succinate dehydrogenase flavoprotein subunit, maker-scaffold709_size108516-snap-gene-0.18 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of succinate dehydrogenase flavoprotein subunit vs. L. salmonis genes
Match: EMLSAG00000000264 (supercontig:LSalAtl2s:LSalAtl2s103:974376:978866:-1 gene:EMLSAG00000000264 transcript:EMLSAT00000000264 description:"snap_masked-LSalAtl2s103-processed-gene-10.9") HSP 1 Score: 501.13 bits (1289), Expect = 5.729e-169 Identity = 260/498 (52.21%), Postives = 326/498 (65.46%), Query Frame = 0 Query: 7 ISEQGLSCALLSKVFPTRSHTVSAQGGITVALGNSHEDNWEWHMYDTVKGSDYIGDQNAIEYMCKTGPQSIIELEKMG--------------------LPFSRFEDGSIYQRPFGGQSKAFG-GEQAARTAAAADRTGHALLHTLYQQNIKNKTMIFSEWYALDLVKNQDGAVVGATAMCMESGEICYFKAKATVMATGGAGRIYQSTTNAHINTGDGVGMALRAGVPMQDMEMWQFHPTGIAGAGVLVTEGCRGEGGYLLNKDGERFMERYAPNAKDLAGRDVVARSMMVEIREGRGCDGPWGPHLKLKLDHLGKDVLEARLPGILELSRTFAHIDPIKEPIPVIPTCHYMMGGIPTQISGQAIKQDPNGKDVEIQGLFACGEIASVSVHGANRLGGNSLLDLVVFGRATGLHLGETLAAQVEARDASESDIEASLTRVNRWNSTQKGEDPVQIRKDLQSCMQNNFSVFREGDAMAKGLEELKVIRERLKEARLDDN 483 + ++G A+++K+FPTRSHTV+AQGGI ALGN D+W WHMYDTVKGSD++G Q+AI YM K P ++IELE G +PFSR DG IYQR FGGQS FG G QA R ADRTGH+LLHTLY Q+++ F E++ALDL+ QDG VG AMC+E G I FK+K TV+A GG G+ Y S T+AH TGD M RAG+ QDME QFHPTGI GAG L+TEGCRGEGGYL+N +GERFMERYAP AKDLA RDVV+RSM +EIREGRGC GP H+ L+L HL D L RLPGI E + FA +D +EPIPVIPT HY MGG+PT GQ I +G D + GL+A GE A SVHGANRLG NSLLDLVVFGRA L + E A + ++ EAS+ ++ ++R ++Q MQN+ +VFR G+ M +G+ ++ I ++K+ ++ D+ Sbjct: 73 LVQEGFKTAVITKLFPTRSHTVAAQGGINAALGNMEPDDWRWHMYDTVKGSDWLGXQDAIHYMAKEAPAAVIELENYGNIELNSAFFLLLLSFCMLLGMPFSRTTDGKIYQRAFGGQSYEFGKGGQAHRCCCVADRTGHSLLHTLYGQSLRYDCNYFIEYFALDLLM-QDGECVGVIAMCLEDGSIHRFKSKNTVLAAGGFGKSYFSATSAHTCTGDATAMVTRAGLANQDMEFVQFHPTGIYGAGCLMTEGCRGEGGYLVNSEGERFMERYAPVAKDLASRDVVSRSMTIEIREGRGC-GPEKDHVYLQLHHLPHDQLAQRLPGISETAMIFAGVDVTREPIPVIPTVHYNMGGVPTNFKGQVIGHK-DGSDFIVPGLYAAGETACASVHGANRLGANSLLDLVVFGRACALTIAEEDAPGDKVPALKDNAGEASVANLDSVRYADGSIPTAKLRLNMQKIMQNHAAVFRTGEVMREGIHKMNDIWTQMKDLKVSDH 567
BLAST of succinate dehydrogenase flavoprotein subunit vs. L. salmonis genes
Match: EMLSAG00000005338 (supercontig:LSalAtl2s:LSalAtl2s287:186065:187108:-1 gene:EMLSAG00000005338 transcript:EMLSAT00000005338 description:"maker-LSalAtl2s287-augustus-gene-3.10") HSP 1 Score: 250.751 bits (639), Expect = 3.310e-77 Identity = 121/221 (54.75%), Postives = 156/221 (70.59%), Query Frame = 0 Query: 570 DAPHMKGYALEVPEGSDMMVLDALILLK-EQDPTLSFRRSCREGVCGSDGINMNGKNGLACITPLSALTDKSSIVIRPLPGLPVVRDLIVDLTQFYQNYERVKPYLINDSIPPAREN----LQSPEDRAHLDGLYECIMCACCSTSCPSFWWNPDKFVGPAGLLAAYRWLIDSRDTATEERLSDLDDAFSVFRCHSIMNCVNVCPKGLNPTKAIGHIRSML 785 + P ++ Y + + + M VLDALI +K E DPTL+FRRSCREG+CGS +N+ G N LACIT + K+ I I PLP + VV+DL+ D+ FY+ Y ++P+L + E LQS EDRA LDGLYECI+CACCSTSCPS+WWN D+++GPA L+ AYRW+IDSRD+AT ER+ L D FSV+RCH+IMNC CPKGLNP KAI I+ +L Sbjct: 61 EKPKVQEYKVNLSDCGPM-VLDALIKIKNEIDPTLTFRRSCREGICGSCSMNIGGVNTLACITKIDPNPAKA-IKIYPLPHMYVVKDLVPDMNNFYEQYRSIQPWLQREDESSTSEGNLQILQSVEDRAKLDGLYECILCACCSTSCPSYWWNGDRYLGPAVLMQAYRWMIDSRDSATHERMDKLRDPFSVYRCHTIMNCTKTCPKGLNPGKAIAEIKKLL 279
BLAST of succinate dehydrogenase flavoprotein subunit vs. SwissProt
Match: gi|1148367363|sp|G4V4G6.1|SDHA_SERS3 (RecName: Full=Succinate dehydrogenase flavoprotein subunit) HSP 1 Score: 981.86 bits (2537), Expect = 0.000e+0 Identity = 468/561 (83.42%), Postives = 519/561 (92.51%), Query Frame = 0 Query: 5 LQISEQGLSCALLSKVFPTRSHTVSAQGGITVALGNSHEDNWEWHMYDTVKGSDYIGDQNAIEYMCKTGPQSIIELEKMGLPFSRFEDGSIYQRPFGGQSKAFGGEQAARTAAAADRTGHALLHTLYQQNIKNKTMIFSEWYALDLVKNQDGAVVGATAMCMESGEICYFKAKATVMATGGAGRIYQSTTNAHINTGDGVGMALRAGVPMQDMEMWQFHPTGIAGAGVLVTEGCRGEGGYLLNKDGERFMERYAPNAKDLAGRDVVARSMMVEIREGRGCDGPWGPHLKLKLDHLGKDVLEARLPGILELSRTFAHIDPIKEPIPVIPTCHYMMGGIPTQISGQAIKQDPNGKDVEIQGLFACGEIASVSVHGANRLGGNSLLDLVVFGRATGLHLGETLAAQVEARDASESDIEASLTRVNRWNSTQKGEDPVQIRKDLQSCMQNNFSVFREGDAMAKGLEELKVIRERLKEARLDDNSSEFNTQRIECLELDNLMETAFSTAVAANYRTESRGAHARFDYQERDDENWLCHTIYNPETEAMTKRDVNMTPIHRDTFVPK 565 LQIS+ GLSCALLSKVFPTRSHTVSAQGGITVALGN+HEDNWEWHMYDTVKGSDYIGDQ+AIEYMCKTGP++++ELE MGLPFSR +DGSIYQRPFGGQS+ FGGEQAARTAAAADRTGHALLHTLYQQN+KN T IFSEWYALDLVKNQDGAV+G TA+C+E+GE+ YFKA+ATV+ATGGAGRIYQSTTNAHINTGDGVGMALRAGVP+QDMEMWQFHPTGIAGAGVLVTEGCRGEGGYLLNK GERFMERYAPNAKDLAGRDVVARS+M+EIREGRGCDGPWGPH KLKLDHLGKDVLE+RLPGILELSRTFAH+DP+KEPIPVIPTCHYMMGGIPT+++GQ + + G+DV I GLFA GEIA VSVHGANRLGGNSLLDL+VFGR+ G+HL E+L Q RDAS SDIEASL R+NRWNST+ GEDPV+IRK LQ+CMQ+NFSVFREGDAMAKGLEELKVIRERLK ARLDD S++FNTQRIECLELDNLMETA++TAV+AN+RTESRGAH+RFDY +RDD+ WLCHT+Y P+TE+MT+R VNM P R F PK Sbjct: 24 LQISQMGLSCALLSKVFPTRSHTVSAQGGITVALGNTHEDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAVLELEHMGLPFSRLDDGSIYQRPFGGQSRNFGGEQAARTAAAADRTGHALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVMGCTAICIETGEVVYFKARATVLATGGAGRIYQSTTNAHINTGDGVGMALRAGVPVQDMEMWQFHPTGIAGAGVLVTEGCRGEGGYLLNKHGERFMERYAPNAKDLAGRDVVARSIMIEIREGRGCDGPWGPHAKLKLDHLGKDVLESRLPGILELSRTFAHVDPVKEPIPVIPTCHYMMGGIPTKVTGQVLAVNEQGEDVVIPGLFAVGEIACVSVHGANRLGGNSLLDLIVFGRSAGMHLQESLEEQGATRDASNSDIEASLDRLNRWNSTRSGEDPVEIRKALQACMQHNFSVFREGDAMAKGLEELKVIRERLKNARLDDTSNDFNTQRIECLELDNLMETAYATAVSANFRTESRGAHSRFDYPDRDDDKWLCHTLYQPQTESMTRRKVNMQPKLRPAFPPK 584
BLAST of succinate dehydrogenase flavoprotein subunit vs. SwissProt
Match: gi|21362474|sp|Q8ZQU3.1|SDHA_SALTY (RecName: Full=Succinate dehydrogenase flavoprotein subunit) HSP 1 Score: 963.37 bits (2489), Expect = 0.000e+0 Identity = 469/561 (83.60%), Postives = 516/561 (91.98%), Query Frame = 0 Query: 5 LQISEQGLSCALLSKVFPTRSHTVSAQGGITVALGNSHEDNWEWHMYDTVKGSDYIGDQNAIEYMCKTGPQSIIELEKMGLPFSRFEDGSIYQRPFGGQSKAFGGEQAARTAAAADRTGHALLHTLYQQNIKNKTMIFSEWYALDLVKNQDGAVVGATAMCMESGEICYFKAKATVMATGGAGRIYQSTTNAHINTGDGVGMALRAGVPMQDMEMWQFHPTGIAGAGVLVTEGCRGEGGYLLNKDGERFMERYAPNAKDLAGRDVVARSMMVEIREGRGCDGPWGPHLKLKLDHLGKDVLEARLPGILELSRTFAHIDPIKEPIPVIPTCHYMMGGIPTQISGQAIKQDPNGKDVEIQGLFACGEIASVSVHGANRLGGNSLLDLVVFGRATGLHLGETLAAQVEARDASESDIEASLTRVNRWNSTQKGEDPVQIRKDLQSCMQNNFSVFREGDAMAKGLEELKVIRERLKEARLDDNSSEFNTQRIECLELDNLMETAFSTAVAANYRTESRGAHARFDYQERDDENWLCHTIYNPETEAMTKRDVNMTPIHRDTFVPK 565 LQIS+ G +CALLSKVFPTRSHTVSAQGGITVALGN+HEDNWEWHMYDTVKGSDYIGDQ+AIEYMCKTGP++I+ELE MGLPFSR +DG IYQRPFGGQSK FGGEQAARTAAAADRTGHALLHTLYQQN+KN T IFSEWYALDLVKNQDGAVVG TA+C+E+GE+ YFKA+ATV+ATGGAGRIYQSTTNAHINTGDGVGMALRAGVP+QDMEMWQFHPTGIAGAGVLVTEGCRGEGGYLLNK GERFMERYAPNAKDLAGRDVVARS+M+EIREGRGCDGPWGPH KLKLDHLGK+VLE+RLPGILELSRTFAH+DP+KEPIPVIPTCHYMMGGIPT+++GQA+ + G+DV I GLFA GEIA VSVHGANRLGGNSLLDLVVFGRA GLHL E++A Q RDASESD+E SL R+NRWN+ + GEDPV IRK LQ CMQ+NFSVFREGDAMAKGLE+LKVIRERLK ARLDD SSEFNTQR+ECLELDNLMETA++TAV+AN+RTESRGAH+RFD+ ERDD NWLCHT+Y P+TE+MT+R VNM P R F PK Sbjct: 24 LQISQSGQTCALLSKVFPTRSHTVSAQGGITVALGNTHEDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELEHMGLPFSRLDDGRIYQRPFGGQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGAGRIYQSTTNAHINTGDGVGMALRAGVPVQDMEMWQFHPTGIAGAGVLVTEGCRGEGGYLLNKHGERFMERYAPNAKDLAGRDVVARSIMIEIREGRGCDGPWGPHAKLKLDHLGKEVLESRLPGILELSRTFAHVDPVKEPIPVIPTCHYMMGGIPTKVTGQALTVNEQGEDVVIPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAAGLHLQESIAEQGVLRDASESDVEGSLERLNRWNNNRNGEDPVAIRKALQECMQHNFSVFREGDAMAKGLEQLKVIRERLKNARLDDTSSEFNTQRVECLELDNLMETAYATAVSANFRTESRGAHSRFDFPERDDANWLCHTLYQPQTESMTRRSVNMEPKLRPAFPPK 584
BLAST of succinate dehydrogenase flavoprotein subunit vs. SwissProt
Match: gi|81175271|sp|P0AC43.1|SDHA_ECO57 (RecName: Full=Succinate dehydrogenase flavoprotein subunit >gi|81175272|sp|P0AC42.1|SDHA_ECOL6 RecName: Full=Succinate dehydrogenase flavoprotein subunit >gi|81175273|sp|P0AC41.1|SDHA_ECOLI RecName: Full=Succinate dehydrogenase flavoprotein subunit) HSP 1 Score: 961.829 bits (2485), Expect = 0.000e+0 Identity = 467/561 (83.24%), Postives = 518/561 (92.34%), Query Frame = 0 Query: 5 LQISEQGLSCALLSKVFPTRSHTVSAQGGITVALGNSHEDNWEWHMYDTVKGSDYIGDQNAIEYMCKTGPQSIIELEKMGLPFSRFEDGSIYQRPFGGQSKAFGGEQAARTAAAADRTGHALLHTLYQQNIKNKTMIFSEWYALDLVKNQDGAVVGATAMCMESGEICYFKAKATVMATGGAGRIYQSTTNAHINTGDGVGMALRAGVPMQDMEMWQFHPTGIAGAGVLVTEGCRGEGGYLLNKDGERFMERYAPNAKDLAGRDVVARSMMVEIREGRGCDGPWGPHLKLKLDHLGKDVLEARLPGILELSRTFAHIDPIKEPIPVIPTCHYMMGGIPTQISGQAIKQDPNGKDVEIQGLFACGEIASVSVHGANRLGGNSLLDLVVFGRATGLHLGETLAAQVEARDASESDIEASLTRVNRWNSTQKGEDPVQIRKDLQSCMQNNFSVFREGDAMAKGLEELKVIRERLKEARLDDNSSEFNTQRIECLELDNLMETAFSTAVAANYRTESRGAHARFDYQERDDENWLCHTIYNPETEAMTKRDVNMTPIHRDTFVPK 565 LQIS+ G +CALLSKVFPTRSHTVSAQGGITVALGN+HEDNWEWHMYDTVKGSDYIGDQ+AIEYMCKTGP++I+ELE MGLPFSR +DG IYQRPFGGQSK FGGEQAARTAAAADRTGHALLHTLYQQN+KN T IFSEWYALDLVKNQDGAVVG TA+C+E+GE+ YFKA+ATV+ATGGAGRIYQSTTNAHINTGDGVGMA+RAGVP+QDMEMWQFHPTGIAGAGVLVTEGCRGEGGYLLNK GERFMERYAPNAKDLAGRDVVARS+M+EIREGRGCDGPWGPH KLKLDHLGK+VLE+RLPGILELSRTFAH+DP+KEPIPVIPTCHYMMGGIPT+++GQA+ + G+DV + GLFA GEIA VSVHGANRLGGNSLLDLVVFGRA GLHL E++A Q RDASESD+EASL R+NRWN+ + GEDPV IRK LQ CMQ+NFSVFREGDAMAKGLE+LKVIRERLK ARLDD SSEFNTQR+ECLELDNLMETA++TAV+AN+RTESRGAH+RFD+ +RDDENWLCH++Y PE+E+MT+R VNM P R F PK Sbjct: 24 LQISQSGQTCALLSKVFPTRSHTVSAQGGITVALGNTHEDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELEHMGLPFSRLDDGRIYQRPFGGQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGAGRIYQSTTNAHINTGDGVGMAIRAGVPVQDMEMWQFHPTGIAGAGVLVTEGCRGEGGYLLNKHGERFMERYAPNAKDLAGRDVVARSIMIEIREGRGCDGPWGPHAKLKLDHLGKEVLESRLPGILELSRTFAHVDPVKEPIPVIPTCHYMMGGIPTKVTGQALTVNEKGEDVVVPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAAGLHLQESIAEQGALRDASESDVEASLDRLNRWNNNRNGEDPVAIRKALQECMQHNFSVFREGDAMAKGLEQLKVIRERLKNARLDDTSSEFNTQRVECLELDNLMETAYATAVSANFRTESRGAHSRFDFPDRDDENWLCHSLYLPESESMTRRSVNMEPKLRPAFPPK 584
BLAST of succinate dehydrogenase flavoprotein subunit vs. SwissProt
Match: gi|1706422|sp|P51054.1|SDHA_COXBU (RecName: Full=Succinate dehydrogenase flavoprotein subunit) HSP 1 Score: 707.212 bits (1824), Expect = 0.000e+0 Identity = 335/554 (60.47%), Postives = 414/554 (74.73%), Query Frame = 0 Query: 13 SCALLSKVFPTRSHTVSAQGGITVALGNSHEDNWEWHMYDTVKGSDYIGDQNAIEYMCKTGPQSIIELEKMGLPFSRFEDGSIYQRPFGGQSKAFGGEQAARTAAAADRTGHALLHTLYQQNIKNKTMIFSEWYALDLVKNQDGAVVGATAMCMESGEICYFKAKATVMATGGAGRIYQSTTNAHINTGDGVGMALRAGVPMQDMEMWQFHPTGIAGAGVLVTEGCRGEGGYLLNKDGERFMERYAPNAKDLAGRDVVARSMMVEIREGRGCDGPWGPHLKLKLDHLGKDVLEARLPGILELSRTFAHIDPIKEPIPVIPTCHYMMGGIPTQISGQAIKQDPNGKDVEIQGLFACGEIASVSVHGANRLGGNSLLDLVVFGRATGLHLGETLAAQVEARDASESDIEASLTRVNRWNSTQKGEDPVQIRKDLQSCMQNNFSVFREGDAMAKGLEELKVIRERLKEARLDDNSSEFNTQRIECLELDNLMETAFSTAVAANYRTESRGAHARFDYQERDDENWLCHTIYNPETEAMTKRDVNMTPIHRDTFVPKA 566 A++SKVFPTRSHTVSAQGGI ALGN D WHM+DTVKGSDY+GDQ+AI+YMC+ P S+ ELE GLPFSR +DG IYQR FGG ++ FG E A RT A ADRTGHA+LHTLYQ+N++ T + EWY +DLV+ G + G AM ME+ E+ +FK++AT+ ATGGAGRIY++T+NA+ NTGDG+GM LRAG+P+QDME WQFHPTGI G G L+TEG RGEGGYL+NKDGERFMERY+P+ KDL RDVVARS++ E+ G G GP H+ LKLDHLG+ VL RLPGI+ELS FA++D KEPIP++PTCHYMMGGIPT I GQA+ D NGKD I+GLFA GE A VSVHGANRLG NSLLDLVVFGRA GLHL E L +++ R + DI+A++ R+ RW E+P +R++++ M +F VFRE M +GLE L+ + ERL+ A+L D S FN RIE LELDNLME +++TAV+A RTESRGAH+R+DY+ERDD NWL HT+Y + + R VNM P D F PK+ Sbjct: 34 KVAVVSKVFPTRSHTVSAQGGIAAALGNVVPDKPIWHMFDTVKGSDYLGDQDAIQYMCEQAPPSVYELEHYGLPFSRLDDGRIYQRAFGGHTRDFGKEMARRTCACADRTGHAMLHTLYQKNVEAGTHFYYEWYGIDLVRGAQGGIAGMIAMNMETSELVFFKSRATIFATGGAGRIYETTSNAYTNTGDGIGMVLRAGLPVQDMEFWQFHPTGIYGVGCLITEGARGEGGYLINKDGERFMERYSPHLKDLDCRDVVARSILQEVMAGGGV-GPKKDHVLLKLDHLGEKVLRERLPGIIELSEKFANVDITKEPIPILPTCHYMMGGIPTNIHGQALTVDENGKDQIIEGLFAAGECACVSVHGANRLGTNSLLDLVVFGRAIGLHLEEALKTELKHRSENPDDIDAAIARLKRWEKPNNVENPALLRQEMRKAMSEDFGVFREEQKMKQGLERLQKLNERLQRAKLTDTSRTFNNARIEALELDNLMEVSYATAVSAQQRTESRGAHSRYDYKERDDANWLKHTVYFRDGH-IAYRPVNMKPKGMDPFPPKS 585
BLAST of succinate dehydrogenase flavoprotein subunit vs. SwissProt
Match: gi|20137871|sp|Q92J97.1|SDHA_RICCN (RecName: Full=Succinate dehydrogenase flavoprotein subunit) HSP 1 Score: 588.956 bits (1517), Expect = 0.000e+0 Identity = 289/540 (53.52%), Postives = 380/540 (70.37%), Query Frame = 0 Query: 1 MRAALQISEQGLSCALLSKVFPTRSHTVSAQGGITVALGNSHEDNWEWHMYDTVKGSDYIGDQNAIEYMCKTGPQSIIELEKMGLPFSRFEDGSIYQRPFGGQSKAFG-GEQAARTAAAADRTGHALLHTLYQQNIKNKTMIFSEWYALDLVKNQDGAVVGATAMCMESGEICYFKAKATVMATGGAGRIYQSTTNAHINTGDGVGMALRAGVPMQDMEMWQFHPTGIAGAGVLVTEGCRGEGGYLLNKDGERFMERYAPNAKDLAGRDVVARSMMVEIREGRGCDGPWGPHLKLKLDHLGKDVLEARLPGILELSRTFAHIDPIKEPIPVIPTCHYMMGGIPTQISGQAIKQDPNGKDVEIQGLFACGEIASVSVHGANRLGGNSLLDLVVFGRATGLHLGETLAAQVEARDASESDIEASLTRVNRWNSTQKGEDPVQIRKDLQSCMQNNFSVFREGDAMAKGLEELKVIRERLKEARLDDNSSEFNTQRIECLELDNLMETAFSTAVAANYRTESRGAHARFDYQERDDENWLCHTI 539 +R+A ++++GL+ A ++K+FPTRSHTV+AQGGI+ ALGN ED+W WHMYDTVKGSD++GDQ+AIEYMCK P +I+ELE G+PFSR E+G IYQRPFGG + +G G+ A RT AAADRTGHA+LHTLYQQ++K+K F E++A+DL+ +DG G A ++ G + F+A V+ATGG GR Y S T+AH TGDG GMA+RAG+P+QDME QFHPTGI AG L+TEG RGEGGYL+N +GERFMERYAP AKDLA RDVV+R+M +EIREGRG G H+ L L+HL ++L +RLPGI E ++ FA +D KEPIPV+PT HY MGGIPT GQ I +D + ++GL A GE A VSVHGANRLG NSLLDLVVFGR++ L E + R E +E + R ++ ++R +Q MQ++ SVFR + + +G + IR K+ +++D S +N+ +E LELDNL++ A T +A R ESRGAHAR DY +R+DE+W+ HT+ Sbjct: 24 LRSAFGMAKEGLNTACITKLFPTRSHTVAAQGGISAALGNMGEDDWRWHMYDTVKGSDWLGDQDAIEYMCKNAPDAILELEHYGVPFSRTEEGKIYQRPFGGMTTEYGKGKAAQRTCAAADRTGHAILHTLYQQSLKHKVQFFVEYFAIDLLM-EDGECRGVVAWNLDDGSLHCFRAHNVVLATGGYGRAYFSATSAHTCTGDGGGMAIRAGLPLQDMEFVQFHPTGIYSAGCLITEGARGEGGYLVNANGERFMERYAPAAKDLASRDVVSRAMTIEIREGRGV-GEHKDHVFLHLNHLSPEILHSRLPGISETAKIFAGVDVTKEPIPVLPTVHYNMGGIPTNYHGQVIIKDGKNHNSVVKGLMAIGEAACVSVHGANRLGSNSLLDLVVFGRSSALKAAELIKPASPHRSIKEESLEKIINRFDKVRHANGNILVAELRLKMQRTMQSHASVFRTQEVLDEGAGMISEIRSGYKDIKINDKSLIWNSDLVEALELDNLLDQALVTVYSAAARKESRGAHAREDYPDRNDEDWMKHTL 561
