longitudinals lacking, maker-scaffold691_size110934-snap-gene-0.34 (gene) Tigriopus kingsejongensis

Overview
Namelongitudinals lacking
Unique Namemaker-scaffold691_size110934-snap-gene-0.34
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
[Close]
BLAST of longitudinals lacking vs. L. salmonis genes
Match: EMLSAG00000007228 (supercontig:LSalAtl2s:LSalAtl2s404:613982:614914:-1 gene:EMLSAG00000007228 transcript:EMLSAT00000007228 description:"augustus-LSalAtl2s404-processed-gene-6.4")

HSP 1 Score: 98.2117 bits (243), Expect = 4.113e-24
Identity = 80/290 (27.59%), Postives = 134/290 (46.21%), Query Frame = 0 
Query:   10 LKWNDFQAHVSGACHTLREEADFFDVVLGCDQSQGRTLQAHKVILAACSSFFKDILKQHEASTVSSHTSPFIYLRGVPFTHMAAILDFMYQGEVSVRQTDLSAFLAVAEDLQVKGL---AQPGCDPIQPTPD---ELPAAASPLPNIKLEEPPSSPANPLASTSDFQSVKVEPLIMDEAMEQIVEGNPEDFLYETVEETDTGSEDPLHRNDETTLSAAGSPSWTNGEVVRLADGRGGQCLRCGKGFALFVTAVR-HFKLSHFESENLPCPYCQSVMRTKSYLKDHLRRKH 292
            LKWN F ++   +   L E  + FDV L    +  R ++AHK +L ACS  F+ I+K     +    T P+IYL+G+   H+  ++ F+Y GEV V Q +L  F+A+A++ ++K L     P      PTP    +LP  +S + N+  +    SP  P A    + +    P  M++     +  N     +ET+E   T ++D     ++  + A       N    +   G+  QC +C      +  A+R H + +H  S+ + C  C    +T+  L +H  R H
Sbjct:    9 LKWNSFDSNFKESLSDLYENEELFDVTLI---TGSRQIKAHKFVLCACSPVFRSIIK-----SAPPQTHPWIYLKGINVDHLELLISFLYHGEVKVIQEELDDFIAIAKEFEIKCLNTEKMPTSLNDSPTPSPPRDLPDLSS-VDNVSDDLLSISP--PTAQIEKYYT----PYEMNDLY---IAQNISPDKFETME---TNNKDIKLDKNKKHIRALDLE--INRYYTKQRTGKKFQCKKCS-YLTPYGNAIRNHVESNHISSKGVVCTLCSKKFKTRLSLHNHCYRVH 274
[Close]
BLAST of longitudinals lacking vs. L. salmonis genes
Match: EMLSAG00000002455 (supercontig:LSalAtl2s:LSalAtl2s1471:52173:56863:1 gene:EMLSAG00000002455 transcript:EMLSAT00000002455 description:"maker-LSalAtl2s1471-snap-gene-0.12")

HSP 1 Score: 100.908 bits (250), Expect = 4.995e-24
Identity = 51/120 (42.50%), Postives = 76/120 (63.33%), Query Frame = 0 
Query:    8 YCLKWNDFQAHVSGACHTLREEADFFDVVLGCDQSQGRTLQAHKVILAACSSFFKDILKQHEASTVSSHTSPFIYLRGVPFTHMAAILDFMYQGEVSVRQTDLSAFLAVAEDLQVKGLAQ 127
            YCL+WN+ Q ++      L     F DV L     +G  L+AHK++L+ACS +F+ +L     +T   H  P ++LR V ++ M A+L+FMY+GEVSV Q +LS+ L VAE L++KGLA+
Sbjct:   10 YCLRWNNHQHNLLSVFEDLLNHEAFVDVTLAV---EGLQLKAHKMVLSACSPYFQSML----YNTPDRH--PIVFLRDVRYSEMKALLEFMYRGEVSVDQENLSSLLKVAEGLKIKGLAE 120
[Close]
BLAST of longitudinals lacking vs. L. salmonis genes
Match: EMLSAG00000009238 (supercontig:LSalAtl2s:LSalAtl2s588:466746:467909:-1 gene:EMLSAG00000009238 transcript:EMLSAT00000009238 description:"snap_masked-LSalAtl2s588-processed-gene-4.20")

HSP 1 Score: 97.8265 bits (242), Expect = 1.962e-23
Identity = 99/351 (28.21%), Postives = 151/351 (43.02%), Query Frame = 0 
Query:    7 NYCLKWNDFQAHVSGACHTLREEADFFDVVL--GC--DQSQGRTLQAHKVILAACSSFFKDILKQHEASTVSS-HTSPFIYLRGVPFTHMAAILDFMYQGEVSVRQTDLSAFLAVAEDLQVKGLAQ-----PGCDPI-------------------------QPTPDELPAAASPLPNI------KLEEPPSSPANPLASTSDFQ---SVKVEPLIMDE--------AMEQIVE--GNPEDFLYETVEETDTGSEDPLHRNDETTLSAAGSPSWTNGEVVRLADGRGGQCLRCGKGFALFVTAVRHFKLSHFESEN--LPCPYCQSVMRTKSYLKDHLRRKHKVYQGPFKG 301
            NYCL+ ND++   + +  +LR++  F DV L  GC  +     + +AH+VIL+ACSS+F  +L +    T+S  H  P + L  V    + A+LDFMY G+V++    LS+FLAVA+ L++KGL +     P  DP+                         Q    + P   +  P I        EE PSS      S++D +   S+   P +++         AM  I +    P+D L  T  E  + S     RN+  T                        C  C K F   ++  RH K  HF++EN  + CP C     +++ L  HL R H V +   +G
Sbjct:   19 NYCLRLNDYEKKYAESFRSLRDDESFADVTLVAGCSSEDDSSTSFKAHRVILSACSSYFHSLLIK----TLSPWHVHPVLLLTDVRPRDLHALLDFMYLGQVNINNEALSSFLAVAQRLRIKGLCETTFQIPKKDPVYVATGHGKRAKFMTTTTSSVLRSTTQQIIQQHPHKTTDAPIILATSAANQEEVPSSAVTEFISSNDGEFIPSLPSHPFMINTDPTTPTPAAMVTIEDKMNEPQD-LTPTHTEVISPSTPKKDRNNRKT------------------------CGYCHKDFHE-MSLKRHIKDVHFKNENTFVICPQCCKQYASQNSLYSHLNRVHGVKKEMMEG 339
[Close]
BLAST of longitudinals lacking vs. L. salmonis genes
Match: EMLSAG00000003189 (supercontig:LSalAtl2s:LSalAtl2s176:671224:672666:1 gene:EMLSAG00000003189 transcript:EMLSAT00000003189 description:"augustus-LSalAtl2s176-processed-gene-6.4")

