rho-related gtp-binding isoform x1, maker-scaffold79_size400133-snap-gene-2.14 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of rho-related gtp-binding isoform x1 vs. L. salmonis genes
Match: EMLSAG00000001769 (supercontig:LSalAtl2s:LSalAtl2s12:81506:89483:-1 gene:EMLSAG00000001769 transcript:EMLSAT00000001769 description:"maker-LSalAtl2s12-augustus-gene-0.10") HSP 1 Score: 65.855 bits (159), Expect = 4.484e-13 Identity = 44/124 (35.48%), Postives = 64/124 (51.61%), Query Frame = 0 Query: 21 KIVIVGEGGAGKTSV----LMGYKNKK----ISLEWIPTVFDNYIIKVPVNDQEIRVNLWDTAGQEAYDKLRTVTYDGAKLFLLCFDIASPYSLEQIPKKWAPEVRGFTKAPIFLVGNKKDLRE 136 K+V+VG+GG GKT+ L G KK + +E P VF + + P IR N+WDTAGQE + LR Y + ++ FD+ S + + +P VR PI L GNK D+++ Sbjct: 26 KLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVF--HTSRGP-----IRFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLTGNKVDIKD 142
BLAST of rho-related gtp-binding isoform x1 vs. L. salmonis genes
Match: EMLSAG00000005149 (supercontig:LSalAtl2s:LSalAtl2s272:1903:7665:1 gene:EMLSAG00000005149 transcript:EMLSAT00000005149 description:"snap_masked-LSalAtl2s272-processed-gene-0.5") HSP 1 Score: 63.929 bits (154), Expect = 5.704e-13 Identity = 50/169 (29.59%), Postives = 76/169 (44.97%), Query Frame = 0 Query: 21 KIVIVGEGGAGKTSVLMGYK-NKKISLEWIPTVFDNYIIKVPVNDQEIRVNLWDTAGQEAYDKLRTVTYDGAKLFLLCFDIASPYSLEQIPKKWAPEVRGFTKAP--IFLVGNKKDLREDEEIITKLQEQNLSPVTYNEGMKVAKQIGAQQYMECSALKLEGLDELFEK 186 K+V++G+ G GK +L Y +KI V+ + ++ +WDTAGQE Y + + Y GA LL +DIA + E + +W E+R + I LVGNK DLR +L V +E A+Q ++E SAL ++ F Sbjct: 13 KVVLIGDSGVGKMILLCTYTVGEKI-----------------VDGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVD-RWLRELRDHADSNIVIMLVGNKCDLR------------HLRAVPTDEAKHFAEQ-NNLSFIETSALDSTNVETAFHN 150
BLAST of rho-related gtp-binding isoform x1 vs. L. salmonis genes
Match: EMLSAG00000001458 (supercontig:LSalAtl2s:LSalAtl2s1248:131241:136261:1 gene:EMLSAG00000001458 transcript:EMLSAT00000001458 description:"maker-LSalAtl2s1248-augustus-gene-0.13") HSP 1 Score: 62.7734 bits (151), Expect = 1.345e-12 Identity = 32/117 (27.35%), Postives = 67/117 (57.26%), Query Frame = 0 Query: 21 KIVIVGEGGAGKTSVLMGYKNKKISLEWIPTVFDNYIIK-VPVNDQEIRVNLWDTAGQEAYDKLRTVTYDGAKLFLLCFDIASPYSLEQIPKKWAPEVRGFTKAPI--FLVGNKKDL 134 K++++G+ G GK+ +L+ + + + +I T+ ++ I+ + ++ + I++ +WDTAGQE + + + Y GA ++ +D+ S + K+W E+ + + LVGNK DL Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNL-KQWLQEIDRYACENVNKLLVGNKCDL 125
