rho-related gtp-binding isoform x1, maker-scaffold79_size400133-snap-gene-2.14 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of rho-related gtp-binding isoform x1 vs. L. salmonis genes
Match: EMLSAG00000000691 (supercontig:LSalAtl2s:LSalAtl2s110:223932:225715:1 gene:EMLSAG00000000691 transcript:EMLSAT00000000691 description:"maker-LSalAtl2s110-augustus-gene-2.2") HSP 1 Score: 162.54 bits (410), Expect = 6.328e-51 Identity = 79/184 (42.93%), Postives = 114/184 (61.96%), Query Frame = 0 Query: 17 LDP--VKIVIVGEGGAGKTSVLMGYKNKKISLEWIPTVFDNYIIKVPVNDQEIRVNLWDTAGQEAYDKLRTVTYDGAKLFLLCFDIASPYSLEQIPKKWAPEVRGFTKAPIFLVGNKKDLREDEEIITKLQEQNLSPVTYNEGMKVAKQIGAQQYMECSALKLEGLDELFEKAAKAALPPSRPA 198 DP +K V+VG+G GKT +L+ Y K E++PTVFDNY++ V + D + L+DTAGQE YD LR + Y +FL+CF + P S + +KW+ EV+ + KAPI LVG + DLR DE+ L + P+T +G +AK+IGA +Y ECSA+ GL ++F++A A L RP+ Sbjct: 4 FDPKTIKCVVVGDGAVGKTCMLISYATDKFPQEYVPTVFDNYMVNVMIGDDPYTLGLFDTAGQEDYDNLRHLCYPNTDIFLVCFSVIRPNSFANVRQKWSSEVKKYYKAPILLVGTQVDLRNDEKTKEALSKCKQKPITEEQGRSLAKEIGAVRYSECSAITQNGLKDVFDEAIIAVL--ERPS 185
BLAST of rho-related gtp-binding isoform x1 vs. L. salmonis genes
Match: EMLSAG00000006917 (supercontig:LSalAtl2s:LSalAtl2s391:521398:525466:1 gene:EMLSAG00000006917 transcript:EMLSAT00000006917 description:"maker-LSalAtl2s391-augustus-gene-5.30") HSP 1 Score: 157.918 bits (398), Expect = 3.066e-49 Identity = 75/182 (41.21%), Postives = 112/182 (61.54%), Query Frame = 0 Query: 19 PVKIVIVGEGGAGKTSVLMGYKNKKISLEWIPTVFDNYIIKVPVNDQEIRVNLWDTAGQEAYDKLRTVTYDGAKLFLLCFDIASPYSLEQIPKKWAPEVRGFT-KAPIFLVGNKKDLREDEEIITKLQEQNLSPVTYNEGMKVAKQIGAQQYMECSALKLEGLDELFEKAAKAALPPSRPAR 199 P+K V+VG+G GKT +L+ Y E++PTVFDNY + + + + LWDTAGQE D+LR ++Y +FL+ F + SP S E + KW PE++ API LVG K DLRED+E + L + +P+ +G K+ +I A +Y+ECSAL GL ++F++A ++ L P +P R Sbjct: 6 PIKCVVVGDGTVGKTCMLISYTTDSFPGEYVPTVFDNYSAPMVCDGVPVSLGLWDTAGQEDXDRLRPLSYPQTDVFLITFSVVSPSSFENVTSKWCPEIKHHCADAPILLVGTKIDLREDKETLQALADAGQAPIKREQGQKLCNKIRAVKYLECSALTQRGLKQVFDEAVRSVLRP-QPVR 186
BLAST of rho-related gtp-binding isoform x1 vs. L. salmonis genes
Match: EMLSAG00000001745 (supercontig:LSalAtl2s:LSalAtl2s12:127607:129096:-1 gene:EMLSAG00000001745 transcript:EMLSAT00000001745 description:"maker-LSalAtl2s12-snap-gene-1.31") HSP 1 Score: 150.214 bits (378), Expect = 5.443e-46 Identity = 81/180 (45.00%), Postives = 111/180 (61.67%), Query Frame = 0 Query: 2 ENIPSQRSDKMSTLVLDPVKIVIVGEGGAGKTSVLMGYKNKKISLEWIPTVFDNYIIKVPVNDQEIRVNLWDTAGQEAYDKLRTVTYDGAKLFLLCFDIASPYSLEQIPKKWAPEVRGFT-KAPIFLVGNKKDLREDEEIITKLQEQNLSPVTYNEGMKVAKQIGAQQYMECSALKLEGL 180 +N +R +KM+ + K+VIVG+G GKT +L+ + + ++PTVF+NY V D E+ + LWDTAGQE YD+LR ++Y + L+CF I SP SLE IP+KW PEV+ F PI LVGNKKDLR D I +L + PV +G +A++I A Y+ECSA EGL Sbjct: 48 DNCYKRRLNKMAAIR---KKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-----VADIEVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPNTIKELGKMKQEPVKPEDGRTMAEKINAFAYLECSAKSKEGL 219
BLAST of rho-related gtp-binding isoform x1 vs. L. salmonis genes
