longitudinals lacking, maker-scaffold691_size110934-snap-gene-0.34 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of longitudinals lacking vs. L. salmonis genes
Match: EMLSAG00000007228 (supercontig:LSalAtl2s:LSalAtl2s404:613982:614914:-1 gene:EMLSAG00000007228 transcript:EMLSAT00000007228 description:"augustus-LSalAtl2s404-processed-gene-6.4") HSP 1 Score: 98.2117 bits (243), Expect = 4.113e-24 Identity = 80/290 (27.59%), Postives = 134/290 (46.21%), Query Frame = 0 Query: 10 LKWNDFQAHVSGACHTLREEADFFDVVLGCDQSQGRTLQAHKVILAACSSFFKDILKQHEASTVSSHTSPFIYLRGVPFTHMAAILDFMYQGEVSVRQTDLSAFLAVAEDLQVKGL---AQPGCDPIQPTPD---ELPAAASPLPNIKLEEPPSSPANPLASTSDFQSVKVEPLIMDEAMEQIVEGNPEDFLYETVEETDTGSEDPLHRNDETTLSAAGSPSWTNGEVVRLADGRGGQCLRCGKGFALFVTAVR-HFKLSHFESENLPCPYCQSVMRTKSYLKDHLRRKH 292 LKWN F ++ + L E + FDV L + R ++AHK +L ACS F+ I+K + T P+IYL+G+ H+ ++ F+Y GEV V Q +L F+A+A++ ++K L P PTP +LP +S + N+ + SP P A + + P M++ + N +ET+E T ++D ++ + A N + G+ QC +C + A+R H + +H S+ + C C +T+ L +H R H Sbjct: 9 LKWNSFDSNFKESLSDLYENEELFDVTLI---TGSRQIKAHKFVLCACSPVFRSIIK-----SAPPQTHPWIYLKGINVDHLELLISFLYHGEVKVIQEELDDFIAIAKEFEIKCLNTEKMPTSLNDSPTPSPPRDLPDLSS-VDNVSDDLLSISP--PTAQIEKYYT----PYEMNDLY---IAQNISPDKFETME---TNNKDIKLDKNKKHIRALDLE--INRYYTKQRTGKKFQCKKCS-YLTPYGNAIRNHVESNHISSKGVVCTLCSKKFKTRLSLHNHCYRVH 274
BLAST of longitudinals lacking vs. L. salmonis genes
Match: EMLSAG00000002455 (supercontig:LSalAtl2s:LSalAtl2s1471:52173:56863:1 gene:EMLSAG00000002455 transcript:EMLSAT00000002455 description:"maker-LSalAtl2s1471-snap-gene-0.12") HSP 1 Score: 100.908 bits (250), Expect = 4.995e-24 Identity = 51/120 (42.50%), Postives = 76/120 (63.33%), Query Frame = 0 Query: 8 YCLKWNDFQAHVSGACHTLREEADFFDVVLGCDQSQGRTLQAHKVILAACSSFFKDILKQHEASTVSSHTSPFIYLRGVPFTHMAAILDFMYQGEVSVRQTDLSAFLAVAEDLQVKGLAQ 127 YCL+WN+ Q ++ L F DV L +G L+AHK++L+ACS +F+ +L +T H P ++LR V ++ M A+L+FMY+GEVSV Q +LS+ L VAE L++KGLA+ Sbjct: 10 YCLRWNNHQHNLLSVFEDLLNHEAFVDVTLAV---EGLQLKAHKMVLSACSPYFQSML----YNTPDRH--PIVFLRDVRYSEMKALLEFMYRGEVSVDQENLSSLLKVAEGLKIKGLAE 120
BLAST of longitudinals lacking vs. L. salmonis genes
Match: EMLSAG00000009238 (supercontig:LSalAtl2s:LSalAtl2s588:466746:467909:-1 gene:EMLSAG00000009238 transcript:EMLSAT00000009238 description:"snap_masked-LSalAtl2s588-processed-gene-4.20") HSP 1 Score: 97.8265 bits (242), Expect = 1.962e-23 Identity = 99/351 (28.21%), Postives = 151/351 (43.02%), Query Frame = 0 Query: 7 NYCLKWNDFQAHVSGACHTLREEADFFDVVL--GC--DQSQGRTLQAHKVILAACSSFFKDILKQHEASTVSS-HTSPFIYLRGVPFTHMAAILDFMYQGEVSVRQTDLSAFLAVAEDLQVKGLAQ-----PGCDPI-------------------------QPTPDELPAAASPLPNI------KLEEPPSSPANPLASTSDFQ---SVKVEPLIMDE--------AMEQIVE--GNPEDFLYETVEETDTGSEDPLHRNDETTLSAAGSPSWTNGEVVRLADGRGGQCLRCGKGFALFVTAVRHFKLSHFESEN--LPCPYCQSVMRTKSYLKDHLRRKHKVYQGPFKG 