BLAST of rho-related gtp-binding isoform x1 vs. L. salmonis genes
Match: EMLSAG00000002040 (supercontig:LSalAtl2s:LSalAtl2s136:216604:221557:1 gene:EMLSAG00000002040 transcript:EMLSAT00000002040 description:"maker-LSalAtl2s136-augustus-gene-2.7") HSP 1 Score: 62.3882 bits (150), Expect = 2.265e-12 Identity = 51/180 (28.33%), Postives = 86/180 (47.78%), Query Frame = 0 Query: 17 LDPVKIVIVGEGGAGKTSVLMGYKNKKISLEWIPTVFDNYIIK-VPVNDQEIRVNLWDTAGQEAYDKLRTVTYDGAKLFLLCFDIASPYSLEQIPKKWAPEVRG--FTKAPIFLVGNKKDLREDEEIITKLQEQNLSPVTYNEGMKVAKQIGAQQYMECSALKLEGLDELFEKAAKAALP 193 L K+V +GE GKTS++ + + T+ +++ K + + D+ +R+ LWDTAGQE + L + + ++ +D + S Q KW +VR + I LVGNK DL E ++ T+ +G + AK++ ++E SA + LF + A A LP Sbjct: 11 LRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDTTNANSFHQTS-KWIDDVRTERGSDVIIMLVGNKTDLSEKRQVPTE------------DGERKAKELNV-MFIETSAKAGYNVKLLFRRVA-AXLP 175
BLAST of rho-related gtp-binding isoform x1 vs. L. salmonis genes
Match: EMLSAG00000006269 (supercontig:LSalAtl2s:LSalAtl2s341:639253:658960:-1 gene:EMLSAG00000006269 transcript:EMLSAT00000006269 description:"maker-LSalAtl2s341-augustus-gene-6.12") HSP 1 Score: 62.003 bits (149), Expect = 4.036e-12 Identity = 38/122 (31.15%), Postives = 60/122 (49.18%), Query Frame = 0 Query: 20 VKIVIVGEGGAGKTSVLMGYKNKKISLEWIPTVFDNYIIK-VPVNDQEIRVNLWDTAGQEAYDKLRTVTYDGAKLFLLCFDIASPYSLEQIPKKWAPEVRGFTKAPIFLVGNKKDLREDEEI 140 +K+VIVG G GK+S++ Y + + T+ +++ K + +N +R+ LWDTAGQE +D + Y GA+ ++ F SL + K P LV NK DL + I Sbjct: 17 IKVVIVGNGAVGKSSMIQRYCKGLYTQNYKKTIGVDFLEKQLRINGDNVRLMLWDTAGQEEFDAITKSYYRGAQACVIVFSTTDKASLSSVKKWKKKIEEECGYIPTVLVQNKIDLLHEARI 138
BLAST of rho-related gtp-binding isoform x1 vs. SwissProt
Match: gi|51701705|sp|Q6RUV5.1|RAC1_RAT (RecName: Full=Ras-related C3 botulinum toxin substrate 1; AltName: Full=p21-Rac1; Flags: Precursor >gi|51702785|sp|P62998.1|RAC1_BOVIN RecName: Full=Ras-related C3 botulinum toxin substrate 1; AltName: Full=p21-Rac1; Flags: Precursor >gi|51702786|sp|P62999.1|RAC1_CANFA RecName: Full=Ras-related C3 botulinum toxin substrate 1; AltName: Full=Rac2; AltName: Full=p21-Rac1; Flags: Precursor >gi|51702787|sp|P63000.1|RAC1_HUMAN RecName: Full=Ras-related C3 botulinum toxin substrate 1; AltName: Full=Cell migration-inducing