GA20104, maker-scaffold71_size417697-snap-gene-2.16 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of GA20104 vs. L. salmonis genes
Match: EMLSAG00000010008 (supercontig:LSalAtl2s:LSalAtl2s658:26144:68191:1 gene:EMLSAG00000010008 transcript:EMLSAT00000010008 description:"maker-LSalAtl2s658-augustus-gene-0.4") HSP 1 Score: 79.7221 bits (195), Expect = 2.364e-17 Identity = 49/165 (29.70%), Postives = 86/165 (52.12%), Query Frame = 0 Query: 55 EIPKCIPRDTLVSLPPPEDETILEFFPSQVMVPRCSGGCHLSGNHQHKCLPVPKSRYQKPIQVIAKRGSQTFNCSTIELEAHRD-CRCGCEIDASNCSADQVFVQTLCQCQCRDFDEQNKCQRTND--KFWDRNSCQCLCLPSVTKECSTGYNFDSIDTCINGLV 216 E +C+ RDT+V P P+D + E P V+VPRC+G C + C +PK + + V + + C+ +++E HR CRC C D +C A Q F + C+C+C++ K ++D + W+ ++C C+C + C+ G+ F + TC+ ++ Sbjct: 89 EAHRCLVRDTVVRXPLPDDLIVSEAMPEFVVVPRCTGLCL----DRSGCSCIPKKKRHTKVDVXINVNNSSQVCAEVKIEEHRGPCRCKC--DLKDCHAYQEFDELTCKCRCKEKFGSLKSSCSSDILRHWEEDACDCICDRVI---CADGF-FQDLKTCMCKMI 243
BLAST of GA20104 vs. L. salmonis genes
Match: EMLSAG00000012376 (supercontig:LSalAtl2s:LSalAtl2s906:63861:86606:-1 gene:EMLSAG00000012376 transcript:EMLSAT00000012376 description:"maker-LSalAtl2s906-augustus-gene-0.12") HSP 1 Score: 79.337 bits (194), Expect = 2.481e-17 Identity = 48/167 (28.74%), Postives = 76/167 (45.51%), Query Frame = 0 Query: 44 CSTLDKERIWNEIPKCIPRDTLVSLPPPEDETILEFFPSQVMVPRCSGGCHLSGNHQHKCLPVPKSRYQKPIQ----VIAKRGSQTFNCSTIELEAHRDCRCGCEIDASNCSADQVFVQTLCQCQCRDFDEQNKCQRTNDKFWDRNSCQCLCLPSVTKECSTGYNFD 206 C++ + N C PR ++ LP P + PS V+V RC G CH + + CLP + P+ I + CS ++++ H +C C C+I +C+A QV+ + LC CQC+D E C + + WD + C+P T E G + Sbjct: 39 CTSPHERGAMNSKASCRPRPRVIRLPWPNSTEVNHMIPSHVIVDRCDGSCH---HRKQSCLPRKVIKKSFPVMFAHCTIHDKTCGKI-CSQVQVDEHLECGCECKIKRHHCNAKQVYRKELCSCQCKDLSEVQACYNSG-RVWDPSK----CIPEETNELEAGERIE 196
BLAST of GA20104 vs. L. salmonis genes
Match: EMLSAG00000000061 (supercontig:LSalAtl2s:LSalAtl2s100:182217:183023:-1 gene:EMLSAG00000000061 transcript:EMLSAT00000000061 description:"augustus_masked-LSalAtl2s100-processed-gene-1.11") HSP 1 Score: 74.3294 bits (181), Expect = 6.244e-16 Identity = 48/154 (31.17%), Postives = 73/154 (47.40%), Query Frame = 0 Query: 65 LVSLPPPEDETILEFFPSQVMVPRCSGGCHLSGNHQHKCLPVPKSRYQKPIQVIAKRGSQ-TFN--CSTIELEAHRDCRCGCEIDASN--CSADQ--VFVQTLCQCQCRDFDEQNKCQRTNDKFWDRNSCQCLCLPSVTKECSTGYNFDSIDTC 