301 NYCL+ ND++ + + +LR++ F DV L GC + + +AH+VIL+ACSS+F +L + T+S H P + L V + A+LDFMY G+V++ LS+FLAVA+ L++KGL + P DP+ Q + P + P I EE PSS S++D + S+ P +++ AM I + P+D L T E + S RN+ T C C K F ++ RH K HF++EN + CP C +++ L HL R H V + +G Sbjct: 19 NYCLRLNDYEKKYAESFRSLRDDESFADVTLVAGCSSEDDSSTSFKAHRVILSACSSYFHSLLIK----TLSPWHVHPVLLLTDVRPRDLHALLDFMYLGQVNINNEALSSFLAVAQRLRIKGLCETTFQIPKKDPVYVATGHGKRAKFMTTTTSSVLRSTTQQIIQQHPHKTTDAPIILATSAANQEEVPSSAVTEFISSNDGEFIPSLPSHPFMINTDPTTPTPAAMVTIEDKMNEPQD-LTPTHTEVISPSTPKKDRNNRKT------------------------CGYCHKDFHE-MSLKRHIKDVHFKNENTFVICPQCCKQYASQNSLYSHLNRVHGVKKEMMEG 339
BLAST of longitudinals lacking vs. L. salmonis genes
Match: EMLSAG00000003189 (supercontig:LSalAtl2s:LSalAtl2s176:671224:672666:1 gene:EMLSAG00000003189 transcript:EMLSAT00000003189 description:"augustus-LSalAtl2s176-processed-gene-6.4") HSP 1 Score: 94.3597 bits (233), Expect = 1.374e-22 Identity = 84/330 (25.45%), Postives = 132/330 (40.00%), Query Frame = 0 Query: 6 DNYCLKWNDFQAHVSGACHTLREEADFFDVVLGCDQSQGRTLQAHKVILAACSSFFKDILKQHEASTVSSHTSPFIYLRGVPFTHMAAILDFMYQGEVSVRQTDLSAFLAVAEDLQVKGLAQ--------PGCDPIQPTPDELPAAASPLPNIKLEEPPSSPANPLASTSDFQSVKVEPLIMDEAMEQIVEGNPEDFLYETVEETDTGSEDPLHRNDETTLS---AAGSPSWTNGEVVRLADG-----------------------------RGGQCLRCGKGFALF--VTAVRHFKLSHFESENLPCPYCQSVMRTKSYLKDHLRRKHK 293 +N C+KWN++++++ L + FDV L S R ++AHKVIL+ACS F+ I++ +VS H P IYL+ + F H+ IL F+Y GE+ V +++ L VA+ Q+KGL G D + +L ++ + K + S NP D + ++ E E FLY + D + N + +S A S + N R A+G +G +C +C F F RH + H ++ C C +T LK H HK Sbjct: 5 ENLCIKWNEYESNLKEGLSELLHNEELFDVTL---ISGSRVIKAHKVILSACSPVFRSIIQ-----SVSFHPHPVIYLKDINFDHLELILSFLYYGEMRVASDEINDLLCVADVFQIKGLYNNTITSATINGEDIFIQSNSDLYSSIN-----KSFQHQSCNTNPNKECQDI-------FAPNSSLNTKRENPDESFLYSLESSYNPDLVDGVQSNCDGDVSYDMANSSSRYLNNACGREAEGANISTKDDNEKYHQSLKPEIKKHFKKSINKGFECKKC--KFTTFDRTCINRHIEYRHMITKGFCCHVCNKNYKTICTLKRHNTHFHK 312
BLAST of longitudinals lacking vs. L. salmonis genes
Match: EMLSAG00000007481 (supercontig:LSalAtl2s:LSalAtl2s42:537429:544881:1 gene:EMLSAG00000007481 transcript:EMLSAT00000007481 description:"maker-LSalAtl2s42-augustus-gene-5.9") HSP 1 Score: 96.2857 bits (238), Expect = 1.411e-22 Identity = 47/127 (37.01%), Postives = 80/127 (62.99%), Query Frame = 0 Query: 1 MGSDLDNYCLKWNDFQAHVSGACHTLREEADFFDVVLGCDQSQGRTLQAHKVILAACSSFFKDILKQHEASTVSSHTSPFIYLRGVPFTHMAAILDFMYQGEVSVRQTDLSAFLAVAEDLQVKGLAQ 127 MG++ +CLKWN+ ++ + TL EE DV L ++G+ L+AHKVIL+ACS +F+ + + ++ P IY++ V F ++ A++++MY+GE +V Q L +F+ AE LQ++GLA+ Sbjct: 1 MGTE-QQFCLKWNNHRSTILSVFDTLLEEESLVDVTL---TAEGQFLRAHKVILSACSPYFRIMFR------AANEKHPVIYMQNVDFENLKALVEYMYKGEANVPQHMLPSFIRTAESLQIRGLAE 117
BLAST of longitudinals lacking vs. SwissProt
