histone h2a- partial, maker-scaffold791_size96783-snap-gene-0.25 (gene) Tigriopus kingsejongensis

Overview
Namehistone h2a- partial
Unique Namemaker-scaffold791_size96783-snap-gene-0.25
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
[Close]
BLAST of histone h2a- partial vs. L. salmonis genes
Match: EMLSAG00000012511 (supercontig:LSalAtl2s:LSalAtl2s921:217466:218531:-1 gene:EMLSAG00000012511 transcript:EMLSAT00000012511 description:"maker-LSalAtl2s921-augustus-gene-1.59")

HSP 1 Score: 84.3445 bits (207), Expect = 2.266e-23
Identity = 41/43 (95.35%), Postives = 42/43 (97.67%), Query Frame = 0 
Query:   16 IVPRHLQLAIRNDEELNKLLQGVTIAQGGVLPNIQAVLLPKKS 58
            I+PRHLQLAIRNDEELNKLL GVTIAQGGVLPNIQAVLLPKKS
Sbjct:   88 IIPRHLQLAIRNDEELNKLLAGVTIAQGGVLPNIQAVLLPKKS 130
[Close]
BLAST of histone h2a- partial vs. L. salmonis genes
Match: EMLSAG00000007561 (supercontig:LSalAtl2s:LSalAtl2s436:406900:407148:1 gene:EMLSAG00000007561 transcript:EMLSAT00000007561 description:"augustus_masked-LSalAtl2s436-processed-gene-4.1")

HSP 1 Score: 81.2629 bits (199), Expect = 8.516e-23
Identity = 40/46 (86.96%), Postives = 42/46 (91.30%), Query Frame = 0 
Query:   16 IVPRHLQLAIRNDEELNKLLQGVTIAQGGVLPNIQAVLLPKKSAKK 61
            I+PRHLQLAIRNDEELNKLL GVTIAQGGVLPNIQAVLL KK+ K 
Sbjct:   36 IIPRHLQLAIRNDEELNKLLVGVTIAQGGVLPNIQAVLLSKKTEKS 81
[Close]
BLAST of histone h2a- partial vs. L. salmonis genes
Match: EMLSAG00000001108 (supercontig:LSalAtl2s:LSalAtl2s1185:74095:74469:1 gene:EMLSAG00000001108 transcript:EMLSAT00000001108 description:"augustus_masked-LSalAtl2s1185-processed-gene-0.1")

HSP 1 Score: 82.0333 bits (201), Expect = 1.590e-22
Identity = 40/45 (88.89%), Postives = 42/45 (93.33%), Query Frame = 0 
Query:   16 IVPRHLQLAIRNDEELNKLLQGVTIAQGGVLPNIQAVLLPKKSAK 60
            I+PRHLQLAIRNDEELNKLL GV IAQGGVLPNIQAVLLPKK+ K
Sbjct:   78 IIPRHLQLAIRNDEELNKLLAGVXIAQGGVLPNIQAVLLPKKTEK 122
[Close]
BLAST of histone h2a- partial vs. L. salmonis genes
Match: EMLSAG00000005641 (supercontig:LSalAtl2s:LSalAtl2s303:362466:370455:1 gene:EMLSAG00000005641 transcript:EMLSAT00000005641 description:"maker-LSalAtl2s303-augustus-gene-3.23")

HSP 1 Score: 78.1814 bits (191), Expect = 2.224e-19
Identity = 37/46 (80.43%), Postives = 39/46 (84.78%), Query Frame = 0 
Query:   16 IVPRHLQLAIRNDEELNKLLQGVTIAQGGVLPNIQAVLLPKKSAKK 61
            I+PRHLQLAIRNDEELNKLL G TIAQGG LPNIQA+L  KK A K
Sbjct:  638 IIPRHLQLAIRNDEELNKLLAGXTIAQGGXLPNIQALLFLKKYANK 683
[Close]
BLAST of histone h2a- partial vs. L. salmonis genes
Match: EMLSAG00000011020 (supercontig:LSalAtl2s:LSalAtl2s741:230720:233818:-1 gene:EMLSAG00000011020 transcript:EMLSAT00000011020 description:"snap_masked-LSalAtl2s741-processed-gene-2.19")