BLAST of succinate dehydrogenase flavoprotein subunit vs. SwissProt
Match: gi|75535803|sp|Q4UJM1.1|SDHA_RICFE (RecName: Full=Succinate dehydrogenase flavoprotein subunit) HSP 1 Score: 583.563 bits (1503), Expect = 0.000e+0 Identity = 286/540 (52.96%), Postives = 379/540 (70.19%), Query Frame = 0 Query: 1 MRAALQISEQGLSCALLSKVFPTRSHTVSAQGGITVALGNSHEDNWEWHMYDTVKGSDYIGDQNAIEYMCKTGPQSIIELEKMGLPFSRFEDGSIYQRPFGGQSKAFG-GEQAARTAAAADRTGHALLHTLYQQNIKNKTMIFSEWYALDLVKNQDGAVVGATAMCMESGEICYFKAKATVMATGGAGRIYQSTTNAHINTGDGVGMALRAGVPMQDMEMWQFHPTGIAGAGVLVTEGCRGEGGYLLNKDGERFMERYAPNAKDLAGRDVVARSMMVEIREGRGCDGPWGPHLKLKLDHLGKDVLEARLPGILELSRTFAHIDPIKEPIPVIPTCHYMMGGIPTQISGQAIKQDPNGKDVEIQGLFACGEIASVSVHGANRLGGNSLLDLVVFGRATGLHLGETLAAQVEARDASESDIEASLTRVNRWNSTQKGEDPVQIRKDLQSCMQNNFSVFREGDAMAKGLEELKVIRERLKEARLDDNSSEFNTQRIECLELDNLMETAFSTAVAANYRTESRGAHARFDYQERDDENWLCHTI 539 +R+A ++++GL+ A ++K+FPTRSHTV+AQGGI+ ALGN ED+W WHMYDTVKGSD++GDQ+AIEYMCK P +I+ELE G+PFSR E+G IYQRPFGG + +G G+ A RT AAADRTGHA+LHTLYQQ++K+K F E++A+DL+ +DG G ++ G + F+A V+ATGG GR Y S T+AH TGDG GMA+RAG+P+QDME QFHPTGI AG L+TEG RGEGGYL+N +GERFMERYAP AKDLA RDVV+R+M +EIREGRG G H+ L L+HL ++L +RLPGI E ++ FA +D KEPIPV+PT HY MGGIPT GQ I +D + ++GL A GE A VSVHGANRLG NSLLDLVVFGR++ L E ++ + E+ +E + R ++ +R +Q MQ++ SVFR + + +G + IR K+ +++D S +N+ +E LELDNL++ A T +A R ESRGAHAR DY +R+D +W+ HT+ Sbjct: 24 LRSAFGMAKEGLNTACITKLFPTRSHTVAAQGGISAALGNMGEDDWRWHMYDTVKGSDWLGDQDAIEYMCKNAPDAILELEHYGVPFSRTEEGKIYQRPFGGMTTEYGKGKAAQRTCAAADRTGHAILHTLYQQSLKHKVQFFVEYFAIDLLM-EDGECRGVVVWNLDDGTLHCFRAHNVVLATGGYGRAYFSATSAHTCTGDGGGMAIRAGLPLQDMEFVQFHPTGIYSAGCLITEGARGEGGYLVNANGERFMERYAPAAKDLASRDVVSRAMTIEIREGRGV-GEHKDHVFLHLNHLSPEILHSRLPGISETAKIFAGVDVTKEPIPVLPTVHYNMGGIPTNYHGQVIIKDGTNHNSVVKGLMAIGEAACVSVHGANRLGSNSLLDLVVFGRSSALKAAELISPASPHKPIKEASLEKIINRFDKVRHANGNILVADLRLKMQRTMQSHASVFRTQEVLDEGAGMISEIRNGYKDIKINDKSLIWNSDLVEALELDNLLDQALVTVYSAAARKESRGAHAREDYPDRNDGDWMKHTL 561
BLAST of succinate dehydrogenase flavoprotein subunit vs. SwissProt
Match: gi|81826335|sp|Q68XN9.1|SDHA_RICTY (RecName: Full=Succinate dehydrogenase flavoprotein subunit) HSP 1 Score: 583.563 bits (1503), Expect = 0.000e+0 Identity = 285/540 (52.78%), Postives = 377/540 (69.81%), Query Frame = 0 Query: 1 MRAALQISEQGLSCALLSKVFPTRSHTVSAQGGITVALGNSHEDNWEWHMYDTVKGSDYIGDQNAIEYMCKTGPQSIIELEKMGLPFSRFEDGSIYQRPFGGQSKAFG-GEQAARTAAAADRTGHALLHTLYQQNIKNKTMIFSEWYALDLVKNQDGAVVGATAMCMESGEICYFKAKATVMATGGAGRIYQSTTNAHINTGDGVGMALRAGVPMQDMEMWQFHPTGIAGAGVLVTEGCRGEGGYLLNKDGERFMERYAPNAKDLAGRDVVARSMMVEIREGRGCDGPWGPHLKLKLDHLGKDVLEARLPGILELSRTFAHIDPIKEPIPVIPTCHYMMGGIPTQISGQAIKQDPNGKDVEIQGLFACGEIASVSVHGANRLGGNSLLDLVVFGRATGLHLGETLAAQVEARDASESDIEASLTRVNRWNSTQKGEDPVQIRKDLQSCMQNNFSVFREGDAMAKGLEELKVIRERLKEARLDDNSSEFNTQRIECLELDNLMETAFSTAVAANYRTESRGAHARFDYQERDDENWLCHTI 539 +R+A ++++GL+ A ++K+FPTRSHTV+AQGGI+ ALGN ED+W WHMYDTVKGSD++GDQ+AIEYMCK P +I+ELE G+PFSR EDG IYQRPFGG + +G G+ A RT AAADRTGHA+LHTLYQQ++K+K F E++A+DL+ +DG G A ++ G + F+A V+ATGG GR Y S T+AH TGDG GM +RAG+P+QDME QFHPTGI AG L+TEG RGEGGYL+N +GERFMERYAP AKDLA RDVV+R+M +EIREGRG G + H+ L L+HL ++L RLPGI E ++ FA +D K+PIPV+PT HY MGGIPT GQ I +D + + G+ A GE A VSVHGANRLG NSLLDLVVFGR++ L E + + + +E + R ++ +R +Q MQ++ SVFR + + +G + IR R K+ +++D S +N+ +E LELDNL++ A T +A R ESRGAHAR DY +R+D +W+ HT+ Sbjct: 24 LRSAFGMAKEGLNTACITKIFPTRSHTVAAQGGISAALGNMGEDDWRWHMYDTVKGSDWLGDQDAIEYMCKNAPDAILELEHYGVPFSRTEDGKIYQRPFGGMTTEYGKGKAAQRTCAAADRTGHAILHTLYQQSLKHKVQFFIEYFAIDLLM-EDGECRGVVAWNLDDGSLHCFRAHNVVLATGGYGRAYFSATSAHTCTGDGGGMVIRAGLPLQDMEFVQFHPTGIYSAGCLITEGARGEGGYLVNANGERFMERYAPAAKDLASRDVVSRAMTIEIREGRGV-GEYKDHVFLHLNHLSPEILHRRLPGISETAKIFAGVDVTKDPIPVLPTVHYNMGGIPTNYHGQVIIKDGKNHNSIVNGIMAIGEAACVSVHGANRLGSNSLLDLVVFGRSSALKAAELIKPVSPHKPLKKEILEKIINRFDKIRHANGNVLVADLRLQMQRTMQSHVSVFRTQELLDEGARMISEIRNRYKDIKINDKSLIWNSDLVEALELDNLLDQALVTVYSAAARKESRGAHAREDYPDRNDIDWIKHTL 561
BLAST of succinate dehydrogenase flavoprotein subunit vs. SwissProt
