AGAP006594-PB, maker-scaffold67_size430214-snap-gene-2.7 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of AGAP006594-PB vs. L. salmonis genes
Match: EMLSAG00000004751 (supercontig:LSalAtl2s:LSalAtl2s2501:1197:4003:1 gene:EMLSAG00000004751 transcript:EMLSAT00000004751 description:"maker-LSalAtl2s2501-augustus-gene-0.2") HSP 1 Score: 65.4698 bits (158), Expect = 9.839e-14 Identity = 35/83 (42.17%), Postives = 51/83 (61.45%), Query Frame = 0 Query: 34 EMSAGFFISHADLVGPFAGSAFGITNTIAQLPGFIIPMLVANFAPNGT--LAEWRIIFYIAAGSKVVGAIVYLLFGSLELQPW 114 M AG F +H+D+ +AG GITN IA +PGF++P +V + +GT LA W +IFY +G ++ +VY + S E QPW Sbjct: 351 SMFAGVFSNHSDIASNYAGVLMGITNMIATIPGFVVPAVVGSLT-HGTFGLAPWHLIFYTTSGILLLELVVYSIMASGEEQPW 432
BLAST of AGAP006594-PB vs. L. salmonis genes
Match: EMLSAG00000012637 (supercontig:LSalAtl2s:LSalAtl2s954:83905:87259:-1 gene:EMLSAG00000012637 transcript:EMLSAT00000012637 description:"maker-LSalAtl2s954-augustus-gene-1.15") HSP 1 Score: 61.2326 bits (147), Expect = 3.108e-12 Identity = 31/88 (35.23%), Postives = 45/88 (51.14%), Query Frame = 0 Query: 37 AGFFISHADLVGPFAGSAFGITNTIAQLPGFIIPMLVANFAPNGTLAEWRIIFYIAAGSKVVGAIVYLLFGSLELQPWAMISPQDDVK 124 AGF I+H D+ +A GI+NTI +PG + P L + T EW+ +F+I A VG +Y S E Q W+ I +D + Sbjct: 270 AGFSINHLDIAPQYAAILMGISNTIGTIPGILSPALTGFIVQDKTPEEWQYVFFITASVYFVGGXLYGFMASGERQDWSKIEGEDHID 357
BLAST of AGAP006594-PB vs. L. salmonis genes
Match: EMLSAG00000005346 (supercontig:LSalAtl2s:LSalAtl2s2884:12993:13334:-1 gene:EMLSAG00000005346 transcript:EMLSAT00000005346 description:"maker-LSalAtl2s2884-augustus-gene-0.2") HSP 1 Score: 50.0618 bits (118), Expect = 1.601e-9 Identity = 27/61 (44.26%), Postives = 38/61 (62.30%), Query Frame = 0 Query: 56 GITNTIAQLPGFIIPMLVANFAPNGT--LAEWRIIFYIAAGSKVVGAIVYLLFGSLELQPW 114 GITN IA +PGF++P +V +GT LA W +IFY +G ++ +VY + S E QPW Sbjct: 2 GITNMIATIPGFVVPAVVGALT-HGTFGLAPWHLIFYTTSGILLLELVVYSIMASGEEQPW 61
BLAST of AGAP006594-PB vs. L. salmonis genes
Match: EMLSAG00000007408 (supercontig:LSalAtl2s:LSalAtl2s421:200439:202430:-1 gene:EMLSAG00000007408 transcript:EMLSAT00000007408 description:"augustus_masked-LSalAtl2s421-processed-gene-2.0") HSP 1 Score: 52.373 bits (124), Expect = 3.565e-9 Identity = 35/123 (28.46%), Postives = 59/123 (47.97%), Query Frame = 0 Query: 11 MGHLSDNIAQMVLITIAVSIHQLEMSAGFFISHADLVGPFAGSAFGITNTIAQLPGFIIPMLVANFAPNGTL-----AEWRIIFYIAAGSKVVGAIVYLLFGSLELQPWAMISPQDDVKEEKE 128 +G+ + + + + +AV +S GF ++H D+ +A GI+N + L G I P+ + + EW+ +F IA+ VG I Y +F S ELQ WA ++ V E+ E Sbjct: 450 VGYTRNEMVAIAGLILAVGCSGFAIS-GFNVNHLDIAPRYASILMGISNGVGTLSGMICPITTEQITKDHSSDWKLEVEWQHVFLIASSIHFVGVIFYAVFASGELQDWA----EEKVSEKIE 567