HSP 1 Score: 64.3142 bits (155), Expect = 4.757e-16
Identity = 32/46 (69.57%), Postives = 36/46 (78.26%), Query Frame = 0 
Query:   16 IVPRHLQLAIRNDEELNKLLQGVTIAQGGVLPNIQAVLLPKKSAKK 61
            I+  HLQLAIR D+EL KLL GVTIA  G+L NIQAVLLPKK  +K
Sbjct:   36 IIHCHLQLAIRRDKELKKLLAGVTIAHCGILHNIQAVLLPKKKTEK 81
[Close]
BLAST of histone h2a- partial vs. L. salmonis genes
Match: EMLSAG00000008130 (supercontig:LSalAtl2s:LSalAtl2s484:362061:414899:-1 gene:EMLSAG00000008130 transcript:EMLSAT00000008130 description:"augustus_masked-LSalAtl2s484-processed-gene-3.0")

HSP 1 Score: 64.3142 bits (155), Expect = 1.649e-15
Identity = 31/46 (67.39%), Postives = 35/46 (76.09%), Query Frame = 0 
Query:   16 IVPRHLQLAIRNDEELNKLLQGVTIAQGGVLPNIQAVLLPKKSAKK 61
            I+PRHL LAIRNDEEL KLL   +I QG + PNI AVLLPKK+ K 
Sbjct:   91 IIPRHLLLAIRNDEELKKLLASXSILQGSIXPNIXAVLLPKKNEKS 136
[Close]
BLAST of histone h2a- partial vs. L. salmonis genes
Match: EMLSAG00000003537 (supercontig:LSalAtl2s:LSalAtl2s193:353311:359396:-1 gene:EMLSAG00000003537 transcript:EMLSAT00000003537 description:"augustus-LSalAtl2s193-processed-gene-3.2")

HSP 1 Score: 60.4622 bits (145), Expect = 8.621e-14
Identity = 32/45 (71.11%), Postives = 32/45 (71.11%), Query Frame = 0 
Query:   16 IVPRHLQLAIRNDEELNKLLQGVTIAQGGVLPNIQAVLLPKKSAK 60
            I   HLQL I ND ELNKLL G TIAQGGVLPNIQAV  P K  K
Sbjct:  118 IFTLHLQLVICNDGELNKLLAGETIAQGGVLPNIQAVTWPYKMDK 162
[Close]
BLAST of histone h2a- partial vs. L. salmonis genes
Match: EMLSAG00000001981 (supercontig:LSalAtl2s:LSalAtl2s1352:73992:74474:1 gene:EMLSAG00000001981 transcript:EMLSAT00000001981 description:"augustus_masked-LSalAtl2s1352-processed-gene-0.2")

HSP 1 Score: 52.7582 bits (125), Expect = 7.332e-11
Identity = 26/42 (61.90%), Postives = 32/42 (76.19%), Query Frame = 0 
Query:   16 IVPRHLQLAIRNDEELNKLLQGVTIAQGGVLPNIQAVLLPKK 57
            I PRHLQLAIR DEEL+ L++  TIA GGV+P+I   L+ KK
Sbjct:  114 ITPRHLQLAIRGDEELDTLIK-ATIAGGGVIPHIHKSLIGKK 154
[Close]
BLAST of histone h2a- partial vs. L. salmonis genes
Match: EMLSAG00000011210 (supercontig:LSalAtl2s:LSalAtl2s764:15439:16885:-1 gene:EMLSAG00000011210 transcript:EMLSAT00000011210 description:"snap-LSalAtl2s764-processed-gene-0.19")

HSP 1 Score: 43.5134 bits (101), Expect = 6.830e-8
Identity = 22/30 (73.33%), Postives = 23/30 (76.67%), Query Frame = 0 
Query:   21 LQLAIRNDEELNKLLQGVTIAQGGVLPNIQ 50
            L LAI  DEEL+KL  GV IAQ GVLPNIQ
Sbjct:   12 LSLAIYKDEELSKLKAGVRIAQSGVLPNIQ 41
[Close]
BLAST of histone h2a- partial vs. SwissProt
Match: gi|122013|sp|P27325.2|H2A_URECA (RecName: Full=Histone H2A)

