longitudinals lacking, maker-scaffold691_size110934-snap-gene-0.34 (gene) Tigriopus kingsejongensis
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Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of longitudinals lacking vs. L. salmonis genes
Match: EMLSAG00000007228 (supercontig:LSalAtl2s:LSalAtl2s404:613982:614914:-1 gene:EMLSAG00000007228 transcript:EMLSAT00000007228 description:"augustus-LSalAtl2s404-processed-gene-6.4") HSP 1 Score: 98.2117 bits (243), Expect = 4.113e-24 Identity = 80/290 (27.59%), Postives = 134/290 (46.21%), Query Frame = 0
Query: 10 LKWNDFQAHVSGACHTLREEADFFDVVLGCDQSQGRTLQAHKVILAACSSFFKDILKQHEASTVSSHTSPFIYLRGVPFTHMAAILDFMYQGEVSVRQTDLSAFLAVAEDLQVKGL---AQPGCDPIQPTPD---ELPAAASPLPNIKLEEPPSSPANPLASTSDFQSVKVEPLIMDEAMEQIVEGNPEDFLYETVEETDTGSEDPLHRNDETTLSAAGSPSWTNGEVVRLADGRGGQCLRCGKGFALFVTAVR-HFKLSHFESENLPCPYCQSVMRTKSYLKDHLRRKH 292
LKWN F ++ + L E + FDV L + R ++AHK +L ACS F+ I+K + T P+IYL+G+ H+ ++ F+Y GEV V Q +L F+A+A++ ++K L P PTP +LP +S + N+ + SP P A + + P M++ + N +ET+E T ++D ++ + A N + G+ QC +C + A+R H + +H S+ + C C +T+ L +H R H
Sbjct: 9 LKWNSFDSNFKESLSDLYENEELFDVTLI---TGSRQIKAHKFVLCACSPVFRSIIK-----SAPPQTHPWIYLKGINVDHLELLISFLYHGEVKVIQEELDDFIAIAKEFEIKCLNTEKMPTSLNDSPTPSPPRDLPDLSS-VDNVSDDLLSISP--PTAQIEKYYT----PYEMNDLY---IAQNISPDKFETME---TNNKDIKLDKNKKHIRALDLE--INRYYTKQRTGKKFQCKKCS-YLTPYGNAIRNHVESNHISSKGVVCTLCSKKFKTRLSLHNHCYRVH 274
BLAST of longitudinals lacking vs. L. salmonis genes
Match: EMLSAG00000002455 (supercontig:LSalAtl2s:LSalAtl2s1471:52173:56863:1 gene:EMLSAG00000002455 transcript:EMLSAT00000002455 description:"maker-LSalAtl2s1471-snap-gene-0.12") HSP 1 Score: 100.908 bits (250), Expect = 4.995e-24 Identity = 51/120 (42.50%), Postives = 76/120 (63.33%), Query Frame = 0
Query: 8 YCLKWNDFQAHVSGACHTLREEADFFDVVLGCDQSQGRTLQAHKVILAACSSFFKDILKQHEASTVSSHTSPFIYLRGVPFTHMAAILDFMYQGEVSVRQTDLSAFLAVAEDLQVKGLAQ 127
YCL+WN+ Q ++ L F DV L +G L+AHK++L+ACS +F+ +L +T H P ++LR V ++ M A+L+FMY+GEVSV Q +LS+ L VAE L++KGLA+
Sbjct: 10 YCLRWNNHQHNLLSVFEDLLNHEAFVDVTLAV---EGLQLKAHKMVLSACSPYFQSML----YNTPDRH--PIVFLRDVRYSEMKALLEFMYRGEVSVDQENLSSLLKVAEGLKIKGLAE 120
BLAST of longitudinals lacking vs. L. salmonis genes
Match: EMLSAG00000009238 (supercontig:LSalAtl2s:LSalAtl2s588:466746:467909:-1 gene:EMLSAG00000009238 transcript:EMLSAT00000009238 description:"snap_masked-LSalAtl2s588-processed-gene-4.20") HSP 1 Score: 97.8265 bits (242), Expect = 1.962e-23 Identity = 99/351 (28.21%), Postives = 151/351 (43.02%), Query Frame = 0
Query: 7 NYCLKWNDFQAHVSGACHTLREEADFFDVVL--GC--DQSQGRTLQAHKVILAACSSFFKDILKQHEASTVSS-HTSPFIYLRGVPFTHMAAILDFMYQGEVSVRQTDLSAFLAVAEDLQVKGLAQ-----PGCDPI-------------------------QPTPDELPAAASPLPNI------KLEEPPSSPANPLASTSDFQ---SVKVEPLIMDE--------AMEQIVE--GNPEDFLYETVEETDTGSEDPLHRNDETTLSAAGSPSWTNGEVVRLADGRGGQCLRCGKGFALFVTAVRHFKLSHFESEN--LPCPYCQSVMRTKSYLKDHLRRKHKVYQGPFKG 301
NYCL+ ND++ + + +LR++ F DV L GC + + +AH+VIL+ACSS+F +L + T+S H P + L V + A+LDFMY G+V++ LS+FLAVA+ L++KGL + P DP+ Q + P + P I EE PSS S++D + S+ P +++ AM I + P+D L T E + S RN+ T C C K F ++ RH K HF++EN + CP C +++ L HL R H V + +G