Match: EMLSAG00000002241 (supercontig:LSalAtl2s:LSalAtl2s1425:37157:38278:-1 gene:EMLSAG00000002241 transcript:EMLSAT00000002241 description:"maker-LSalAtl2s1425-augustus-gene-0.6") HSP 1 Score: 147.517 bits (371), Expect = 5.083e-45 Identity = 75/183 (40.98%), Postives = 106/183 (57.92%), Query Frame = 0 Query: 20 VKIVIVGEGGAGKTSVLMGYKNKKISLEWIPTVFDNYIIKVPVNDQEIRVNLWDTAGQEAYDKLRTVTYDGAKLFLLCFDIASPYSLEQIPKKWAPEVRGFTKAPIFLVGNKKDLREDEEIITKLQEQNLSPVTYNEGMKVAKQIGAQQYMECSALKLEGLDELFEKAAKAALPPSRPARFCA 202 +K+V+VG+G GKTS+L+ Y PTVFD + ++ +I++NLWDTAGQE YD+LR + Y A +FLLCF + S SL KWAPE+ + AP+ L+G K DLR+D I+K EG +A+ I +Y+ECS+LK EG+ +FE A A + P + CA Sbjct: 11 IKLVVVGDGAXGKTSLLVSYARNHFPESHDPTVFDCITTSLQRHNIKIKLNLWDTAGQEDYDRLRPLAYHHADVFLLCFALNSNASLYNAKAKWAPELNKHSNAPVLLIGLKADLRKDSNSISK-----------REGSDIARSIKTVKYLECSSLKREGVTTVFESAVDAVILPKKAG--CA 180
BLAST of rho-related gtp-binding isoform x1 vs. L. salmonis genes
Match: EMLSAG00000000880 (supercontig:LSalAtl2s:LSalAtl2s1152:93052:93616:-1 gene:EMLSAG00000000880 transcript:EMLSAT00000000880 description:"maker-LSalAtl2s1152-augustus-gene-0.18") HSP 1 Score: 136.346 bits (342), Expect = 4.620e-41 Identity = 63/160 (39.38%), Postives = 98/160 (61.25%), Query Frame = 0 Query: 17 LDPVKIVIVGEGGAGKTSVLMGYKNKKISLEWIPTVFDNYIIKVPVNDQEIRVNLWDTAGQEAYDKLRTVTYDGAKLFLLCFDIASPYSLEQIPKKWAPEVRGFT-KAPIFLVGNKKDLREDEEIITKLQEQNLSPVTYNEGMKVAKQIGAQQYMECSAL 175 + +K V+VG+G GKT +L+ Y K E++PTVFDNY + V + + + L+DTAGQE YD+LR ++Y +FL+C+ + SP S E + +KW PE+ + P VG + LR++ I KL + P++ G K+AK++ A +Y+ECSAL Sbjct: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCYSVVSPSSYENVREKWVPEISHHCQRTPFLXVGXQIXLRDEAATIEKLTKNKQKPLSMEVGEKLAKELKAVRYVECSAL 160
BLAST of rho-related gtp-binding isoform x1 vs. L. salmonis genes
Match: EMLSAG00000012355 (supercontig:LSalAtl2s:LSalAtl2s903:193189:193806:1 gene:EMLSAG00000012355 transcript:EMLSAT00000012355 description:"augustus_masked-LSalAtl2s903-processed-gene-1.2") HSP 1 Score: 135.961 bits (341), Expect = 1.700e-40 Identity = 66/170 (38.82%), Postives = 100/170 (58.82%), Query Frame = 0 Query: 20 VKIVIVGEGGAGKTSVLMGYKNKKISLEWIPTVFDNYIIKVPVNDQEIRVNLWDTAGQEAYDKLRTVTYDGAKLFLLCFDIASPYSLEQIPKKWAPEV--RGFTKAPIFLVGNKKDLREDEEIITKLQEQNLSPVTYNEGMKVAKQIGAQQYMECSALKLEGLDELFEKA 187 +K V +G+G GKTS+++ Y + E++PT D Y + V V+ + + DT GQE +D LR + Y +F+LCF + SP S + I +KW PE+ R K P+ LVG + DLRED + +L +PVT NE K+A +G + Y+E SAL + L E+F++A Sbjct: 12 IKCVFLGDGAVGKTSLIVAYTTDGYTSEYVPTAIDTYDVVVRVDGVPLTFEMCDTPGQEDFDDLRPLVYPNTDVFILCFSVVSPTSFKNIKEKWIPELKKRSSRKTPVLLVGTQSDLREDVNTLLELNRNYEAPVTENEAKKMASALGCKGYVESSALTQKNLKEIFDEA 181
BLAST of rho-related gtp-binding isoform x1 vs. L. salmonis genes
Match: EMLSAG00000000863 (supercontig:LSalAtl2s:LSalAtl2s1149:7505:31613:1 gene:EMLSAG00000000863 transcript:EMLSAT00000000863 description:"maker-LSalAtl2s1149-augustus-gene-0.4") HSP 1 Score: 120.553 bits (301), Expect = 5.460e-33 Identity = 63/175 (36.00%), Postives = 95/175 (54.29%), Query Frame = 0 Query: 20 VKIVIVGEGGAGKTSVLMGYKNKKISLEWIPTVFDNYIIKVPVNDQEIRVNLWDTAGQEAYDKLRTVTYDGAKLFLLCFDIASPYSLEQIPKKWAPEVRGFT-KAPIFLVGNKKDLREDEEIITKLQEQNLSPVTYNEGMKVAKQIGAQQYMECSALKLEGLDELFEKAAKAALP 193 + +V+VG+ GK++++ S E+ PT FD +K V + + LWDT+G AYD +R++ Y+ A +FLLCF I+ P SL + KW E+R + PI L G + DLR D I L + SPV + + V +I A Y+E S+ + + E+FE A AA P Sbjct: 12 ITVVLVGDTKIGKSALINRITKNAFSQEYTPTSFDKVAVKRNVEGKWLEFALWDTSGCSAYDNVRSLPYEEAHVFLLCFKISDPASLSSVRHKWMKELRRHRPEVPIILCGCQADLRHDPPTIASLSKMGRSPVAPEQALAVCCEIDAVSYVETSSKEGDSFYEVFEVCAHAAPP 186