HSP 1 Score: 94.3597 bits (233), Expect = 1.374e-22
Identity = 84/330 (25.45%), Postives = 132/330 (40.00%), Query Frame = 0 
Query:    6 DNYCLKWNDFQAHVSGACHTLREEADFFDVVLGCDQSQGRTLQAHKVILAACSSFFKDILKQHEASTVSSHTSPFIYLRGVPFTHMAAILDFMYQGEVSVRQTDLSAFLAVAEDLQVKGLAQ--------PGCDPIQPTPDELPAAASPLPNIKLEEPPSSPANPLASTSDFQSVKVEPLIMDEAMEQIVEGNPEDFLYETVEETDTGSEDPLHRNDETTLS---AAGSPSWTNGEVVRLADG-----------------------------RGGQCLRCGKGFALF--VTAVRHFKLSHFESENLPCPYCQSVMRTKSYLKDHLRRKHK 293
            +N C+KWN++++++      L    + FDV L    S  R ++AHKVIL+ACS  F+ I++     +VS H  P IYL+ + F H+  IL F+Y GE+ V   +++  L VA+  Q+KGL           G D    +  +L ++ +     K  +  S   NP     D           + ++    E   E FLY      +    D +  N +  +S   A  S  + N    R A+G                             +G +C +C   F  F      RH +  H  ++   C  C    +T   LK H    HK
Sbjct:    5 ENLCIKWNEYESNLKEGLSELLHNEELFDVTL---ISGSRVIKAHKVILSACSPVFRSIIQ-----SVSFHPHPVIYLKDINFDHLELILSFLYYGEMRVASDEINDLLCVADVFQIKGLYNNTITSATINGEDIFIQSNSDLYSSIN-----KSFQHQSCNTNPNKECQDI-------FAPNSSLNTKRENPDESFLYSLESSYNPDLVDGVQSNCDGDVSYDMANSSSRYLNNACGREAEGANISTKDDNEKYHQSLKPEIKKHFKKSINKGFECKKC--KFTTFDRTCINRHIEYRHMITKGFCCHVCNKNYKTICTLKRHNTHFHK 312
[Close]
BLAST of longitudinals lacking vs. L. salmonis genes
Match: EMLSAG00000007481 (supercontig:LSalAtl2s:LSalAtl2s42:537429:544881:1 gene:EMLSAG00000007481 transcript:EMLSAT00000007481 description:"maker-LSalAtl2s42-augustus-gene-5.9")

HSP 1 Score: 96.2857 bits (238), Expect = 1.411e-22
Identity = 47/127 (37.01%), Postives = 80/127 (62.99%), Query Frame = 0 
Query:    1 MGSDLDNYCLKWNDFQAHVSGACHTLREEADFFDVVLGCDQSQGRTLQAHKVILAACSSFFKDILKQHEASTVSSHTSPFIYLRGVPFTHMAAILDFMYQGEVSVRQTDLSAFLAVAEDLQVKGLAQ 127
            MG++   +CLKWN+ ++ +     TL EE    DV L    ++G+ L+AHKVIL+ACS +F+ + +       ++   P IY++ V F ++ A++++MY+GE +V Q  L +F+  AE LQ++GLA+
Sbjct:    1 MGTE-QQFCLKWNNHRSTILSVFDTLLEEESLVDVTL---TAEGQFLRAHKVILSACSPYFRIMFR------AANEKHPVIYMQNVDFENLKALVEYMYKGEANVPQHMLPSFIRTAESLQIRGLAE 117
[Close]
BLAST of longitudinals lacking vs. SwissProt
Match: gi|73621174|sp|Q7KRI2.1|LOLAL_DROME (RecName: Full=Longitudinals lacking protein-like; Short=Lola-like protein; AltName: Full=Protein Batman)

HSP 1 Score: 108.997 bits (271), Expect = 2.365e-28
Identity = 59/127 (46.46%), Postives = 83/127 (65.35%), Query Frame = 0 
Query:    1 MGSDLDNYCLKWNDFQAHVSGACHTLREEADFFDVVLGCDQSQGRTLQAHKVILAACSSFFKDILKQHEASTVSSHTSPFIYLRGVPFTHMAAILDFMYQGEVSVRQTDLSAFLAVAEDLQVKGLAQ 127
            M SD   + LKWNDFQ ++  +   LR+E  F DV L C+   G+T +AHK++L+ACS +FK +L+++     S H  P I L+ V + H+ AIL+FMY GEV+V Q  L AFL  A+ L+VKGLA+
Sbjct:    2 MSSD-QQFFLKWNDFQTNMVTSFRHLRDEKSFTDVTLACE---GQTCKAHKMVLSACSPYFKALLEENP----SKH--PIIILKDVSYIHLQAILEFMYAGEVNVSQEQLPAFLKTADRLKVKGLAE 118
[Close]
BLAST of longitudinals lacking vs. SwissProt
Match: gi|13124701|sp|Q01295.2|BRC1_DROME (RecName: Full=Broad-complex core protein isoforms 1/2/3/4/5)

HSP 1 Score: 110.153 bits (274), Expect = 1.171e-25
Identity = 52/124 (41.94%), Postives = 82/124 (66.13%), Query Frame = 0 
Query:    4 DLDNYCLKWNDFQAHVSGACHTLREEADFFDVVLGCDQSQGRTLQAHKVILAACSSFFKDILKQHEASTVSSHTSPFIYLRGVPFTHMAAILDFMYQGEVSVRQTDLSAFLAVAEDLQVKGLAQ 127
            D  ++CL+WN++Q+ ++ A   LR++  F DV L C   +GR+++AH+V+L+ACS +F+++LK    ST   H  P I L+ V F  + A+++F+Y GEV+V Q  L +FL  AE L+V GL Q
Sbjct:    3 DTQHFCLRWNNYQSSITSAFENLRDDEAFVDVTLAC---EGRSIKAHRVVLSACSPYFRELLK----STPCKH--PVILLQDVNFMDLHALVEFIYHGEVNVHQKSLQSFLKTAEVLRVSGLTQ 117
[Close]
BLAST of longitudinals lacking vs. SwissProt
Match: gi|13123979|sp|Q24206.2|BRC4_DROME (RecName: Full=Broad-complex core protein isoform 6)