Sbjct: 19 NYCLRLNDYEKKYAESFRSLRDDESFADVTLVAGCSSEDDSSTSFKAHRVILSACSSYFHSLLIK----TLSPWHVHPVLLLTDVRPRDLHALLDFMYLGQVNINNEALSSFLAVAQRLRIKGLCETTFQIPKKDPVYVATGHGKRAKFMTTTTSSVLRSTTQQIIQQHPHKTTDAPIILATSAANQEEVPSSAVTEFISSNDGEFIPSLPSHPFMINTDPTTPTPAAMVTIEDKMNEPQD-LTPTHTEVISPSTPKKDRNNRKT------------------------CGYCHKDFHE-MSLKRHIKDVHFKNENTFVICPQCCKQYASQNSLYSHLNRVHGVKKEMMEG 339
BLAST of longitudinals lacking vs. L. salmonis genes
Match: EMLSAG00000003189 (supercontig:LSalAtl2s:LSalAtl2s176:671224:672666:1 gene:EMLSAG00000003189 transcript:EMLSAT00000003189 description:"augustus-LSalAtl2s176-processed-gene-6.4") HSP 1 Score: 94.3597 bits (233), Expect = 1.374e-22 Identity = 84/330 (25.45%), Postives = 132/330 (40.00%), Query Frame = 0
Query: 6 DNYCLKWNDFQAHVSGACHTLREEADFFDVVLGCDQSQGRTLQAHKVILAACSSFFKDILKQHEASTVSSHTSPFIYLRGVPFTHMAAILDFMYQGEVSVRQTDLSAFLAVAEDLQVKGLAQ--------PGCDPIQPTPDELPAAASPLPNIKLEEPPSSPANPLASTSDFQSVKVEPLIMDEAMEQIVEGNPEDFLYETVEETDTGSEDPLHRNDETTLS---AAGSPSWTNGEVVRLADG-----------------------------RGGQCLRCGKGFALF--VTAVRHFKLSHFESENLPCPYCQSVMRTKSYLKDHLRRKHK 293
+N C+KWN++++++ L + FDV L S R ++AHKVIL+ACS F+ I++ +VS H P IYL+ + F H+ IL F+Y GE+ V +++ L VA+ Q+KGL G D + +L ++ + K + S NP D + ++ E E FLY + D + N + +S A S + N R A+G +G +C +C F F RH + H ++ C C +T LK H HK
Sbjct: 5 ENLCIKWNEYESNLKEGLSELLHNEELFDVTL---ISGSRVIKAHKVILSACSPVFRSIIQ-----SVSFHPHPVIYLKDINFDHLELILSFLYYGEMRVASDEINDLLCVADVFQIKGLYNNTITSATINGEDIFIQSNSDLYSSIN-----KSFQHQSCNTNPNKECQDI-------FAPNSSLNTKRENPDESFLYSLESSYNPDLVDGVQSNCDGDVSYDMANSSSRYLNNACGREAEGANISTKDDNEKYHQSLKPEIKKHFKKSINKGFECKKC--KFTTFDRTCINRHIEYRHMITKGFCCHVCNKNYKTICTLKRHNTHFHK 312
BLAST of longitudinals lacking vs. L. salmonis genes
Match: EMLSAG00000007481 (supercontig:LSalAtl2s:LSalAtl2s42:537429:544881:1 gene:EMLSAG00000007481 transcript:EMLSAT00000007481 description:"maker-LSalAtl2s42-augustus-gene-5.9") HSP 1 Score: 96.2857 bits (238), Expect = 1.411e-22 Identity = 47/127 (37.01%), Postives = 80/127 (62.99%), Query Frame = 0
Query: 1 MGSDLDNYCLKWNDFQAHVSGACHTLREEADFFDVVLGCDQSQGRTLQAHKVILAACSSFFKDILKQHEASTVSSHTSPFIYLRGVPFTHMAAILDFMYQGEVSVRQTDLSAFLAVAEDLQVKGLAQ 127
MG++ +CLKWN+ ++ + TL EE DV L ++G+ L+AHKVIL+ACS +F+ + + ++ P IY++ V F ++ A++++MY+GE +V Q L +F+ AE LQ++GLA+
Sbjct: 1 MGTE-QQFCLKWNNHRSTILSVFDTLLEEESLVDVTL---TAEGQFLRAHKVILSACSPYFRIMFR------AANEKHPVIYMQNVDFENLKALVEYMYKGEANVPQHMLPSFIRTAESLQIRGLAE 117
BLAST of longitudinals lacking vs. SwissProt
Match: gi|73621174|sp|Q7KRI2.1|LOLAL_DROME (RecName: Full=Longitudinals lacking protein-like; Short=Lola-like protein; AltName: Full=Protein Batman) HSP 1 Score: 108.997 bits (271), Expect = 2.365e-28 Identity = 59/127 (46.46%), Postives = 83/127 (65.35%), Query Frame = 0
Query: 1 MGSDLDNYCLKWNDFQAHVSGACHTLREEADFFDVVLGCDQSQGRTLQAHKVILAACSSFFKDILKQHEASTVSSHTSPFIYLRGVPFTHMAAILDFMYQGEVSVRQTDLSAFLAVAEDLQVKGLAQ 127
M SD + LKWNDFQ ++ + LR+E F DV L C+ G+T +AHK++L+ACS +FK +L+++ S H P I L+ V + H+ AIL+FMY GEV+V Q L AFL A+ L+VKGLA+
Sbjct: 2 MSSD-QQFFLKWNDFQTNMVTSFRHLRDEKSFTDVTLACE---GQTCKAHKMVLSACSPYFKALLEENP----SKH--PIIILKDVSYIHLQAILEFMYAGEVNVSQEQLPAFLKTADRLKVKGLAE 118
BLAST of longitudinals lacking vs. SwissProt