211 L +LP D I PS + RCSG C +C+P + + R SQ +N C ++ +E H DC C C D + C+AD + + C+C+C D + +C R+ K W+ +C C+C S + C TG+ FD +TC Sbjct: 53 LTNLPALNDNRISRVIPSYALTDRCSGACD-----TLECVPTKIENITVHVMAVMTRYSQGEWNTVCVSLRIEKHLDCSCSCPDDEEHRSCNADPNVYYDASSCKCKCNDRIARTECLRSG-KLWNERNCGCICPQSSWRPCGTGFIFDYRETC 200
BLAST of GA20104 vs. L. salmonis genes
Match: EMLSAG00000006508 (supercontig:LSalAtl2s:LSalAtl2s356:707060:708449:1 gene:EMLSAG00000006508 transcript:EMLSAT00000006508 description:"maker-LSalAtl2s356-augustus-gene-6.30") HSP 1 Score: 73.9442 bits (180), Expect = 6.448e-16 Identity = 52/177 (29.38%), Postives = 83/177 (46.89%), Query Frame = 0 Query: 42 EICSTLDKERIWNEIPKCIPRDTLVSLPPPEDETILEFFPSQVMVPRCSGGCHLSG-------NHQHKCLPVPKSRYQKPIQVIAKRGSQTFNCSTIELEAHRDCRCGCEIDASNCSAD----QVFVQTLCQCQCRDFDEQNKCQRTNDKFWDRNSCQCLCL-PSVTKECSTGYNFD 206 E CS +E I + I C P +T++ L P ++T P+ V V RC G C + N L P+S G+ + CS++ ++ H C CG I A C+ +V++ C+C CRD ++ C + + FW+ +C+C+C P+ C TGY+FD Sbjct: 23 ETCSAKQQEMILSRILSCRPIETVIPLDYPFNDTYSLMKPTHVSVKRCQGSCFSNNCIAKQIINRNVDVLYFPRSS--------NPDGTISPICSSVIVQDHITCGCGXSIXADECTDTGMDIRVYLPGECRCACRDVSKRGNCLKQGN-FWNFQTCECMCQNPNSWPICPTGYSFD 190
BLAST of GA20104 vs. L. salmonis genes
Match: EMLSAG00000000944 (supercontig:LSalAtl2s:LSalAtl2s1166:164075:170496:-1 gene:EMLSAG00000000944 transcript:EMLSAT00000000944 description:"maker-LSalAtl2s1166-augustus-gene-1.26") HSP 1 Score: 60.077 bits (144), Expect = 1.979e-10 Identity = 39/132 (29.55%), Postives = 67/132 (50.76%), Query Frame = 0 Query: 79 FFPSQVMVPRCSGGCHLSGNHQHKCLPVPKSRYQKPIQVIAKRGSQTFNCS---TIELEAHRDCRCGCEIDASNCSADQVFVQTLCQCQCRDFD-EQNKCQRTNDKFWDRNSCQCLCLPSVTKECSTGYNFD 206 ++P+ V V RC+G C H L +++ I + R +Q N I + H+ C C C + +C ++QV+ ++ C+C C+ D E+ +C ++ W+ + C C CL V EC+TG +FD Sbjct: 108 YYPTCVRVERCNGCC------SHNLLSC-QAKESGTIDITIMRANQRTNSVEYLKIPVIQHKTCSCDCIVKEEDCLSNQVYKRSDCRCACKATDTEKLECISQGNRIWNPHKCFCQCL--VVFECTTGQSFD 230
BLAST of GA20104 vs. nr