HSP 1 Score: 87.0409 bits (214), Expect = 3.920e-23
Identity = 42/46 (91.30%), Postives = 45/46 (97.83%), Query Frame = 0 
Query:   16 IVPRHLQLAIRNDEELNKLLQGVTIAQGGVLPNIQAVLLPKKSAKK 61
            I+PRHLQLAIRNDEELNKLL GVTIAQGGVLPNIQAVLLPKKS++K
Sbjct:   78 IIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKSSQK 123
[Close]
BLAST of histone h2a- partial vs. SwissProt
Match: gi|61213116|sp|Q6PV61.3|H2A_LITVA (RecName: Full=Histone H2A)

HSP 1 Score: 87.0409 bits (214), Expect = 4.238e-23
Identity = 43/46 (93.48%), Postives = 44/46 (95.65%), Query Frame = 0 
Query:   16 IVPRHLQLAIRNDEELNKLLQGVTIAQGGVLPNIQAVLLPKKSAKK 61
            IVPRHLQLAIRNDEELNKLL GVTIAQGGVLPNIQAVLLPKK+ KK
Sbjct:   78 IVPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKK 123
[Close]
BLAST of histone h2a- partial vs. SwissProt
Match: gi|50402136|sp|P84051.2|H2A_DROME (RecName: Full=Histone H2A >gi|50402137|sp|P84052.2|H2A_DROER RecName: Full=Histone H2A >gi|50402138|sp|P84053.2|H2A_DROHY RecName: Full=Histone H2A >gi|50402139|sp|P84054.2|H2A_DROSI RecName: Full=Histone H2A >gi|50402140|sp|P84055.2|H2A_DROYA RecName: Full=Histone H2A >gi|50402141|sp|P84056.2|H2A_RHYAM RecName: Full=Histone H2A >gi|50402142|sp|P84057.2|H2A_TIGCA RecName: Full=Histone H2A)

HSP 1 Score: 86.6557 bits (213), Expect = 6.959e-23
Identity = 42/46 (91.30%), Postives = 44/46 (95.65%), Query Frame = 0 
Query:   16 IVPRHLQLAIRNDEELNKLLQGVTIAQGGVLPNIQAVLLPKKSAKK 61
            I+PRHLQLAIRNDEELNKLL GVTIAQGGVLPNIQAVLLPKK+ KK
Sbjct:   78 IIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKK 123
[Close]
BLAST of histone h2a- partial vs. SwissProt
Match: gi|121977|sp|P09589.1|H2A3_LYTPI (RecName: Full=Histone H2A, sperm)

HSP 1 Score: 85.8853 bits (211), Expect = 7.904e-23
Identity = 42/47 (89.36%), Postives = 44/47 (93.62%), Query Frame = 0 
Query:   16 IVPRHLQLAIRNDEELNKLLQGVTIAQGGVLPNIQAVLLPKKSAKKE 62
            I+PRHLQLAIRNDEELNKLL GVTIAQGGVLPNIQAVLLPKK+AK  
Sbjct:   65 IIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKTAKSS 111
[Close]
BLAST of histone h2a- partial vs. SwissProt
Match: gi|59799575|sp|P69141.2|H2A_STRPU (RecName: Full=Histone H2A, embryonic >gi|59799589|sp|P69142.2|H2AE_PSAMI RecName: Full=Histone H2A, embryonic)

HSP 1 Score: 86.2705 bits (212), Expect = 8.378e-23
Identity = 41/47 (87.23%), Postives = 44/47 (93.62%), Query Frame = 0 
Query:   16 IVPRHLQLAIRNDEELNKLLQGVTIAQGGVLPNIQAVLLPKKSAKKE 62
            I+PRHLQLA+RNDEELNKLL GVTIAQGGVLPNIQAVLLPKK+AK  
Sbjct:   78 IIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKTAKSS 124
[Close]
BLAST of histone h2a- partial vs. SwissProt
Match: gi|462233|sp|P35061.2|H2A_ACRFO (RecName: Full=Histone H2A)