gene 5 protein; AltName: Full=Ras-like protein TC25; AltName: Full=p21-Rac1; Flags: Precursor >gi|51702788|sp|P63001.1|RAC1_MOUSE RecName: Full=Ras-related C3 botulinum toxin substrate 1; AltName: Full=p21-Rac1; Flags: Precursor) HSP 1 Score: 181.415 bits (459), Expect = 4.664e-57 Identity = 85/176 (48.30%), Postives = 119/176 (67.61%), Query Frame = 0 Query: 20 VKIVIVGEGGAGKTSVLMGYKNKKISLEWIPTVFDNYIIKVPVNDQEIRVNLWDTAGQEAYDKLRTVTYDGAKLFLLCFDIASPYSLEQIPKKWAPEVRGFT-KAPIFLVGNKKDLREDEEIITKLQEQNLSPVTYNEGMKVAKQIGAQQYMECSALKLEGLDELFEKAAKAALPP 194 +K V+VG+G GKT +L+ Y E+IPTVFDNY V V+ + + + LWDTAGQE YD+LR ++Y +FL+CF + SP S E + KW PEVR PI LVG K DLR+D++ I KL+E+ L+P+TY +G+ +AK+IGA +Y+ECSAL GL +F++A +A L P Sbjct: 4 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVLCP 179
BLAST of rho-related gtp-binding isoform x1 vs. SwissProt
Match: gi|1346949|sp|P40792.2|RAC1_DROME (RecName: Full=Ras-related protein Rac1; Flags: Precursor) HSP 1 Score: 180.259 bits (456), Expect = 1.402e-56 Identity = 87/189 (46.03%), Postives = 125/189 (66.14%), Query Frame = 0 Query: 20 VKIVIVGEGGAGKTSVLMGYKNKKISLEWIPTVFDNYIIKVPVNDQEIRVNLWDTAGQEAYDKLRTVTYDGAKLFLLCFDIASPYSLEQIPKKWAPEVRGFT-KAPIFLVGNKKDLREDEEIITKLQEQNLSPVTYNEGMKVAKQIGAQQYMECSALKLEGLDELFEKAAKAALPP---SRPARFCALI 204 +K V+VG+G GKT +L+ Y E+IPTVFDNY V V+ + I + LWDTAGQE YD+LR ++Y +FL+CF + +P S E + KW PEVR PI LVG K DLR+D+ I KL+++ L+P+TY +G+ +AK+IGA +Y+ECSAL +GL +F++A ++ L P + R CAL+ Sbjct: 4 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDAKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVNPASFENVRAKWYPEVRHHCPSTPIILVGTKLDLRDDKNTIEKLRDKKLAPITYPQGLAMAKEIGAVKYLECSALTQKGLKTVFDEAIRSVLCPVLQPKSKRKCALL 192
BLAST of rho-related gtp-binding isoform x1 vs. SwissProt
Match: gi|51338611|sp|P84095.1|RHOG_HUMAN (RecName: Full=Rho-related GTP-binding protein RhoG; Flags: Precursor >gi|51338612|sp|P84096.1|RHOG_MOUSE RecName: Full=Rho-related GTP-binding protein RhoG; AltName: Full=Sid 10750; Flags: Precursor >gi|51338613|sp|P84097.1|RHOG_CRICR RecName: Full=Rho-related GTP-binding protein RhoG; Flags: Precursor) HSP 1 Score: 179.489 bits (454), Expect = 2.395e-56 Identity = 86/191 (45.03%), Postives = 124/191 (64.92%), Query Frame = 0 Query: 17 LDPVKIVIVGEGGAGKTSVLMGYKNKKISLEWIPTVFDNYIIKVPVNDQEIRVNLWDTAGQEAYDKLRTVTYDGAKLFLLCFDIASPYSLEQIPKKWAPEV-RGFTKAPIFLVGNKKDLREDEEIITKLQEQNLSPVTYNEGMKVAKQIGAQQYMECSALKLEGLDELFEKAAKAALPPS--RPARFCALI 