Match: gi|13124701|sp|Q01295.2|BRC1_DROME (RecName: Full=Broad-complex core protein isoforms 1/2/3/4/5) HSP 1 Score: 110.153 bits (274), Expect = 1.171e-25 Identity = 52/124 (41.94%), Postives = 82/124 (66.13%), Query Frame = 0
Query: 4 DLDNYCLKWNDFQAHVSGACHTLREEADFFDVVLGCDQSQGRTLQAHKVILAACSSFFKDILKQHEASTVSSHTSPFIYLRGVPFTHMAAILDFMYQGEVSVRQTDLSAFLAVAEDLQVKGLAQ 127
D ++CL+WN++Q+ ++ A LR++ F DV L C +GR+++AH+V+L+ACS +F+++LK ST H P I L+ V F + A+++F+Y GEV+V Q L +FL AE L+V GL Q
Sbjct: 3 DTQHFCLRWNNYQSSITSAFENLRDDEAFVDVTLAC---EGRSIKAHRVVLSACSPYFRELLK----STPCKH--PVILLQDVNFMDLHALVEFIYHGEVNVHQKSLQSFLKTAEVLRVSGLTQ 117
BLAST of longitudinals lacking vs. SwissProt
Match: gi|13123979|sp|Q24206.2|BRC4_DROME (RecName: Full=Broad-complex core protein isoform 6) HSP 1 Score: 110.153 bits (274), Expect = 1.382e-25 Identity = 52/124 (41.94%), Postives = 82/124 (66.13%), Query Frame = 0
Query: 4 DLDNYCLKWNDFQAHVSGACHTLREEADFFDVVLGCDQSQGRTLQAHKVILAACSSFFKDILKQHEASTVSSHTSPFIYLRGVPFTHMAAILDFMYQGEVSVRQTDLSAFLAVAEDLQVKGLAQ 127
D ++CL+WN++Q+ ++ A LR++ F DV L C+ GR+++AH+V+L+ACS +F+++LK ST H P I L+ V F + A+++F+Y GEV+V Q L +FL AE L+V GL Q
Sbjct: 3 DTQHFCLRWNNYQSSITSAFENLRDDEAFVDVTLACE---GRSIKAHRVVLSACSPYFRELLK----STPCKH--PVILLQDVNFMDLHALVEFIYHGEVNVHQKSLQSFLKTAEVLRVSGLTQ 117
BLAST of longitudinals lacking vs. SwissProt
Match: gi|33112291|sp|Q8IN81.1|FRU_DROME (RecName: Full=Sex determination protein fruitless) HSP 1 Score: 104.76 bits (260), Expect = 8.298e-24 Identity = 58/181 (32.04%), Postives = 93/181 (51.38%), Query Frame = 0
Query: 8 YCLKWNDFQAHVSGACHTLREEADFFDVVLGCDQSQGRTLQAHKVILAACSSFFKDILKQHEASTVSSHTSPFIYLRGVPFTHMAAILDFMYQGEVSVRQTDLSAFLAVAEDLQVKGLA-------QPGCDPIQPTPDELPAAASPLPNIKLEEPPSSPANPLASTSDFQSVKVEPLIMDE 181
+CL+WN+ +++G +L + DV L C +G T++AH+ IL+ACS +F+ I Q++ H P IYL+ V ++ M ++LDFMY+GEV+V Q+ L FL AE LQV+GL + CD ++ + P P A+ + + D + E + DE
Sbjct: 106 FCLRWNNHPTNLTGVLTSLLQREALCDVTLAC---EGETVKAHQTILSACSPYFETIFLQNQ------HPHPIIYLKDVRYSEMRSLLDFMYKGEVNVGQSSLPMFLKTAESLQVRGLTDNNNLNYRSDCDKLRDSAASSPTGRGPSNYTGGLGGAGGVADAMRESRDSLRSRCERDLRDE 277
BLAST of longitudinals lacking vs. SwissProt
Match: gi|47117851|sp|P42282.3|TTKA_DROME (RecName: Full=Protein tramtrack, alpha isoform; AltName: Full=Repressor protein fushi tarazu; AltName: Full=Tramtrack p88) HSP 1 Score: 101.679 bits (252), Expect = 1.048e-22 Identity = 51/130 (39.23%), Postives = 78/130 (60.00%), Query Frame = 0
Query: 8 YCLKWNDFQAHVSGACHTLREEADFFDVVLGCDQSQGRTLQAHKVILAACSSFFKDILKQHEASTVSSHTSPFIYLRGVPFTHMAAILDFMYQGEVSVRQTDLSAFLAVAEDLQVKGLAQPGCDPIQPTP 137
+CL+WN+ Q+++ L F DV L +G+ L+AHK++L+ACS +F + H P + L+ VP++ M ++LDFMY+GEVSV Q L+AFL VAE L++KGL + D +P+P
Sbjct: 8 FCLRWNNHQSNLLSVFDQLLHAETFTDVTLAV---EGQHLKAHKMVLSACSPYFNTLFVSH------PEKHPIVILKDVPYSDMKSLLDFMYRGEVSVDQERLTAFLRVAESLRIKGLTEVNDD--KPSP 126
BLAST of longitudinals lacking vs. SwissProt
Match: gi|27923726|sp|Q24174.2|ABRU_DROME (RecName: Full=Protein abrupt; AltName: Full=Protein clueless) HSP 1 Score: 101.293 bits (251), Expect = 1.253e-22 Identity = 51/119 (42.86%), Postives = 69/119 (57.98%), Query Frame = 0
Query: 8 YCLKWNDFQAHVSGACHTLREEADFFDVVLGCDQSQGRTLQAHKVILAACSSFFKDILKQHEASTVSSHTSPFIYLRGVPFTHMAAILDFMYQGEVSVRQTDLSAFLAVAEDLQVKGLA 126