HSP 1 Score: 110.153 bits (274), Expect = 1.382e-25
Identity = 52/124 (41.94%), Postives = 82/124 (66.13%), Query Frame = 0 
Query:    4 DLDNYCLKWNDFQAHVSGACHTLREEADFFDVVLGCDQSQGRTLQAHKVILAACSSFFKDILKQHEASTVSSHTSPFIYLRGVPFTHMAAILDFMYQGEVSVRQTDLSAFLAVAEDLQVKGLAQ 127
            D  ++CL+WN++Q+ ++ A   LR++  F DV L C+   GR+++AH+V+L+ACS +F+++LK    ST   H  P I L+ V F  + A+++F+Y GEV+V Q  L +FL  AE L+V GL Q
Sbjct:    3 DTQHFCLRWNNYQSSITSAFENLRDDEAFVDVTLACE---GRSIKAHRVVLSACSPYFRELLK----STPCKH--PVILLQDVNFMDLHALVEFIYHGEVNVHQKSLQSFLKTAEVLRVSGLTQ 117
[Close]
BLAST of longitudinals lacking vs. SwissProt
Match: gi|33112291|sp|Q8IN81.1|FRU_DROME (RecName: Full=Sex determination protein fruitless)

HSP 1 Score: 104.76 bits (260), Expect = 8.298e-24
Identity = 58/181 (32.04%), Postives = 93/181 (51.38%), Query Frame = 0 
Query:    8 YCLKWNDFQAHVSGACHTLREEADFFDVVLGCDQSQGRTLQAHKVILAACSSFFKDILKQHEASTVSSHTSPFIYLRGVPFTHMAAILDFMYQGEVSVRQTDLSAFLAVAEDLQVKGLA-------QPGCDPIQPTPDELPAAASPLPNIKLEEPPSSPANPLASTSDFQSVKVEPLIMDE 181
            +CL+WN+   +++G   +L +     DV L C   +G T++AH+ IL+ACS +F+ I  Q++      H  P IYL+ V ++ M ++LDFMY+GEV+V Q+ L  FL  AE LQV+GL        +  CD ++ +    P    P             A+ +  + D    + E  + DE
Sbjct:  106 FCLRWNNHPTNLTGVLTSLLQREALCDVTLAC---EGETVKAHQTILSACSPYFETIFLQNQ------HPHPIIYLKDVRYSEMRSLLDFMYKGEVNVGQSSLPMFLKTAESLQVRGLTDNNNLNYRSDCDKLRDSAASSPTGRGPSNYTGGLGGAGGVADAMRESRDSLRSRCERDLRDE 277
[Close]
BLAST of longitudinals lacking vs. SwissProt
Match: gi|47117851|sp|P42282.3|TTKA_DROME (RecName: Full=Protein tramtrack, alpha isoform; AltName: Full=Repressor protein fushi tarazu; AltName: Full=Tramtrack p88)

HSP 1 Score: 101.679 bits (252), Expect = 1.048e-22
Identity = 51/130 (39.23%), Postives = 78/130 (60.00%), Query Frame = 0 
Query:    8 YCLKWNDFQAHVSGACHTLREEADFFDVVLGCDQSQGRTLQAHKVILAACSSFFKDILKQHEASTVSSHTSPFIYLRGVPFTHMAAILDFMYQGEVSVRQTDLSAFLAVAEDLQVKGLAQPGCDPIQPTP 137
            +CL+WN+ Q+++      L     F DV L     +G+ L+AHK++L+ACS +F  +   H          P + L+ VP++ M ++LDFMY+GEVSV Q  L+AFL VAE L++KGL +   D  +P+P
Sbjct:    8 FCLRWNNHQSNLLSVFDQLLHAETFTDVTLAV---EGQHLKAHKMVLSACSPYFNTLFVSH------PEKHPIVILKDVPYSDMKSLLDFMYRGEVSVDQERLTAFLRVAESLRIKGLTEVNDD--KPSP 126
[Close]
BLAST of longitudinals lacking vs. SwissProt
Match: gi|27923726|sp|Q24174.2|ABRU_DROME (RecName: Full=Protein abrupt; AltName: Full=Protein clueless)

HSP 1 Score: 101.293 bits (251), Expect = 1.253e-22
Identity = 51/119 (42.86%), Postives = 69/119 (57.98%), Query Frame = 0 
Query:    8 YCLKWNDFQAHVSGACHTLREEADFFDVVLGCDQSQGRTLQAHKVILAACSSFFKDILKQHEASTVSSHTSPFIYLRGVPFTHMAAILDFMYQGEVSVRQTDLSAFLAVAEDLQVKGLA 126
            Y LKWNDFQ+ +  +   LR+E DF DV L CD+   R+  AHKV+L+ACS +F+ +LK +          P + LR V    +  +L FMY GEV+V    L  FL  A  LQ++GLA
Sbjct:   78 YALKWNDFQSSILSSFRHLRDEEDFVDVTLACDE---RSFTAHKVVLSACSPYFRRLLKANPCE------HPIVILRDVRCDDVENLLSFMYNGEVNVSHEQLPDFLKTAHLLQIRGLA 187
[Close]
BLAST of longitudinals lacking vs. SwissProt
Match: gi|20455517|sp|P17789.2|TTKB_DROME (RecName: Full=Protein tramtrack, beta isoform; AltName: Full=Repressor protein fushi tarazu; AltName: Full=Tramtrack p69)

HSP 1 Score: 101.293 bits (251), Expect = 1.285e-22
Identity = 51/130 (39.23%), Postives = 78/130 (60.00%), Query Frame = 0 
Query:    8 YCLKWNDFQAHVSGACHTLREEADFFDVVLGCDQSQGRTLQAHKVILAACSSFFKDILKQHEASTVSSHTSPFIYLRGVPFTHMAAILDFMYQGEVSVRQTDLSAFLAVAEDLQVKGLAQPGCDPIQPTP 137
            +CL+WN+ Q+++      L     F DV L     +G+ L+AHK++L+ACS +F  +   H          P + L+ VP++ M ++LDFMY+GEVSV Q  L+AFL VAE L++KGL +   D  +P+P
Sbjct:    8 FCLRWNNHQSNLLSVFDQLLHAETFTDVTLAV---EGQHLKAHKMVLSACSPYFNTLFVSHP------EKHPIVILKDVPYSDMKSLLDFMYRGEVSVDQERLTAFLRVAESLRIKGLTEVNDD--KPSP 126
[Close]
BLAST of longitudinals lacking vs. SwissProt
Match: gi|29428068|sp|Q9W0K7.2|BAB1_DROME (RecName: Full=Protein bric-a-brac 1)

HSP 1 Score: 99.3673 bits (246), Expect = 6.056e-22
Identity = 46/120 (38.33%), Postives = 77/120 (64.17%), Query Frame = 0 
Query:    7 NYCLKWNDFQAHVSGACHTLREEADFFDVVLGCDQSQGRTLQAHKVILAACSSFFKDILKQHEASTVSSHTSPFIYLRGVPFTHMAAILDFMYQGEVSVRQTDLSAFLAVAEDLQVKGLA 126
             +CL+WN++Q +++     L +   F DV L CD   GR+++AHK++L+ACS +F+ +L    A T   H  P + +R V ++ + AI++FMY+GE++V Q  +   L +AE L+V+GLA
Sbjct:  101 QFCLRWNNYQTNLTTIFDQLLQNECFVDVTLACD---GRSMKAHKMVLSACSPYFQTLL----AETPCQH--PIVIMRDVNWSDLKAIVEFMYRGEINVSQDQIGPLLRIAEMLKVRGLA 211
[Close]
BLAST of longitudinals lacking vs. SwissProt
Match: gi|29428067|sp|Q9W0K4.2|BAB2_DROME (RecName: Full=Protein bric-a-brac 2)

