zgc:103474 protein, maker-scaffold798_size95657-snap-gene-0.31 (gene) Tigriopus kingsejongensis

Overview
Namezgc:103474 protein
Unique Namemaker-scaffold798_size95657-snap-gene-0.31
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of zgc:103474 protein vs. nr
Match: gi|1325270026|ref|XP_023319593.1| (uncharacterized protein LOC111694799 [Eurytemora affinis])

HSP 1 Score: 74.7146 bits (182), Expect = 3.655e-12
Identity = 37/107 (34.58%), Postives = 63/107 (58.88%), Query Frame = 0 
Query:    1 MAVPDSWTQVPGFPIASQSYNATTSGSNTSLSYVLPSSYFESIANISQIEFVPLTTGQLMIDIVSPVC----DSGLS-----WCALIRACTASCATHLESQNMFDAQ 98
            + VPD +  +PG P+ +QS+N T + ++   S+++ S+YF+ + NIS+IE+VP T G  ++D++ P C    D   S     WC L  AC  +C + L+ Q  +D +
Sbjct:  411 LKVPDQFIFIPGGPLKTQSWNHTLALNSQGSSFIIQSTYFKFMGNISEIEYVPATAGTFLVDVIYPECPVVRDPAGSWVQTWWCPLTGACEINCLSTLQMQEDWDTE 517
The following BLAST results are available for this feature:
BLAST of zgc:103474 protein vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of zgc:103474 protein vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of zgc:103474 protein vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 1
Match NameE-valueIdentityDescription
gi|1325270026|ref|XP_023319593.1|3.655e-1234.58uncharacterized protein LOC111694799 [Eurytemora a... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold798_size95657supercontigscaffold798_size95657:26312..28150 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
NoteF:microtubule binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold798_size95657-snap-gene-0.31-mRNA-1maker-scaffold798_size95657-snap-gene-0.31-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold798_size95657:26312..28150-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold798_size95657-snap-gene-0.31 ID=maker-scaffold798_size95657-snap-gene-0.31|Name=zgc:103474 protein|organism=Tigriopus kingsejongensis|type=gene|length=1839bp|location=Sequence derived from alignment at scaffold798_size95657:26312..28150- (Tigriopus kingsejongensis)
ATGGCTGTCCCAGGTAGGTTCCCCAGGGGCTCTTAAGGCTAGTTGGACAT
TGGGTAAAATATGAGAATTGTCCCCTTGCAGATTCGTGGACCCAAGTTCC
TGGGTTCCCCATTGCCAGCCAATCCTACAATGCCACCACCTCAGGGTCGA
ACACAAGCCTCTCCTACGTTCTGCCCTCGTCTTACTTTGAGAGCATCGCC
AACATCTCCCAGATCGAGTTCGTGCCCCTAACGACTGGACAATTGATGAT
TGACGTAAACCCTCCATCTTTTTTTACGACCAAGTCTATCGTCTTCACTC
GAATCCGCTGACATTCTCATTTCCAGATTGTCAGCCCCGTGTGTGACAGT
GGGCTCTCTTGGTGCGCACTCATTCGAGCTTGCACAGCCTCGTGTGCCAC
CCATTTAGAGTCCCAAAACATGTTTGATGCCCAGCACACTTGCCAACCCG
GATCAGGAGTGGCGTTTTGCTCCGTGGAAAGCACTTGCAATGCAGAGCTC
ACGTGTCCCGCGTTCGCTGGTAAATTCATACACCACTGTCAGACTCTCAG
GAGGTCCCCTTGGGTTTGAAATTTGTGTCGGGCATAATTGGTGCAAGGTT
GCGAGAGCGATGTTCCGTGTTGCTGAGCCAATTTCTAAGGTCGCTTATGA
CAGAACTTTCAAATCCAAGTCATTTCTGATGACGTCGGGAATATACAGTA
TGCGCTCGAATCGATCGAAAAGGTATTTCGGGGTGAAATGACATTTTTGG
GGTTTGGGAGCAATGGAACAAAGAAACCCTATCGCGAATTTGCAAGTTCT
CTTTCACTTTACCCATTTTGTAATTAATTGAAATCGATTTTAGGGATAAT
CAAGTGGTATTTGAAATAATTTGAATATTCCCGATCCTTACATGAGTTGA
TCCATTTTGACATTAAAAGCGCCAACCTTGCTGAAATTGCTCCAAGTGGT
CGCCGAAACATTTTTTAAGCTCAAGCGAATTGGATAAGAAATGGTCATAG
GGTGCAAGCAAGAGGGGTTCTCGAAAGTTACCCTTTGAAGCCTAATAAAT
AGATTTTTACAGCCCACCGGGTGACGAGAAATCCAAGCAATGTGACACGC
CCATAGTACTGTAGCAGCACTAAGTTTGGTGCATATCAACCAAAAATATG
TGGATTTCTTCAAAGTGTCCCAAGTACTTATGTTGCTTTACTAATGGCCT
TGTGTGAATTCGTTTGATTTTCATGCGTTGTGCCTCCCTGTCTTAATTTA
CCTAGTGCCTTCGGCAAAGTTATGTTTTGTTATTCTCTAGAGTATTCTCG
TTCTGTAAATCGGGTTTTTTGTTCTGTTTCGTATAGTTATGTTTTTGATA
GTTTGATTCCTGTACAGAAATGTTTTTGATATACTGTAGTTTGATTCCTG
TATAGTATACAGTACTGTTTTAGTATTGCATTTGTTGCGTTCAGTTTAAC
ATATATTTCTTTATAAAATGTCCAAACAGTATTGGCTAGCATTTGTTGGC
TAATGCTGACTCCCGGGCATAAACCTATTTTAAATGTATGTAGAAATAAA
TATGATTACGCACACTCAAGGTGAGCGATGTAACAAGAGGTCGAATTGTT
TTTCAGATGCTGTTTCGGCACCCATCGCCTACGAAGTGAAAGAGAGTATT
ACTATCCCAGCGAATCCCGGGCAAGAAGGCAAAAAGCAGATCCATCGCCT
GACGAAGACTTTGGCCACTTCCGCGGATGATGTGGACGAAGCTTTCATTG
GATTCAAGCTCCACCAAGAGGAATCCTGGACCGGAGGCCACTTTTTGGCC
GTCCGTTGCGAGACTTCACCTTGCGTTATGCTCCCCATA
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Synonyms
The feature 'zgc:103474 protein' has the following synonyms
Synonym
Tk09159
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