conserved hypothetical protein, maker-scaffold759_size101470-snap-gene-0.19 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of conserved hypothetical protein vs. L. salmonis genes
Match: EMLSAG00000005166 (supercontig:LSalAtl2s:LSalAtl2s272:98980:103362:-1 gene:EMLSAG00000005166 transcript:EMLSAT00000005166 description:"maker-LSalAtl2s272-augustus-gene-1.14") HSP 1 Score: 83.9593 bits (206), Expect = 1.227e-19 Identity = 43/88 (48.86%), Postives = 56/88 (63.64%), Query Frame = 0 Query: 30 TFSIAGPNEGTAVMAPDVPQTS--NGDVIGKCLTDQFSISAPGNFAPPVVCGFNSGQHMIVDASDECHEVRFNFGGSSA--RTWDIKG 113 TF+IA P T + D T+ N G C+TD FS ++PG+ PV+CG NSGQHMI+DASDEC+ + FN G S+A R+W IK Sbjct: 445 TFTIANPF--TTPVGADAAGTTITNAGATGDCVTDSFSFTSPGSRGSPVICGANSGQHMILDASDECNVLNFNIGSSAATSRSWIIKA 530
BLAST of conserved hypothetical protein vs. L. salmonis genes
Match: EMLSAG00000011908 (supercontig:LSalAtl2s:LSalAtl2s83:643787:645943:-1 gene:EMLSAG00000011908 transcript:EMLSAT00000011908 description:"maker-LSalAtl2s83-augustus-gene-6.23") HSP 1 Score: 77.0258 bits (188), Expect = 2.461e-17 Identity = 37/86 (43.02%), Postives = 58/86 (67.44%), Query Frame = 0 Query: 30 TFSIAGPNEGTAVMAPD--VPQTSNGDVIGKCLTDQFSISAPGNFAPPVVCGFNSGQHMIVDASDECHEVRFNFGGSSAR-TWDIK 112 TF I GP+ T + + + + +N +CLTD F+++ PG +PPV+CG NSG+HM VD+S++C+E+ FN G++AR W+IK Sbjct: 182 TFDITGPSTNTISVGKNAALKEVTNEQ---RCLTDTFAVTNPGGASPPVICGMNSGEHMYVDSSEQCNELAFNLQGANARQMWNIK 264
BLAST of conserved hypothetical protein vs. L. salmonis genes
Match: EMLSAG00000000066 (supercontig:LSalAtl2s:LSalAtl2s100:472529:474152:-1 gene:EMLSAG00000000066 transcript:EMLSAT00000000066 description:"maker-LSalAtl2s100-augustus-gene-4.21") HSP 1 Score: 69.3218 bits (168), Expect = 1.254e-14 Identity = 41/111 (36.94%), Postives = 62/111 (55.86%), Query Frame = 0 Query: 33 IAGPNEGTAVMAPDVPQTSNGDVIGKCLTDQFSISAPGNFAPPVVCGFNSGQHMIVDASDECHEVRFNFGGSSA--RTWDIKGNYLHHLQYHPLELAQSRPFQMHFKTDDA 141 +A P GTAV+ V + G+C D+F+ S+ G PV+CG+N+GQHMI+DAS++C+ + F G S+A R W IK QY+ +L + + TDD+ Sbjct: 136 LADPVSGTAVVGA-VNVIDSRYAHGQCTEDRFTFSSIGKNGAPVICGYNTGQHMILDASEQCNVLSFTVGSSTAVSREWSIK-----VTQYNCGDLNAGPSGCLQYFTDDS 240
BLAST of conserved hypothetical protein vs. L. salmonis genes
Match: EMLSAG00000004321 (supercontig:LSalAtl2s:LSalAtl2s227:153019:155658:-1 gene:EMLSAG00000004321 transcript:EMLSAT00000004321 description:"maker-LSalAtl2s227-snap-gene-1.26") HSP 1 Score: 67.781 bits (164), Expect = 2.649e-14 Identity = 33/63 (52.38%), Postives = 41/63 (65.08%), Query Frame = 0 Query: 53 GDVIGKCLTDQFSISAPGNFAPPVVCGFNSGQHMIVDASDE-CHEVRFNFG--GSSARTWDIK 112 G +G C D +S+PG A P +CGFN+GQHMIVD SD C+E+ FN G S+AR W IK Sbjct: 65 GGALGDCTVDFMILSSPGGQASPAICGFNTGQHMIVDMSDTGCNELTFNLGTASSTARQWSIK 127