HSP 1 Score: 93.5893 bits (231), Expect = 5.821e-20
Identity = 40/120 (33.33%), Postives = 76/120 (63.33%), Query Frame = 0 
Query:    8 YCLKWNDFQAHVSGACHTLREEADFFDVVLGCDQSQGRTLQAHKVILAACSSFFKDILKQHEASTVSSHTSPFIYLRGVPFTHMAAILDFMYQGEVSVRQTDLSAFLAVAEDLQVKGLAQ 127
            +CL+WN++Q++++     L +   F DV L C+   G +++AHK++L+ACS +F+ +   +          P I +R V ++ + A+++FMY+GE++V Q  ++  L VAE L+++GLA+
Sbjct:  198 FCLRWNNYQSNLTNVFDELLQSESFVDVTLSCE---GHSIKAHKMVLSACSPYFQALFYDNPCQ------HPIIIMRDVSWSDLKALVEFMYKGEINVCQDQINPLLKVAETLKIRGLAE 308
[Close]
BLAST of longitudinals lacking vs. SwissProt
Match: gi|73920873|sp|Q9V5M6.4|LOLA5_DROME (RecName: Full=Longitudinals lacking protein, isoforms J/P/Q/S/Z)

HSP 1 Score: 91.2781 bits (225), Expect = 2.966e-19
Identity = 45/123 (36.59%), Postives = 72/123 (58.54%), Query Frame = 0 
Query:    4 DLDNYCLKWNDFQAHVSGACHTLREEADFFDVVLGCDQSQGRTLQAHKVILAACSSFFKDILKQHEASTVSSHTSPFIYLRGVPFTHMAAILDFMYQGEVSVRQTDLSAFLAVAEDLQVKGLA 126
            D   +CL+WN+ Q+ +     TL E     D  L    ++G+ L+AHKV+L+ACS +F  +L++        H  P   L+ V +  + A++D+MY+GEV++ Q  L+A L  AE LQ+KGL+
Sbjct:    3 DDQQFCLRWNNHQSTLISVFDTLLENETLVDCTLA---AEGKFLKAHKVVLSACSPYFATLLQEQ----YDKH--PIFILKDVKYQELRAMMDYMYRGEVNISQDQLAALLKAAESLQIKGLS 116
[Close]
BLAST of longitudinals lacking vs. nr
Match: gi|1325315087|ref|XP_023339236.1| (protein tramtrack, beta isoform-like isoform X14 [Eurytemora affinis])

HSP 1 Score: 162.155 bits (409), Expect = 6.736e-44
Identity = 106/325 (32.62%), Postives = 155/325 (47.69%), Query Frame = 0 
Query:    6 DNYCLKWNDFQAHVSGACHTLREEADFFDVVLGCDQSQGRTLQAHKVILAACSSFFKDILKQHEASTVSSHTSPFIYLRGVPFTHMAAILDFMYQGEVSVRQTDLSAFLAVAEDLQVKGLAQPGCDPIQPTPDELPAAASPLPNIKLEEPPSSPANPLASTSDFQSVKVEPLIMDEAMEQI--VEGNPEDF---------LYE---------TVEETDTGSE----------DPLHRNDETTLSAAGSPSWTNGEVVRLADGRGGQ--CLRCGKGFALFVTAVRHFKLSHF--ESENLPCPYCQSVMRTKSYLKDHLRRKHKVYQ 296
            + +CLKWNDF++++S A   +R+E DFFDV L CD  Q   LQAHKVIL+ACS FF++ILK++       H  P +YL+GV ++ + ++L+FMY GEV+V Q +L++FLAVAE+L+VKGL Q   +  Q      P + SP P      P    + P                 D+ ++++  V+  P D          +Y+           EE D G +          D  +       S AG        +    D   G   C+ CGKGF +   A RH +  H+        CP C      +    DH+RR H+VY+
Sbjct:    4 EKFCLKWNDFESNISLAFREIRDEKDFFDVTLACDDDQ---LQAHKVILSACSPFFRNILKRN------PHQHPLLYLKGVKYSDLQSVLNFMYHGEVNVAQDELNSFLAVAEELRVKGLTQN--NGSQSAKGREPVSKSPPPIKSNARPSERDSGPPPKRPRPTPPTQITPPDDDDIQEVVPVKSEPRDSSAVISTPGDMYQPSSNQQSLALTEEDDYGQDESYDDYGQYGDGSYDGQMMDPSMAGGADGNKDLMYDKLDLSSGYPVCMVCGKGFTILTNARRHVRTMHYGQGQGQFECPTCGKGFGKQRSYDDHMRRVHRVYK 317
[Close]
BLAST of longitudinals lacking vs. nr
Match: gi|1325267171|ref|XP_023340287.1| (zinc finger protein 131-like isoform X5 [Eurytemora affinis])

HSP 1 Score: 161.77 bits (408), Expect = 8.489e-44
Identity = 116/335 (34.63%), Postives = 170/335 (50.75%), Query Frame = 0 
Query:    1 MGSDLDNYCLKWNDFQAHVSGACHTLREEADFFDVVLGCDQSQGRTLQAHKVILAACSSFFKDILKQHEASTVSSHTSPFIYLRGVPFTHMAAILDFMYQGEVSVRQTDLSAFLAVAEDLQVKGLAQPG-CDPIQPTPD----ELPAAASPLPNIKLEEPPSSPAN--------PLASTSDFQSVKVEPLIM-------DEAMEQIVEGNPEDFLYETVEETDTGSEDPLHRNDETTLSAAGSP--------------SWTNGEVVR---LADGRGGQCLRCGKGFALFVTAV-RHFKLSHFESENLPCPYCQSVMRTKSYL---KDHLRRKHKV 294
            MGS  + +CL+WNDF++++S A   LREE DFFDV L CD SQ   LQAHKVIL+ACS FF++IL++      + H  P +YL+GV +  + ++L+FMY GEV+V Q +L++FL+VAE+L+VKGL Q    D  +P P     + P  A P    +   PP +P+         P+ S    Q V V   +        D+    + E  P+D+ YE  E  D GS DP      +T+ A G+               ++ +  VVR     DG    C  C   F+  +  V +H + SH    +  C  C  +  +++ L   +    RKHKV
Sbjct:    1 MGSS-EKFCLRWNDFESNISVAFRELREEKDFFDVTLACDDSQ---LQAHKVILSACSPFFRNILRK------NPHQHPLLYLKGVKYKELVSVLNFMYMGEVNVAQEELNSFLSVAEELRVKGLTQNNSSDSAKPEPKSRSRDPPETAPPAKKNRPSVPPPTPSQDDDIQEVIPVKSEPRDQPVPVSQELNHGYQDTGDQGTVALQENYPDDYDYEGYEGYDEGSYDP------STMQATGADGNKGDDHDGPMVGGNYESDAVVRSKISKDGASYWCTDC--NFSGSINEVYKHIEKSHVHV-SFSCNLCGRLCNSRNGLLVHRSRFHRKHKV 316
[Close]
BLAST of longitudinals lacking vs. nr
Match: gi|1325315185|ref|XP_023339289.1| (broad-complex core protein isoforms 1/2/3/4/5-like isoform X15 [Eurytemora affinis])

