60 +LQR+PG+ RFG+YR LP FF +G +E+ MI VG+ FY Y++K + Sbjct: 9 RILQRVPGKQRFGIYRFLPFFFVLGGTMEWIMIKVRVGQETFYDVYRRKAS 59
BLAST of AGAP009045-PA vs. nr
Match: gi|646705170|gb|KDR13037.1| (hypothetical protein L798_13305 [Zootermopsis nevadensis]) HSP 1 Score: 79.337 bits (194), Expect = 1.000e-17 Identity = 36/69 (52.17%), Postives = 53/69 (76.81%), Query Frame = 0 Query: 6 NERLANLLQRLPGRR-FGVYRILPLFFFMGAALEYTMIHWHVGEVNFYRTYKKKMALDIV---LKEERL 70 + RL L R PG++ FG+YR LP+FF +GAALE++MI+WHVGEVNFYRT+K++ A + ++EE++ Sbjct: 5 SSRLRWFLDRWPGKKYFGIYRFLPIFFVLGAALEFSMINWHVGEVNFYRTFKRRQAQQLAQERIQEEKI 73
BLAST of AGAP009045-PA vs. nr
Match: gi|969469237|ref|XP_015046301.1| (uncharacterized protein Dyak_GE29135 [Drosophila yakuba] >gi|948565863|gb|KRK06741.1| uncharacterized protein Dyak_GE29135 [Drosophila yakuba]) HSP 1 Score: 79.337 bits (194), Expect = 1.241e-17 Identity = 39/71 (54.93%), Postives = 52/71 (73.24%), Query Frame = 0 Query: 12 LLQRLPGR-RFGVYRILPLFFFMGAALEYTMIHWHVGEVNFYRTYKKKMALDIVLKEERLVQSGQARALAS 81 LL PG+ RFGVYR LPLFFF+GA LE++MI+W VGE NFYRT+K++ A + V +++ L QA+A S Sbjct: 11 LLDSWPGKKRFGVYRFLPLFFFLGAGLEFSMINWTVGETNFYRTFKRRQAKNYVEEQQHL----QAQATHS 77
BLAST of AGAP009045-PA vs. nr
Match: gi|1026568096|gb|OAD56561.1| (hypothetical protein WN48_03248 [Eufriesea mexicana]) HSP 1 Score: 78.9518 bits (193), Expect = 1.377e-17 Identity = 34/68 (50.00%), Postives = 48/68 (70.59%), Query Frame = 0 Query: 8 RLANLLQRLPGRRFGVYRILPLFFFMGAALEYTMIHWHVGEVNFYRTYKKKMALDIVLKEERLVQSGQ 75 ++ + ++PG+ FG +R LPLFF MG +E+ MIHWHVGEVNFY+TYK+++ D V E RL Q + Sbjct: 7 KIVKFVHKMPGKAFGEFRFLPLFFVMGGVIEFLMIHWHVGEVNFYKTYKRRIINDTV--EGRLRQMNE 72
BLAST of AGAP009045-PA vs. nr
Match: gi|970880484|ref|XP_015112025.1| (PREDICTED: small integral membrane protein 4 [Diachasma alloeum]) HSP 1 Score: 79.7221 bits (195), Expect = 1.641e-17 Identity = 38/66 (57.58%), Postives = 50/66 (75.76%), Query Frame = 0 Query: 9 LANLLQRLPGRR-FGVYRILPLFFFMGAALEYTMIHWHVGEVNFYRTYKKKMALDIVLKEERLVQS 73 L LL++ PG+R FGVYR LP+FF +GA LE++MI+W +GEVNFY TYKK+ +IV EE+L S Sbjct: 44 LGRLLKKFPGKRYFGVYRFLPVFFIVGAGLEFSMINWRIGEVNFYNTYKKRKVEEIV--EEKLHHS 107
BLAST of AGAP009045-PA vs. nr
Match: gi|939671033|ref|XP_014282212.1| (PREDICTED: small integral membrane protein 4 [Halyomorpha halys]) HSP 1 Score: 78.1814 bits (191), Expect = 3.036e-17 Identity = 41/76 (53.95%), Postives = 53/76 (69.74%), Query Frame = 0 Query: 3 VRRNERLANLLQRLPGRR-FGVYRILPLFFFMGAALEYTMIHWHV-GEVNFYRTYKKKMALDIVLKEERLVQSGQA 76 +RRNE L L PG+R FG++R LP+FF +GAALEY+MI+W G+VNFYRTYKK+ D K E+LV +A Sbjct: 1 MRRNESLKKFLDYWPGKRIFGIFRFLPIFFCLGAALEYSMINWDFRGQVNFYRTYKKRQIQD---KLEQLVHEEKA 73 The following BLAST results are available for this feature:
BLAST of AGAP009045-PA vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 0
BLAST of AGAP009045-PA vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 3
BLAST of AGAP009045-PA vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold671_size114370:28126..29154+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold671_size114370-snap-gene-0.30 ID=maker-scaffold671_size114370-snap-gene-0.30|Name=AGAP009045-PA|organism=Tigriopus kingsejongensis|type=gene|length=1029bp|location=Sequence derived from alignment at scaffold671_size114370:28126..29154+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'AGAP009045-PA' has the following synonyms
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