BLAST of conserved hypothetical protein vs. L. salmonis genes
Match: EMLSAG00000009733 (supercontig:LSalAtl2s:LSalAtl2s627:64350:67809:1 gene:EMLSAG00000009733 transcript:EMLSAT00000009733 description:"snap_masked-LSalAtl2s627-processed-gene-0.30") HSP 1 Score: 65.855 bits (159), Expect = 1.483e-13 Identity = 32/71 (45.07%), Postives = 44/71 (61.97%), Query Frame = 0 Query: 44 APDVPQTSNGDVIGKCLTDQFSISAPGNFAPPVVCGFNSGQHMIVDASDECHEVRFNFGGSSA--RTWDIK 112 AP T + +G C+T QFS++ N P++CG NSGQHMIVDA D C+ V F G ++ R+W+IK Sbjct: 161 APVSVATVDXGAVGDCVTXQFSVTXR-NMGSPIICGMNSGQHMIVDADDNCNVVSFAIGAAAVPLRSWNIK 230
BLAST of conserved hypothetical protein vs. L. salmonis genes
Match: EMLSAG00000000641 (supercontig:LSalAtl2s:LSalAtl2s10:137895:140084:-1 gene:EMLSAG00000000641 transcript:EMLSAT00000000641 description:"maker-LSalAtl2s10-snap-gene-1.10") HSP 1 Score: 62.003 bits (149), Expect = 2.436e-12 Identity = 36/121 (29.75%), Postives = 58/121 (47.93%), Query Frame = 0 Query: 58 KCLTDQFSISAPGNFAPPVVCGFNSGQHMIVDASDECHEVRFNFGGSSART-WDIKG------------------------------NYLHHLQYHPLELAQSRPFQMHFKTDDAEHVQDT 147 +C ++ FS+S PG PPV+CG N G HM VD + C+++ F GSS + W IK NY +L + L +A+S PF + F++D+ E ++++ Sbjct: 102 RCNSESFSVSNPGGTTPPVICGMNDGYHMYVDTNSNCNDLTFLLDGSSDNSNWLIKVTQYDCFYSNLAPSGCTQWFFGPLTNDVTSFNYQEYLNF--LLIARSLPFSITFRSDNYEFMEES 220
BLAST of conserved hypothetical protein vs. L. salmonis genes
Match: EMLSAG00000004323 (supercontig:LSalAtl2s:LSalAtl2s227:164788:172918:-1 gene:EMLSAG00000004323 transcript:EMLSAT00000004323 description:"maker-LSalAtl2s227-augustus-gene-1.21") HSP 1 Score: 62.3882 bits (150), Expect = 2.708e-12 Identity = 29/60 (48.33%), Postives = 40/60 (66.67%), Query Frame = 0 Query: 56 IGKCLTDQFSISAPGNFAPPVVCGFNSGQHMIVDASD-ECHEVRFNF--GGSSARTWDIK 112 IG C+ D ++S+PG P +CG NSGQH+IVD SD C+E+ FN G ++ R W+IK Sbjct: 159 IGDCIDDTMTLSSPGGQGSPTICGLNSGQHIIVDMSDLGCNELTFNLSPGSNANREWNIK 218
BLAST of conserved hypothetical protein vs. L. salmonis genes
Match: EMLSAG00000010265 (supercontig:LSalAtl2s:LSalAtl2s67:935633:937393:-1 gene:EMLSAG00000010265 transcript:EMLSAT00000010265 description:"maker-LSalAtl2s67-snap-gene-9.21") HSP 1 Score: 61.2326 bits (147), Expect = 7.169e-12 Identity = 43/118 (36.44%), Postives = 57/118 (48.31%), Query Frame = 0 Query: 31 FSIAGPNEGTAVMAPDVPQTSNGDVIGKCLTDQFSISAPGNFAPPVVCGFNSGQHMIVDASDECHEVRFNFGGSSA---RTWDIKGNYLHHLQYHPLELAQSRPFQMHFKTDDAEHVQ 145 F I GP MA D P + G C TD F++S PV+CGFN+GQHMIV+A D C+ FN G ++A RTW I + QY + P + + T + VQ Sbjct: 131 FVINGPE-----MADDNPNS-----YGNCNTDSFTVSG-NQGGSPVICGFNTGQHMIVEAQDTCNTAFFNIGDNTAGVTRTWSI-----NVTQYECGDEFGGPPGCLQYLTSTSGFVQ 232