Match: gi|122425298|sp|Q1RHB9.1|SDHA_RICBR (RecName: Full=Succinate dehydrogenase flavoprotein subunit) HSP 1 Score: 582.022 bits (1499), Expect = 0.000e+0 Identity = 285/534 (53.37%), Postives = 376/534 (70.41%), Query Frame = 0 Query: 7 ISEQGLSCALLSKVFPTRSHTVSAQGGITVALGNSHEDNWEWHMYDTVKGSDYIGDQNAIEYMCKTGPQSIIELEKMGLPFSRFEDGSIYQRPFGGQSKAFG-GEQAARTAAAADRTGHALLHTLYQQNIKNKTMIFSEWYALDLVKNQDGAVVGATAMCMESGEICYFKAKATVMATGGAGRIYQSTTNAHINTGDGVGMALRAGVPMQDMEMWQFHPTGIAGAGVLVTEGCRGEGGYLLNKDGERFMERYAPNAKDLAGRDVVARSMMVEIREGRGCDGPWGPHLKLKLDHLGKDVLEARLPGILELSRTFAHIDPIKEPIPVIPTCHYMMGGIPTQISGQAIKQDPNGKDVEIQGLFACGEIASVSVHGANRLGGNSLLDLVVFGRATGLHLGETLAAQVEARDASESDIEASLTRVNRWNSTQKGEDPVQIRKDLQSCMQNNFSVFREGDAMAKGLEELKVIRERLKEARLDDNSSEFNTQRIECLELDNLMETAFSTAVAANYRTESRGAHARFDYQERDDENWLCHTI 539 ++E+GL+ A +SK+FPTRSHTV+AQGGI+ ALGN D+W WHMYDTVKGSD++GDQ+AIEYMCK P +I+ELE G+PFSR E+G IYQRPFGG + +G G+ A RT AAADRTGHA+LHTLYQQ++K+K F E++A+DL+ ++G G A ++ G + F+A V+ATGG GR Y S T+AH TGDG GMA+RAG+P+QDME QFHPTGI AG L+TEG RGEGGYL+N +GERFMERYAP AKDLA RDVV+R+M +EIREGRG G H+ L L+HL +++ +RLPGI E ++ FA +D KEPIPV+PT HY MGGIPT GQ I +D + ++GL + GE A VSVHGANRLG NSLLDLVVFGR+ L E + + SE +E ++R ++ + +R +Q MQ++ SVFR + + +G E + IR K+ +++D S +N+ +E LELDNL++ A T +A R ESRGAHAR DY +R+D+ W+ HT+ Sbjct: 30 MAEEGLNTACISKLFPTRSHTVAAQGGISAALGNMGADDWRWHMYDTVKGSDWLGDQDAIEYMCKNAPDAILELEHYGVPFSRTEEGKIYQRPFGGMTTEYGKGKAAQRTCAAADRTGHAILHTLYQQSLKHKVQFFIEYFAIDLLM-ENGECRGVVAWNLDDGSLHCFRAHNVVLATGGYGRAYFSATSAHTCTGDGGGMAIRAGLPLQDMEFVQFHPTGIYSAGCLITEGARGEGGYLVNANGERFMERYAPAAKDLASRDVVSRAMTIEIREGRGV-GEHKDHVFLHLNHLSPEIVHSRLPGISETAKIFAGVDVTKEPIPVLPTVHYNMGGIPTNYHGQVIIKDGKNHNSVVKGLMSIGEAACVSVHGANRLGSNSLLDLVVFGRSAALKAAELIKPASPHKPVSEEALEKIISRFDKIRHSSGNISVADLRLKMQRTMQSHASVFRTQEVLDEGAEMISEIRSGYKDIKVNDKSLIWNSDLVEALELDNLLDQALVTVYSAAARKESRGAHAREDYPDRNDKEWMQHTL 561
BLAST of succinate dehydrogenase flavoprotein subunit vs. SwissProt
Match: gi|31076658|sp|Q9UTJ7.1|SDHA_SCHPO (RecName: Full=Probable succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; AltName: Full=Flavoprotein subunit of complex II; Short=FP; Flags: Precursor) HSP 1 Score: 581.252 bits (1497), Expect = 0.000e+0 Identity = 291/540 (53.89%), Postives = 375/540 (69.44%), Query Frame = 0 Query: 1 MRAALQISEQGLSCALLSKVFPTRSHTVSAQGGITVALGNSHEDNWEWHMYDTVKGSDYIGDQNAIEYMCKTGPQSIIELEKMGLPFSRFEDGSIYQRPFGGQSKAFG-GEQAARTAAAADRTGHALLHTLYQQNIKNKTMIFSEWYALDLVKNQDGAVVGATAMCMESGEICYFKAKATVMATGGAGRIYQSTTNAHINTGDGVGMALRAGVPMQDMEMWQFHPTGIAGAGVLVTEGCRGEGGYLLNKDGERFMERYAPNAKDLAGRDVVARSMMVEIREGRGCDGPWGPHLKLKLDHLGKDVLEARLPGILELSRTFAHIDPIKEPIPVIPTCHYMMGGIPTQISGQAIKQDPNGKDVEIQGLFACGEIASVSVHGANRLGGNSLLDLVVFGRATGLHLGETLAAQVEARDASESDIEASLTRVNRWNSTQKGEDPVQIRKDLQSCMQNNFSVFREGDAMAKGLEELKVIRERLKEARLDDNSSEFNTQRIECLELDNLMETAFSTAVAANYRTESRGAHARFDYQERDDENWLCHTI 539 +RA ++E G + A ++K+FPTRSHTV+AQGGI ALGN +D+W WH YDTVKGSD++GDQ+AI YM K P++++ELE G+PFSR ++G IYQR FGGQS +G G QA R AA ADRTGH++LHTLY Q++K+ T F E++A+DL+ + G G AM +E G I F+A T++ATGG GR Y S T+AH TGDG M RAG+P+QD+E QFHPTGI GAG L+TEGCRGEGGYLLN GERFMERYAP AKDLA RDVV+R+M VEIREGRG GP H L+L HL ++L+ RLPGI E + FA +D KEPIPV+PT HY MGGIPT+ +G+ + D NGKD + GL+A GE A VSVHG NRLG NSLLD+VVFGRA LH+ +TL + + SL +++ ++Q + +IR D+Q MQ + SVFR + + +G++ + + K+ + D +NT +E LEL NL+ A TA AA R ESRGAHAR DY ERDD+NW+ HT+ Sbjct: 67 LRATFGLAEAGFNTACITKLFPTRSHTVAAQGGINAALGNMTKDDWRWHFYDTVKGSDWLGDQDAIHYMTKEAPKAVLELEHFGVPFSRTKEGKIYQRAFGGQSLEYGKGGQAYRCAAVADRTGHSILHTLYGQSLKHNTNFFIEYFAMDLIM-EGGECRGVIAMNLEDGSIHRFRAHKTILATGGYGRAYFSCTSAHTCTGDGNAMVSRAGLPLQDLEFVQFHPTGIYGAGCLITEGCRGEGGYLLNSKGERFMERYAPTAKDLASRDVVSRAMTVEIREGRGV-GPEKDHCYLQLSHLPAEILKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTRFTGEVLTIDENGKDKIVPGLYAAGEAACVSVHGGNRLGANSLLDIVVFGRACALHIKDTLEPNTPHKPLAADAGLDSLKFLDQIRTSQGPKHTSEIRLDMQKTMQRDVSVFRMEETLQEGVKNIARVDGTYKDIGIRDRGLIWNTDLVEALELRNLLTCAVQTANAALNRKESRGAHAREDYPERDDKNWIKHTL 604
BLAST of succinate dehydrogenase flavoprotein subunit vs. SwissProt