HSP 1 Score: 161.384 bits (407), Expect = 8.568e-44
Identity = 114/333 (34.23%), Postives = 163/333 (48.95%), Query Frame = 0 
Query:    1 MGSDLDNYCLKWNDFQAHVSGACHTLREEADFFDVVLGCDQSQGRTLQAHKVILAACSSFFKDILKQHEASTVSSHTSPFIYLRGVPFTHMAAILDFMYQGEVSVRQTDLSAFLAVAEDLQVKGLAQPGCDPIQPTPDELPAAASPLPNIKLEEPPSSPAN---------------------PLAST-SDFQSVKVEPLIMDEAM-----------EQIVEGNPEDFLYETVEET-DTGSEDPLHRNDETTLSAAGSPSWT------NGEVVRLADGRGGQCLRCGKGFALFVTAVRHFKLSHFESENLPCPYCQSVMRTKSYLKDHLRRKHK 293
            MG++   +CLKWNDF++++S A   +R+E DFFDV L CD  Q   LQAHKVIL+ACS FF++ILK+      + H  P +YL+GV ++ + ++L+FMY GEV+V Q +L++FLAVAE+L+VKGL Q        T  E  A  SP    +  E  +                         P+ S   D  SV  +P   + A+           E   E N ED  YE  +++ D+   DP        ++  G+          N E +    G G  C +CGK       A  H +  HF S+   CP C   M+TK+ L +H+ R HK
Sbjct:    1 MGTE--KFCLKWNDFESNISLAFREIRDEKDFFDVTLACDDDQ---LQAHKVILSACSPFFRNILKR------NPHQHPLLYLKGVKYSDLQSVLNFMYHGEVNVAQDELNSFLAVAEELRVKGLTQNNSG---STKKENSAPKSPPSKSRASESAAPAPKRPRPNPPAPAFIQDDDIQEVVPVKSEPRDIASVPSDPYSNNTAIATSNQHQLQTEEDAYEDNYED--YEGYDQSYDSTMMDP-------NMTGDGNKGMKLEDLELNLENLISKTGSGYSCNQCGKHCLDRTAARNHVEALHFPSKGHTCPMCGKFMKTKNALNNHVYRHHK 310
[Close]
BLAST of longitudinals lacking vs. nr
Match: gi|1325312195|ref|XP_023337732.1| (protein tramtrack, beta isoform-like isoform X9 [Eurytemora affinis])

HSP 1 Score: 160.999 bits (406), Expect = 9.699e-44
Identity = 111/321 (34.58%), Postives = 169/321 (52.65%), Query Frame = 0 
Query:    1 MGSDLDNYCLKWNDFQAHVSGACHTLREEADFFDVVLGCDQSQGRTLQAHKVILAACSSFFKDILKQHEASTVSSHTSPFIYLRGVPFTHMAAILDFMYQGEVSVRQTDLSAFLAVAEDLQVKGLAQ----------------PGCDPIQPTPDELPAAASPLPNIKLE--EPPSSPANPLASTSDFQSVKVEPLIMDEAM--------EQIVEGNPEDFLYETVEETDTGSEDPLHRNDETTLSAAGSPSWTNGEVVRLADGRGGQCLRCGKGFALFVTAVRHFKLSHFE-SENLPCPYCQSVMRTKSYLKDHLRRKHKV 294
            MGS  + +CL+WNDF++++S +   LR++ DFFD+ L C+  Q   +QAHKVIL+ACS FF+ ILK+++      H  P +YL+GV F+ + A+L+FMYQGEV+V Q DL++FLAVAE+L+VKGL Q                P  D   P P + P  ++   N K++  EP      P     + +S  V+P +   A         E +VE   +   Y+   E D G +D +    ++T++  G+PS  +G    LA+     C  CG+  +    A+RH +  H   +E   C  C  V   K  L  H+R  H++
Sbjct:    1 MGSS-EKFCLRWNDFESNISISFRELRDDKDFFDITLACEDDQ---VQAHKVILSACSPFFRSILKRNQ------HQHPLLYLKGVKFSELQAVLNFMYQGEVNVAQEDLNSFLAVAEELKVKGLTQSNTKSSPQPKHRSRDPPENDSAPPPPSKRPRQSNSAVNTKVKSYEPEVQEMIP-----NVKSEPVQPEVQSMAAVEPYQAGGEPLVEYGEDYGDYDGGYEGDAGYDDSMM---DSTMT--GTPS-ADGNKEYLAEDE-LTCRLCGRVSSTTYNALRHVRYVHSGITEQASCNICGKVFGRKQVLDRHIRNIHQL 299
[Close]
BLAST of longitudinals lacking vs. nr
Match: gi|1325312185|ref|XP_023337727.1| (protein tramtrack, beta isoform-like isoform X4 [Eurytemora affinis])