204 + +K V+VG+G GKT +L+ Y E+IPTVFDNY + V+ + + +NLWDTAGQE YD+LRT++Y +F++CF IASP S E + KW PEV PI LVG KKDLR + + +L+EQ +P+T +G +AKQI A +Y+ECSAL+ +G+ E+F +A +A L P+ + R C L+ Sbjct: 1 MQSIKCVVVGDGAVGKTCLLICYTTNAFPKEYIPTVFDNYSAQSAVDGRTVNLNLWDTAGQEEYDRLRTLSYPQTNVFVICFSIASPPSYENVRHKWHPEVCHHCPDVPILLVGTKKDLRAQPDTLRRLKEQGQAPITPQQGQALAKQIHAVRYLECSALQQDGVKEVFAEAVRAVLNPTPIKRGRSCILL 191
BLAST of rho-related gtp-binding isoform x1 vs. SwissProt
Match: gi|13633612|sp|Q9TU25.1|RAC2_BOVIN (RecName: Full=Ras-related C3 botulinum toxin substrate 2; AltName: Full=p21-Rac2; Flags: Precursor) HSP 1 Score: 179.489 bits (454), Expect = 2.498e-56 Identity = 87/189 (46.03%), Postives = 127/189 (67.20%), Query Frame = 0 Query: 20 VKIVIVGEGGAGKTSVLMGYKNKKISLEWIPTVFDNYIIKVPVNDQEIRVNLWDTAGQEAYDKLRTVTYDGAKLFLLCFDIASPYSLEQIPKKWAPEVRGFTKA-PIFLVGNKKDLREDEEIITKLQEQNLSPVTYNEGMKVAKQIGAQQYMECSALKLEGLDELFEKAAKAAL--PPSRPA-RFCALI 204 +K V+VG+G GKT +L+ Y E+IPTVFDNY V V+ + + + LWDTAGQE YD+LR ++Y +FL+CF + SP S E + KW PEVR + PI LVG K DLR+D++ I KL+E+ L+P+TY +G+ +AK+I + +Y+ECSAL GL +F++A +A L P+RP R C+++ Sbjct: 4 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDSKPVNLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVSPASYENVRAKWFPEVRHHCPSTPIILVGTKLDLRDDKDTIEKLKEKKLAPITYPQGLALAKEIDSVKYLECSALTQRGLKTVFDEAIRAVLCPQPTRPQKRPCSIL 192
BLAST of rho-related gtp-binding isoform x1 vs. SwissProt
Match: gi|131806|sp|P15153.1|RAC2_HUMAN (RecName: Full=Ras-related C3 botulinum toxin substrate 2; AltName: Full=GX; AltName: Full=Small G protein; AltName: Full=p21-Rac2; Flags: Precursor) HSP 1 Score: 179.104 bits (453), Expect = 3.697e-56 Identity = 86/189 (45.50%), Postives = 124/189 (65.61%), Query Frame = 0 Query: 20 VKIVIVGEGGAGKTSVLMGYKNKKISLEWIPTVFDNYIIKVPVNDQEIRVNLWDTAGQEAYDKLRTVTYDGAKLFLLCFDIASPYSLEQIPKKWAPEVRGFT-KAPIFLVGNKKDLREDEEIITKLQEQNLSPVTYNEGMKVAKQIGAQQYMECSALKLEGLDELFEKAAKAAL---PPSRPARFCALI 204 +K V+VG+G GKT +L+ Y E+IPTVFDNY V V+ + + + LWDTAGQE YD+LR ++Y +FL+CF + SP S E + KW PEVR PI LVG K DLR+D++ I KL+E+ L+P+TY +G+ +AK+I + +Y+ECSAL GL +F++A +A L P + R C+L+ Sbjct: 4 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDSKPVNLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVSPASYENVRAKWFPEVRHHCPSTPIILVGTKLDLRDDKDTIEKLKEKKLAPITYPQGLALAKEIDSVKYLECSALTQRGLKTVFDEAIRAVLCPQPTRQQKRACSLL 192