HSP 1 Score: 86.2705 bits (212), Expect = 8.510e-23
Identity = 41/47 (87.23%), Postives = 45/47 (95.74%), Query Frame = 0 
Query:   16 IVPRHLQLAIRNDEELNKLLQGVTIAQGGVLPNIQAVLLPKKSAKKE 62
            I+PRHLQLA+RNDEELNKLL GVTIAQGGVLPNIQAVLLPKK+ KK+
Sbjct:   78 IIPRHLQLAVRNDEELNKLLAGVTIAQGGVLPNIQAVLLPKKTEKKQ 124
[Close]
BLAST of histone h2a- partial vs. SwissProt
Match: gi|121962|sp|P04735.2|H2A1_PSAMI (RecName: Full=Late histone H2A.1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.070e-22
Identity = 41/45 (91.11%), Postives = 44/45 (97.78%), Query Frame = 0 
Query:   16 IVPRHLQLAIRNDEELNKLLQGVTIAQGGVLPNIQAVLLPKKSAK 60
            I+PRHLQLA+RNDEELNKLL GVTIAQGGVLPNIQAVLLPKK+AK
Sbjct:   78 IIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKTAK 122
[Close]
BLAST of histone h2a- partial vs. SwissProt
Match: gi|121987|sp|P16886.2|H2AL_STRPU (RecName: Full=Late histone H2A.L3)

HSP 1 Score: 85.8853 bits (211), Expect = 1.352e-22
Identity = 40/45 (88.89%), Postives = 44/45 (97.78%), Query Frame = 0 
Query:   16 IVPRHLQLAIRNDEELNKLLQGVTIAQGGVLPNIQAVLLPKKSAK 60
            I+PRHLQLA+RNDEELNKLL GVTIAQGGVLPNIQAVLLPKK++K
Sbjct:   79 IIPRHLQLAVRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTSK 123
[Close]
BLAST of histone h2a- partial vs. SwissProt
Match: gi|122008|sp|P19178.2|H2A_PLADU (RecName: Full=Histone H2A)

HSP 1 Score: 85.5001 bits (210), Expect = 1.819e-22
Identity = 41/45 (91.11%), Postives = 43/45 (95.56%), Query Frame = 0 
Query:   16 IVPRHLQLAIRNDEELNKLLQGVTIAQGGVLPNIQAVLLPKKSAK 60
            I+PRHLQLAIRNDEELNKLL GVTIAQGGVLPNIQAVLLPKK+ K
Sbjct:   78 IIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTTK 122
[Close]
BLAST of histone h2a- partial vs. SwissProt
Match: gi|122044770|sp|P02269.2|H2A_ASTRU (RecName: Full=Histone H2A)

HSP 1 Score: 85.5001 bits (210), Expect = 1.888e-22
Identity = 42/45 (93.33%), Postives = 43/45 (95.56%), Query Frame = 0 
Query:   16 IVPRHLQLAIRNDEELNKLLQGVTIAQGGVLPNIQAVLLPKKSAK 60
            I PRHLQLAIRNDEELNKLL GVTIAQGGVLPNIQAVLLPKK+AK
Sbjct:   78 INPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTAK 122
[Close]
BLAST of histone h2a- partial vs. nr
Match: gi|926622667|ref|XP_013776729.1| (histone H2A [Limulus polyphemus])

HSP 1 Score: 88.5817 bits (218), Expect = 3.759e-21
Identity = 43/47 (91.49%), Postives = 45/47 (95.74%), Query Frame = 0 
Query:   16 IVPRHLQLAIRNDEELNKLLQGVTIAQGGVLPNIQAVLLPKKSAKKE 62
            I+PRHLQLAIRNDEELNKLLQGVTIAQGGVLPNIQAVLLPKK+ KK 
Sbjct:   78 IIPRHLQLAIRNDEELNKLLQGVTIAQGGVLPNIQAVLLPKKTEKKS 124
[Close]
BLAST of histone h2a- partial vs. nr
Match: gi|189099012|gb|ACD76748.1| (female neotenic-specific protein 9, partial [Cryptotermes secundus])

HSP 1 Score: 86.6557 bits (213), Expect = 4.106e-21
Identity = 43/51 (84.31%), Postives = 46/51 (90.20%), Query Frame = 0 
Query:   12 LGGXIVPRHLQLAIRNDEELNKLLQGVTIAQGGVLPNIQAVLLPKKSAKKE 62
            L   I+PRHLQLAIRNDEELNKLL GVTIAQGGVLPNIQAVLLPKK+ KK+
Sbjct:   17 LKSRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKKK 67
[Close]
BLAST of histone h2a- partial vs. nr
Match: gi|1121089775|ref|XP_019533532.1| (PREDICTED: histone H2A [Aedes albopictus] >gi|1121161941|ref|XP_019526538.1| PREDICTED: histone H2A [Aedes albopictus])