Match: gi|123884472|sp|Q08CY1.1|KLH22_XENTR (RecName: Full=Kelch-like protein 22) HSP 1 Score: 58.5362 bits (140), Expect = 1.976e-8 Identity = 38/128 (29.69%), Postives = 67/128 (52.34%), Query Frame = 0 Query: 16 QAHVSGACHTLREEADFFDVVLGCDQSQGRTLQAHKVILAACSSFFKDI----LKQHEASTVSSHTSPFIYLRGVPFTHMAAILDFMYQGEVSVRQTDLSAFLAVAEDLQVKGLAQPGCDPIQPTPDE 139 QA +SG LR+ FDVVL + +G++++AH+++LAA +F+ + LK+ + V H GV ++ M I+DF+Y ++++ ++ L A LQ+ + Q CD + DE Sbjct: 34 QALLSGLV-ALRDSGILFDVVL---KVEGKSIEAHRILLAASCDYFRGMFAGGLKEMDQREVQIH--------GVSYSAMCRIMDFIYTSDLALSVNNVQETLTAACQLQISEVIQFCCDFLVSWVDE 149
BLAST of longitudinals lacking vs. SwissProt
Match: gi|97054498|sp|Q53G59.2|KLH12_HUMAN (RecName: Full=Kelch-like protein 12; AltName: Full=CUL3-interacting protein 1; AltName: Full=DKIR homolog; Short=hDKIR) HSP 1 Score: 57.3806 bits (137), Expect = 5.353e-8 Identity = 35/126 (27.78%), Postives = 63/126 (50.00%), Query Frame = 0 Query: 13 NDFQAHVSGACHTLREEADFFDVVLGCDQSQGRTLQAHKVILAACSSFFKDILKQHEASTVSSHTSPFIYLRGVPFTHMAAILDFMYQGEVSVRQTDLSAFLAVAEDLQVKGLAQPGCDPIQPTPD 138 N + + ++LR+ DV L +Q + AH+++LAACS +F + S +S P++ ++G+ + M +LDF+Y V V ++ L A LQ+KG+ Q C+ ++ D Sbjct: 13 NTHAKSILNSMNSLRKSNTLCDVTLRVEQ---KDFPAHRIVLAACSDYFCAMF----TSELSEKGKPYVDIQGLTASTMEILLDFVYTETVHVTVENVQELLPAACLLQLKGVKQACCEFLESQLD 131
BLAST of longitudinals lacking vs. SwissProt
Match: gi|384872569|sp|Q8R2H4.2|KLH12_RAT (RecName: Full=Kelch-like protein 12; AltName: Full=CUL3-interacting protein 1) HSP 1 Score: 57.3806 bits (137), Expect = 5.450e-8 Identity = 35/126 (27.78%), Postives = 63/126 (50.00%), Query Frame = 0 Query: 13 NDFQAHVSGACHTLREEADFFDVVLGCDQSQGRTLQAHKVILAACSSFFKDILKQHEASTVSSHTSPFIYLRGVPFTHMAAILDFMYQGEVSVRQTDLSAFLAVAEDLQVKGLAQPGCDPIQPTPD 138 N + + ++LR+ DV L +Q + AH+++LAACS +F + S +S P++ ++G+ + M +LDF+Y V V ++ L A LQ+KG+ Q C+ ++ D Sbjct: 13 NTHAKSILNSMNSLRKSNTLCDVTLRVEQ---KDFPAHRIVLAACSDYFCAMF----TSELSEKGKPYVDIQGLTASTMEILLDFVYTETVHVTVENVQELLPAACLLQLKGVKQACCEFLESQLD 131
BLAST of longitudinals lacking vs. SwissProt
Match: gi|384956010|sp|E1B932.2|KLH12_BOVIN (RecName: Full=Kelch-like protein 12) HSP 1 Score: 56.9954 bits (136), Expect = 6.470e-8 Identity = 35/126 (27.78%), Postives = 63/126 (50.00%), Query Frame = 0 Query: 13 NDFQAHVSGACHTLREEADFFDVVLGCDQSQGRTLQAHKVILAACSSFFKDILKQHEASTVSSHTSPFIYLRGVPFTHMAAILDFMYQGEVSVRQTDLSAFLAVAEDLQVKGLAQPGCDPIQPTPD 138 N + + ++LR+ DV L +Q + AH+++LAACS +F + S +S P++ ++G+ + M +LDF+Y V V ++ L A LQ+KG+ Q C+ ++ D Sbjct: 13 NTHAKSILNSMNSLRKSNTLCDVTLRVEQ---KDFPAHRIVLAACSDYFCAMF----TSELSEKGKPYVDIQGLTASTMEILLDFVYTETVHVTVENVQELLPAACLLQLKGVKQACCEFLESQLD 131
BLAST of longitudinals lacking vs. SwissProt