Match: gi|1339059687|ref|XP_023718401.1| (vascular endothelial growth factor A-A-like [Cryptotermes secundus]) HSP 1 Score: 87.4261 bits (215), Expect = 7.423e-17 Identity = 48/146 (32.88%), Postives = 81/146 (55.48%), Query Frame = 0 Query: 61 PRDTLVSLPPPEDETILEFFPSQVMVPRCSGGCHLSGNHQHKCLPVPKSRYQKPIQVIAKRGSQTFNCSTIELEAHRDCRCGCEIDASNCSAD-QVFVQTLCQCQCRDFDEQNKCQRTNDKFWDRNSCQCLCLPSVTKECSTGYNF 205 PRDT+V P DE +++ PS V+V +C+G C HQ C+P K P V R ++ C TI +E H C+C C + S+C + Q + + C C+C + DE+ +C+++ + WD+ +C+C C+ +C+TG+ + Sbjct: 83 PRDTVV--PIISDEPGIQYIPSTVVVKKCAGACL----HQLSCIPTEKKMV--PFSVRRHREGESITCGTIYVEEHVRCKCNCRVMESHCIPEKQEYDRRACMCRCMNMDEKEECEKSG-RLWDQKACKCQCIKE-HDDCTTGHYW 218
BLAST of GA20104 vs. nr
Match: gi|1330891073|gb|PNF22566.1| (hypothetical protein B7P43_G12859 [Cryptotermes secundus]) HSP 1 Score: 85.1149 bits (209), Expect = 7.856e-17 Identity = 48/146 (32.88%), Postives = 81/146 (55.48%), Query Frame = 0 Query: 61 PRDTLVSLPPPEDETILEFFPSQVMVPRCSGGCHLSGNHQHKCLPVPKSRYQKPIQVIAKRGSQTFNCSTIELEAHRDCRCGCEIDASNCSAD-QVFVQTLCQCQCRDFDEQNKCQRTNDKFWDRNSCQCLCLPSVTKECSTGYNF 205 PRDT+V P DE +++ PS V+V +C+G C HQ C+P K P V R ++ C TI +E H C+C C + S+C + Q + + C C+C + DE+ +C+++ + WD+ +C+C C+ +C+TG+ + Sbjct: 9 PRDTVV--PIISDEPGIQYIPSTVVVKKCAGAC----LHQLSCIPTEKKMV--PFSVRRHREGESITCGTIYVEEHVRCKCNCRVMESHCIPEKQEYDRRACMCRCMNMDEKEECEKSG-RLWDQKACKCQCIKE-HDDCTTGHYW 144
BLAST of GA20104 vs. nr
Match: gi|1325278042|ref|XP_023323662.1| (balbiani ring protein 3-like [Eurytemora affinis]) HSP 1 Score: 88.1965 bits (217), Expect = 8.471e-17 Identity = 53/157 (33.76%), Postives = 81/157 (51.59%), Query Frame = 0 Query: 59 CIPRDTLVSLPPPEDETILEFFPSQVMVPRCSGGCHLSGNHQHKCLPVPKSRYQKPIQVIAKR----GSQTFNCSTIELEAHRDCRCGCEIDASNCSADQVFVQTLCQCQCRDFDEQNKCQRTNDKFWDRNSCQCLCLPSVTKECSTGYNFDSIDTC 211 C PR T++ LP P+D+ PS + V RCSG C S H C+P ++R +K +++ R G C +E+E H C CGC+I +C+ Q F+ + C+C C D E+ C + +W+ + C C+C C +GY FD +TC Sbjct: 39 CKPRLTVIRLPDPKDQ-FSHVTPSHIEVLRCSGSCLHS---YHNCIPR-ETRTRKEKVLLSLRSLASGPAESTCGEVEVEEHVSCSCGCDISELHCTQRQRFLASECRCVCEDTREREDCIQ-KGWYWNSDLCHCMCPNRPYPTCPSGYIFDHEETC 189
BLAST of GA20104 vs. nr
Match: gi|1236473789|ref|XP_022214072.1| (uncharacterized protein LOC111068703 [Drosophila obscura]) HSP 1 Score: 88.9669 bits (219), Expect = 8.529e-17 Identity = 54/166 (32.53%), Postives = 88/166 (53.01%), Query Frame = 0 Query: 46 TLDKERIWNEIPK-CIPRDTLVSLPPPEDETI---LEFFPSQVMVPRCSGGCHLSGNHQHKCLPVPKSRYQKPIQVIAKRGSQTFNCSTIELEAHRDCRCGCEIDASNCSADQVFVQTLCQCQCRDFDEQNKC-QRTNDKFWDRNSCQCLCLPSVTKECSTGYNFD 