HSP 1 Score: 88.1965 bits (217), Expect = 4.333e-21
Identity = 42/47 (89.36%), Postives = 45/47 (95.74%), Query Frame = 0 
Query:   16 IVPRHLQLAIRNDEELNKLLQGVTIAQGGVLPNIQAVLLPKKSAKKE 62
            I+PRHLQLAIRNDEELNKL+ GVTIAQGGVLPNIQAVLLPKK+ KKE
Sbjct:   78 IIPRHLQLAIRNDEELNKLMSGVTIAQGGVLPNIQAVLLPKKTEKKE 124
[Close]
BLAST of histone h2a- partial vs. nr
Match: gi|195363724|ref|XP_002045586.1| (GM13612 [Drosophila sechellia] >gi|194131609|gb|EDW53652.1| GM13612 [Drosophila sechellia])

HSP 1 Score: 86.6557 bits (213), Expect = 4.592e-21
Identity = 42/46 (91.30%), Postives = 44/46 (95.65%), Query Frame = 0 
Query:   16 IVPRHLQLAIRNDEELNKLLQGVTIAQGGVLPNIQAVLLPKKSAKK 61
            I+PRHLQLAIRNDEELNKLL GVTIAQGGVLPNIQAVLLPKK+ KK
Sbjct:   24 IIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKK 69
[Close]
BLAST of histone h2a- partial vs. nr
Match: gi|1037078458|ref|XP_016983667.1| (PREDICTED: histone H2A-like, partial [Drosophila rhopaloa])

HSP 1 Score: 86.6557 bits (213), Expect = 4.612e-21
Identity = 42/46 (91.30%), Postives = 44/46 (95.65%), Query Frame = 0 
Query:   16 IVPRHLQLAIRNDEELNKLLQGVTIAQGGVLPNIQAVLLPKKSAKK 61
            I+PRHLQLAIRNDEELNKLL GVTIAQGGVLPNIQAVLLPKK+ KK
Sbjct:   25 IIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKK 70
[Close]
BLAST of histone h2a- partial vs. nr
Match: gi|195066395|ref|XP_001996806.1| (GH23338 [Drosophila grimshawi] >gi|195076784|ref|XP_001997207.1| GH10160 [Drosophila grimshawi] >gi|195356594|ref|XP_002044744.1| GM19710 [Drosophila sechellia] >gi|195361639|ref|XP_002045508.1| GM11652 [Drosophila sechellia] >gi|195361730|ref|XP_002045516.1| GM26663 [Drosophila sechellia] >gi|195362917|ref|XP_002045563.1| GM11682 [Drosophila sechellia] >gi|195369619|ref|XP_002045844.1| GM18731 [Drosophila sechellia] >gi|512939362|ref|XP_004934221.1| histone H2A-like, partial [Bombyx mori] >gi|1101369082|ref|XP_018915881.1| PREDICTED: histone H2A-like, partial [Bemisia tabaci] >gi|1189079453|ref|XP_020807817.1| histone H2A-like [Drosophila serrata] >gi|1200712179|ref|XP_004921551.2| histone H2A [Bombyx mori] >gi|1200742116|ref|XP_004934047.2| histone H2A-like [Bombyx mori] >gi|193895150|gb|EDV94016.1| GH23338 [Drosophila grimshawi] >gi|193906285|gb|EDW05152.1| GH10160 [Drosophila grimshawi] >gi|194121560|gb|EDW43603.1| GM18731 [Drosophila sechellia] >gi|194128967|gb|EDW51010.1| GM11652 [Drosophila sechellia] >gi|194128986|gb|EDW51029.1| GM26663 [Drosophila sechellia] >gi|194130667|gb|EDW52710.1| GM11682 [Drosophila sechellia] >gi|194134901|gb|EDW56417.1| GM19710 [Drosophila sechellia] >gi|194202342|gb|EDX15918.1| GD23971 [Drosophila simulans] >gi|194202390|gb|EDX15966.1| GD21118 [Drosophila simulans] >gi|194202560|gb|EDX16136.1| GD13986 [Drosophila simulans] >gi|607348856|gb|EZA46552.1| Histone H2A [Ooceraea biroi] >gi|930681984|gb|KPJ21524.1| Histone H2A [Papilio machaon] >gi|1000070832|gb|KXJ42088.1| hypothetical protein RP20_CCG028388 [Aedes albopictus])