Y LKWNDFQ+ + + LR+E DF DV L CD+ R+ AHKV+L+ACS +F+ +LK + P + LR V + +L FMY GEV+V L FL A LQ++GLA
Sbjct: 78 YALKWNDFQSSILSSFRHLRDEEDFVDVTLACDE---RSFTAHKVVLSACSPYFRRLLKANPCE------HPIVILRDVRCDDVENLLSFMYNGEVNVSHEQLPDFLKTAHLLQIRGLA 187
BLAST of longitudinals lacking vs. SwissProt
Match: gi|20455517|sp|P17789.2|TTKB_DROME (RecName: Full=Protein tramtrack, beta isoform; AltName: Full=Repressor protein fushi tarazu; AltName: Full=Tramtrack p69) HSP 1 Score: 101.293 bits (251), Expect = 1.285e-22 Identity = 51/130 (39.23%), Postives = 78/130 (60.00%), Query Frame = 0
Query: 8 YCLKWNDFQAHVSGACHTLREEADFFDVVLGCDQSQGRTLQAHKVILAACSSFFKDILKQHEASTVSSHTSPFIYLRGVPFTHMAAILDFMYQGEVSVRQTDLSAFLAVAEDLQVKGLAQPGCDPIQPTP 137
+CL+WN+ Q+++ L F DV L +G+ L+AHK++L+ACS +F + H P + L+ VP++ M ++LDFMY+GEVSV Q L+AFL VAE L++KGL + D +P+P
Sbjct: 8 FCLRWNNHQSNLLSVFDQLLHAETFTDVTLAV---EGQHLKAHKMVLSACSPYFNTLFVSHP------EKHPIVILKDVPYSDMKSLLDFMYRGEVSVDQERLTAFLRVAESLRIKGLTEVNDD--KPSP 126
BLAST of longitudinals lacking vs. SwissProt
Match: gi|29428068|sp|Q9W0K7.2|BAB1_DROME (RecName: Full=Protein bric-a-brac 1) HSP 1 Score: 99.3673 bits (246), Expect = 6.056e-22 Identity = 46/120 (38.33%), Postives = 77/120 (64.17%), Query Frame = 0
Query: 7 NYCLKWNDFQAHVSGACHTLREEADFFDVVLGCDQSQGRTLQAHKVILAACSSFFKDILKQHEASTVSSHTSPFIYLRGVPFTHMAAILDFMYQGEVSVRQTDLSAFLAVAEDLQVKGLA 126
+CL+WN++Q +++ L + F DV L CD GR+++AHK++L+ACS +F+ +L A T H P + +R V ++ + AI++FMY+GE++V Q + L +AE L+V+GLA
Sbjct: 101 QFCLRWNNYQTNLTTIFDQLLQNECFVDVTLACD---GRSMKAHKMVLSACSPYFQTLL----AETPCQH--PIVIMRDVNWSDLKAIVEFMYRGEINVSQDQIGPLLRIAEMLKVRGLA 211
BLAST of longitudinals lacking vs. SwissProt
Match: gi|29428067|sp|Q9W0K4.2|BAB2_DROME (RecName: Full=Protein bric-a-brac 2) HSP 1 Score: 93.5893 bits (231), Expect = 5.821e-20 Identity = 40/120 (33.33%), Postives = 76/120 (63.33%), Query Frame = 0
Query: 8 YCLKWNDFQAHVSGACHTLREEADFFDVVLGCDQSQGRTLQAHKVILAACSSFFKDILKQHEASTVSSHTSPFIYLRGVPFTHMAAILDFMYQGEVSVRQTDLSAFLAVAEDLQVKGLAQ 127
+CL+WN++Q++++ L + F DV L C+ G +++AHK++L+ACS +F+ + + P I +R V ++ + A+++FMY+GE++V Q ++ L VAE L+++GLA+
Sbjct: 198 FCLRWNNYQSNLTNVFDELLQSESFVDVTLSCE---GHSIKAHKMVLSACSPYFQALFYDNPCQ------HPIIIMRDVSWSDLKALVEFMYKGEINVCQDQINPLLKVAETLKIRGLAE 308
BLAST of longitudinals lacking vs. SwissProt
Match: gi|73920873|sp|Q9V5M6.4|LOLA5_DROME (RecName: Full=Longitudinals lacking protein, isoforms J/P/Q/S/Z) HSP 1 Score: 91.2781 bits (225), Expect = 2.966e-19 Identity = 45/123 (36.59%), Postives = 72/123 (58.54%), Query Frame = 0
Query: 4 DLDNYCLKWNDFQAHVSGACHTLREEADFFDVVLGCDQSQGRTLQAHKVILAACSSFFKDILKQHEASTVSSHTSPFIYLRGVPFTHMAAILDFMYQGEVSVRQTDLSAFLAVAEDLQVKGLA 126
D +CL+WN+ Q+ + TL E D L ++G+ L+AHKV+L+ACS +F +L++ H P L+ V + + A++D+MY+GEV++ Q L+A L AE LQ+KGL+
Sbjct: 3 DDQQFCLRWNNHQSTLISVFDTLLENETLVDCTLA---AEGKFLKAHKVVLSACSPYFATLLQEQ----YDKH--PIFILKDVKYQELRAMMDYMYRGEVNISQDQLAALLKAAESLQIKGLS 116
BLAST of longitudinals lacking vs. nr
Match: gi|1325267190|ref|XP_023340336.1| (protein abrupt-like isoform X11 [Eurytemora affinis]) HSP 1 Score: 183.726 bits (465), Expect = 1.412e-52 Identity = 114/318 (35.85%), Postives = 168/318 (52.83%), Query Frame = 0