Match: gi|399372|sp|P31038.1|SDHA_RICPR (RecName: Full=Succinate dehydrogenase flavoprotein subunit) HSP 1 Score: 579.326 bits (1492), Expect = 0.000e+0 Identity = 284/540 (52.59%), Postives = 375/540 (69.44%), Query Frame = 0 Query: 1 MRAALQISEQGLSCALLSKVFPTRSHTVSAQGGITVALGNSHEDNWEWHMYDTVKGSDYIGDQNAIEYMCKTGPQSIIELEKMGLPFSRFEDGSIYQRPFGGQSKAFG-GEQAARTAAAADRTGHALLHTLYQQNIKNKTMIFSEWYALDLVKNQDGAVVGATAMCMESGEICYFKAKATVMATGGAGRIYQSTTNAHINTGDGVGMALRAGVPMQDMEMWQFHPTGIAGAGVLVTEGCRGEGGYLLNKDGERFMERYAPNAKDLAGRDVVARSMMVEIREGRGCDGPWGPHLKLKLDHLGKDVLEARLPGILELSRTFAHIDPIKEPIPVIPTCHYMMGGIPTQISGQAIKQDPNGKDVEIQGLFACGEIASVSVHGANRLGGNSLLDLVVFGRATGLHLGETLAAQVEARDASESDIEASLTRVNRWNSTQKGEDPVQIRKDLQSCMQNNFSVFREGDAMAKGLEELKVIRERLKEARLDDNSSEFNTQRIECLELDNLMETAFSTAVAANYRTESRGAHARFDYQERDDENWLCHTI 539 +R+A ++++GL+ A ++K+FPTRSHTV+AQGGI+ ALGN ED+W WHMYDTVKGSD++GDQ+AIEYMCK P +I+ELE G+PFSR DG IYQRPFGG + +G G+ A RT AAADRTGHA+LHTLYQQ++K+K F E++A+DL+ +DG G A ++ G + F+A V+ATGG GR Y S T+AH TGDG GM +RAG+P+QDME QFHPTGI AG L+TEG RGEGGYL+N +GERFMERYAP AKDLA RDVV+R+M +EIREGRG G H+ L L+HL ++L RLPGI E ++ FA +D K+PIPV+PT HY MGGIPT GQ I +D + + G+ A GE A VSVHGANRLG NSLLDLVVFGR++ L E + + + +E + R ++ +R +Q MQ++ SVFR + +G+ + IR R K+ +++D S +N+ +E LELDNL++ A T +A R ESRGAHAR DY +R+D +W+ HT+ Sbjct: 24 LRSAFGMAKEGLNTACITKIFPTRSHTVAAQGGISAALGNMGEDDWRWHMYDTVKGSDWLGDQDAIEYMCKNAPDAILELEHYGVPFSRTVDGKIYQRPFGGMTTEYGKGKAAQRTCAAADRTGHAILHTLYQQSLKHKVQFFIEYFAIDLLM-EDGECRGVVAWNLDDGSLHCFRAHNVVLATGGYGRAYFSATSAHTCTGDGGGMVIRAGLPLQDMEFVQFHPTGIYSAGCLITEGARGEGGYLVNANGERFMERYAPAAKDLASRDVVSRAMTIEIREGRGV-GEHKDHVFLHLNHLSPEILHRRLPGISETAKIFAGVDVTKDPIPVLPTVHYNMGGIPTNYQGQVIIKDGKNHNSIVNGIMAIGEAACVSVHGANRLGSNSLLDLVVFGRSSALKAAELIKPASPHKPLQKETLEKIINRFDKVRYANGNILVADLRLKMQRTMQSHVSVFRTQKLLDEGVGMISEIRNRYKDIKINDKSLIWNSDLVEALELDNLLDQALVTVCSAAARKESRGAHAREDYPDRNDRDWIKHTL 561
BLAST of succinate dehydrogenase flavoprotein subunit vs. nr
Match: gi|1149066345|ref|WP_077649055.1| (succinate dehydrogenase flavoprotein subunit [Salinivibrio kushneri] >gi|1146119583|gb|OOE70912.1| succinate dehydrogenase flavoprotein subunit [Salinivibrio kushneri]) HSP 1 Score: 1077.39 bits (2785), Expect = 0.000e+0 Identity = 512/561 (91.27%), Postives = 546/561 (97.33%), Query Frame = 0 Query: 5 LQISEQGLSCALLSKVFPTRSHTVSAQGGITVALGNSHEDNWEWHMYDTVKGSDYIGDQNAIEYMCKTGPQSIIELEKMGLPFSRFEDGSIYQRPFGGQSKAFGGEQAARTAAAADRTGHALLHTLYQQNIKNKTMIFSEWYALDLVKNQDGAVVGATAMCMESGEICYFKAKATVMATGGAGRIYQSTTNAHINTGDGVGMALRAGVPMQDMEMWQFHPTGIAGAGVLVTEGCRGEGGYLLNKDGERFMERYAPNAKDLAGRDVVARSMMVEIREGRGCDGPWGPHLKLKLDHLGKDVLEARLPGILELSRTFAHIDPIKEPIPVIPTCHYMMGGIPTQISGQAIKQDPNGKDVEIQGLFACGEIASVSVHGANRLGGNSLLDLVVFGRATGLHLGETLAAQVEARDASESDIEASLTRVNRWNSTQKGEDPVQIRKDLQSCMQNNFSVFREGDAMAKGLEELKVIRERLKEARLDDNSSEFNTQRIECLELDNLMETAFSTAVAANYRTESRGAHARFDYQERDDENWLCHTIYNPETEAMTKRDVNMTPIHRDTFVPK 565 LQISEQGL+CALLSKVFPTRSHTVSAQGGITVALGNSH+DNW+WHMYDTVKGSDYIGDQ+AIEYMCKTGPQS+IELEKMGLPFSRFE+GSIYQRPFGGQSK FGGEQAARTAAAADRTGHALLHTLYQQNIKNKT IFSEWYALDLVKNQDG +VGATAMCME+GEICYFK+KATV+ATGGAGRIYQSTTNAHINTGDGVGMALRAGVPMQDMEMWQFHPTGIAGAGVLVTEGCRGEGGYLLNKDGERFMERYAPN KDLAGRDVVARSMM+EIREGRGCDGPWGPHLKLKLDHLGKDVLE+RLPGIL+LSRTFAH+DPIKEPIPVIPTCHYMMGGIPTQ+SGQAIKQDP G D+E+QGLFACGEIASVSVHGANRLGGNSLLDLVVFGRATGLHLGETLAAQVEARDASESDIEASL RVNRWNSTQ+GEDPV+IRKDLQ+CMQ NFSVFREG+AM KGL+ELK IRERLK ARLDD S+EFNTQR+ECLEL+NLMETA+STAV+A+YRTESRGAHARFDYQ+RDD+NWLCH+IYNPETEAM+KRDVNM P+HR+ F PK Sbjct: 24 LQISEQGLTCALLSKVFPTRSHTVSAQGGITVALGNSHKDNWQWHMYDTVKGSDYIGDQDAIEYMCKTGPQSVIELEKMGLPFSRFENGSIYQRPFGGQSKEFGGEQAARTAAAADRTGHALLHTLYQQNIKNKTTIFSEWYALDLVKNQDGVIVGATAMCMETGEICYFKSKATVLATGGAGRIYQSTTNAHINTGDGVGMALRAGVPMQDMEMWQFHPTGIAGAGVLVTEGCRGEGGYLLNKDGERFMERYAPNVKDLAGRDVVARSMMIEIREGRGCDGPWGPHLKLKLDHLGKDVLESRLPGILDLSRTFAHVDPIKEPIPVIPTCHYMMGGIPTQVSGQAIKQDPLGNDIEVQGLFACGEIASVSVHGANRLGGNSLLDLVVFGRATGLHLGETLAAQVEARDASESDIEASLARVNRWNSTQQGEDPVEIRKDLQACMQENFSVFREGEAMEKGLKELKEIRERLKSARLDDTSTEFNTQRVECLELENLMETAYSTAVSAHYRTESRGAHARFDYQDRDDKNWLCHSIYNPETEAMSKRDVNMAPVHREAFPPK 584
BLAST of succinate dehydrogenase flavoprotein subunit vs. nr
Match: gi|1149339904|ref|WP_077774642.1| (succinate dehydrogenase flavoprotein subunit [Salinivibrio sp. MA427] >gi|1146157219|gb|OOF07600.1| succinate dehydrogenase flavoprotein subunit [Salinivibrio sp. MA427]) HSP 1 Score: 1077 bits (2784), Expect = 0.000e+0 Identity = 513/562 (91.28%), Postives = 544/562 (96.80%), Query Frame = 0 Query: 5 LQISEQGLSCALLSKVFPTRSHTVSAQGGITVALGNSHEDNWEWHMYDTVKGSDYIGDQNAIEYMCKTGPQSIIELEKMGLPFSRFEDGSIYQRPFGGQSKAFGGEQAARTAAAADRTGHALLHTLYQQNIKNKTMIFSEWYALDLVKNQDGAVVGATAMCMESGEICYFKAKATVMATGGAGRIYQSTTNAHINTGDGVGMALRAGVPMQDMEMWQFHPTGIAGAGVLVTEGCRGEGGYLLNKDGERFMERYAPNAKDLAGRDVVARSMMVEIREGRGCDGPWGPHLKLKLDHLGKDVLEARLPGILELSRTFAHIDPIKEPIPVIPTCHYMMGGIPTQISGQAIKQDPNGKDVEIQGLFACGEIASVSVHGANRLGGNSLLDLVVFGRATGLHLGETLAAQVEARDASESDIEASLTRVNRWNSTQKGEDPVQIRKDLQSCMQNNFSVFREGDAMAKGLEELKVIRERLKEARLDDNSSEFNTQRIECLELDNLMETAFSTAVAANYRTESRGAHARFDYQERDDENWLCHTIYNPETEAMTKRDVNMTPIHRDTFVPKA 