BLAST of conserved hypothetical protein vs. L. salmonis genes
Match: EMLSAG00000007539 (supercontig:LSalAtl2s:LSalAtl2s434:427286:429061:1 gene:EMLSAG00000007539 transcript:EMLSAT00000007539 description:"maker-LSalAtl2s434-snap-gene-3.8") HSP 1 Score: 61.2326 bits (147), Expect = 8.103e-12 Identity = 26/56 (46.43%), Postives = 40/56 (71.43%), Query Frame = 0 Query: 58 KCLTDQFSISAPGNFAPPVVCGFNSGQHMIVDASDECHEVRFNFGGSSAR-TWDIK 112 +CL D FS++ PG PPV+CG N+G+HM VD+++ C+++ FN ++ R TW IK Sbjct: 126 RCLMDTFSVTNPGGSTPPVICGMNNGEHMYVDSAEACNDLVFNSVSANVRQTWIIK 181
BLAST of conserved hypothetical protein vs. L. salmonis genes
Match: EMLSAG00000002101 (supercontig:LSalAtl2s:LSalAtl2s1395:30727:32553:-1 gene:EMLSAG00000002101 transcript:EMLSAT00000002101 description:"maker-LSalAtl2s1395-augustus-gene-0.19") HSP 1 Score: 60.8474 bits (146), Expect = 1.077e-11 Identity = 30/70 (42.86%), Postives = 44/70 (62.86%), Query Frame = 0 Query: 45 PDVPQTSNGDVIGKCLTDQFSISAPGNFAPPVVCGFNSGQHMIVDASDECHEVRFNFGGS--SARTWDIK 112 P + + G IG C TDQFS+++ N PV+CG N+GQH+IVDAS +C+ F G S R+W+++ Sbjct: 140 PVLTRAGEGSSIGDCTTDQFSVTS-ANGGSPVICGTNTGQHIIVDASQDCNVATFVVGPQPFSGRSWNVR 208
BLAST of conserved hypothetical protein vs. nr
Match: gi|1325309902|ref|XP_023336555.1| (uncharacterized protein LOC111707655 [Eurytemora affinis]) HSP 1 Score: 80.8777 bits (198), Expect = 5.618e-15 Identity = 39/87 (44.83%), Postives = 57/87 (65.52%), Query Frame = 0 Query: 29 ETFSIAGPNEGTAVMAPDVPQTSNGDVIGKCLTDQFSISAPGNFAPPVVCGFNSGQHMIVDASDECHEVRFNF--GGSSARTWDIKG 113 ETF+I+GP T V+ D+ S G +G CLTD F+++ PG+ APP +CGFN+GQHM VD+S C+ + FN ++ R+W +K Sbjct: 47 ETFTISGP--ATTVINTDIA--SVGPAVGDCLTDSFTVTTPGSGAPPTICGFNTGQHMFVDSSSACNILSFNIDTATTTTRSWRVKA 129
BLAST of conserved hypothetical protein vs. nr
Match: gi|1325295901|ref|XP_023330828.1| (uncharacterized protein LOC111703186 [Eurytemora affinis]) HSP 1 Score: 77.7962 bits (190), Expect = 1.300e-13 Identity = 40/87 (45.98%), Postives = 52/87 (59.77%), Query Frame = 0 Query: 29 ETFSIAGPNEGTAVMAPDVPQTSNGDVIGKCLTDQFSISAP-GNFAPPVVCGFNSGQHMIVDASDECHEVRFNF--GGSSARTWDIK 112 ETFSIAGP A V G IG C TD F+++AP G APP +CG N+GQHM VD+S C+++ FN S +R+W +K Sbjct: 151 ETFSIAGPQSADATAIASV-----GPSIGDCRTDSFTVTAPDGGSAPPTICGLNTGQHMFVDSSSSCNKLSFNIDTANSVSRSWRVK 232
BLAST of conserved hypothetical protein vs. nr