BLAST of AGAP006594-PB vs. L. salmonis genes
Match: EMLSAG00000010562 (supercontig:LSalAtl2s:LSalAtl2s701:102072:107986:1 gene:EMLSAG00000010562 transcript:EMLSAT00000010562 description:"maker-LSalAtl2s701-augustus-gene-1.16") HSP 1 Score: 48.521 bits (114), Expect = 8.943e-8 Identity = 30/103 (29.13%), Postives = 52/103 (50.49%), Query Frame = 0 Query: 12 GHLSDNIAQMVLITIAVSIHQLEMSAGFFISHADLVGPFAGSAFGITNTIAQLPGFIIPMLVANFAPNGTLAEWRIIFYIAAGSKVVGAIVYLLFGSLELQPW 114 GHLS + + ++A I L + A F+ ++ F S+ ++ + L G L+ + L WRI+F +A+ S ++G V++LFGS + QPW Sbjct: 352 GHLSTTHVRKLFNSLAFVIPALSLIALGFVGCNAILAVFLLSSLLVSAVVTPL-GLKSITLILHLIMLNNLEHWRIVFLMASASYLIGNTVFVLFGSGKEQPW 453
BLAST of AGAP006594-PB vs. SwissProt
Match: gi|74723817|sp|Q8NDX2.1|VGLU3_HUMAN (RecName: Full=Vesicular glutamate transporter 3; Short=VGluT3; AltName: Full=Solute carrier family 17 member 8) HSP 1 Score: 57.3806 bits (137), Expect = 1.934e-9 Identity = 40/121 (33.06%), Postives = 61/121 (50.41%), Query Frame = 0 Query: 7 LVAGMGHLSDNIAQMVLITIAVSIHQLEMSAGFFISHADLVGPFAGSAFGITNTIAQLPGFIIPMLVANFAPNGTLAEWRIIFYIAAGSKVVGAIVYLLFGSLELQPWAMISPQDDVKEEK 127 LV G H + +A L+ +AV +S GF ++H D+ +A GI+N + L G + P++V + T EW+ +F IAA G I Y +F S E Q WA +++ EEK Sbjct: 405 LVVGFSH-TKGVAISFLV-LAVGFSGFAIS-GFNVNHLDIAPRYASILMGISNGVGTLSGMVCPLIVGAMTRHKTREEWQNVFLIAALVHYSGVIFYGVFASGEKQEWA---DPENLSEEK 519
BLAST of AGAP006594-PB vs. SwissProt
Match: gi|187663979|sp|Q1L8X9.2|VGLU3_DANRE (RecName: Full=Vesicular glutamate transporter 3; Short=VGluT3; AltName: Full=Solute carrier family 17 member 8) HSP 1 Score: 57.3806 bits (137), Expect = 2.111e-9 Identity = 39/120 (32.50%), Postives = 60/120 (50.00%), Query Frame = 0 Query: 7 LVAGMGHLSDNIAQMVLITIAVSIHQLEMSAGFFISHADLVGPFAGSAFGITNTIAQLPGFIIPMLVANFAPNGTLAEWRIIFYIAAGSKVVGAIVYLLFGSLELQPWAMISPQDDVKEE 126 LV G H + +A LI +AV +S GF ++H D+ +A GI+N + L G + P++V + T EW+ +F IA+ G I Y +F S E Q WA P++ E+ Sbjct: 406 LVVGFSH-TRAVAISFLI-LAVGFSGFAIS-GFNVNHLDIAPRYASILMGISNGVGTLSGMVCPLIVGALTKHKTRLEWQHVFVIASMVHYTGVIFYAIFASGEKQDWA--DPENTSDEK 520
BLAST of AGAP006594-PB vs. SwissProt