Match: gi|81875867|sp|Q8BZM0.1|KLH12_MOUSE (RecName: Full=Kelch-like protein 12; AltName: Full=CUL3-interacting protein 1) HSP 1 Score: 56.6102 bits (135), Expect = 8.558e-8 Identity = 35/126 (27.78%), Postives = 62/126 (49.21%), Query Frame = 0 Query: 13 NDFQAHVSGACHTLREEADFFDVVLGCDQSQGRTLQAHKVILAACSSFFKDILKQHEASTVSSHTSPFIYLRGVPFTHMAAILDFMYQGEVSVRQTDLSAFLAVAEDLQVKGLAQPGCDPIQPTPD 138 N + + ++LR+ DV L +Q + AH+++LAACS +F + S +S P++ ++G+ M +LDF+Y V V ++ L A LQ+KG+ Q C+ ++ D Sbjct: 13 NTHAKSILNSMNSLRKSNTLCDVTLRVEQ---KDFPAHRIVLAACSDYFCAMF----TSELSEKGKPYVDIQGLTAATMEILLDFVYTETVHVTVENVQELLPAACLLQLKGVKQACCEFLESQLD 131
BLAST of longitudinals lacking vs. nr
Match: gi|1325267190|ref|XP_023340336.1| (protein abrupt-like isoform X11 [Eurytemora affinis]) HSP 1 Score: 183.726 bits (465), Expect = 1.412e-52 Identity = 114/318 (35.85%), Postives = 168/318 (52.83%), Query Frame = 0 Query: 1 MGSDLDNYCLKWNDFQAHVSGACHTLREEADFFDVVLGCDQSQGRTLQAHKVILAACSSFFKDILKQHEASTVSSHTSPFIYLRGVPFTHMAAILDFMYQGEVSVRQTDLSAFLAVAEDLQVKGLAQPG-CDPIQPTPD----ELPAAASPLPNIKLEEPPSSPAN--------PLASTSDFQSVKVEPLIM-------DEAMEQIVEGNPEDFLYETVEETDTGSEDPLHRNDETTLSAAGSPSWTNGEVV----RLADGRG-GQCLRCGKGFALFVTAVRHFKLSHFESENLPCPYCQSVMRTKSYLKDHLRRKHK 293 MGS + +CL+WNDF++++S A LREE DFFDV L CD SQ LQAHKVIL+ACS FF++IL+++ H P +YL+GV + + ++L+FMY GEV+V Q +L++FL+VAE+L+VKGL Q D +P P + P A P + PP +P+ P+ S Q V V + D+ + E P+D+ YE E D GS DP +T+ A G+ + E V DG G C CG+ + H + H S C C +++TK+ L++H+ +H+ Sbjct: 1 MGSS-EKFCLRWNDFESNISVAFRELREEKDFFDVTLACDDSQ---LQAHKVILSACSPFFRNILRKN------PHQHPLLYLKGVKYKELVSVLNFMYMGEVNVAQEELNSFLSVAEELRVKGLTQNNSSDSAKPEPKSRSRDPPETAPPAKKNRPSVPPPTPSQDDDIQEVIPVKSEPRDQPVPVSQELNHGYQDTGDQGTVALQENYPDDYDYEGYEGYDEGSYDP------STMQATGADGNKDYERVIQEKMYRDGTGVWTCTDCGRSSKVKNNIYEHIEALHVNSRGYSCTICSRILKTKNTLRNHMNLQHR 302
BLAST of longitudinals lacking vs. nr
Match: gi|1325267197|ref|XP_023340349.1| (broad-complex core protein isoforms 1/2/3/4/5-like isoform X13 [Eurytemora affinis]) HSP 1 Score: 182.185 bits (461), Expect = 6.548e-52 Identity = 117/314 (37.26%), Postives = 168/314 (53.50%), Query Frame = 0 Query: 1 MGSDLDNYCLKWNDFQAHVSGACHTLREEADFFDVVLGCDQSQGRTLQAHKVILAACSSFFKDILKQHEASTVSSHTSPFIYLRGVPFTHMAAILDFMYQGEVSVRQTDLSAFLAVAEDLQVKGLAQPG-CDPIQPTPD----ELPAAASPLPNIKLEEPPSSPAN--------PLASTSDFQSVKVEPLIM-------DEAMEQIVEGNPEDFLYETVEETDTGSEDPLHRNDETTLSAAGSPSWTNGEVVRLADGRGG-QCLRCGKGFALFVTAVR-HFKLSHFESENLPCPYCQSVMRTKSYLKDHLRRKH 292 MGS + +CL+WNDF++++S A LREE DFFDV L CD SQ LQAHKVIL+ACS FF++IL+++ H P +YL+GV + + ++L+FMY GEV+V Q +L++FL+VAE+L+VKGL Q D +P P + P A P + PP +P+ P+ S Q V V + D+ + E P+D+ YE E D GS DP +T+ A G+ + +GG QC CG F+ + T +R H + H S+ CP C +TK+ L H +R H Sbjct: 1 MGSS-EKFCLRWNDFESNISVAFRELREEKDFFDVTLACDDSQ---LQAHKVILSACSPFFRNILRKN------PHQHPLLYLKGVKYKELVSVLNFMYMGEVNVAQEELNSFLSVAEELRVKGLTQNNSSDSAKPEPKSRSRDPPETAPPAKKNRPSVPPPTPSQDDDIQEVIPVKSEPRDQPVPVSQELNHGYQDTGDQGTVALQENYPDDYDYEGYEGYDEGSYDP------STMQATGADGNKAALNRMMEKVQGGWQCSTCG-FFSTYSTNMRNHVEAKHVTSQGYICPECSKWFKTKNSLNVHKQRSH 297