206 ++ + I N P C P+ T+V L PP DE + + P+ + RC+G C G+ C P + Q ++ +RG T I +E H CRC C I A +C+A Q++ + LC+C+C++ D ++KC ++ + K+WD +C C C + C+TG FD Sbjct: 135 SVTRSAIRNATPAICSPQPTIVELKPPSDEAGGFNVYYTPACTRINRCNGCC---GSTLISCQPTQTEKVQMRVRKF-ERGGTTRVSEIIVVEQHLACRCDCRIKAEDCNAYQLYRRELCRCECQNTDARDKCLEQADSKYWDDANCTCAC--RYNQSCTTGTVFD 294
BLAST of GA20104 vs. nr
Match: gi|1325268190|ref|XP_023344834.1| (uncharacterized protein LOC111714050 [Eurytemora affinis]) HSP 1 Score: 89.3521 bits (220), Expect = 1.525e-16 Identity = 57/157 (36.31%), Postives = 78/157 (49.68%), Query Frame = 0 Query: 59 CIPRDTLVSLPPPEDETILEFFPSQVMVPRCSGGCHLSGNHQHKCLPVPKSRYQKPIQVIAK----RGSQTFNCSTIELEAHRDCRCGCEIDASNCSADQVFVQTLCQCQCRDFDEQNKCQRTNDKFWDRNSCQCLCLPSVTKECSTGYNFDSIDTC 211 C PR TL+ LP P I + P+ V V +C G C G H C P K+R +K +++K G+ CST+E+E H DC C C ++ S+C DQ LC CQCRD + C + WD +SC C C +EC+ G + TC Sbjct: 53 CAPRATLLRLPWPNSTQIDQMTPTYVTVQQCDGSCTQYG---HSCTPR-KTRMRKVPVILSKCGISSGTCDKECSTLEIEEHLDCSCSCSLEQSSCRLDQELRADLCSCQCRDILGKQTCLDAG-RIWDDSSCSCGC---SEQECAPGTQLQ-VSTC 200
BLAST of GA20104 vs. nr
Match: gi|751455108|ref|XP_011182059.1| (PREDICTED: vascular endothelial growth factor D isoform X2 [Zeugodacus cucurbitae]) HSP 1 Score: 86.6557 bits (213), Expect = 2.658e-16 Identity = 57/188 (30.32%), Postives = 86/188 (45.74%), Query Frame = 0 Query: 25 RATDGETLPNSTGFQADEICSTLDKERIWNEIPK-CIPRDTLVSLPP--PEDETILEFFPSQVMVPRCSGGCHLSGNHQHKCLPVPKSRYQ---KPIQVIAKRGSQTFNCSTIELEAHRDCRCGCEIDASNCSADQVFVQTLCQCQCRDFDEQNKCQRTNDKFWDRNSCQCLCLPSVTKECSTGYNFD 206 R D +TL GFQ D ++++ + P CIP +T+V L P P + +++FP V RC G C + C PV P +V + + + +E H C+C C I A +C Q ++ C C+C + D + KC KFWD C+C+C S + C+TG FD Sbjct: 87 RFVDKDTLDPQLGFQ-DNFRRSVERANLQQAKPAACIPENTVVPLIPLEPSKDPKIDYFPKCTRVKRCGGCC---SSQLMSCQPVETETINFQVVPFEVATGNRMRLYGKEIVVVEQHTKCKCDCRIKAEDCKQYQRYLPDRCTCECTNDDARQKCYEQTHKFWDETECRCVCRDS--QSCTTGTIFD 268
BLAST of GA20104 vs. nr