Query: 1 MGSDLDNYCLKWNDFQAHVSGACHTLREEADFFDVVLGCDQSQGRTLQAHKVILAACSSFFKDILKQHEASTVSSHTSPFIYLRGVPFTHMAAILDFMYQGEVSVRQTDLSAFLAVAEDLQVKGLAQPG-CDPIQPTPD----ELPAAASPLPNIKLEEPPSSPAN--------PLASTSDFQSVKVEPLIM-------DEAMEQIVEGNPEDFLYETVEETDTGSEDPLHRNDETTLSAAGSPSWTNGEVV----RLADGRG-GQCLRCGKGFALFVTAVRHFKLSHFESENLPCPYCQSVMRTKSYLKDHLRRKHK 293
MGS + +CL+WNDF++++S A LREE DFFDV L CD SQ LQAHKVIL+ACS FF++IL+++ H P +YL+GV + + ++L+FMY GEV+V Q +L++FL+VAE+L+VKGL Q D +P P + P A P + PP +P+ P+ S Q V V + D+ + E P+D+ YE E D GS DP +T+ A G+ + E V DG G C CG+ + H + H S C C +++TK+ L++H+ +H+
Sbjct: 1 MGSS-EKFCLRWNDFESNISVAFRELREEKDFFDVTLACDDSQ---LQAHKVILSACSPFFRNILRKN------PHQHPLLYLKGVKYKELVSVLNFMYMGEVNVAQEELNSFLSVAEELRVKGLTQNNSSDSAKPEPKSRSRDPPETAPPAKKNRPSVPPPTPSQDDDIQEVIPVKSEPRDQPVPVSQELNHGYQDTGDQGTVALQENYPDDYDYEGYEGYDEGSYDP------STMQATGADGNKDYERVIQEKMYRDGTGVWTCTDCGRSSKVKNNIYEHIEALHVNSRGYSCTICSRILKTKNTLRNHMNLQHR 302
BLAST of longitudinals lacking vs. nr
Match: gi|1325267197|ref|XP_023340349.1| (broad-complex core protein isoforms 1/2/3/4/5-like isoform X13 [Eurytemora affinis]) HSP 1 Score: 182.185 bits (461), Expect = 6.548e-52 Identity = 117/314 (37.26%), Postives = 168/314 (53.50%), Query Frame = 0
Query: 1 MGSDLDNYCLKWNDFQAHVSGACHTLREEADFFDVVLGCDQSQGRTLQAHKVILAACSSFFKDILKQHEASTVSSHTSPFIYLRGVPFTHMAAILDFMYQGEVSVRQTDLSAFLAVAEDLQVKGLAQPG-CDPIQPTPD----ELPAAASPLPNIKLEEPPSSPAN--------PLASTSDFQSVKVEPLIM-------DEAMEQIVEGNPEDFLYETVEETDTGSEDPLHRNDETTLSAAGSPSWTNGEVVRLADGRGG-QCLRCGKGFALFVTAVR-HFKLSHFESENLPCPYCQSVMRTKSYLKDHLRRKH 292
MGS + +CL+WNDF++++S A LREE DFFDV L CD SQ LQAHKVIL+ACS FF++IL+++ H P +YL+GV + + ++L+FMY GEV+V Q +L++FL+VAE+L+VKGL Q D +P P + P A P + PP +P+ P+ S Q V V + D+ + E P+D+ YE E D GS DP +T+ A G+ + +GG QC CG F+ + T +R H + H S+ CP C +TK+ L H +R H
Sbjct: 1 MGSS-EKFCLRWNDFESNISVAFRELREEKDFFDVTLACDDSQ---LQAHKVILSACSPFFRNILRKN------PHQHPLLYLKGVKYKELVSVLNFMYMGEVNVAQEELNSFLSVAEELRVKGLTQNNSSDSAKPEPKSRSRDPPETAPPAKKNRPSVPPPTPSQDDDIQEVIPVKSEPRDQPVPVSQELNHGYQDTGDQGTVALQENYPDDYDYEGYEGYDEGSYDP------STMQATGADGNKAALNRMMEKVQGGWQCSTCG-FFSTYSTNMRNHVEAKHVTSQGYICPECSKWFKTKNSLNVHKQRSH 297
BLAST of longitudinals lacking vs. nr
Match: gi|1325267162|ref|XP_023340263.1| (zinc finger and BTB domain-containing protein 14-like isoform X2 [Eurytemora affinis]) HSP 1 Score: 177.178 bits (448), Expect = 1.291e-49 Identity = 118/341 (34.60%), Postives = 173/341 (50.73%), Query Frame = 0
Query: 1 MGSDLDNYCLKWNDFQAHVSGACHTLREEADFFDVVLGCDQSQGRTLQAHKVILAACSSFFKDILKQHEASTVSSHTSPFIYLRGVPFTHMAAILDFMYQGEVSVRQTDLSAFLAVAEDLQVKGLAQPG-CDPIQPTPD----ELPAAASPLPNIKLEEPPSSPAN--------PLASTSDFQSVKVEPLIM-------DEAMEQIVEGNPEDFLYETVEETDTGSEDPLHRNDETTLSAAGSPS-------------------WTNGEVVRLADGRGGQ--CLRCGKGFALFVTAVRHFKLSHFESENLP------CPYCQSVMRTKSYLKDHLRRKHKV 294
MGS + +CL+WNDF++++S A LREE DFFDV L CD SQ LQAHKVIL+ACS FF++IL+++ H P +YL+GV + + ++L+FMY GEV+V Q +L++FL+VAE+L+VKGL Q D +P P + P A P + PP +P+ P+ S Q V V + D+ + E P+D+ YE E D GS DP +T+ A G+ W + R+ G GG C C +++ V++ LSH +S++LP C C + T S L+ H R+H +