HSP 1 Score: 160.999 bits (406), Expect = 1.833e-43
Identity = 116/327 (35.47%), Postives = 169/327 (51.68%), Query Frame = 0 
Query:    1 MGSDLDNYCLKWNDFQAHVSGACHTLREEADFFDVVLGCDQSQGRTLQAHKVILAACSSFFKDILKQHEASTVSSHTSPFIYLRGVPFTHMAAILDFMYQGEVSVRQTDLSAFLAVAEDLQVKGLAQ----------------PGCDPIQPTPDELPAAASPLPNIKLE--EPPSSPANPLASTSDFQ-----SVKVEPLIMDEAMEQIVEGNPEDFLYETVEETDTGSEDPLHRNDET-TLSAAGSP----SWTNGEVVRLAD---GRGGQCLRCGKGFALFVTAVRHFKLSHF-ESEN-LPCPYCQSVMR-TKSYLKDHLRRKHK 293
            MGS  + +CL+WNDF++++S +   LR++ DFFD+ L C+  Q   +QAHKVIL+ACS FF+ ILK+++      H  P +YL+GV F+ + A+L+FMYQGEV+V Q DL++FLAVAE+L+VKGL Q                P  D   P P + P  ++   N K++  EP      P   +   Q        VEP       E +VE   +   Y+   E D G +D +  +  T T SA G+       TNG V    D   G+   CL CGK     +  + H + +H  E +N   C  C SV + T   + +H+ R H+
Sbjct:    1 MGSS-EKFCLRWNDFESNISISFRELRDDKDFFDITLACEDDQ---VQAHKVILSACSPFFRSILKRNQ------HQHPLLYLKGVKFSELQAVLNFMYQGEVNVAQEDLNSFLAVAEELKVKGLTQSNTKSSPQPKHRSRDPPENDSAPPPPSKRPRQSNSAVNTKVKSYEPEVQEMIPNVKSEPVQPEVQSMAAVEPY--QAGGEPLVEYGEDYGDYDGGYEGDAGYDDSMMDSTMTGTPSADGNKEILEGLTNGHVKIREDRGLGKLWSCLHCGKENKNRMNILLHVEAAHIHEMQNRYSCYICNSVSKSTYKAMSNHIYRDHR 315
[Close]
BLAST of longitudinals lacking vs. nr
Match: gi|1325299268|ref|XP_023331612.1| (transcription factor GAGA-like isoform X3 [Eurytemora affinis])

HSP 1 Score: 160.614 bits (405), Expect = 2.285e-43
Identity = 111/332 (33.43%), Postives = 167/332 (50.30%), Query Frame = 0 
Query:    6 DNYCLKWNDFQAHVSGACHTLREEADFFDVVLGCDQSQGRTLQAHKVILAACSSFFKDILKQHEASTVSSHTSPFIYLRGVPFTHMAAILDFMYQGEVSVRQTDLSAFLAVAEDLQVKGLAQPGCDPIQPTPD-ELPAAASPLPNIKLEE-------------PPSSPANPLASTSDFQSVKVEP------------------LIMDEAMEQIVE----GNPEDFLYETV-EETDTGSEDPLHRN--DETTLSAAGSPSWTNGEVVRLADGRGGQCLRCGKGFALFVTAVRHFKLSHFESENLP-CPYCQSVMRTKSYLKDHLRRKHKVYQG 297
            + +CLKWNDF++++S A   LR+E +FFD+ L C+ +Q   +QAHKVIL+ACS FF+++LK      V+ H  P IYLRG+ F  + ++L+FMY GEV+V Q +L++FLAVAEDL+VKGL Q       P P    P   + +P+                  PP  P+NP     +   VK EP                  +  DE  E+  E    G  + +L E + ++T+ GS+  +  +  D   L+ + S     G+V         +C+ CGK  +    A +HF+  HF S   P C  C    RTK  L  H+ + H+ ++ 
Sbjct:    4 EKFCLKWNDFESNISVAFRDLRDEKEFFDITLACEDNQ---IQAHKVILSACSPFFRNMLK------VNPHQHPLIYLRGMKFADLESVLNFMYYGEVNVAQDELNSFLAVAEDLRVKGLTQNKNGESVPDPKPRTPPVKTHIPDRDPPPPAKRPRPTPQAALPP--PSNPDDDIQEVVPVKSEPKDSVPILPSPSGYHSQALVQQDEYDERYDEYDQDGYDDQYLGEGLHQDTEKGSDQIIMGDAADLNNLAKSYSEPAGQGQV---------RCMLCGKISSHSGNARQHFEAHHFASNQAPVCTVCDKSFRTKHSLASHMSKNHRGFRA 315
[Close]
BLAST of longitudinals lacking vs. nr
Match: gi|1325315127|ref|XP_023339257.1| (protein tramtrack, beta isoform-like isoform X34 [Eurytemora affinis])

HSP 1 Score: 160.229 bits (404), Expect = 2.550e-43
Identity = 108/326 (33.13%), Postives = 157/326 (48.16%), Query Frame = 0 
Query:    1 MGSDLDNYCLKWNDFQAHVSGACHTLREEADFFDVVLGCDQSQGRTLQAHKVILAACSSFFKDILKQHEASTVSSHTSPFIYLRGVPFTHMAAILDFMYQGEVSVRQTDLSAFLAVAEDLQVKGLAQPGCDPIQPTPDELPAAASPLPNIKLEEPPSSPANPLASTSDFQSVKVEPLIMDEAMEQI--VEGNPEDF---------LYE---------TVEETDTGSE----------DPLHRNDETTLSAAGSPSWTNGEVVRLA--DGRGGQCLRCGKGFALFVTAVRHFKLSHFESENLPCPYCQSVMRTKSYLKDHLRRKHKV 294
            MG++   +CLKWNDF++++S A   +R+E DFFDV L CD  Q   LQAHKVIL+ACS FF++ILK+      + H  P +YL+GV ++ + ++L+FMY GEV+V Q +L++FLAVAE+L+VKGL Q   +  Q      P + SP P      P    + P                 D+ ++++  V+  P D          +Y+           EE D G +          D  +       S AG      G V  L    G G  C  CGK       A RH +++HF+ +   C  C    +    L DH+R+ H V
Sbjct:    1 MGTE--KFCLKWNDFESNISLAFREIRDEKDFFDVTLACDDDQ---LQAHKVILSACSPFFRNILKR------NPHQHPLLYLKGVKYSDLQSVLNFMYHGEVNVAQDELNSFLAVAEELRVKGLTQN--NGSQSAKGREPVSKSPPPIKSNARPSERDSGPPPKRPRPTPPTQITPPDDDDIQEVVPVKSEPRDSSAVISTPGDMYQPSSNQQSLALTEEDDYGQDESYDDYGQYGDGSYDGQMMDPSMAGGADGNKGIVENLLVDVGSGTMCKECGKILMHRFDARRHVRMTHFQHQAYDCEICGKRQKHIWALGDHMRKSHGV 313
[Close]
BLAST of longitudinals lacking vs. nr
Match: gi|1325312189|ref|XP_023337729.1| (protein tramtrack, beta isoform-like isoform X6 [Eurytemora affinis])