Match: gi|751455098|ref|XP_011182054.1| (PREDICTED: uncharacterized protein LOC105212013 isoform X1 [Zeugodacus cucurbitae] >gi|751455100|ref|XP_011182055.1| PREDICTED: uncharacterized protein LOC105212013 isoform X1 [Zeugodacus cucurbitae] >gi|751455102|ref|XP_011182056.1| PREDICTED: uncharacterized protein LOC105212013 isoform X1 [Zeugodacus cucurbitae] >gi|751455104|ref|XP_011182057.1| PREDICTED: uncharacterized protein LOC105212013 isoform X1 [Zeugodacus cucurbitae] >gi|751455106|ref|XP_011182058.1| PREDICTED: uncharacterized protein LOC105212013 isoform X1 [Zeugodacus cucurbitae]) HSP 1 Score: 87.0409 bits (214), Expect = 2.796e-16 Identity = 57/188 (30.32%), Postives = 86/188 (45.74%), Query Frame = 0 Query: 25 RATDGETLPNSTGFQADEICSTLDKERIWNEIPK-CIPRDTLVSLPP--PEDETILEFFPSQVMVPRCSGGCHLSGNHQHKCLPVPKSRYQ---KPIQVIAKRGSQTFNCSTIELEAHRDCRCGCEIDASNCSADQVFVQTLCQCQCRDFDEQNKCQRTNDKFWDRNSCQCLCLPSVTKECSTGYNFD 206 R D +TL GFQ D ++++ + P CIP +T+V L P P + +++FP V RC G C + C PV P +V + + + +E H C+C C I A +C Q ++ C C+C + D + KC KFWD C+C+C S + C+TG FD Sbjct: 87 RFVDKDTLDPQLGFQ-DNFRRSVERANLQQAKPAACIPENTVVPLIPLEPSKDPKIDYFPKCTRVKRCGGCC---SSQLMSCQPVETETINFQVVPFEVATGNRMRLYGKEIVVVEQHTKCKCDCRIKAEDCKQYQRYLPDRCTCECTNDDARQKCYEQTHKFWDETECRCVCRDS--QSCTTGTIFD 268
BLAST of GA20104 vs. nr
Match: gi|1279704708|ref|XP_022903176.1| (uncharacterized protein LOC111415648 [Onthophagus taurus]) HSP 1 Score: 86.6557 bits (213), Expect = 4.079e-16 Identity = 58/166 (34.94%), Postives = 83/166 (50.00%), Query Frame = 0 Query: 49 KERIWNEIPK---CIPRDTLVSLPPPEDETILEFFPSQVMVPRCSGGCHLSGNHQHKCLPVPKSRYQKPIQVIAKRGSQTFNCSTIE-----LEAHRDCRCGCEIDASNCSADQVFVQTLCQCQCRDFDEQNKCQRTNDKFWDRNSCQCLCLPSVTKECSTGYNFD 206 +ER +IPK CIP VSL + TI+ + PS + RC G C+ +++ +C P+ QVI S +E LE H+ C CGC++ A +C+ Q + + C+C CR+ DEQ KC + K WD SC+C C S C+TG FD Sbjct: 128 EERANVQIPKPAQCIPELQTVSLRQSPNPTIM-YLPSCTRIERCGGCCN---HNKLECQPMEIENVN--FQVIKTEFSGGAKLRFVEKIAVTLERHKKCACGCKVKAEHCTLRQEYRENECRCVCRNLDEQKKCAKEYKKLWDSESCECQCRNSTI--CTTGTTFD 285
BLAST of GA20104 vs. nr
Match: gi|665785942|ref|XP_008549901.1| (PREDICTED: balbiani ring protein 3-like isoform X1 [Microplitis demolitor]) HSP 1 Score: 84.7297 bits (208), Expect = 8.161e-16 Identity = 55/198 (27.78%), Postives = 99/198 (50.00%), Query Frame = 0 Query: 18 VLQHPELRATDGETLPNSTGFQADEICSTLDKE-------RIWNEIPK---CIPRDTLVSLPPPEDETILEFFPSQVMVPRCSGGCHLSGNHQHKCLPVPKSRYQKPIQVIAKRGSQTFNCSTIELEAHRDCRCGCEIDASNCSADQVFVQTLCQCQCRDFDEQNKCQRTNDKFWDRNSCQCLCLPSVTKECSTGYNF 205 V + PE+ T ++PN+ +++ S +E + +++ K C PR TLV L P ++ + P +++ RC G C G+ C+P+ + +Q + + GS C I++E H C+C C++ +S+C++ Q + Q C C+C + E C D FW+ ++C+C CL + CSTG + Sbjct: 44 VTKKPEVNFTPKVSIPNTIKSTVEKVTSNSGQEVECRGMTKTLSKMGKDVICKPRPTLVKLNP---DSGYIYIPDVILIDRCDGRC---GHESQSCMPIETVSTRVLVQRM-QIGSLHSPCWEIQVEKHTRCKCDCQLMSSDCNSRQKYNQDDCTCECSNIKEMLDCSLKEDMFWNHDTCRCSCLAE-EETCSTGLMW 233
BLAST of GA20104 vs. nr
Match: gi|194769548|ref|XP_001966866.1| (uncharacterized protein Dana_GF19053, isoform C [Drosophila ananassae] >gi|964079651|ref|XP_014759583.1| uncharacterized protein Dana_GF19053, isoform B [Drosophila ananassae] >gi|190618387|gb|EDV33911.1| uncharacterized protein Dana_GF19053, isoform C [Drosophila ananassae] >gi|939217528|gb|KPU74835.1| uncharacterized protein Dana_GF19053, isoform B [Drosophila ananassae]) HSP 1 Score: 85.8853 bits (211), Expect = 9.088e-16 Identity = 61/196 (31.12%), Postives = 93/196 (47.45%), Query Frame = 0 Query: 24 LRATDGETLPNSTGFQADEICSTLDKERIWNEIPK----------CIPRDTLVSLPPPEDETILEFF-PSQVMVPRCSGGCHLSGNHQHKCLPVPKSRYQKPIQVIAKRGSQTFNCSTI-ELEAHRDCRCGCEIDASNCSADQVFVQTLCQCQCRDFDEQNKC-QRTNDKFWDRNSCQCLCLPSVTKECSTGYNFD 206 L L N T D KE + +P+ C P+ T+V L PP E+ F+ P+ V RCSG C G+ C P Q + + G++ TI ++E H CRCGC I +C+A Q + Q LC+C+C + D ++KC ++ + K+WD +C C C +++ C+TG FD Sbjct: 100 LEGVSSSELGNVTAVDYDVSGEASSKENVKRHVPRAAIRFASAASCSPQPTIVELKPPGAESSNFFYTPACTRVNRCSGCC---GSTLITCQPTETEIVQMRVWRGDRSGAEPRRKVTIVDVEQHLACRCGCRIKEGDCNAYQSYRQELCRCECHNTDAKDKCLEQLDVKYWDDANCTCACRYNLS--CTTGTVFD 290 The following BLAST results are available for this feature:
BLAST of GA20104 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 5
BLAST of GA20104 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 0
BLAST of GA20104 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold71_size417697:192251..211992- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold71_size417697-snap-gene-2.16 ID=maker-scaffold71_size417697-snap-gene-2.16|Name=GA20104|organism=Tigriopus kingsejongensis|type=gene|length=19742bp|location=Sequence derived from alignment at scaffold71_size417697:192251..211992- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'GA20104' has the following synonyms
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