Sbjct: 1 MGSS-EKFCLRWNDFESNISVAFRELREEKDFFDVTLACDDSQ---LQAHKVILSACSPFFRNILRKN------PHQHPLLYLKGVKYKELVSVLNFMYMGEVNVAQEELNSFLSVAEELRVKGLTQNNSSDSAKPEPKSRSRDPPETAPPAKKNRPSVPPPTPSQDDDIQEVIPVKSEPRDQPVPVSQELNHGYQDTGDQGTVALQENYPDDYDYEGYEGYDEGSYDP------STMQATGADGNKGRQGKEPIVGNGLEGMDWKQETMDRMRKGDGGNWFCCECN-----YMSKVKNLLLSHVQSQHLPGFPGYTCALCSAHSTTYSGLEKHTSRQHSI 320
BLAST of longitudinals lacking vs. nr
Match: gi|1325267178|ref|XP_023340303.1| (zinc finger and BTB domain-containing protein 14-like isoform X7 [Eurytemora affinis]) HSP 1 Score: 176.022 bits (445), Expect = 2.165e-49 Identity = 115/327 (35.17%), Postives = 165/327 (50.46%), Query Frame = 0
Query: 1 MGSDLDNYCLKWNDFQAHVSGACHTLREEADFFDVVLGCDQSQGRTLQAHKVILAACSSFFKDILKQHEASTVSSHTSPFIYLRGVPFTHMAAILDFMYQGEVSVRQTDLSAFLAVAEDLQVKGLAQPG-CDPIQPTPD----ELPAAASPLPNIKLEEPPSSPAN--------PLASTSDFQSVKVEPLIM-------DEAMEQIVEGNPEDFLYETVEETDTGSEDPLHRNDETTLSAAGSPSWTNGEVVRLADG--------------RGGQCLRCGKGFALFVTAVRHFKLSHFESENLPCPYCQSVMRTKSYLKDHLRRKHK 293
MGS + +CL+WNDF++++S A LREE DFFDV L CD SQ LQAHKVIL+ACS FF++IL+++ H P +YL+GV + + ++L+FMY GEV+V Q +L++FL+VAE+L+VKGL Q D +P P + P A P + PP +P+ P+ S Q V V + D+ + E P+D+ YE E D GS DP +T+ A G+ +G V + D G C CG L H + H + CP+C +K+ LK H+ R H+
Sbjct: 1 MGSS-EKFCLRWNDFESNISVAFRELREEKDFFDVTLACDDSQ---LQAHKVILSACSPFFRNILRKN------PHQHPLLYLKGVKYKELVSVLNFMYMGEVNVAQEELNSFLSVAEELRVKGLTQNNSSDSAKPEPKSRSRDPPETAPPAKKNRPSVPPPTPSQDDDIQEVIPVKSEPRDQPVPVSQELNHGYQDTGDQGTVALQENYPDDYDYEGYEGYDEGSYDP------STMQATGA----DGNKVCIVDNFANPGVEEHMQKTEAGWVCQACGWETRLKTRLWEHVEAKHVNTGGYTCPHCNKFCPSKNSLKAHVSRTHR 307
BLAST of longitudinals lacking vs. nr
Match: gi|1325267193|ref|XP_023340341.1| (broad-complex core protein isoforms 1/2/3/4/5-like isoform X12 [Eurytemora affinis]) HSP 1 Score: 174.481 bits (441), Expect = 5.238e-49 Identity = 114/314 (36.31%), Postives = 161/314 (51.27%), Query Frame = 0
Query: 1 MGSDLDNYCLKWNDFQAHVSGACHTLREEADFFDVVLGCDQSQGRTLQAHKVILAACSSFFKDILKQHEASTVSSHTSPFIYLRGVPFTHMAAILDFMYQGEVSVRQTDLSAFLAVAEDLQVKGLAQPG-CDPIQPTPD----ELPAAASPLPNIKLEEPPSSPAN--------PLASTSDFQSVKVEPLIM-------DEAMEQIVEGNPEDFLYETVEETDTGSEDPLHRNDETTLSAAGSPSWTNGEVVR-LADGRGGQCLRCGKGFALFVTAVRHFKLSHFESENLPCPYCQSVMRTKSYLKDHLRR-KH 292
MGS + +CL+WNDF++++S A LREE DFFDV L CD SQ LQAHKVIL+ACS FF++IL++ + H P +YL+GV + + ++L+FMY GEV+V Q +L++FL+VAE+L+VKGL Q D +P P + P A P + PP +P+ P+ S Q V V + D+ + E P+D+ YE E D GS DP + A G+ +VR G G C C H + +H SE CP C +T++ L +H R KH
Sbjct: 1 MGSS-EKFCLRWNDFESNISVAFRELREEKDFFDVTLACDDSQ---LQAHKVILSACSPFFRNILRK------NPHQHPLLYLKGVKYKELVSVLNFMYMGEVNVAQEELNSFLSVAEELRVKGLTQNNSSDSAKPEPKSRSRDPPETAPPAKKNRPSVPPPTPSQDDDIQEVIPVKSEPRDQPVPVSQELNHGYQDTGDQGTVALQENYPDDYDYEGYEGYDEGSYDP---STMQATGADGNKESIESMIVRGEPPGTGWHCTVCAYTSPYSTNVRNHVESNHLVSEGHYCPICAKFCKTRNALSNHRHRLKH 301
BLAST of longitudinals lacking vs. nr
Match: gi|1325267175|ref|XP_023340295.1| (zinc finger and BTB domain-containing protein 14-like isoform X6 [Eurytemora affinis]) HSP 1 Score: 170.629 bits (431), Expect = 2.358e-47 Identity = 114/324 (35.19%), Postives = 169/324 (52.16%), Query Frame = 0
Query: 1 MGSDLDNYCLKWNDFQAHVSGACHTLREEADFFDVVLGCDQSQGRTLQAHKVILAACSSFFKDILKQHEASTVSSHTSPFIYLRGVPFTHMAAILDFMYQGEVSVRQTDLSAFLAVAEDLQVKGLAQPG-CDPIQPTPD----ELPAAASPLPNIKLEEPPSSPAN--------PLASTSDFQSVKVEPLIM-------DEAMEQIVEGNPEDFLYETVEETDTGSEDPLHRNDETTLSAAGSPSWTNGEVV-----RLADGRGGQCLRCGKGFALFVTAVRHFKLSHFESENLP------CPYCQSVMRTKSYLKDHLRRKHK 293