BLAST of rho-related gtp-binding isoform x1 vs. L. salmonis genes
Match: EMLSAG00000007171 (supercontig:LSalAtl2s:LSalAtl2s403:51534:52749:-1 gene:EMLSAG00000007171 transcript:EMLSAT00000007171 description:"maker-LSalAtl2s403-augustus-gene-0.3") HSP 1 Score: 117.087 bits (292), Expect = 8.101e-32 Identity = 59/181 (32.60%), Postives = 99/181 (54.70%), Query Frame = 0 Query: 13 STLVLDPVKIVIVGEGGAGKTSVLMGYKNKKISLEWIPTVFDNYIIKVPVNDQEIRVNLWDTAGQEAYDKLRTVTYDGAKLFLLCFDIASPYSLEQIPKKWAPEVRGFTKAPIFLVGNKKDLREDEEIITKLQEQNLSPVTYNEGMKVAKQIGAQQYMECSA-LKLEGLDELFEKAAKAAL 192 S L+ D V++ +VG+ GKT++L Y +KK + T F+ V+ + I+ +WDTAG + + R++ A +FLLC+ I+ +L W PE+R + API LVG + DLR D ++++ L Q +PV+ ++ + + +QI + Y+E +A FE AA A+L Sbjct: 8 SGLIRDEVRVTLVGDSRVGKTALLQRYIHKKFVDGYKSTSFEKCSSSSTVSSRRIKFTIWDTAGSHSPNSSRSLAIRNADVFLLCYKISDSNTLFSAINHWTPEIRAVSTAPIILVGCQSDLRSDRDVLSSLARQGRAPVSSDQALTLGQQIACRMYVETTAKHSFTSASSAFEVAALASL 188
BLAST of rho-related gtp-binding isoform x1 vs. L. salmonis genes
Match: EMLSAG00000012715 (supercontig:LSalAtl2s:LSalAtl2s965:433029:434186:-1 gene:EMLSAG00000012715 transcript:EMLSAT00000012715 description:"maker-LSalAtl2s965-snap-gene-3.54") HSP 1 Score: 95.9005 bits (237), Expect = 1.010e-25 Identity = 59/160 (36.88%), Postives = 82/160 (51.25%), Query Frame = 0 Query: 21 KIVIVGEGGAGKTSVLMGYKNKKISLEWIPTVFDNYIIKVPVNDQEIRVNLWDTAGQEAYDKLRTVTYDGAKLFLLCFDIASPYSLEQIPKKWAPEVRGFTKA-PIFLVGNKKDLREDEEIITKLQEQNLSPVTYNEGMKVAKQIGAQQYMECSALKLEG 179 K+V+VG+G GKTS+L TVF I QE YD+LR +TY A + ++CF I P +L + K+W PEVR K PI LVGNK DLR+D +++ L++ +PV + E +A I A + ECSA L+G Sbjct: 11 KLVVVGDGACGKTSLL--------------TVFKTGIF---------------PKSQEFYDRLRILTYP-ADVIIICFAIDRPETLANVRKRWIPEVRQHCKGVPILLVGNKIDLRDDRMVLSNLRKVQKAPVLFAETRSMAYSINATAFHECSAKLLDG 140
BLAST of rho-related gtp-binding isoform x1 vs. L. salmonis genes
Match: EMLSAG00000001832 (supercontig:LSalAtl2s:LSalAtl2s1315:101571:120466:-1 gene:EMLSAG00000001832 transcript:EMLSAT00000001832 description:"maker-LSalAtl2s1315-augustus-gene-1.4") HSP 1 Score: 86.2705 bits (212), Expect = 1.111e-21 Identity = 40/106 (37.74%), Postives = 62/106 (58.49%), Query Frame = 0 Query: 70 NLWDTAGQEAYDKLRTVTYDGAKLFLLCFDIASPYSLEQIPKKWAPEVRGF-TKAPIFLVGNKKDLREDEEIITKLQEQNLSPVTYNEGMKVAKQIGAQQYMECSA 174 ++WDT+G +YD +R+++Y A +FLLC+ I+ P SL + KW+ EVR PI L G +LR D + +L + SPVT + + + +I A Y+E SA Sbjct: 3 SIWDTSGFPSYDAIRSLSYQEADVFLLCYKISDPASLYNVKNKWSAEVRRHRPDVPIILCGXHSELRHDSVTMAQLSKTGRSPVTIEQALAICCEIXAVNYIETSA 108
BLAST of rho-related gtp-binding isoform x1 vs. SwissProt