566 LQISEQGL+CALLSKVFPTRSHTVSAQGGITVALGNSH+DNW+WHMYDTVKGSDYIGDQ+AIEYMCKTGPQS+IELEKMGLPFSRFEDGSIYQRPFGGQSK FGGEQAARTAAAADRTGHALLHTLYQQNIKNKT IFSEWYALDLVKNQDG +VGATAMCME+GEICYFK+KATV+ATGGAGRIYQSTTNAHINTGDGVGMALRAGVPMQDMEMWQFHPTGIAGAGVLVTEGCRGEGGYLLNKDGERFMERYAPNAKDLAGRDVVARSMM+EIREGRGC+GPWGPH+KLKLDHLGKDVLE+RLPGIL+L RTFAH+DPIKEPIPVIPTCHYMMGGIPTQ+SGQAIKQDP G D+E+QGLFACGEIASVSVHGANRLGGNSLLDLVVFGRATGLHLGETLAAQVEARDASESDIEASL RVNRWNSTQ+GEDPV+IRKDLQ+CMQ NFSVFREG+AM KGL+EL IRERLK ARLDD S+EFNTQR+ECLEL+NLMETA+STAV+A YRTESRGAHARFDYQERDDENWLCH+IYNPETE M+KRDVNM P+HRD F PKA Sbjct: 24 LQISEQGLTCALLSKVFPTRSHTVSAQGGITVALGNSHKDNWQWHMYDTVKGSDYIGDQDAIEYMCKTGPQSVIELEKMGLPFSRFEDGSIYQRPFGGQSKEFGGEQAARTAAAADRTGHALLHTLYQQNIKNKTTIFSEWYALDLVKNQDGVIVGATAMCMETGEICYFKSKATVLATGGAGRIYQSTTNAHINTGDGVGMALRAGVPMQDMEMWQFHPTGIAGAGVLVTEGCRGEGGYLLNKDGERFMERYAPNAKDLAGRDVVARSMMIEIREGRGCEGPWGPHIKLKLDHLGKDVLESRLPGILDLXRTFAHVDPIKEPIPVIPTCHYMMGGIPTQVSGQAIKQDPLGNDIEVQGLFACGEIASVSVHGANRLGGNSLLDLVVFGRATGLHLGETLAAQVEARDASESDIEASLARVNRWNSTQQGEDPVEIRKDLQACMQENFSVFREGEAMEKGLKELDAIRERLKTARLDDTSTEFNTQRVECLELENLMETAYSTAVSAYYRTESRGAHARFDYQERDDENWLCHSIYNPETETMSKRDVNMAPVHRDAFPPKA 585
BLAST of succinate dehydrogenase flavoprotein subunit vs. nr
Match: gi|1330609111|ref|WP_102505585.1| (succinate dehydrogenase flavoprotein subunit [Salinivibrio costicola]) HSP 1 Score: 1076.62 bits (2783), Expect = 0.000e+0 Identity = 512/561 (91.27%), Postives = 546/561 (97.33%), Query Frame = 0 Query: 5 LQISEQGLSCALLSKVFPTRSHTVSAQGGITVALGNSHEDNWEWHMYDTVKGSDYIGDQNAIEYMCKTGPQSIIELEKMGLPFSRFEDGSIYQRPFGGQSKAFGGEQAARTAAAADRTGHALLHTLYQQNIKNKTMIFSEWYALDLVKNQDGAVVGATAMCMESGEICYFKAKATVMATGGAGRIYQSTTNAHINTGDGVGMALRAGVPMQDMEMWQFHPTGIAGAGVLVTEGCRGEGGYLLNKDGERFMERYAPNAKDLAGRDVVARSMMVEIREGRGCDGPWGPHLKLKLDHLGKDVLEARLPGILELSRTFAHIDPIKEPIPVIPTCHYMMGGIPTQISGQAIKQDPNGKDVEIQGLFACGEIASVSVHGANRLGGNSLLDLVVFGRATGLHLGETLAAQVEARDASESDIEASLTRVNRWNSTQKGEDPVQIRKDLQSCMQNNFSVFREGDAMAKGLEELKVIRERLKEARLDDNSSEFNTQRIECLELDNLMETAFSTAVAANYRTESRGAHARFDYQERDDENWLCHTIYNPETEAMTKRDVNMTPIHRDTFVPK 565 LQISEQGL+CALLSKVFPTRSHTVSAQGGITVALGNSH+DNW+WHMYDTVKGSDYIGDQ+AIEYMCKTGPQS+IELEKMGLPFSRFE+GSIYQRPFGGQSK FGGEQAARTAAAADRTGHALLHTLYQQNIKNKT IFSEWYALDLVKNQDG +VGATAMCME+GEICYFK+KATV+ATGGAGRIYQSTTNAHINTGDGVG+ALRAGVPMQDMEMWQFHPTGIAGAGVLVTEGCRGEGGYLLNKDGERFMERYAPN KDLAGRDVVARSMM+EIREGRGCDGPWGPHLKLKLDHLGKDVLE+RLPGIL+LSRTFAH+DPIKEPIPVIPTCHYMMGGIPTQ+SGQAIKQDP G D+E+QGLFACGEIASVSVHGANRLGGNSLLDLVVFGRATGLHLGETLAAQVEARDASESDIEASL RVNRWNSTQ+GEDPV+IRKDLQ+CMQ NFSVFREG+AM KGL+ELK IRERLK ARLDD S+EFNTQR+ECLEL+NLMETA+STAV+A+YRTESRGAHARFDYQ+RDDENWLCH+IYNPETEAM+KRDVNM P+HR+ F PK Sbjct: 24 LQISEQGLTCALLSKVFPTRSHTVSAQGGITVALGNSHKDNWQWHMYDTVKGSDYIGDQDAIEYMCKTGPQSVIELEKMGLPFSRFENGSIYQRPFGGQSKEFGGEQAARTAAAADRTGHALLHTLYQQNIKNKTTIFSEWYALDLVKNQDGVIVGATAMCMETGEICYFKSKATVLATGGAGRIYQSTTNAHINTGDGVGIALRAGVPMQDMEMWQFHPTGIAGAGVLVTEGCRGEGGYLLNKDGERFMERYAPNVKDLAGRDVVARSMMIEIREGRGCDGPWGPHLKLKLDHLGKDVLESRLPGILDLSRTFAHVDPIKEPIPVIPTCHYMMGGIPTQVSGQAIKQDPLGNDIEVQGLFACGEIASVSVHGANRLGGNSLLDLVVFGRATGLHLGETLAAQVEARDASESDIEASLARVNRWNSTQQGEDPVEIRKDLQACMQENFSVFREGEAMEKGLKELKEIRERLKSARLDDTSTEFNTQRVECLELENLMETAYSTAVSAHYRTESRGAHARFDYQDRDDENWLCHSIYNPETEAMSKRDVNMAPVHREAFPPK 584
BLAST of succinate dehydrogenase flavoprotein subunit vs. nr
Match: gi|1148886941|ref|WP_077599326.1| (succinate dehydrogenase flavoprotein subunit [Salinivibrio kushneri] >gi|1146103940|gb|OOE55710.1| succinate dehydrogenase flavoprotein subunit [Salinivibrio kushneri]) HSP 1 Score: 1076.62 bits (2783), Expect = 0.000e+0 Identity = 512/561 (91.27%), Postives = 545/561 (97.15%), Query Frame = 0 Query: 5 LQISEQGLSCALLSKVFPTRSHTVSAQGGITVALGNSHEDNWEWHMYDTVKGSDYIGDQNAIEYMCKTGPQSIIELEKMGLPFSRFEDGSIYQRPFGGQSKAFGGEQAARTAAAADRTGHALLHTLYQQNIKNKTMIFSEWYALDLVKNQDGAVVGATAMCMESGEICYFKAKATVMATGGAGRIYQSTTNAHINTGDGVGMALRAGVPMQDMEMWQFHPTGIAGAGVLVTEGCRGEGGYLLNKDGERFMERYAPNAKDLAGRDVVARSMMVEIREGRGCDGPWGPHLKLKLDHLGKDVLEARLPGILELSRTFAHIDPIKEPIPVIPTCHYMMGGIPTQISGQAIKQDPNGKDVEIQGLFACGEIASVSVHGANRLGGNSLLDLVVFGRATGLHLGETLAAQVEARDASESDIEASLTRVNRWNSTQKGEDPVQIRKDLQSCMQNNFSVFREGDAMAKGLEELKVIRERLKEARLDDNSSEFNTQRIECLELDNLMETAFSTAVAANYRTESRGAHARFDYQERDDENWLCHTIYNPETEAMTKRDVNMTPIHRDTFVPK 