HSP 1 Score: 158.688 bits (400), Expect = 9.746e-43
Identity = 106/330 (32.12%), Postives = 166/330 (50.30%), Query Frame = 0 
Query:    1 MGSDLDNYCLKWNDFQAHVSGACHTLREEADFFDVVLGCDQSQGRTLQAHKVILAACSSFFKDILKQHEASTVSSHTSPFIYLRGVPFTHMAAILDFMYQGEVSVRQTDLSAFLAVAEDLQVKGLAQ----------------PGCDPIQPTPDELPAAASPLPNIKLE--EPPSSPANPLASTSDFQSVKVEPLIMDEAM--------EQIVEGNPEDFLYETVEETDTGSEDPLHRNDETTLSAAGSPSWTNG-----------EVVRLADGRGGQCLRCGKGFALFVTAVRHFKLSHFE-SENLPCPYCQSVMRTKSYLKDHLRRKH 292
            MGS  + +CL+WNDF++++S +   LR++ DFFD+ L C+  Q   +QAHKVIL+ACS FF+ ILK+++      H  P +YL+GV F+ + A+L+FMYQGEV+V Q DL++FLAVAE+L+VKGL Q                P  D   P P + P  ++   N K++  EP      P     + +S  V+P +   A         E +VE   +   Y+   E D G +D +    ++T++   S     G           E ++  +G+  +C  C     +     RH +  H   SEN+ C  C      ++  ++H+R  H
Sbjct:    1 MGSS-EKFCLRWNDFESNISISFRELRDDKDFFDITLACEDDQ---VQAHKVILSACSPFFRSILKRNQ------HQHPLLYLKGVKFSELQAVLNFMYQGEVNVAQEDLNSFLAVAEELKVKGLTQSNTKSSPQPKHRSRDPPENDSAPPPPSKRPRQSNSAVNTKVKSYEPEVQEMIP-----NVKSEPVQPEVQSMAAVEPYQAGGEPLVEYGEDYGDYDGGYEGDAGYDDSMM---DSTMTGTPSADGNKGPPPNELVDSYIEEIQTGEGKEYRCTVCPYRSRMAHNTRRHIRYVHLHYSENVQCGVCLKNFTRQANYREHMRSVH 312
[Close]
BLAST of longitudinals lacking vs. nr
Match: gi|1325315121|ref|XP_023339254.1| (protein tramtrack, beta isoform-like isoform X31 [Eurytemora affinis])

HSP 1 Score: 158.303 bits (399), Expect = 1.663e-42
Identity = 110/326 (33.74%), Postives = 158/326 (48.47%), Query Frame = 0 
Query:    1 MGSDLDNYCLKWNDFQAHVSGACHTLREEADFFDVVLGCDQSQGRTLQAHKVILAACSSFFKDILKQHEASTVSSHTSPFIYLRGVPFTHMAAILDFMYQGEVSVRQTDLSAFLAVAEDLQVKGLAQPGCDPIQPTPDELPAAASPLPNIKLEEPPSSPANPLASTSDFQSVKVEPLIMDEAMEQI--VEGNPEDF---------LYE---------TVEETDTGSE----------DPLHRNDETTLSAAGSPSWTNGEVVRLADGRGG---QCLRCGKGFALFVTAVRHFKLSHFESENLPCPYCQSVMRTKSYLKDHLRRKHK 293
            MG++   +CLKWNDF++++S A   +R+E DFFDV L CD  Q   LQAHKVIL+ACS FF++ILK++       H  P +YL+GV ++ + ++L+FMY GEV+V Q +L++FLAVAE+L+VKGL Q   +  Q      P + SP P      P    + P                 D+ ++++  V+  P D          +Y+           EE D G +          D  +       S AG      G  +    GR     QCL CGK  A     VRH + +HF   N PC +C     + + L+ H  R HK
Sbjct:    1 MGTE--KFCLKWNDFESNISLAFREIRDEKDFFDVTLACDDDQ---LQAHKVILSACSPFFRNILKRN------PHQHPLLYLKGVKYSDLQSVLNFMYHGEVNVAQDELNSFLAVAEELRVKGLTQN--NGSQSAKGREPVSKSPPPIKSNARPSERDSGPPPKRPRPTPPTQITPPDDDDIQEVVPVKSEPRDSSAVISTPGDMYQPSSNQQSLALTEEDDYGQDESYDDYGQYGDGSYDGQMMDPSMAGGADGNKGRPLESYIGRTDSDFQCLVCGKTGARKDGIVRHLENNHFPG-NHPCSFCSKTFNSINSLQAHESRNHK 312
[Close]
BLAST of longitudinals lacking vs. nr
Match: gi|1325267187|ref|XP_023340327.1| (zinc finger protein 131-like isoform X10 [Eurytemora affinis])

HSP 1 Score: 157.147 bits (396), Expect = 3.059e-42
Identity = 107/290 (36.90%), Postives = 151/290 (52.07%), Query Frame = 0 
Query:    1 MGSDLDNYCLKWNDFQAHVSGACHTLREEADFFDVVLGCDQSQGRTLQAHKVILAACSSFFKDILKQHEASTVSSHTSPFIYLRGVPFTHMAAILDFMYQGEVSVRQTDLSAFLAVAEDLQVKGLAQPG-CDPIQPTPD----ELPAAASPLPNIKLEEPPSSPAN--------PLASTSDFQSVKVEPLIM-------DEAMEQIVEGNPEDFLYETVEETDTGSEDPLHRNDETTLSAAGSPSWTNGEVV-----RLADGRGGQ---CLRCGKGFALFVTAVRHFKLS 262
            MGS  + +CL+WNDF++++S A   LREE DFFDV L CD SQ   LQAHKVIL+ACS FF++IL+++       H  P +YL+GV +  + ++L+FMY GEV+V Q +L++FL+VAE+L+VKGL Q    D  +P P     + P  A P    +   PP +P+         P+ S    Q V V   +        D+    + E  P+D+ YE  E  D GS DP      +T+ A G+    N +++     R  D RG     C  C            H KLS
Sbjct:    1 MGSS-EKFCLRWNDFESNISVAFRELREEKDFFDVTLACDDSQ---LQAHKVILSACSPFFRNILRKN------PHQHPLLYLKGVKYKELVSVLNFMYMGEVNVAQEELNSFLSVAEELRVKGLTQNNSSDSAKPEPKSRSRDPPETAPPAKKNRPSVPPPTPSQDDDIQEVIPVKSEPRDQPVPVSQELNHGYQDTGDQGTVALQENYPDDYDYEGYEGYDEGSYDP------STMQATGADG--NKDLIEEMLDRGLDERGTTIFICNSCVYSSKKKYNVQEHIKLS 272
The following BLAST results are available for this feature:
BLAST of longitudinals lacking vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 25
Match NameE-valueIdentityDescription
EMLSAG000000072284.113e-2427.59supercontig:LSalAtl2s:LSalAtl2s404:613982:614914:-... [more]
EMLSAG000000024554.995e-2442.50supercontig:LSalAtl2s:LSalAtl2s1471:52173:56863:1 ... [more]
EMLSAG000000092381.962e-2328.21supercontig:LSalAtl2s:LSalAtl2s588:466746:467909:-... [more]
EMLSAG000000031891.374e-2225.45supercontig:LSalAtl2s:LSalAtl2s176:671224:672666:1... [more]
EMLSAG000000074811.411e-2237.01supercontig:LSalAtl2s:LSalAtl2s42:537429:544881:1 ... [more]