Match: gi|1325332124|ref|XP_023347917.1| (uncharacterized protein LOC111716666 [Eurytemora affinis]) HSP 1 Score: 72.7886 bits (177), Expect = 2.038e-12 Identity = 39/105 (37.14%), Postives = 59/105 (56.19%), Query Frame = 0 Query: 16 ATWTDHPAQN------VTVETFSIAGPNEGTAVMAPDVPQTSNGDVIGKCLTDQFSISAPGNFAPPVVCGFNSGQHMIVDASDECHEVRFNFGGSS--ARTWDIK 112 T+T P N + ETF+I+GP T A + G IG C TD F+++APG+ +PP +CG N+GQHM +D+S C+ + FN ++ R+W +K Sbjct: 28 CTYTVCPMNNNICKIRLDFETFTISGPATTTLNTADVII----GPSIGDCTTDSFTVTAPGSRSPPTICGLNTGQHMYLDSSSACNILSFNIDRATTVTRSWRVK 128
BLAST of conserved hypothetical protein vs. nr
Match: gi|1325255292|ref|XP_023319566.1| (uncharacterized protein LOC111694771 isoform X2 [Eurytemora affinis]) HSP 1 Score: 74.3294 bits (181), Expect = 2.163e-12 Identity = 43/131 (32.82%), Postives = 71/131 (54.20%), Query Frame = 0 Query: 29 ETFSIAGPNEGTAVMAPDVPQTSNGDVIGKCLTDQFSISAPGNFAPPVVCGFNSGQHMIVDASDECHEVRFNFGGS--SARTWDIK---------GNYL---HHLQYHPLELAQSRPFQMHFKTDDAEHVQ 145 TF IA P P V ++G +G C++D F+++ PG+ APP +CG+N+GQHM +D +D C+++ F F + ++R W+IK YL LQ+H L + + F +FK ++ H+ Sbjct: 134 STFEIAPPFSCGGSTEPVVCTAADGPRVGDCISDTFTVTTPGSPAPPTICGYNTGQHMYIDGNDLCNKLTFFFDLAVPASRQWEIKVTQYDSSDDSRYLPPPDCLQWHTGTLGEIKNF--NFKDVNSVHLS 262
BLAST of conserved hypothetical protein vs. nr
Match: gi|1325255289|ref|XP_023319557.1| (uncharacterized protein LOC111694771 isoform X1 [Eurytemora affinis]) HSP 1 Score: 74.3294 bits (181), Expect = 2.230e-12 Identity = 43/131 (32.82%), Postives = 71/131 (54.20%), Query Frame = 0 Query: 29 ETFSIAGPNEGTAVMAPDVPQTSNGDVIGKCLTDQFSISAPGNFAPPVVCGFNSGQHMIVDASDECHEVRFNFGGS--SARTWDIK---------GNYL---HHLQYHPLELAQSRPFQMHFKTDDAEHVQ 145 TF IA P P V ++G +G C++D F+++ PG+ APP +CG+N+GQHM +D +D C+++ F F + ++R W+IK YL LQ+H L + + F +FK ++ H+ Sbjct: 135 STFEIAPPFSCGGSTEPVVCTAADGPRVGDCISDTFTVTTPGSPAPPTICGYNTGQHMYIDGNDLCNKLTFFFDLAVPASRQWEIKVTQYDSSDDSRYLPPPDCLQWHTGTLGEIKNF--NFKDVNSVHLS 263 The following BLAST results are available for this feature:
BLAST of conserved hypothetical protein vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 13
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BLAST of conserved hypothetical protein vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 0
BLAST of conserved hypothetical protein vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 5
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold759_size101470:17903..29244+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold759_size101470-snap-gene-0.19 ID=maker-scaffold759_size101470-snap-gene-0.19|Name=conserved hypothetical protein|organism=Tigriopus kingsejongensis|type=gene|length=11342bp|location=Sequence derived from alignment at scaffold759_size101470:17903..29244+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'conserved hypothetical protein' has the following synonyms
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