MGS + +CL+WNDF++++S A LREE DFFDV L CD SQ LQAHKVIL+ACS FF++IL+++ H P +YL+GV + + ++L+FMY GEV+V Q +L++FL+VAE+L+VKGL Q D +P P + P A P + PP +P+ P+ S Q V V + D+ + E P+D+ YE E D GS DP +T+ A G+ N +++ R D RG C ++ + ++ H + ++LP CP C +KS L+ H R H+
Sbjct: 1 MGSS-EKFCLRWNDFESNISVAFRELREEKDFFDVTLACDDSQ---LQAHKVILSACSPFFRNILRKN------PHQHPLLYLKGVKYKELVSVLNFMYMGEVNVAQEELNSFLSVAEELRVKGLTQNNSSDSAKPEPKSRSRDPPETAPPAKKNRPSVPPPTPSQDDDIQEVIPVKSEPRDQPVPVSQELNHGYQDTGDQGTVALQENYPDDYDYEGYEGYDEGSYDP------STMQATGADG--NKDLIEEMLDRGLDERGTTIFICNS--CVYSSKKKYNVQEHIKVKHLPVQVLVTCPECLQTFHSKSSLRSHKWRFHR 304
BLAST of longitudinals lacking vs. nr
Match: gi|1325267184|ref|XP_023340319.1| (zinc finger and BTB domain-containing protein 14-like isoform X9 [Eurytemora affinis]) HSP 1 Score: 167.548 bits (423), Expect = 3.874e-46 Identity = 113/326 (34.66%), Postives = 164/326 (50.31%), Query Frame = 0
Query: 1 MGSDLDNYCLKWNDFQAHVSGACHTLREEADFFDVVLGCDQSQGRTLQAHKVILAACSSFFKDILKQHEASTVSSHTSPFIYLRGVPFTHMAAILDFMYQGEVSVRQTDLSAFLAVAEDLQVKGLAQPG-CDPIQPTPD----ELPAAASPLPNIKLEEPPSSPAN--------PLASTSDFQSVKVEPLIM-------DEAMEQIVEGNPEDFLYETVEETDTGSEDPLHRNDETTLSAAGSP----------SWTNGEVVRLAD-GRGGQCLRCGKGFALFVTAVRHFKLSHFESENLPCPYCQSVMRTKSYLKDHLRRKHKVY 295
MGS + +CL+WNDF++++S A LREE DFFDV L CD SQ LQAHKVIL+ACS FF++IL+++ H P +YL+GV + + ++L+FMY GEV+V Q +L++FL+VAE+L+VKGL Q D +P P + P A P + PP +P+ P+ S Q V V + D+ + E P+D+ YE E D GS DP +T+ A G+ S V+R D QC C V + H + H + C C ++ +T + + H + HK Y
Sbjct: 1 MGSS-EKFCLRWNDFESNISVAFRELREEKDFFDVTLACDDSQ---LQAHKVILSACSPFFRNILRKN------PHQHPLLYLKGVKYKELVSVLNFMYMGEVNVAQEELNSFLSVAEELRVKGLTQNNSSDSAKPEPKSRSRDPPETAPPAKKNRPSVPPPTPSQDDDIQEVIPVKSEPRDQPVPVSQELNHGYQDTGDQGTVALQENYPDDYDYEGYEGYDEGSYDP------STMQATGADGNKEFGDEMLSGMIRNVLRPDDKSYSYQCTTCLYTARKRVAVISHIQSVHLDFPGYTCHLCSTISKTLNAFQQHKLKCHKRY 310
BLAST of longitudinals lacking vs. nr
Match: gi|1325267181|ref|XP_023340311.1| (zinc finger and BTB domain-containing protein 14-like isoform X8 [Eurytemora affinis]) HSP 1 Score: 166.392 bits (420), Expect = 8.859e-46 Identity = 113/324 (34.88%), Postives = 166/324 (51.23%), Query Frame = 0
Query: 1 MGSDLDNYCLKWNDFQAHVSGACHTLREEADFFDVVLGCDQSQGRTLQAHKVILAACSSFFKDILKQHEASTVSSHTSPFIYLRGVPFTHMAAILDFMYQGEVSVRQTDLSAFLAVAEDLQVKGLAQPG-CDPIQPTPD----ELPAAASPLPNIKLEEPPSSPAN--------PLASTSDFQSVKVEPLIM-------DEAMEQIVEGNPEDFLYETVEETDTGSEDPLHRNDETTLSAAGSPSWTNGEVVRLADGRGGQCLRCGKGFAL----FVTAVRHFKLSHFESENLP-------CPYCQSVMRTKSYLKDHLRRKHK 293
MGS + +CL+WNDF++++S A LREE DFFDV L CD SQ LQAHKVIL+ACS FF++IL++ + H P +YL+GV + + ++L+FMY GEV+V Q +L++FL+VAE+L+VKGL Q D +P P + P A P + PP +P+ P+ S Q V V + D+ + E P+D+ YE E D GS DP +T+ A G+ + R D KGF+ F + RH H ES + C YC + +++ L H+ ++H+
Sbjct: 1 MGSS-EKFCLRWNDFESNISVAFRELREEKDFFDVTLACDDSQ---LQAHKVILSACSPFFRNILRK------NPHQHPLLYLKGVKYKELVSVLNFMYMGEVNVAQEELNSFLSVAEELRVKGLTQNNSSDSAKPEPKSRSRDPPETAPPAKKNRPSVPPPTPSQDDDIQEVIPVKSEPRDQPVPVSQELNHGYQDTGDQGTVALQENYPDDYDYEGYEGYDEGSYDP------STMQATGADGNKDLIEEREKDITENIFKDPMKGFSCRLCNFNGSSRHKVFCHIESRHFKDNPLIYTCVYCSRQVNSRNALGVHMSKEHR 308
BLAST of longitudinals lacking vs. nr