HSP 1 Score: 86.6557 bits (213), Expect = 5.013e-21
Identity = 42/46 (91.30%), Postives = 44/46 (95.65%), Query Frame = 0 
Query:   16 IVPRHLQLAIRNDEELNKLLQGVTIAQGGVLPNIQAVLLPKKSAKK 61
            I+PRHLQLAIRNDEELNKLL GVTIAQGGVLPNIQAVLLPKK+ KK
Sbjct:   24 IIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKK 69
[Close]
BLAST of histone h2a- partial vs. nr
Match: gi|195365072|ref|XP_002045641.1| (GM13123 [Drosophila sechellia] >gi|194133127|gb|EDW54675.1| GM13123 [Drosophila sechellia])

HSP 1 Score: 86.6557 bits (213), Expect = 5.068e-21
Identity = 42/46 (91.30%), Postives = 44/46 (95.65%), Query Frame = 0 
Query:   16 IVPRHLQLAIRNDEELNKLLQGVTIAQGGVLPNIQAVLLPKKSAKK 61
            I+PRHLQLAIRNDEELNKLL GVTIAQGGVLPNIQAVLLPKK+ KK
Sbjct:   24 IIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKK 69
[Close]
BLAST of histone h2a- partial vs. nr
Match: gi|1178008693|gb|ORD93233.1| (H2A [Enterospora canceri])

HSP 1 Score: 86.2705 bits (212), Expect = 5.158e-21
Identity = 42/46 (91.30%), Postives = 44/46 (95.65%), Query Frame = 0 
Query:   16 IVPRHLQLAIRNDEELNKLLQGVTIAQGGVLPNIQAVLLPKKSAKK 61
            I+PRHLQLAIRNDEELNKLL GVTIAQGGVLPNIQAVLLPKK+ KK
Sbjct:   24 IIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKK 69
[Close]
BLAST of histone h2a- partial vs. nr
Match: gi|1229891869|ref|XP_022166392.1| (histone H2A-like, partial [Myzus persicae])

HSP 1 Score: 86.2705 bits (212), Expect = 5.340e-21
Identity = 42/46 (91.30%), Postives = 44/46 (95.65%), Query Frame = 0 
Query:   16 IVPRHLQLAIRNDEELNKLLQGVTIAQGGVLPNIQAVLLPKKSAKK 61
            I+PRHLQLAIRNDEELNKLL GVTIAQGGVLPNIQAVLLPKK+ KK
Sbjct:   15 IIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKK 60
[Close]
BLAST of histone h2a- partial vs. nr
Match: gi|1036700521|ref|XP_017056283.1| (PREDICTED: histone H2A-like, partial [Drosophila ficusphila])

HSP 1 Score: 86.2705 bits (212), Expect = 5.562e-21
Identity = 42/46 (91.30%), Postives = 44/46 (95.65%), Query Frame = 0 
Query:   16 IVPRHLQLAIRNDEELNKLLQGVTIAQGGVLPNIQAVLLPKKSAKK 61
            I+PRHLQLAIRNDEELNKLL GVTIAQGGVLPNIQAVLLPKK+ KK
Sbjct:   14 IIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKK 59
The following BLAST results are available for this feature:
BLAST of histone h2a- partial vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 9
Match NameE-valueIdentityDescription
EMLSAG000000125112.266e-2395.35supercontig:LSalAtl2s:LSalAtl2s921:217466:218531:-... [more]
EMLSAG000000075618.516e-2386.96supercontig:LSalAtl2s:LSalAtl2s436:406900:407148:1... [more]
EMLSAG000000011081.590e-2288.89supercontig:LSalAtl2s:LSalAtl2s1185:74095:74469:1 ... [more]
EMLSAG000000056412.224e-1980.43supercontig:LSalAtl2s:LSalAtl2s303:362466:370455:1... [more]
EMLSAG000000110204.757e-1669.57supercontig:LSalAtl2s:LSalAtl2s741:230720:233818:-... [more]
EMLSAG000000081301.649e-1567.39supercontig:LSalAtl2s:LSalAtl2s484:362061:414899:-... [more]
EMLSAG000000035378.621e-1471.11supercontig:LSalAtl2s:LSalAtl2s193:353311:359396:-... [more]
EMLSAG000000019817.332e-1161.90supercontig:LSalAtl2s:LSalAtl2s1352:73992:74474:1 ... [more]
EMLSAG000000112106.830e-873.33supercontig:LSalAtl2s:LSalAtl2s764:15439:16885:-1 ... [more]
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BLAST of histone h2a- partial vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
gi|122013|sp|P27325.2|H2A_URECA3.920e-2391.30RecName: Full=Histone H2A[more]
gi|61213116|sp|Q6PV61.3|H2A_LITVA4.238e-2393.48RecName: Full=Histone H2A[more]
gi|50402136|sp|P84051.2|H2A_DROME6.959e-2391.30RecName: Full=Histone H2A >gi|50402137|sp|P84052.2... [more]
gi|121977|sp|P09589.1|H2A3_LYTPI7.904e-2389.36RecName: Full=Histone H2A, sperm[more]
gi|59799575|sp|P69141.2|H2A_STRPU8.378e-2387.23RecName: Full=Histone H2A, embryonic >gi|59799589|... [more]
gi|462233|sp|P35061.2|H2A_ACRFO8.510e-2387.23RecName: Full=Histone H2A[more]
gi|121962|sp|P04735.2|H2A1_PSAMI1.070e-2291.11RecName: Full=Late histone H2A.1[more]
gi|121987|sp|P16886.2|H2AL_STRPU1.352e-2288.89RecName: Full=Late histone H2A.L3[more]
gi|122008|sp|P19178.2|H2A_PLADU1.819e-2291.11RecName: Full=Histone H2A[more]
gi|122044770|sp|P02269.2|H2A_ASTRU1.888e-2293.33RecName: Full=Histone H2A[more]