BLAST of rho-related gtp-binding isoform x1 vs. SwissProt
Match: gi|13633384|sp|O88931.2|RAC2_CAVPO (RecName: Full=Ras-related C3 botulinum toxin substrate 2; AltName: Full=p21-Rac2; Flags: Precursor) HSP 1 Score: 178.333 bits (451), Expect = 7.344e-56 Identity = 86/189 (45.50%), Postives = 126/189 (66.67%), Query Frame = 0 Query: 20 VKIVIVGEGGAGKTSVLMGYKNKKISLEWIPTVFDNYIIKVPVNDQEIRVNLWDTAGQEAYDKLRTVTYDGAKLFLLCFDIASPYSLEQIPKKWAPEVRGFTKA-PIFLVGNKKDLREDEEIITKLQEQNLSPVTYNEGMKVAKQIGAQQYMECSALKLEGLDELFEKAAKAAL--PPSRPA-RFCALI 204 +K V+VG+G GKT +L+ Y E+IPTVFDNY V V+ + + + LWDTAGQE YD+LR ++Y +FL+CF + SP S E + W P+VR + PI L+G K DLR+D+E I KL+E+ L+P+TY +G+ +AK+I + +Y+ECSAL GL +F++A +A L P+RP R C+L+ Sbjct: 4 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDSKPVNLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVSPASYENVHANWYPKVRHHCPSTPIILLGTKLDLRDDKETIEKLKEKKLAPITYPQGLALAKEIDSVKYLECSALTQRGLKTVFDEAIRAVLCPQPTRPQKRACSLL 192
BLAST of rho-related gtp-binding isoform x1 vs. SwissProt
Match: gi|464534|sp|Q05144.1|RAC2_MOUSE (RecName: Full=Ras-related C3 botulinum toxin substrate 2; AltName: Full=Protein EN-7; AltName: Full=p21-Rac2; Flags: Precursor) HSP 1 Score: 177.948 bits (450), Expect = 1.381e-55 Identity = 86/189 (45.50%), Postives = 124/189 (65.61%), Query Frame = 0 Query: 20 VKIVIVGEGGAGKTSVLMGYKNKKISLEWIPTVFDNYIIKVPVNDQEIRVNLWDTAGQEAYDKLRTVTYDGAKLFLLCFDIASPYSLEQIPKKWAPEVRGFTKA-PIFLVGNKKDLREDEEIITKLQEQNLSPVTYNEGMKVAKQIGAQQYMECSALKLEGLDELFEKAAKAAL---PPSRPARFCALI 204 +K V+VG+G GKT +L+ Y E+IPTVFDNY V V+ + + + LWDTAGQE YD+LR ++Y +FL+CF + SP S E + KW PEVR + PI LVG K DLR+D++ I KL+E+ L+P+TY +G+ +AK I + +Y+ECSAL GL +F++A +A L P + R C+L+ Sbjct: 4 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDSKPVNLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVSPASYENVRAKWFPEVRHHCPSTPIILVGTKLDLRDDKDTIEKLKEKKLAPITYPQGLALAKDIDSVKYLECSALTQRGLKTVFDEAIRAVLCPQPTRQQKRPCSLL 192
BLAST of rho-related gtp-binding isoform x1 vs. SwissProt