Match: gi|1325267165|ref|XP_023340271.1| (zinc finger protein 131-like isoform X3 [Eurytemora affinis]) HSP 1 Score: 165.236 bits (417), Expect = 4.154e-45 Identity = 112/318 (35.22%), Postives = 167/318 (52.52%), Query Frame = 0
Query: 1 MGSDLDNYCLKWNDFQAHVSGACHTLREEADFFDVVLGCDQSQGRTLQAHKVILAACSSFFKDILKQHEASTVSSHTSPFIYLRGVPFTHMAAILDFMYQGEVSVRQTDLSAFLAVAEDLQVKGLAQPG-CDPIQPTPD----ELPAAASPLPNIKLEEPPSSPAN--------PLASTSDFQSVKVEPLIM-------DEAMEQIVEGNPEDFLYETVEETDTGSEDPLHRNDETTLSAAGSPSWTNGEVVRLADGRG-GQ-----CLRCGKGFALFVTAVRHFKLSHFESENLPCPYCQSVMRTKSYLKDHLRRKH 292
MGS + +CL+WNDF++++S A LREE DFFDV L CD SQ LQAHKVIL+ACS FF++IL++ + H P +YL+GV + + ++L+FMY GEV+V Q +L++FL+VAE+L+VKGL Q D +P P + P A P + PP +P+ P+ S Q V V + D+ + E P+D+ YE E D GS DP + A G+ ++T + ++ + G GQ C C ++H + H + L C +C + R + + HLR+KH
Sbjct: 1 MGSS-EKFCLRWNDFESNISVAFRELREEKDFFDVTLACDDSQ---LQAHKVILSACSPFFRNILRK------NPHQHPLLYLKGVKYKELVSVLNFMYMGEVNVAQEELNSFLSVAEELRVKGLTQNNSSDSAKPEPKSRSRDPPETAPPAKKNRPSVPPPTPSQDDDIQEVIPVKSEPRDQPVPVSQELNHGYQDTGDQGTVALQENYPDDYDYEGYEGYDEGSYDP---STMQATGADGNKAFTETILDKMYESIGEGQKKVWNCALCPYSREKKDHVMKHVEARHCNLQ-LSC-FCGLMFRRRDVYRQHLRKKH 303
BLAST of longitudinals lacking vs. nr
Match: gi|1325267168|ref|XP_023340278.1| (zinc finger protein 131-like isoform X4 [Eurytemora affinis]) HSP 1 Score: 162.925 bits (411), Expect = 3.098e-44 Identity = 109/318 (34.28%), Postives = 165/318 (51.89%), Query Frame = 0
Query: 1 MGSDLDNYCLKWNDFQAHVSGACHTLREEADFFDVVLGCDQSQGRTLQAHKVILAACSSFFKDILKQHEASTVSSHTSPFIYLRGVPFTHMAAILDFMYQGEVSVRQTDLSAFLAVAEDLQVKGLAQPG-CDPIQPTPD----ELPAAASPLPNIKLEEPPSSPAN--------PLASTSDFQSVKVEPLIM-------DEAMEQIVEGNPEDFLYETVEETDTGSEDPLHRNDETTLSAAGSPSWT--NGEV-VRLAD-GRGGQCLRCGKGFALFVTAVRHFKLSHFESENL-PCPYCQSVMRTKSYLKDHLRRKHK 293
MGS + +CL+WNDF++++S A LREE DFFDV L CD SQ LQAHKVIL+ACS FF++IL++ + H P +YL+GV + + ++L+FMY GEV+V Q +L++FL+VAE+L+VKGL Q D +P P + P A P + PP +P+ P+ S Q V V + D+ + E P+D+ YE E D GS DP +T+ A G+ + EV ++A+ G+G + + H ++ H + + C C R+++ H+ HK
Sbjct: 1 MGSS-EKFCLRWNDFESNISVAFRELREEKDFFDVTLACDDSQ---LQAHKVILSACSPFFRNILRK------NPHQHPLLYLKGVKYKELVSVLNFMYMGEVNVAQEELNSFLSVAEELRVKGLTQNNSSDSAKPEPKSRSRDPPETAPPAKKNRPSVPPPTPSQDDDIQEVIPVKSEPRDQPVPVSQELNHGYQDTGDQGTVALQENYPDDYDYEGYEGYDEGSYDP------STMQATGADGNKDFDAEVRAKMANVGQGRWMCQVCDYVSKSTNVYNHVEVKHMTEQMVYSCTVCPKTYRSRNSFNVHMSMTHK 302 The following BLAST results are available for this feature:
BLAST of longitudinals lacking vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 25
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BLAST of longitudinals lacking vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of longitudinals lacking vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold691_size110934:19119..20363- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold691_size110934-snap-gene-0.34 ID=maker-scaffold691_size110934-snap-gene-0.34|Name=longitudinals lacking|organism=Tigriopus kingsejongensis|type=gene|length=1245bp|location=Sequence derived from alignment at scaffold691_size110934:19119..20363- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'longitudinals lacking' has the following synonyms
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