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BLAST of histone h2a- partial vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|926622667|ref|XP_013776729.1|3.759e-2191.49histone H2A [Limulus polyphemus][more]
gi|189099012|gb|ACD76748.1|4.106e-2184.31female neotenic-specific protein 9, partial [Crypt... [more]
gi|1121089775|ref|XP_019533532.1|4.333e-2189.36PREDICTED: histone H2A [Aedes albopictus] >gi|1121... [more]
gi|195363724|ref|XP_002045586.1|4.592e-2191.30GM13612 [Drosophila sechellia] >gi|194131609|gb|ED... [more]
gi|1037078458|ref|XP_016983667.1|4.612e-2191.30PREDICTED: histone H2A-like, partial [Drosophila r... [more]
gi|195066395|ref|XP_001996806.1|5.013e-2191.30GH23338 [Drosophila grimshawi] >gi|195076784|ref|X... [more]
gi|195365072|ref|XP_002045641.1|5.068e-2191.30GM13123 [Drosophila sechellia] >gi|194133127|gb|ED... [more]
gi|1178008693|gb|ORD93233.1|5.158e-2191.30H2A [Enterospora canceri][more]
gi|1229891869|ref|XP_022166392.1|5.340e-2191.30histone H2A-like, partial [Myzus persicae][more]
gi|1036700521|ref|XP_017056283.1|5.562e-2191.30PREDICTED: histone H2A-like, partial [Drosophila f... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold791_size96783supercontigscaffold791_size96783:75700..76062 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
Note-
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold791_size96783-snap-gene-0.25-mRNA-1maker-scaffold791_size96783-snap-gene-0.25-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold791_size96783:75700..76062+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold791_size96783-snap-gene-0.25 ID=maker-scaffold791_size96783-snap-gene-0.25|Name=histone h2a- partial|organism=Tigriopus kingsejongensis|type=gene|length=363bp|location=Sequence derived from alignment at scaffold791_size96783:75700..76062+ (Tigriopus kingsejongensis)
ATGAGTAAATTTTGTTCAGAATAGATGAGGAACTCGATTAGTAGTATAGA
TAAGTAACTGCTTTTGAAACTGGATTATTCAGCAAAAGTTTCAAGCACAC
TCGCTACCTTTCAAGCCTTTGAGGTCGCGAGGATGTCAACCATCCGGGTC
AATGTACAGTTAAGTTGTGGCCCTTCAGGGTATGGCCAGCGAACCCTGAT
CAGGCCATTGGGCGGGANCATCGTGCCACGACACCTTCAATTGGCCATCC
GGAACGACGAGGAACTCAACAAGCTTCTCCAAGGCGTGACCATCGCCCAG
GGTGGCGTCTTGCCCAACATCCAGGCTGTCCTCTTGCCCAAGAAGTCGGC
CAAGAAGGAATAA
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Synonyms
The feature 'histone h2a- partial' has the following synonyms
Synonym
Tk03155
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