Match: gi|187608848|sp|P34272.2|SL173_CAEEL (RecName: Full=Uncharacterized transporter slc-17.3) HSP 1 Score: 52.373 bits (124), Expect = 9.811e-8 Identity = 30/93 (32.26%), Postives = 48/93 (51.61%), Query Frame = 0 Query: 37 AGFFISHADLVGPFAGSAFGITNTIAQLPGFIIPMLVANFAPNGTLAEWRIIFYIAAGSKVVGAIVYLLFGSLELQPWAMISPQDDVKEEKEK 129 +GF+ S L + + I+ +A + P +++ F +GT AEW+ IF + + + ++LLFGS ELQ WA + D EKEK Sbjct: 412 SGFYTSLLSLAPQYTATMSAISMFVAMIGRLTTPAVMSMFRKDGTAAEWQNIFIGCSLAHIFSGSIFLLFGSGELQDWAKVE-DDQEMNEKEK 503
BLAST of AGAP006594-PB vs. nr
Match: gi|1325314105|ref|XP_023338728.1| (sialin-like isoform X2 [Eurytemora affinis]) HSP 1 Score: 107.457 bits (267), Expect = 1.663e-24 Identity = 45/98 (45.92%), Postives = 70/98 (71.43%), Query Frame = 0 Query: 18 IAQMVLITIAVSIHQLEMSAGFFISHADLVGPFAGSAFGITNTIAQLPGFIIPMLVANFAPNGTLAEWRIIFYIAAGSKVVGAIVYLLFGSLELQPWA 115 + + L+++ ++IH+L M+ GF+ SH+D+ GP +G FGITNT AQ+PGF+ P+LV++ +GTL EW +F ++ ++G VYL FGS EL+PWA Sbjct: 440 VGHVALLSLGLTIHELAMTGGFYFSHSDIGGPHSGVLFGITNTFAQIPGFLTPILVSSMTQHGTLDEWYTVFQVSGIIYIIGGFVYLGFGSSELEPWA 537
BLAST of AGAP006594-PB vs. nr
Match: gi|1325314103|ref|XP_023338727.1| (sialin-like isoform X1 [Eurytemora affinis]) HSP 1 Score: 107.457 bits (267), Expect = 1.760e-24 Identity = 45/98 (45.92%), Postives = 70/98 (71.43%), Query Frame = 0 Query: 18 IAQMVLITIAVSIHQLEMSAGFFISHADLVGPFAGSAFGITNTIAQLPGFIIPMLVANFAPNGTLAEWRIIFYIAAGSKVVGAIVYLLFGSLELQPWA 115 + + L+++ ++IH+L M+ GF+ SH+D+ GP +G FGITNT AQ+PGF+ P+LV++ +GTL EW +F ++ ++G VYL FGS EL+PWA Sbjct: 445 VGHVALLSLGLTIHELAMTGGFYFSHSDIGGPHSGVLFGITNTFAQIPGFLTPILVSSMTQHGTLDEWYTVFQVSGIIYIIGGFVYLGFGSSELEPWA 542
BLAST of AGAP006594-PB vs. nr
Match: gi|871232829|ref|XP_012938009.1| (PREDICTED: sialin-like [Aplysia californica]) HSP 1 Score: 105.531 bits (262), Expect = 8.012e-24 Identity = 55/126 (43.65%), Postives = 78/126 (61.90%), Query Frame = 0 Query: 5 AALVAGMGHL--SDNIAQMVLITIAVSIHQLEMSAGFFISHADLVGPFAGSAFGITNTIAQLPGFIIPMLVANFAPNGTLAEWRIIFYIAAGSKVVGAIVYLLFGSLELQPWAMISPQDDVKEEKE 128 A + G G + +I +V++TIAV + S G+FI+H D+ PFAG+ FGITNT A +PG + P +VA PNGT AEW+ FY+AA GAI Y++FGS E+QPWA + + + + E Sbjct: 460 ACFLVGTGFMECDQSIGAVVMLTIAVGLCGFHFS-GYFINHGDIAPPFAGTLFGITNTAATIPGILSPYVVAAMTPNGTRAEWQSAFYVAAAIYCFGAIWYVIFGSGEIQPWAKPNTEGGDRGDAE 584
BLAST of AGAP006594-PB vs. nr