Match: gi|1346950|sp|P48554.1|RAC2_DROME (RecName: Full=Ras-related protein Rac2; Flags: Precursor) HSP 1 Score: 177.563 bits (449), Expect = 1.609e-55 Identity = 87/192 (45.31%), Postives = 127/192 (66.15%), Query Frame = 0 Query: 17 LDPVKIVIVGEGGAGKTSVLMGYKNKKISLEWIPTVFDNYIIKVPVNDQEIRVNLWDTAGQEAYDKLRTVTYDGAKLFLLCFDIASPYSLEQIPKKWAPEVRGFTKA-PIFLVGNKKDLREDEEIITKLQEQNLSPVTYNEGMKVAKQIGAQQYMECSALKLEGLDELFEKAAKAALPP--SRPARF-CALI 204 + +K V+VG+G GKT +L+ Y E+IPTVFDNY V V+ + I + LWDTAGQE YD+LR ++Y +FL+CF + +P S E + KW PEVR + PI LVG K DLR+D++ I KL+++ L+P+TY +G+ +AK+I A +Y+ECSAL +GL +F++A ++ L P P R CAL+ Sbjct: 1 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDAKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVNPASFENVRAKWFPEVRHHCPSVPIILVGTKLDLRDDKQTIEKLKDKKLTPITYPQGLAMAKEIAAVKYLECSALTQKGLKTVFDEAIRSVLCPVVRGPKRHKCALL 192
BLAST of rho-related gtp-binding isoform x1 vs. SwissProt
Match: gi|46397673|sp|P60763.1|RAC3_HUMAN (RecName: Full=Ras-related C3 botulinum toxin substrate 3; AltName: Full=p21-Rac3; Flags: Precursor >gi|46397674|sp|P60764.1|RAC3_MOUSE RecName: Full=Ras-related C3 botulinum toxin substrate 3; AltName: Full=p21-Rac3; Flags: Precursor) HSP 1 Score: 176.792 bits (447), Expect = 2.804e-55 Identity = 80/177 (45.20%), Postives = 119/177 (67.23%), Query Frame = 0 Query: 17 LDPVKIVIVGEGGAGKTSVLMGYKNKKISLEWIPTVFDNYIIKVPVNDQEIRVNLWDTAGQEAYDKLRTVTYDGAKLFLLCFDIASPYSLEQIPKKWAPEVRGFT-KAPIFLVGNKKDLREDEEIITKLQEQNLSPVTYNEGMKVAKQIGAQQYMECSALKLEGLDELFEKAAKAAL 192 + +K V+VG+G GKT +L+ Y E+IPTVFDNY V V+ + + + LWDTAGQE YD+LR ++Y +FL+CF + SP S E + KW PEVR PI LVG K DLR+D++ I +L+++ L+P+TY +G+ +A++IG+ +Y+ECSAL GL +F++A +A L Sbjct: 1 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPHTPILLVGTKLDLRDDKDTIERLRDKKLAPITYPQGLAMAREIGSVKYLECSALTQRGLKTVFDEAIRAVL 177
BLAST of rho-related gtp-binding isoform x1 vs. SwissProt
Match: gi|2500183|sp|Q22038.1|RHO1_CAEEL (RecName: Full=Ras-like GTP-binding protein rhoA; Flags: Precursor) HSP 1 Score: 173.711 bits (439), Expect = 6.249e-54 Identity = 82/173 (47.40%), Postives = 117/173 (67.63%), Query Frame = 0 Query: 21 KIVIVGEGGAGKTSVLMGYKNKKISLEWIPTVFDNYIIKVPVNDQEIRVNLWDTAGQEAYDKLRTVTYDGAKLFLLCFDIASPYSLEQIPKKWAPEVRGFT-KAPIFLVGNKKDLREDEEIITKLQEQNLSPVTYNEGMKVAKQIGAQQYMECSALKLEGLDELFEKAAKAAL 192 K+VIVG+G GKT +L+ + + ++PTVF+NY+ + V+ +++ + LWDTAGQE YD+LR ++Y + L+CF I SP SLE IP+KW PEVR F PI LVGNK+DLR D + + +L + PV +G +A+QIGA Y+ECSA +G+ E+FEKA +AAL Sbjct: 7 KLVIVGDGACGKTCLLIVFSKDQFPDVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVRHFCPNVPIILVGNKRDLRSDPQTVRELAKMKQEPVKPEQGRAIAEQIGAFAYLECSAKTKDGIREVFEKATQAAL 179
BLAST of rho-related gtp-binding isoform x1 vs. nr