BLAST of longitudinals lacking vs. nr
Match: gi|1325267162|ref|XP_023340263.1| (zinc finger and BTB domain-containing protein 14-like isoform X2 [Eurytemora affinis]) HSP 1 Score: 177.178 bits (448), Expect = 1.291e-49 Identity = 118/341 (34.60%), Postives = 173/341 (50.73%), Query Frame = 0 Query: 1 MGSDLDNYCLKWNDFQAHVSGACHTLREEADFFDVVLGCDQSQGRTLQAHKVILAACSSFFKDILKQHEASTVSSHTSPFIYLRGVPFTHMAAILDFMYQGEVSVRQTDLSAFLAVAEDLQVKGLAQPG-CDPIQPTPD----ELPAAASPLPNIKLEEPPSSPAN--------PLASTSDFQSVKVEPLIM-------DEAMEQIVEGNPEDFLYETVEETDTGSEDPLHRNDETTLSAAGSPS-------------------WTNGEVVRLADGRGGQ--CLRCGKGFALFVTAVRHFKLSHFESENLP------CPYCQSVMRTKSYLKDHLRRKHKV 294 MGS + +CL+WNDF++++S A LREE DFFDV L CD SQ LQAHKVIL+ACS FF++IL+++ H P +YL+GV + + ++L+FMY GEV+V Q +L++FL+VAE+L+VKGL Q D +P P + P A P + PP +P+ P+ S Q V V + D+ + E P+D+ YE E D GS DP +T+ A G+ W + R+ G GG C C +++ V++ LSH +S++LP C C + T S L+ H R+H + Sbjct: 1 MGSS-EKFCLRWNDFESNISVAFRELREEKDFFDVTLACDDSQ---LQAHKVILSACSPFFRNILRKN------PHQHPLLYLKGVKYKELVSVLNFMYMGEVNVAQEELNSFLSVAEELRVKGLTQNNSSDSAKPEPKSRSRDPPETAPPAKKNRPSVPPPTPSQDDDIQEVIPVKSEPRDQPVPVSQELNHGYQDTGDQGTVALQENYPDDYDYEGYEGYDEGSYDP------STMQATGADGNKGRQGKEPIVGNGLEGMDWKQETMDRMRKGDGGNWFCCECN-----YMSKVKNLLLSHVQSQHLPGFPGYTCALCSAHSTTYSGLEKHTSRQHSI 320
BLAST of longitudinals lacking vs. nr
Match: gi|1325267178|ref|XP_023340303.1| (zinc finger and BTB domain-containing protein 14-like isoform X7 [Eurytemora affinis]) HSP 1 Score: 176.022 bits (445), Expect = 2.165e-49 Identity = 115/327 (35.17%), Postives = 165/327 (50.46%), Query Frame = 0 Query: 1 MGSDLDNYCLKWNDFQAHVSGACHTLREEADFFDVVLGCDQSQGRTLQAHKVILAACSSFFKDILKQHEASTVSSHTSPFIYLRGVPFTHMAAILDFMYQGEVSVRQTDLSAFLAVAEDLQVKGLAQPG-CDPIQPTPD----ELPAAASPLPNIKLEEPPSSPAN--------PLASTSDFQSVKVEPLIM-------DEAMEQIVEGNPEDFLYETVEETDTGSEDPLHRNDETTLSAAGSPSWTNGEVVRLADG--------------RGGQCLRCGKGFALFVTAVRHFKLSHFESENLPCPYCQSVMRTKSYLKDHLRRKHK 293 MGS + +CL+WNDF++++S A LREE DFFDV L CD SQ LQAHKVIL+ACS FF++IL+++ H P +YL+GV + + ++L+FMY GEV+V Q +L++FL+VAE+L+VKGL Q D +P P + P A P + PP +P+ P+ S Q V V + D+ + E P+D+ YE E D GS DP +T+ A G+ +G V + D G C CG L H + H + CP+C +K+ LK H+ R H+ Sbjct: 1 MGSS-EKFCLRWNDFESNISVAFRELREEKDFFDVTLACDDSQ---LQAHKVILSACSPFFRNILRKN------PHQHPLLYLKGVKYKELVSVLNFMYMGEVNVAQEELNSFLSVAEELRVKGLTQNNSSDSAKPEPKSRSRDPPETAPPAKKNRPSVPPPTPSQDDDIQEVIPVKSEPRDQPVPVSQELNHGYQDTGDQGTVALQENYPDDYDYEGYEGYDEGSYDP------STMQATGA----DGNKVCIVDNFANPGVEEHMQKTEAGWVCQACGWETRLKTRLWEHVEAKHVNTGGYTCPHCNKFCPSKNSLKAHVSRTHR 307
BLAST of longitudinals lacking vs. nr