Match: gi|908471576|ref|XP_013088727.1| (PREDICTED: sialin-like [Biomphalaria glabrata]) HSP 1 Score: 99.3673 bits (246), Expect = 1.324e-22 Identity = 54/126 (42.86%), Postives = 76/126 (60.32%), Query Frame = 0 Query: 5 AALVAGMGHLS--DNIAQMVLITIAVSIHQLEMSAGFFISHADLVGPFAGSAFGITNTIAQLPGFIIPMLVANFAPNGTLAEWRIIFYIAAGSKVVGAIVYLLFGSLELQPWAMISPQDDVKEEKE 128 AA + G G + +VLIT+A+ + S G+FI+H D+ P+AG+ FGI+NT+A +PG I P +V+ NGT EWR FY+AAG + G I Y++FG E+QPWA +VK E E Sbjct: 129 AAFLVGAGFMECHQQAETVVLITVAIGLCGFHFS-GYFINHGDIAPPYAGTLFGISNTLATVPGIISPYIVSAMTKNGTKEEWRSTFYVAAGIYLFGNIWYIIFGRGEIQPWA----GGEVKGEVE 249
BLAST of AGAP006594-PB vs. nr
Match: gi|676486142|ref|XP_009063883.1| (hypothetical protein LOTGIDRAFT_107883 [Lottia gigantea] >gi|556096991|gb|ESO85643.1| hypothetical protein LOTGIDRAFT_107883 [Lottia gigantea]) HSP 1 Score: 94.7449 bits (234), Expect = 5.128e-20 Identity = 48/111 (43.24%), Postives = 65/111 (58.56%), Query Frame = 0 Query: 13 HLSDNIAQMVLITIAVSIHQLEMSAGFFISHADLVGPFAGSAFGITNTIAQLPGFIIPMLVANFAPNGTLAEWRIIFYIAAGSKVVGAIVYLLFGSLELQPWAMISPQDDV 123 I +V++T+AV + S GFFI+H+D+ FAG+ FGI+NT A +PG + P +V NGT EW+ FYIAAG GA+ Y L G E+Q WAMI +D Sbjct: 352 ECDQQIEAVVMVTLAVGMCGFHFS-GFFINHSDIAPRFAGTLFGISNTAATIPGILAPYIVGALTKNGTREEWQTTFYIAAGVYFFGAVFYALTGEGEVQDWAMIPASEDT 461
BLAST of AGAP006594-PB vs. nr
Match: gi|1242793643|ref|XP_022337131.1| (sialin-like [Crassostrea virginica]) HSP 1 Score: 92.4337 bits (228), Expect = 3.614e-19 Identity = 45/112 (40.18%), Postives = 69/112 (61.61%), Query Frame = 0 Query: 21 MVLITIAVSIHQLEMSAGFFISHADLVGPFAGSAFGITNTIAQLPGFIIPMLVANFAPNGTLAEWRIIFYIAAGSKVVGAIVYLLFGSLELQPWAM--ISPQDDVKEEKEKP 130 + L+++AV L AG+ ++H D +AG +GITNT+A +PG + P++ PN + +EWR +F++ AG + GAIVY LFGS +Q WA + Q +K+EKE P Sbjct: 385 VALLSLAVMFTGL-CRAGYVVNHVDFAPRYAGVLYGITNTVATVPGMVAPIVAGALTPNKSQSEWRYVFFVCAGFDLFGAIVYGLFGSGTIQDWARDEVEIQVKIKDEKEDP 495
BLAST of AGAP006594-PB vs. nr
Match: gi|1207909779|ref|XP_021369698.1| (sialin-like isoform X1 [Mizuhopecten yessoensis]) HSP 1 Score: 90.8929 bits (224), Expect = 1.324e-18 Identity = 40/95 (42.11%), Postives = 61/95 (64.21%), Query Frame = 0 Query: 21 MVLITIAVSIHQLEMSAGFFISHADLVGPFAGSAFGITNTIAQLPGFIIPMLVANFAPNGTLAEWRIIFYIAAGSKVVGAIVYLLFGSLELQPWA 115 ++ ++IAV L AG+ ++H D +AG+ +GITNT A +PG + P++ PN T AEWR +FY+ A + GA+V+ +FGS EL+PWA Sbjct: 389 VIFLSIAVMFTGL-CRAGYVVNHVDFAPKYAGTLYGITNTAATVPGMVAPIVAGALTPNDTQAEWRNVFYVCAAFDLFGALVFGMFGSGELEPWA 482
BLAST of AGAP006594-PB vs. nr