Match: gi|231710|sp|Q01112.1|CDC42_SCHPO (RecName: Full=Cell division control protein 42 homolog; AltName: Full=CDC42Sp; Flags: Precursor) HSP 1 Score: 168.703 bits (426), Expect = 5.190e-52 Identity = 76/181 (41.99%), Postives = 117/181 (64.64%), Query Frame = 0 Query: 20 VKIVIVGEGGAGKTSVLMGYKNKKISLEWIPTVFDNYIIKVPVNDQEIRVNLWDTAGQEAYDKLRTVTYDGAKLFLLCFDIASPYSLEQIPKKWAPEVRGFTKA-PIFLVGNKKDLREDEEIITKLQEQNLSPVTYNEGMKVAKQIGAQQYMECSALKLEGLDELFEKAAKAALPPSRPAR 199 +K V+VG+G GKT +L+ Y K +++PTVFDNY + V + D+ + L+DTAGQE YD+LR ++Y +FL+CF + SP S E + +KW PEV P +VG + DLR+D + KL Q+ P+T+ +G ++A+++GA +Y+ECSAL +GL +F++A AAL P P + Sbjct: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSDYVPTVFDNYAVTVMIGDEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVTSPASFENVKEKWFPEVHHHCPGVPCLIVGTQIDLRDDPSVQQKLARQHQHPLTHEQGERLARELGAVKYVECSALTQKGLKNVFDEAIVAALDPPVPHK 184
BLAST of rho-related gtp-binding isoform x1 vs. SwissProt
Match: gi|13878932|sp|P34144.2|RAC1A_DICDI (RecName: Full=Rho-related protein rac1A; Flags: Precursor) HSP 1 Score: 168.703 bits (426), Expect = 5.763e-52 Identity = 80/179 (44.69%), Postives = 115/179 (64.25%), Query Frame = 0 Query: 17 LDPVKIVIVGEGGAGKTSVLMGYKNKKISLEWIPTVFDNYIIKVPVNDQEIRVNLWDTAGQEAYDKLRTVTYDGAKLFLLCFDIASPYSLEQIPKKWAPEVRGFT-KAPIFLVGNKKDLREDEEIITKLQEQNLSPVTYNEGMKVAKQIGAQQYMECSALKLEGLDELFEKAAKAALPP 194 + +K V+VG+G GKT +L+ Y E+IPTVFDNY V V+ + I + LWDTAGQE YD+LR ++Y +FL+CF I SP S E + KW PE+ PI LVG K D+RED+E +L+E+ L P++Y +G+ K+I A +Y+ECSAL +GL +F++A +A + P Sbjct: 1 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSIISPSSFENVNGKWHPEICHHAPNVPIILVGTKLDMREDKETQDRLKEKKLYPISYEQGLAKMKEINAVKYLECSALTQKGLKTVFDEAIRAVINP 179
BLAST of rho-related gtp-binding isoform x1 vs. SwissProt
Match: gi|132545|sp|P01122.1|RHO_APLCA (RecName: Full=Ras-like GTP-binding protein RHO; Flags: Precursor) HSP 1 Score: 168.318 bits (425), Expect = 6.176e-52 Identity = 81/173 (46.82%), Postives = 114/173 (65.90%), Query Frame = 0 Query: 21 KIVIVGEGGAGKTSVLMGYKNKKISLEWIPTVFDNYIIKVPVNDQEIRVNLWDTAGQEAYDKLRTVTYDGAKLFLLCFDIASPYSLEQIPKKWAPEVRGFT-KAPIFLVGNKKDLREDEEIITKLQEQNLSPVTYNEGMKVAKQIGAQQYMECSALKLEGLDELFEKAAKAAL 192 K+VIVG+G GKT +L+ + + ++PTVF+NY+ + V+ +++ + LWDTAGQE YD+LR ++Y + L+CF I SP SLE IP+KW PEVR F PI LVGNKKDLR DE +L + PV +G +A++I A Y+ECSA EG+ ++FE A +AAL Sbjct: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVRHFCPNVPIILVGNKKDLRNDESTKRELMKMKQEPVRPEDGRAMAEKINAYSYLECSAKTKEGVRDVFETATRAAL 179
BLAST of rho-related gtp-binding isoform x1 vs. SwissProt
Match: gi|132543|sp|P08134.1|RHOC_HUMAN (RecName: Full=Rho-related GTP-binding protein RhoC; AltName: Full=Rho cDNA clone 9; Short=h9; Flags: Precursor >gi|46397862|sp|Q62159.2|RHOC_MOUSE RecName: Full=Rho-related GTP-binding protein RhoC; AltName: Full=Silica-induced gene 61 protein; Short=SIG-61; Flags: Precursor >gi|75055126|sp|Q5RCK9.1|RHOC_PONAB RecName: Full=Rho-related GTP-binding protein RhoC; Flags: Precursor >gi|119361642|sp|Q1RMJ6.1|RHOC_BOVIN RecName: Full=Rho-related GTP-binding protein RhoC; Flags: Precursor) HSP 1 Score: 168.318 bits (425), Expect = 6.438e-52 Identity = 82/173 (47.40%), Postives = 113/173 (65.32%), Query Frame = 0 Query: 21 KIVIVGEGGAGKTSVLMGYKNKKISLEWIPTVFDNYIIKVPVNDQEIRVNLWDTAGQEAYDKLRTVTYDGAKLFLLCFDIASPYSLEQIPKKWAPEVRGFT-KAPIFLVGNKKDLREDEEIITKLQEQNLSPVTYNEGMKVAKQIGAQQYMECSALKLEGLDELFEKAAKAAL 192 K+VIVG+G GKT +L+ + + ++PTVF+NYI + V+ +++ + LWDTAGQE YD+LR ++Y + L+CF I SP SLE IP+KW PEV+ F PI LVGNKKDLR+DE +L + PV EG +A +I A Y+ECSA EG+ E+FE A +A L Sbjct: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYIADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRQDEHTRRELAKMKQEPVRSEEGRDMANRISAFGYLECSAKTKEGVREVFEMATRAGL 179
BLAST of rho-related gtp-binding isoform x1 vs. SwissProt
Match: gi|13878933|sp|P34146.2|RAC1C_DICDI (RecName: Full=Rho-related protein rac1C; Flags: Precursor) HSP 1 Score: 168.318 bits (425), Expect = 8.360e-52 Identity = 81/179 (45.25%), Postives = 115/179 (64.25%), Query Frame = 0 Query: 17 LDPVKIVIVGEGGAGKTSVLMGYKNKKISLEWIPTVFDNYIIKVPVNDQEIRVNLWDTAGQEAYDKLRTVTYDGAKLFLLCFDIASPYSLEQIPKKWAPEVRGFT-KAPIFLVGNKKDLREDEEIITKLQEQNLSPVTYNEGMKVAKQIGAQQYMECSALKLEGLDELFEKAAKAALPP 194 + +K V+VG+G GKT +L+ Y E+IPTVFDNY V V+ + I + LWDTAGQE YD+LR ++Y +FL+CF I SP S E + KW PEV PI LVG K D+RED+E +L+E+ L PV+Y +G+ K+I A +Y+ECSAL +GL +F++A ++ + P Sbjct: 1 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSIISPSSYENVSGKWGPEVFHHAPNVPIILVGTKMDMREDKETQDRLKEKKLYPVSYEQGLLKMKEINAFKYLECSALTQKGLKTVFDEAIRSVINP 179
BLAST of rho-related gtp-binding isoform x1 vs. nr
Match: gi|1160127666|ref|XP_020389270.1| (rho-related GTP-binding protein RhoG [Rhincodon typus]) HSP 1 Score: 194.512 bits (493), Expect = 9.236e-60 Identity = 91/191 (47.64%), Postives = 130/191 (68.06%), Query Frame = 0 Query: 17 LDPVKIVIVGEGGAGKTSVLMGYKNKKISLEWIPTVFDNYIIKVPVNDQEIRVNLWDTAGQEAYDKLRTVTYDGAKLFLLCFDIASPYSLEQIPKKWAPEVRGFT-KAPIFLVGNKKDLREDEEIITKLQEQNLSPVTYNEGMKVAKQIGAQQYMECSALKLEGLDELFEKAAKAALPPS--RPARFCALI 204 + +K V+VG+G GKT +L+ Y E+IPTVFDNY ++ V+++ + +NLWDTAGQE YD+LRT++Y +F++CF IASP S E + KW PEV P+ LVG KKDLR D E I KL+EQ+LSP+++++G +AKQI A +YMECSAL EG+ E+F +A +A + P+ + R C L+ Sbjct: 1 MQSIKCVVVGDGAVGKTCLLICYTTNAFPKEYIPTVFDNYSAQITVDNRTVSLNLWDTAGQEEYDRLRTLSYPQTDVFIICFSIASPPSYENVRHKWHPEVTHHCPDVPMLLVGTKKDLRNDPETIKKLKEQSLSPISHHQGNGLAKQIQAVKYMECSALNQEGIKEVFAEAVRAVINPAPVKSKRSCVLL 191
BLAST of rho-related gtp-binding isoform x1 vs. nr
Match: gi|557003447|ref|XP_006003822.1| (PREDICTED: rho-related GTP-binding protein RhoG-like [Latimeria chalumnae] >gi|557003450|ref|XP_006003823.1| PREDICTED: rho-related GTP-binding protein RhoG-like [Latimeria chalumnae]) HSP 1 Score: 193.741 bits (491), Expect = 1.836e-59 Identity = 90/191 (47.12%), Postives = 127/191 (66.49%), Query Frame = 0 Query: 17 LDPVKIVIVGEGGAGKTSVLMGYKNKKISLEWIPTVFDNYIIKVPVNDQEIRVNLWDTAGQEAYDKLRTVTYDGAKLFLLCFDIASPYSLEQIPKKWAPEVRGFT-KAPIFLVGNKKDLREDEEIITKLQEQNLSPVTYNEGMKVAKQIGAQQYMECSALKLEGLDELFEKAAKAALPP--SRPARFCALI 204 + +K V+VG+G GKT +L+ Y E+IPTVFDNY ++ V+ + + +NLWDTAGQE YD+LRT++Y +F++CF I SP S + KW PEV PI LVG KKDLR D+E I KL+EQ+LSP T+ +G+ ++KQIGA +Y+ECSAL EG+ E+F +A +A L P + + C L+ Sbjct: 1 MQTIKCVVVGDGAVGKTCLLISYTTNAFPEEYIPTVFDNYSAQMTVDSRTVSLNLWDTAGQEEYDRLRTLSYPQTNVFIICFSIGSPSSYANVRHKWHPEVSHHCPNIPILLVGTKKDLRSDQETIKKLKEQSLSPTTHQQGVSLSKQIGAVKYLECSALNQEGIREVFAEAVRAVLYPVTKKNTKKCVLL 191