Match: gi|1325267193|ref|XP_023340341.1| (broad-complex core protein isoforms 1/2/3/4/5-like isoform X12 [Eurytemora affinis]) HSP 1 Score: 174.481 bits (441), Expect = 5.238e-49 Identity = 114/314 (36.31%), Postives = 161/314 (51.27%), Query Frame = 0 Query: 1 MGSDLDNYCLKWNDFQAHVSGACHTLREEADFFDVVLGCDQSQGRTLQAHKVILAACSSFFKDILKQHEASTVSSHTSPFIYLRGVPFTHMAAILDFMYQGEVSVRQTDLSAFLAVAEDLQVKGLAQPG-CDPIQPTPD----ELPAAASPLPNIKLEEPPSSPAN--------PLASTSDFQSVKVEPLIM-------DEAMEQIVEGNPEDFLYETVEETDTGSEDPLHRNDETTLSAAGSPSWTNGEVVR-LADGRGGQCLRCGKGFALFVTAVRHFKLSHFESENLPCPYCQSVMRTKSYLKDHLRR-KH 292 MGS + +CL+WNDF++++S A LREE DFFDV L CD SQ LQAHKVIL+ACS FF++IL++ + H P +YL+GV + + ++L+FMY GEV+V Q +L++FL+VAE+L+VKGL Q D +P P + P A P + PP +P+ P+ S Q V V + D+ + E P+D+ YE E D GS DP + A G+ +VR G G C C H + +H SE CP C +T++ L +H R KH Sbjct: 1 MGSS-EKFCLRWNDFESNISVAFRELREEKDFFDVTLACDDSQ---LQAHKVILSACSPFFRNILRK------NPHQHPLLYLKGVKYKELVSVLNFMYMGEVNVAQEELNSFLSVAEELRVKGLTQNNSSDSAKPEPKSRSRDPPETAPPAKKNRPSVPPPTPSQDDDIQEVIPVKSEPRDQPVPVSQELNHGYQDTGDQGTVALQENYPDDYDYEGYEGYDEGSYDP---STMQATGADGNKESIESMIVRGEPPGTGWHCTVCAYTSPYSTNVRNHVESNHLVSEGHYCPICAKFCKTRNALSNHRHRLKH 301
BLAST of longitudinals lacking vs. nr
Match: gi|1325267175|ref|XP_023340295.1| (zinc finger and BTB domain-containing protein 14-like isoform X6 [Eurytemora affinis]) HSP 1 Score: 170.629 bits (431), Expect = 2.358e-47 Identity = 114/324 (35.19%), Postives = 169/324 (52.16%), Query Frame = 0 Query: 1 MGSDLDNYCLKWNDFQAHVSGACHTLREEADFFDVVLGCDQSQGRTLQAHKVILAACSSFFKDILKQHEASTVSSHTSPFIYLRGVPFTHMAAILDFMYQGEVSVRQTDLSAFLAVAEDLQVKGLAQPG-CDPIQPTPD----ELPAAASPLPNIKLEEPPSSPAN--------PLASTSDFQSVKVEPLIM-------DEAMEQIVEGNPEDFLYETVEETDTGSEDPLHRNDETTLSAAGSPSWTNGEVV-----RLADGRGGQCLRCGKGFALFVTAVRHFKLSHFESENLP------CPYCQSVMRTKSYLKDHLRRKHK 293 MGS + +CL+WNDF++++S A LREE DFFDV L CD SQ LQAHKVIL+ACS FF++IL+++ H P +YL+GV + + ++L+FMY GEV+V Q +L++FL+VAE+L+VKGL Q D +P P + P A P + PP +P+ P+ S Q V V + D+ + E P+D+ YE E D GS DP +T+ A G+ N +++ R D RG C ++ + ++ H + ++LP CP C +KS L+ H R H+ Sbjct: 1 MGSS-EKFCLRWNDFESNISVAFRELREEKDFFDVTLACDDSQ---LQAHKVILSACSPFFRNILRKN------PHQHPLLYLKGVKYKELVSVLNFMYMGEVNVAQEELNSFLSVAEELRVKGLTQNNSSDSAKPEPKSRSRDPPETAPPAKKNRPSVPPPTPSQDDDIQEVIPVKSEPRDQPVPVSQELNHGYQDTGDQGTVALQENYPDDYDYEGYEGYDEGSYDP------STMQATGADG--NKDLIEEMLDRGLDERGTTIFICNS--CVYSSKKKYNVQEHIKVKHLPVQVLVTCPECLQTFHSKSSLRSHKWRFHR 304
BLAST of longitudinals lacking vs. nr