Match: gi|1160127666|ref|XP_020389270.1| (rho-related GTP-binding protein RhoG [Rhincodon typus]) HSP 1 Score: 194.512 bits (493), Expect = 9.236e-60 Identity = 91/191 (47.64%), Postives = 130/191 (68.06%), Query Frame = 0 Query: 17 LDPVKIVIVGEGGAGKTSVLMGYKNKKISLEWIPTVFDNYIIKVPVNDQEIRVNLWDTAGQEAYDKLRTVTYDGAKLFLLCFDIASPYSLEQIPKKWAPEVRGFT-KAPIFLVGNKKDLREDEEIITKLQEQNLSPVTYNEGMKVAKQIGAQQYMECSALKLEGLDELFEKAAKAALPPS--RPARFCALI 204 + +K V+VG+G GKT +L+ Y E+IPTVFDNY ++ V+++ + +NLWDTAGQE YD+LRT++Y +F++CF IASP S E + KW PEV P+ LVG KKDLR D E I KL+EQ+LSP+++++G +AKQI A +YMECSAL EG+ E+F +A +A + P+ + R C L+ Sbjct: 1 MQSIKCVVVGDGAVGKTCLLICYTTNAFPKEYIPTVFDNYSAQITVDNRTVSLNLWDTAGQEEYDRLRTLSYPQTDVFIICFSIASPPSYENVRHKWHPEVTHHCPDVPMLLVGTKKDLRNDPETIKKLKEQSLSPISHHQGNGLAKQIQAVKYMECSALNQEGIKEVFAEAVRAVINPAPVKSKRSCVLL 191
BLAST of rho-related gtp-binding isoform x1 vs. nr
Match: gi|557003447|ref|XP_006003822.1| (PREDICTED: rho-related GTP-binding protein RhoG-like [Latimeria chalumnae] >gi|557003450|ref|XP_006003823.1| PREDICTED: rho-related GTP-binding protein RhoG-like [Latimeria chalumnae]) HSP 1 Score: 193.741 bits (491), Expect = 1.836e-59 Identity = 90/191 (47.12%), Postives = 127/191 (66.49%), Query Frame = 0 Query: 17 LDPVKIVIVGEGGAGKTSVLMGYKNKKISLEWIPTVFDNYIIKVPVNDQEIRVNLWDTAGQEAYDKLRTVTYDGAKLFLLCFDIASPYSLEQIPKKWAPEVRGFT-KAPIFLVGNKKDLREDEEIITKLQEQNLSPVTYNEGMKVAKQIGAQQYMECSALKLEGLDELFEKAAKAALPP--SRPARFCALI 204 + +K V+VG+G GKT +L+ Y E+IPTVFDNY ++ V+ + + +NLWDTAGQE YD+LRT++Y +F++CF I SP S + KW PEV PI LVG KKDLR D+E I KL+EQ+LSP T+ +G+ ++KQIGA +Y+ECSAL EG+ E+F +A +A L P + + C L+ Sbjct: 1 MQTIKCVVVGDGAVGKTCLLISYTTNAFPEEYIPTVFDNYSAQMTVDSRTVSLNLWDTAGQEEYDRLRTLSYPQTNVFIICFSIGSPSSYANVRHKWHPEVSHHCPNIPILLVGTKKDLRSDQETIKKLKEQSLSPTTHQQGVSLSKQIGAVKYLECSALNQEGIREVFAEAVRAVLYPVTKKNTKKCVLL 191
BLAST of rho-related gtp-binding isoform x1 vs. nr
Match: gi|929114486|ref|XP_014068655.1| (PREDICTED: rho-related GTP-binding protein RhoG-like [Salmo salar] >gi|929114488|ref|XP_014068656.1| PREDICTED: rho-related GTP-binding protein RhoG-like [Salmo salar]) HSP 1 Score: 191.045 bits (484), Expect = 2.358e-58 Identity = 91/191 (47.64%), Postives = 125/191 (65.45%), Query Frame = 0 Query: 17 LDPVKIVIVGEGGAGKTSVLMGYKNKKISLEWIPTVFDNYIIKVPVNDQEIRVNLWDTAGQEAYDKLRTVTYDGAKLFLLCFDIASPYSLEQIPKKWAPEVRGFT-KAPIFLVGNKKDLREDEEIITKLQEQNLSPVTYNEGMKVAKQIGAQQYMECSALKLEGLDELFEKAAKAALPP--SRPARFCALI 