BLAST of rho-related gtp-binding isoform x1 vs. nr
Match: gi|929114486|ref|XP_014068655.1| (PREDICTED: rho-related GTP-binding protein RhoG-like [Salmo salar] >gi|929114488|ref|XP_014068656.1| PREDICTED: rho-related GTP-binding protein RhoG-like [Salmo salar]) HSP 1 Score: 191.045 bits (484), Expect = 2.358e-58 Identity = 91/191 (47.64%), Postives = 125/191 (65.45%), Query Frame = 0 Query: 17 LDPVKIVIVGEGGAGKTSVLMGYKNKKISLEWIPTVFDNYIIKVPVNDQEIRVNLWDTAGQEAYDKLRTVTYDGAKLFLLCFDIASPYSLEQIPKKWAPEVRGFT-KAPIFLVGNKKDLREDEEIITKLQEQNLSPVTYNEGMKVAKQIGAQQYMECSALKLEGLDELFEKAAKAALPP--SRPARFCALI 204 + +K V+VG+G GKT +L+ Y E+IPTVFDNY ++ V+ + + +NLWDTAGQE YD+LRT++Y + +F++CF I SP S + KW PEV PI LVG K+DLR D E + KL+EQ L+P T +G +AKQIGA +YMECSAL EG+ E+F +A +A L P + AR C L+ Sbjct: 1 MQTMKCVVVGDGAVGKTCLLISYTTNAFPEEYIPTVFDNYSAQMTVDGRSVSLNLWDTAGQEEYDRLRTLSYPQSNVFVICFSIGSPSSHANVRHKWHPEVSHHCPSVPILLVGTKRDLRNDGETVKKLKEQGLAPTTQQQGNSMAKQIGAVKYMECSALTQEGVREVFTEAVRAVLYPVTKKNARKCVLL 191
BLAST of rho-related gtp-binding isoform x1 vs. nr
Match: gi|432878826|ref|XP_004073404.1| (rho-related GTP-binding protein RhoG [Oryzias latipes] >gi|432878828|ref|XP_004073405.1| rho-related GTP-binding protein RhoG [Oryzias latipes]) HSP 1 Score: 191.045 bits (484), Expect = 2.573e-58 Identity = 87/180 (48.33%), Postives = 123/180 (68.33%), Query Frame = 0 Query: 17 LDPVKIVIVGEGGAGKTSVLMGYKNKKISLEWIPTVFDNYIIKVPVNDQEIRVNLWDTAGQEAYDKLRTVTYDGAKLFLLCFDIASPYSLEQIPKKWAPEV-RGFTKAPIFLVGNKKDLREDEEIITKLQEQNLSPVTYNEGMKVAKQIGAQQYMECSALKLEGLDELFEKAAKAALPPS 195 + +K V+VG+G GKT +L+ Y E+IPTVFDNY ++ V+ + + +NLWDTAGQE YD+LRT++Y +F++CF I+SP S + KW PEV PI LVG KKDLR D E + KL+EQ+L+P T+ +G +AKQIGA +YMECSAL+ +G+ E+F +A +A L P+ Sbjct: 1 MQTIKCVVVGDGAVGKTCLLISYTTNAFPEEYIPTVFDNYSAQMSVDGRTVSLNLWDTAGQEEYDRLRTLSYPQTNVFIICFSISSPSSHANVRHKWHPEVCHHCPNVPILLVGTKKDLRSDTETVKKLKEQSLAPTTHQQGNALAKQIGAVKYMECSALQQDGVREVFAEAVRAVLYPA 180
BLAST of rho-related gtp-binding isoform x1 vs. nr
Match: gi|704170642|ref|XP_010131653.1| (PREDICTED: rho-related GTP-binding protein RhoG-like [Buceros rhinoceros silvestris] >gi|676700850|gb|KFO83357.1| Rho-related GTP-binding protein RhoG [Buceros rhinoceros silvestris]) HSP 1 Score: 190.66 bits (483), Expect = 3.455e-58 Identity = 90/191 (47.12%), Postives = 124/191 (64.92%), Query Frame = 0 Query: 17 LDPVKIVIVGEGGAGKTSVLMGYKNKKISLEWIPTVFDNYIIKVPVNDQEIRVNLWDTAGQEAYDKLRTVTYDGAKLFLLCFDIASPYSLEQIPKKWAPEVRGFT-KAPIFLVGNKKDLREDEEIITKLQEQNLSPVTYNEGMKVAKQIGAQQYMECSALKLEGLDELFEKAAKAALPP--SRPARFCALI 204 + +K V+VG+G GKT +L+ Y E+IPTVFDNY ++ V+ + + +NLWDTAGQE YD+LRT++Y +F++CF I SP S + KW PEV PI LVG K+DLR D E + KL+EQ+L+P T +G +AKQIGA +Y+ECSAL EG+ E+F +A +A L P R R C L+ Sbjct: 1 MQTIKCVVVGDGAVGKTCLLISYTTNAFPEEYIPTVFDNYSAQMTVDGRTVSLNLWDTAGQEEYDRLRTLSYPQTNVFVICFSIGSPSSYANVRHKWHPEVSHHCPNVPILLVGTKRDLRNDLETVKKLKEQSLAPTTLQQGTSLAKQIGAVKYLECSALNQEGVREVFAEAVRAVLYPVTKRNTRKCVLL 191