565 LQISEQGL+CALLSKVFPTRSHTVSAQGGITVALGNSH+DNW+WHMYDTVKGSDYIGDQ+AIEYMCKTGPQS+IELEKMGLPFSRFE+GSIYQRPFGGQSK FGGEQAARTAAAADRTGHALLHTLYQQNIKNKT IFSEWYALDLVKNQDG +VGATAMCME+GEICYFK+KATV+ATGGAGRIYQSTTNAHINTGDGVGMALRAGVPMQDMEMWQFHPTGIAGAGVLVTEGCRGEGGYLLNKDGERFMERYAPN KDLAGRDVVARSMM+EIREGRGCDGPWGPHLKLKLDHLGKDVLE+RLPGIL+LSRTFAH+DPIKEPIPVIPTCHYMMGGIPTQ+SGQAIKQDP G D+E+QGLFACGEIASVSVHGANRLGGNSLLDLVVFGRATGLHLGETLAAQVEARDASESDIEASL RVNRWNSTQ+GEDPV+IRKDLQ+CMQ NFSVFREG+AM KGL+ELK IRERLK ARLDD S+EFNTQR+ECLEL+NLMETA+STAV+A+YRTESRGAHARFDYQ+RDDENWLCH+IYNPETE M+KRDVNM P+HR+ F PK Sbjct: 24 LQISEQGLTCALLSKVFPTRSHTVSAQGGITVALGNSHQDNWQWHMYDTVKGSDYIGDQDAIEYMCKTGPQSVIELEKMGLPFSRFENGSIYQRPFGGQSKEFGGEQAARTAAAADRTGHALLHTLYQQNIKNKTTIFSEWYALDLVKNQDGVIVGATAMCMETGEICYFKSKATVLATGGAGRIYQSTTNAHINTGDGVGMALRAGVPMQDMEMWQFHPTGIAGAGVLVTEGCRGEGGYLLNKDGERFMERYAPNVKDLAGRDVVARSMMIEIREGRGCDGPWGPHLKLKLDHLGKDVLESRLPGILDLSRTFAHVDPIKEPIPVIPTCHYMMGGIPTQVSGQAIKQDPLGNDIEVQGLFACGEIASVSVHGANRLGGNSLLDLVVFGRATGLHLGETLAAQVEARDASESDIEASLARVNRWNSTQQGEDPVEIRKDLQACMQENFSVFREGEAMEKGLKELKEIRERLKSARLDDTSTEFNTQRVECLELENLMETAYSTAVSAHYRTESRGAHARFDYQDRDDENWLCHSIYNPETETMSKRDVNMAPVHREAFPPK 584
BLAST of succinate dehydrogenase flavoprotein subunit vs. nr
Match: gi|1148724618|ref|WP_077460167.1| (succinate dehydrogenase flavoprotein subunit [Salinivibrio sp. AR647] >gi|1146142857|gb|OOE93776.1| succinate dehydrogenase flavoprotein subunit [Salinivibrio sp. AR647]) HSP 1 Score: 1076.23 bits (2782), Expect = 0.000e+0 Identity = 513/562 (91.28%), Postives = 544/562 (96.80%), Query Frame = 0 Query: 5 LQISEQGLSCALLSKVFPTRSHTVSAQGGITVALGNSHEDNWEWHMYDTVKGSDYIGDQNAIEYMCKTGPQSIIELEKMGLPFSRFEDGSIYQRPFGGQSKAFGGEQAARTAAAADRTGHALLHTLYQQNIKNKTMIFSEWYALDLVKNQDGAVVGATAMCMESGEICYFKAKATVMATGGAGRIYQSTTNAHINTGDGVGMALRAGVPMQDMEMWQFHPTGIAGAGVLVTEGCRGEGGYLLNKDGERFMERYAPNAKDLAGRDVVARSMMVEIREGRGCDGPWGPHLKLKLDHLGKDVLEARLPGILELSRTFAHIDPIKEPIPVIPTCHYMMGGIPTQISGQAIKQDPNGKDVEIQGLFACGEIASVSVHGANRLGGNSLLDLVVFGRATGLHLGETLAAQVEARDASESDIEASLTRVNRWNSTQKGEDPVQIRKDLQSCMQNNFSVFREGDAMAKGLEELKVIRERLKEARLDDNSSEFNTQRIECLELDNLMETAFSTAVAANYRTESRGAHARFDYQERDDENWLCHTIYNPETEAMTKRDVNMTPIHRDTFVPKA 566 LQISEQGL+CALLSKVFPTRSHTVSAQGGITVALGNSH+DNW+WHMYDTVKGSDYIGDQ+AIEYMCKTGPQS+IELEKMGLPFSRFEDGSIYQRPFGGQSK FGGEQAARTAAAADRTGHALLHTLYQQNIKNKT IFSEWYALDLVKNQDG +VGATAMCME+GEICYFK+KATV+ATGGAGRIYQSTTNAHINTGDGVGMALRAGVPMQDME WQFHPTGIAGAGVLVTEGCRGEGGYLLNKDGERFMERYAPNAKDLAGRDVVARSMM+EIREGRGC+GPWGPH+KLKLDHLGKDVLE+RLPGIL+LSRTFAH+DPIKEPIPVIPTCHYMMGGIPTQ+SGQAIKQDP G D+E+QGLFACGEIASVSVHGANRLGGNSLLDLVVFGRATGLHLGETLAAQVEARDASESDIEASL RVNRWNSTQ+GEDPV+IRKDLQ+CMQ NFSVFREG+AM KGL+EL IRERLK ARLDD S+EFNTQR+ECLEL+NLMETA+STAV+A YRTESRGAHARFDYQERDDENWLCH+IYNPETE M+KRDVNM P+HRD F PKA Sbjct: 24 LQISEQGLTCALLSKVFPTRSHTVSAQGGITVALGNSHKDNWQWHMYDTVKGSDYIGDQDAIEYMCKTGPQSVIELEKMGLPFSRFEDGSIYQRPFGGQSKEFGGEQAARTAAAADRTGHALLHTLYQQNIKNKTTIFSEWYALDLVKNQDGVIVGATAMCMETGEICYFKSKATVLATGGAGRIYQSTTNAHINTGDGVGMALRAGVPMQDMEXWQFHPTGIAGAGVLVTEGCRGEGGYLLNKDGERFMERYAPNAKDLAGRDVVARSMMIEIREGRGCEGPWGPHIKLKLDHLGKDVLESRLPGILDLSRTFAHVDPIKEPIPVIPTCHYMMGGIPTQVSGQAIKQDPLGNDIEVQGLFACGEIASVSVHGANRLGGNSLLDLVVFGRATGLHLGETLAAQVEARDASESDIEASLARVNRWNSTQQGEDPVEIRKDLQACMQENFSVFREGEAMEKGLKELDAIRERLKTARLDDTSTEFNTQRVECLELENLMETAYSTAVSAYYRTESRGAHARFDYQERDDENWLCHSIYNPETETMSKRDVNMAPVHRDAFPPKA 585 The following BLAST results are available for this feature:
BLAST of succinate dehydrogenase flavoprotein subunit vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 2
BLAST of succinate dehydrogenase flavoprotein subunit vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
Pagesback to top
BLAST of succinate dehydrogenase flavoprotein subunit vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold709_size108516:82778..85254+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold709_size108516-snap-gene-0.18 ID=maker-scaffold709_size108516-snap-gene-0.18|Name=succinate dehydrogenase flavoprotein subunit|organism=Tigriopus kingsejongensis|type=gene|length=2477bp|location=Sequence derived from alignment at scaffold709_size108516:82778..85254+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'succinate dehydrogenase flavoprotein subunit' has the following synonyms
Add to Basket
|