Match: gi|1351482482|ref|XP_013398298.2| (uncharacterized transporter slc-17.2-like [Lingula anatina]) HSP 1 Score: 90.5077 bits (223), Expect = 1.543e-18 Identity = 48/111 (43.24%), Postives = 69/111 (62.16%), Query Frame = 0 Query: 21 MVLITIAVSIHQLEMSAGFFISHADLVGPFAGSAFGITNTIAQLPGFIIPMLVANFAPNGTLAEWRIIFYIAAGSKVVGAIVYLLFGSLELQPWAM---ISPQDDVKEEKE 128 + IT+AV+ + AG I+HAD+ FAG FGI+NT++ LPG I P + + PNGT EW+ + +I+ G GA+ +L+F S E QPW +SPQD+ KE+KE Sbjct: 354 VAFITLAVAFSAGGI-AGNQINHADIAPRFAGELFGISNTVSALPGIISPSVASALTPNGTREEWQRVLFISCGIYCFGALFFLIFASGEEQPWNKPDNLSPQDEQKEKKE 463
BLAST of AGAP006594-PB vs. nr
Match: gi|1207909781|ref|XP_021369707.1| (sialin-like isoform X2 [Mizuhopecten yessoensis] >gi|1205909271|gb|OWF55374.1| Sialin [Mizuhopecten yessoensis]) HSP 1 Score: 90.1225 bits (222), Expect = 1.969e-18 Identity = 40/95 (42.11%), Postives = 61/95 (64.21%), Query Frame = 0 Query: 21 MVLITIAVSIHQLEMSAGFFISHADLVGPFAGSAFGITNTIAQLPGFIIPMLVANFAPNGTLAEWRIIFYIAAGSKVVGAIVYLLFGSLELQPWA 115 ++ ++IAV L AG+ ++H D +AG+ +GITNT A +PG + P++ PN T AEWR +FY+ A + GA+V+ +FGS EL+PWA Sbjct: 387 VIFLSIAVMFTGL-CRAGYVVNHVDFAPKYAGTLYGITNTAATVPGMVAPIVAGALTPNDTQAEWRNVFYVCAAFDLFGALVFGMFGSGELEPWA 480
BLAST of AGAP006594-PB vs. nr
Match: gi|1061469726|gb|ODM89413.1| (Sialin [Orchesella cincta]) HSP 1 Score: 89.3521 bits (220), Expect = 4.113e-18 Identity = 41/95 (43.16%), Postives = 60/95 (63.16%), Query Frame = 0 Query: 21 MVLITIAVSIHQLEMSAGFFISHADLVGPFAGSAFGITNTIAQLPGFIIPMLVANFAPNGTLAEWRIIFYIAAGSKVVGAIVYLLFGSLELQPWA 115 + ++TI + + G+ +S +L +AG GITNT LPGF+ P+ V+ F PNGT EW ++F IAAG ++GA++Y +FGS ELQ WA Sbjct: 434 IAMVTIGQAFGEFSFMGGYMLSIFELAPKYAGIIIGITNTFGVLPGFLCPLFVSLFTPNGTREEWILVFGIAAGMNLLGALLYAIFGSCELQSWA 528 The following BLAST results are available for this feature:
BLAST of AGAP006594-PB vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 5
BLAST of AGAP006594-PB vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 23
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BLAST of AGAP006594-PB vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold67_size430214:280569..281031+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold67_size430214-snap-gene-2.7 ID=maker-scaffold67_size430214-snap-gene-2.7|Name=AGAP006594-PB|organism=Tigriopus kingsejongensis|type=gene|length=463bp|location=Sequence derived from alignment at scaffold67_size430214:280569..281031+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'AGAP006594-PB' has the following synonyms
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