BLAST of rho-related gtp-binding isoform x1 vs. nr
Match: gi|929081519|ref|XP_014051207.1| (PREDICTED: rho-related GTP-binding protein RhoG-like [Salmo salar]) HSP 1 Score: 190.66 bits (483), Expect = 3.729e-58 Identity = 90/191 (47.12%), Postives = 125/191 (65.45%), Query Frame = 0 Query: 17 LDPVKIVIVGEGGAGKTSVLMGYKNKKISLEWIPTVFDNYIIKVPVNDQEIRVNLWDTAGQEAYDKLRTVTYDGAKLFLLCFDIASPYSLEQIPKKWAPEVRGFTKA-PIFLVGNKKDLREDEEIITKLQEQNLSPVTYNEGMKVAKQIGAQQYMECSALKLEGLDELFEKAAKAALPPSRPA--RFCALI 204 + +K V+VG+G GKT +L+ Y E+IPTVFDNY +V V+ + I +NLWDTAGQE YD+LRT++Y +F++CF I+SP S E + KW PEV P+ LVG K DLR DEE KL+EQ+ SPVT+++G +A+QI A +Y+ECSAL +G+ E+F +A +A L P R C L+ Sbjct: 1 MQSIKCVVVGDGAVGKTCLLISYTTGAFPKEYIPTVFDNYSSQVTVDGRSISLNLWDTAGQEEYDRLRTLSYPQTNIFIICFSISSPASYENVKHKWHPEVTHHCPGVPVLLVGTKSDLRNDEETQRKLKEQSQSPVTHHQGAGLARQIQAARYLECSALNQDGIKEVFAEAVRAFLNPQHTTSKRSCRLL 191
BLAST of rho-related gtp-binding isoform x1 vs. nr
Match: gi|1069385065|ref|XP_018087625.1| (PREDICTED: ras homolog gene family, member G (rho G) S homeolog isoform X1 [Xenopus laevis] >gi|1069385067|ref|XP_018087626.1| PREDICTED: ras homolog gene family, member G (rho G) S homeolog isoform X1 [Xenopus laevis] >gi|1069385069|ref|XP_018087627.1| PREDICTED: ras homolog gene family, member G (rho G) S homeolog isoform X1 [Xenopus laevis] >gi|1069385071|ref|XP_018087628.1| PREDICTED: ras homolog gene family, member G (rho G) S homeolog isoform X1 [Xenopus laevis] >gi|1069385073|ref|XP_018087629.1| PREDICTED: ras homolog gene family, member G (rho G) S homeolog isoform X1 [Xenopus laevis] >gi|1050363538|gb|OCT65742.1| hypothetical protein XELAEV_18041985mg [Xenopus laevis]) HSP 1 Score: 190.274 bits (482), Expect = 4.537e-58 Identity = 86/179 (48.04%), Postives = 120/179 (67.04%), Query Frame = 0 Query: 17 LDPVKIVIVGEGGAGKTSVLMGYKNKKISLEWIPTVFDNYIIKVPVNDQEIRVNLWDTAGQEAYDKLRTVTYDGAKLFLLCFDIASPYSLEQIPKKWAPEVRGFT-KAPIFLVGNKKDLREDEEIITKLQEQNLSPVTYNEGMKVAKQIGAQQYMECSALKLEGLDELFEKAAKAALPP 194 + +K V+VG+G GKT +L+ Y E+IPTVFDNY ++ V+ + + +NLWDTAGQE YD+LRT++Y +F++CF I SP S + KW PEV PI LVG K+DLR D E I KL+EQ+L+P T+ +G +AKQIGA +YMECSAL +G+ ++FE+A +A P Sbjct: 1 MQTIKCVVVGDGAVGKTCLLISYTTNAFPEEYIPTVFDNYSAQMTVDGRTVSLNLWDTAGQEEYDRLRTLSYPQTNVFIICFSIGSPSSHANVRHKWHPEVSHHCPNVPILLVGTKQDLRNDTETIKKLKEQSLAPTTHQQGSSLAKQIGAVRYMECSALHQQGIRQVFEEAVRAVFYP 179
BLAST of rho-related gtp-binding isoform x1 vs. nr
Match: gi|831473914|ref|XP_012715295.1| (rho-related GTP-binding protein RhoG-like [Fundulus heteroclitus] >gi|831473917|ref|XP_012715351.1| rho-related GTP-binding protein RhoG-like [Fundulus heteroclitus]) HSP 1 Score: 190.274 bits (482), Expect = 4.688e-58 Identity = 88/179 (49.16%), Postives = 121/179 (67.60%), Query Frame = 0 Query: 17 LDPVKIVIVGEGGAGKTSVLMGYKNKKISLEWIPTVFDNYIIKVPVNDQEIRVNLWDTAGQEAYDKLRTVTYDGAKLFLLCFDIASPYSLEQIPKKWAPEVRGFT-KAPIFLVGNKKDLREDEEIITKLQEQNLSPVTYNEGMKVAKQIGAQQYMECSALKLEGLDELFEKAAKAALPP 194 + +K V+VG+G GKT +L+ Y E+IPTVFDNY ++ V+ + + +NLWDTAGQE YD+LRT++Y +F++CF I SP S + KW PEV PI LVG KKDLR DEE + KL+EQ+L+P T+ +G +AKQIGA +YMECSALK + + E+F +A +A L P Sbjct: 1 MQTIKCVVVGDGAVGKTCLLISYTTNAFPEEYIPTVFDNYSAQMSVDGRTVSLNLWDTAGQEEYDRLRTLSYPQTNVFIICFSIGSPSSHANVRHKWHPEVSHHCPNVPILLVGTKKDLRGDEETVKKLKEQSLAPTTHQQGNALAKQIGAVKYMECSALKQDNVREVFAEAVRAVLYP 179