Pages

back to top
BLAST of longitudinals lacking vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
gi|73621174|sp|Q7KRI2.1|LOLAL_DROME2.365e-2846.46RecName: Full=Longitudinals lacking protein-like; ... [more]
gi|13124701|sp|Q01295.2|BRC1_DROME1.171e-2541.94RecName: Full=Broad-complex core protein isoforms ... [more]
gi|13123979|sp|Q24206.2|BRC4_DROME1.382e-2541.94RecName: Full=Broad-complex core protein isoform 6[more]
gi|33112291|sp|Q8IN81.1|FRU_DROME8.298e-2432.04RecName: Full=Sex determination protein fruitless[more]
gi|47117851|sp|P42282.3|TTKA_DROME1.048e-2239.23RecName: Full=Protein tramtrack, alpha isoform; Al... [more]
gi|27923726|sp|Q24174.2|ABRU_DROME1.253e-2242.86RecName: Full=Protein abrupt; AltName: Full=Protei... [more]
gi|20455517|sp|P17789.2|TTKB_DROME1.285e-2239.23RecName: Full=Protein tramtrack, beta isoform; Alt... [more]
gi|29428068|sp|Q9W0K7.2|BAB1_DROME6.056e-2238.33RecName: Full=Protein bric-a-brac 1[more]
gi|29428067|sp|Q9W0K4.2|BAB2_DROME5.821e-2033.33RecName: Full=Protein bric-a-brac 2[more]
gi|73920873|sp|Q9V5M6.4|LOLA5_DROME2.966e-1936.59RecName: Full=Longitudinals lacking protein, isofo... [more]

Pages

back to top
BLAST of longitudinals lacking vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|1325315087|ref|XP_023339236.1|6.736e-4432.62protein tramtrack, beta isoform-like isoform X14 [... [more]
gi|1325267171|ref|XP_023340287.1|8.489e-4434.63zinc finger protein 131-like isoform X5 [Eurytemor... [more]
gi|1325315185|ref|XP_023339289.1|8.568e-4434.23broad-complex core protein isoforms 1/2/3/4/5-like... [more]
gi|1325312195|ref|XP_023337732.1|9.699e-4434.58protein tramtrack, beta isoform-like isoform X9 [E... [more]
gi|1325312185|ref|XP_023337727.1|1.833e-4335.47protein tramtrack, beta isoform-like isoform X4 [E... [more]
gi|1325299268|ref|XP_023331612.1|2.285e-4333.43transcription factor GAGA-like isoform X3 [Eurytem... [more]
gi|1325315127|ref|XP_023339257.1|2.550e-4333.13protein tramtrack, beta isoform-like isoform X34 [... [more]
gi|1325312189|ref|XP_023337729.1|9.746e-4332.12protein tramtrack, beta isoform-like isoform X6 [E... [more]
gi|1325315121|ref|XP_023339254.1|1.663e-4233.74protein tramtrack, beta isoform-like isoform X31 [... [more]
gi|1325267187|ref|XP_023340327.1|3.059e-4236.90zinc finger protein 131-like isoform X10 [Eurytemo... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold691_size110934supercontigscaffold691_size110934:19119..20363 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
NoteF:metal ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold691_size110934-snap-gene-0.34-mRNA-1maker-scaffold691_size110934-snap-gene-0.34-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold691_size110934:19119..20363-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold691_size110934-snap-gene-0.34 ID=maker-scaffold691_size110934-snap-gene-0.34|Name=longitudinals lacking|organism=Tigriopus kingsejongensis|type=gene|length=1245bp|location=Sequence derived from alignment at scaffold691_size110934:19119..20363- (Tigriopus kingsejongensis)
ATGGGGTCGGATTTGGACAATTATTGCTTGAAGTGGAACGACTTCCAAGC
CCACGTGAGTGGGGCGTGCCATACGCTAAGGGAAGAGGCGGACTTTTTCG
ACGTGGTCCTGGGCTGCGATCAGAGCCAAGGCCGCACCCTCCAAGCCCAC
AAGGTCATCCTGGCCGCGTGCTCGAGCTTTTTCAAGGACATCCTCAAGCA
GCACGAGGCCTCGACGGTTTCGTCCCACACCAGCCCTTTCATCTACTTGC
GCGGTGTGCCTTTCACTCACATGGCCGCTATCCTGGATTTCATGTACCAG
GGCGAGGTGAGCGTTCGCCAGACGGACCTGAGCGCCTTCTTGGCCGTGGC
CGAAGACCTTCAAGTCAAGGGCTTAGCCCAGCCCGGCTGCGATCCGATCC
AGCCAACCCCAGACGAGCTTCCGGCGGCGGCTAGTCCGCTACCCAATATC
AAACTGGAGGAGCCACCTAGCTCGCCCGCGAATCCACTAGCCTCCACCTC
CGACTTTCAGAGTGTCAAGGTTGAGCCCTTGATCATGGATGAGGCCATGG
AGCAGATTGTCGAAGGCAATCCCGAAGATTTTCTGTACGAAACTGTCGAA
GAGACAGACACTGGCTCCGAGGACCCTTTACATCGGAACGATGAAACGAC
ACTGAGTGCTGCAGGTGAGATATTGAGCCTAGCCCAAGTTGGATATTTAA
GCTGGGTCGAAATGGCGAACATCCTAGTCTGGACAAAACGCCACTTCGAG
GCCGCTTCTTTCAATGAGTGTTGAGGTCATTCTTTCTCGGGTCTCTCTGT
TTCAGGTTCACCCTCTTGGACCAATGGTGAAGTGGTTCGTCTCGCTGACG
GACGCGGGGGCCAATGTTTGAGGTGTGGCAAGGGCTTCGCCCTGTTTGTG
ACGGCGGTTAGGCATTTCAAACTTAGTCATTTCGAATCCGAAAACTTGCC
ATGTCCTTACTGTCAGTCCGTAATGAGGACCAAGAGCTATCTCAAAGACC
ATTTGCGGAGGAAGCACAAAGTTTATCAAGGTCCATTTAAAGGGCCACCT
CCTACCTAATTGACGTTAATGTGTGCTCCTACCCTCAATACCGAGGGTAA
GAGATATGTTCTTATCACCCATGGGCATAAAATTTGTATGTCACCGACTT
GTTCGAAGTTAAAGGCTTTTGAGGAGTACTTTGCCCAATGATTCCTGCCA
GCCTCATGAAAATCGAAGATCACACTGACATTGAAAGGAATAAAC
back to top
Synonyms
The feature 'longitudinals lacking' has the following synonyms
Synonym
Tk06100
Add to Basket