Match: gi|1325267184|ref|XP_023340319.1| (zinc finger and BTB domain-containing protein 14-like isoform X9 [Eurytemora affinis]) HSP 1 Score: 167.548 bits (423), Expect = 3.874e-46 Identity = 113/326 (34.66%), Postives = 164/326 (50.31%), Query Frame = 0 Query: 1 MGSDLDNYCLKWNDFQAHVSGACHTLREEADFFDVVLGCDQSQGRTLQAHKVILAACSSFFKDILKQHEASTVSSHTSPFIYLRGVPFTHMAAILDFMYQGEVSVRQTDLSAFLAVAEDLQVKGLAQPG-CDPIQPTPD----ELPAAASPLPNIKLEEPPSSPAN--------PLASTSDFQSVKVEPLIM-------DEAMEQIVEGNPEDFLYETVEETDTGSEDPLHRNDETTLSAAGSP----------SWTNGEVVRLAD-GRGGQCLRCGKGFALFVTAVRHFKLSHFESENLPCPYCQSVMRTKSYLKDHLRRKHKVY 295 MGS + +CL+WNDF++++S A LREE DFFDV L CD SQ LQAHKVIL+ACS FF++IL+++ H P +YL+GV + + ++L+FMY GEV+V Q +L++FL+VAE+L+VKGL Q D +P P + P A P + PP +P+ P+ S Q V V + D+ + E P+D+ YE E D GS DP +T+ A G+ S V+R D QC C V + H + H + C C ++ +T + + H + HK Y Sbjct: 1 MGSS-EKFCLRWNDFESNISVAFRELREEKDFFDVTLACDDSQ---LQAHKVILSACSPFFRNILRKN------PHQHPLLYLKGVKYKELVSVLNFMYMGEVNVAQEELNSFLSVAEELRVKGLTQNNSSDSAKPEPKSRSRDPPETAPPAKKNRPSVPPPTPSQDDDIQEVIPVKSEPRDQPVPVSQELNHGYQDTGDQGTVALQENYPDDYDYEGYEGYDEGSYDP------STMQATGADGNKEFGDEMLSGMIRNVLRPDDKSYSYQCTTCLYTARKRVAVISHIQSVHLDFPGYTCHLCSTISKTLNAFQQHKLKCHKRY 310
BLAST of longitudinals lacking vs. nr
Match: gi|1325267181|ref|XP_023340311.1| (zinc finger and BTB domain-containing protein 14-like isoform X8 [Eurytemora affinis]) HSP 1 Score: 166.392 bits (420), Expect = 8.859e-46 Identity = 113/324 (34.88%), Postives = 166/324 (51.23%), Query Frame = 0 Query: 1 MGSDLDNYCLKWNDFQAHVSGACHTLREEADFFDVVLGCDQSQGRTLQAHKVILAACSSFFKDILKQHEASTVSSHTSPFIYLRGVPFTHMAAILDFMYQGEVSVRQTDLSAFLAVAEDLQVKGLAQPG-CDPIQPTPD----ELPAAASPLPNIKLEEPPSSPAN--------PLASTSDFQSVKVEPLIM-------DEAMEQIVEGNPEDFLYETVEETDTGSEDPLHRNDETTLSAAGSPSWTNGEVVRLADGRGGQCLRCGKGFAL----FVTAVRHFKLSHFESENLP-------CPYCQSVMRTKSYLKDHLRRKHK 293 MGS + +CL+WNDF++++S A LREE DFFDV L CD SQ LQAHKVIL+ACS FF++IL++ + H P +YL+GV + + ++L+FMY GEV+V Q +L++FL+VAE+L+VKGL Q D +P P + P A P + PP +P+ P+ S Q V V + D+ + E P+D+ YE E D GS DP +T+ A G+ + R D KGF+ F + RH H ES + C YC + +++ L H+ ++H+ Sbjct: 1 MGSS-EKFCLRWNDFESNISVAFRELREEKDFFDVTLACDDSQ---LQAHKVILSACSPFFRNILRK------NPHQHPLLYLKGVKYKELVSVLNFMYMGEVNVAQEELNSFLSVAEELRVKGLTQNNSSDSAKPEPKSRSRDPPETAPPAKKNRPSVPPPTPSQDDDIQEVIPVKSEPRDQPVPVSQELNHGYQDTGDQGTVALQENYPDDYDYEGYEGYDEGSYDP------STMQATGADGNKDLIEEREKDITENIFKDPMKGFSCRLCNFNGSSRHKVFCHIESRHFKDNPLIYTCVYCSRQVNSRNALGVHMSKEHR 308
BLAST of longitudinals lacking vs. nr
Match: gi|1325267165|ref|XP_023340271.1| (zinc finger protein 131-like isoform X3 [Eurytemora affinis]) HSP 1 Score: 165.236 bits (417), Expect = 4.154e-45 Identity = 112/318 (35.22%), Postives = 167/318 (52.52%), Query Frame = 0 Query: 1 MGSDLDNYCLKWNDFQAHVSGACHTLREEADFFDVVLGCDQSQGRTLQAHKVILAACSSFFKDILKQHEASTVSSHTSPFIYLRGVPFTHMAAILDFMYQGEVSVRQTDLSAFLAVAEDLQVKGLAQPG-CDPIQPTPD----ELPAAASPLPNIKLEEPPSSPAN--------PLASTSDFQSVKVEPLIM-------DEAMEQIVEGNPEDFLYETVEETDTGSEDPLHRNDETTLSAAGSPSWTNGEVVRLADGRG-GQ-----CLRCGKGFALFVTAVRHFKLSHFESENLPCPYCQSVMRTKSYLKDHLRRKH 292 MGS + +CL+WNDF++++S A LREE DFFDV L CD SQ LQAHKVIL+ACS FF++IL++ + H P +YL+GV + + ++L+FMY GEV+V Q +L++FL+VAE+L+VKGL Q D +P P + P A P + PP +P+ P+ S Q V V + D+ + E P+D+ YE E D GS DP + A G+ ++T + ++ + G GQ C C ++H + H + L C +C + R + + HLR+KH Sbjct: 1 MGSS-EKFCLRWNDFESNISVAFRELREEKDFFDVTLACDDSQ---LQAHKVILSACSPFFRNILRK------NPHQHPLLYLKGVKYKELVSVLNFMYMGEVNVAQEELNSFLSVAEELRVKGLTQNNSSDSAKPEPKSRSRDPPETAPPAKKNRPSVPPPTPSQDDDIQEVIPVKSEPRDQPVPVSQELNHGYQDTGDQGTVALQENYPDDYDYEGYEGYDEGSYDP---STMQATGADGNKAFTETILDKMYESIGEGQKKVWNCALCPYSREKKDHVMKHVEARHCNLQ-LSC-FCGLMFRRRDVYRQHLRKKH 303
BLAST of longitudinals lacking vs. nr
Match: gi|1325267168|ref|XP_023340278.1| (zinc finger protein 131-like isoform X4 [Eurytemora affinis]) HSP 1 Score: 162.925 bits (411), Expect = 3.098e-44 Identity = 109/318 (34.28%), Postives = 165/318 (51.89%), Query Frame = 0 Query: 1 MGSDLDNYCLKWNDFQAHVSGACHTLREEADFFDVVLGCDQSQGRTLQAHKVILAACSSFFKDILKQHEASTVSSHTSPFIYLRGVPFTHMAAILDFMYQGEVSVRQTDLSAFLAVAEDLQVKGLAQPG-CDPIQPTPD----ELPAAASPLPNIKLEEPPSSPAN--------PLASTSDFQSVKVEPLIM-------DEAMEQIVEGNPEDFLYETVEETDTGSEDPLHRNDETTLSAAGSPSWT--NGEV-VRLAD-GRGGQCLRCGKGFALFVTAVRHFKLSHFESENL-PCPYCQSVMRTKSYLKDHLRRKHK 293 MGS + +CL+WNDF++++S A LREE DFFDV L CD SQ LQAHKVIL+ACS FF++IL++ + H P +YL+GV + + ++L+FMY GEV+V Q +L++FL+VAE+L+VKGL Q D +P P + P A P + PP +P+ P+ S Q V V + D+ + E P+D+ YE E D GS DP +T+ A G+ + EV ++A+ G+G + + H ++ H + + C C R+++ H+ HK Sbjct: 1 MGSS-EKFCLRWNDFESNISVAFRELREEKDFFDVTLACDDSQ---LQAHKVILSACSPFFRNILRK------NPHQHPLLYLKGVKYKELVSVLNFMYMGEVNVAQEELNSFLSVAEELRVKGLTQNNSSDSAKPEPKSRSRDPPETAPPAKKNRPSVPPPTPSQDDDIQEVIPVKSEPRDQPVPVSQELNHGYQDTGDQGTVALQENYPDDYDYEGYEGYDEGSYDP------STMQATGADGNKDFDAEVRAKMANVGQGRWMCQVCDYVSKSTNVYNHVEVKHMTEQMVYSCTVCPKTYRSRNSFNVHMSMTHK 302 The following BLAST results are available for this feature:
BLAST of longitudinals lacking vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 25
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BLAST of longitudinals lacking vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of longitudinals lacking vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
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The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold691_size110934:19119..20363- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold691_size110934-snap-gene-0.34 ID=maker-scaffold691_size110934-snap-gene-0.34|Name=longitudinals lacking|organism=Tigriopus kingsejongensis|type=gene|length=1245bp|location=Sequence derived from alignment at scaffold691_size110934:19119..20363- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'longitudinals lacking' has the following synonyms
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