BLAST of rho-related gtp-binding isoform x1 vs. nr
Match: gi|1367497633|ref|XP_024232544.1| (rho-related GTP-binding protein RhoG-like [Oncorhynchus tshawytscha] >gi|1367497635|ref|XP_024232545.1| rho-related GTP-binding protein RhoG-like [Oncorhynchus tshawytscha]) HSP 1 Score: 190.274 bits (482), Expect = 4.897e-58 Identity = 89/191 (46.60%), Postives = 125/191 (65.45%), Query Frame = 0 Query: 17 LDPVKIVIVGEGGAGKTSVLMGYKNKKISLEWIPTVFDNYIIKVPVNDQEIRVNLWDTAGQEAYDKLRTVTYDGAKLFLLCFDIASPYSLEQIPKKWAPEVRGFTKA-PIFLVGNKKDLREDEEIITKLQEQNLSPVTYNEGMKVAKQIGAQQYMECSALKLEGLDELFEKAAKAALPPSRPA--RFCALI 204 + +K V+VG+G GKT +L+ Y E+IPTVFDNY +V ++ + I +NLWDTAGQE YD+LRT++Y +F++CF I+SP S E + KW PEV P+ LVG K DLR DEE KL+EQ+ SPVT+++G +A+QI A +Y+ECSAL +G+ E+F +A +A L P R C L+ Sbjct: 1 MQSIKCVVVGDGAVGKTCLLISYTTGAFPKEYIPTVFDNYSSQVTIDGRSISLNLWDTAGQEEYDRLRTLSYPQTNIFIICFSISSPASYENVKHKWHPEVSHHCPGVPVLLVGTKSDLRNDEETQRKLKEQSQSPVTHHQGAGLARQIQAARYLECSALNQDGIKEVFAEAVRAFLNPQHTTSKRSCRLL 191
BLAST of rho-related gtp-binding isoform x1 vs. nr
Match: gi|1049277051|ref|XP_017579019.1| (PREDICTED: rho-related GTP-binding protein RhoG-like [Pygocentrus nattereri]) HSP 1 Score: 190.274 bits (482), Expect = 5.831e-58 Identity = 89/191 (46.60%), Postives = 125/191 (65.45%), Query Frame = 0 Query: 17 LDPVKIVIVGEGGAGKTSVLMGYKNKKISLEWIPTVFDNYIIKVPVNDQEIRVNLWDTAGQEAYDKLRTVTYDGAKLFLLCFDIASPYSLEQIPKKWAPEVRGFT-KAPIFLVGNKKDLREDEEIITKLQEQNLSPVTYNEGMKVAKQIGAQQYMECSALKLEGLDELFEKAAKAALPP--SRPARFCALI 204 + +K V+VG+G GKT +L+ Y E+IPTVFDNY ++ V+ + + +NLWDTAGQE YD+LRT++Y +F++CF I SP S + KW PEV PI LVG KKDLR D E + KL+EQNL+P T+ +G +AKQI A +Y+ECSAL EG+ E+F +A +A L P + ++ C L+ Sbjct: 1 MQTIKCVVVGDGAVGKTCLLISYTTNAFPEEYIPTVFDNYSAQMSVDGRTVSLNLWDTAGQEEYDRLRTLSYPQTNVFIICFSIGSPSSYANVRHKWHPEVSHHCPSVPILLVGTKKDLRSDSETVKKLKEQNLAPTTHQQGSALAKQINAVKYLECSALLQEGVREVFAEAVRAVLYPVTKKNSKKCVLL 191 The following BLAST results are available for this feature:
BLAST of rho-related gtp-binding isoform x1 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 25
Pagesback to top
BLAST of rho-related gtp-binding isoform x1 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
Pagesback to top
BLAST of rho-related gtp-binding isoform x1 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold79_size400133:200656..201681+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold79_size400133-snap-gene-2.14 ID=maker-scaffold79_size400133-snap-gene-2.14|Name=rho-related gtp-binding isoform x1|organism=Tigriopus kingsejongensis|type=gene|length=1026bp|location=Sequence derived from alignment at scaffold79_size400133:200656..201681+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'rho-related gtp-binding isoform x1' has the following synonyms
Add to Basket
|