204 + +K V+VG+G GKT +L+ Y E+IPTVFDNY ++ V+ + + +NLWDTAGQE YD+LRT++Y + +F++CF I SP S + KW PEV PI LVG K+DLR D E + KL+EQ L+P T +G +AKQIGA +YMECSAL EG+ E+F +A +A L P + AR C L+ Sbjct: 1 MQTMKCVVVGDGAVGKTCLLISYTTNAFPEEYIPTVFDNYSAQMTVDGRSVSLNLWDTAGQEEYDRLRTLSYPQSNVFVICFSIGSPSSHANVRHKWHPEVSHHCPSVPILLVGTKRDLRNDGETVKKLKEQGLAPTTQQQGNSMAKQIGAVKYMECSALTQEGVREVFTEAVRAVLYPVTKKNARKCVLL 191
BLAST of rho-related gtp-binding isoform x1 vs. nr
Match: gi|432878826|ref|XP_004073404.1| (rho-related GTP-binding protein RhoG [Oryzias latipes] >gi|432878828|ref|XP_004073405.1| rho-related GTP-binding protein RhoG [Oryzias latipes]) HSP 1 Score: 191.045 bits (484), Expect = 2.573e-58 Identity = 87/180 (48.33%), Postives = 123/180 (68.33%), Query Frame = 0 Query: 17 LDPVKIVIVGEGGAGKTSVLMGYKNKKISLEWIPTVFDNYIIKVPVNDQEIRVNLWDTAGQEAYDKLRTVTYDGAKLFLLCFDIASPYSLEQIPKKWAPEV-RGFTKAPIFLVGNKKDLREDEEIITKLQEQNLSPVTYNEGMKVAKQIGAQQYMECSALKLEGLDELFEKAAKAALPPS 195 + +K V+VG+G GKT +L+ Y E+IPTVFDNY ++ V+ + + +NLWDTAGQE YD+LRT++Y +F++CF I+SP S + KW PEV PI LVG KKDLR D E + KL+EQ+L+P T+ +G +AKQIGA +YMECSAL+ +G+ E+F +A +A L P+ Sbjct: 1 MQTIKCVVVGDGAVGKTCLLISYTTNAFPEEYIPTVFDNYSAQMSVDGRTVSLNLWDTAGQEEYDRLRTLSYPQTNVFIICFSISSPSSHANVRHKWHPEVCHHCPNVPILLVGTKKDLRSDTETVKKLKEQSLAPTTHQQGNALAKQIGAVKYMECSALQQDGVREVFAEAVRAVLYPA 180
BLAST of rho-related gtp-binding isoform x1 vs. nr
Match: gi|704170642|ref|XP_010131653.1| (PREDICTED: rho-related GTP-binding protein RhoG-like [Buceros rhinoceros silvestris] >gi|676700850|gb|KFO83357.1| Rho-related GTP-binding protein RhoG [Buceros rhinoceros silvestris]) HSP 1 Score: 190.66 bits (483), Expect = 3.455e-58 Identity = 90/191 (47.12%), Postives = 124/191 (64.92%), Query Frame = 0 Query: 17 LDPVKIVIVGEGGAGKTSVLMGYKNKKISLEWIPTVFDNYIIKVPVNDQEIRVNLWDTAGQEAYDKLRTVTYDGAKLFLLCFDIASPYSLEQIPKKWAPEVRGFT-KAPIFLVGNKKDLREDEEIITKLQEQNLSPVTYNEGMKVAKQIGAQQYMECSALKLEGLDELFEKAAKAALPP--SRPARFCALI 204 + +K V+VG+G GKT +L+ Y E+IPTVFDNY ++ V+ + + +NLWDTAGQE YD+LRT++Y +F++CF I SP S + KW PEV PI LVG K+DLR D E + KL+EQ+L+P T +G +AKQIGA +Y+ECSAL EG+ E+F +A +A L P R R C L+ Sbjct: 1 MQTIKCVVVGDGAVGKTCLLISYTTNAFPEEYIPTVFDNYSAQMTVDGRTVSLNLWDTAGQEEYDRLRTLSYPQTNVFVICFSIGSPSSYANVRHKWHPEVSHHCPNVPILLVGTKRDLRNDLETVKKLKEQSLAPTTLQQGTSLAKQIGAVKYLECSALNQEGVREVFAEAVRAVLYPVTKRNTRKCVLL 191
BLAST of rho-related gtp-binding isoform x1 vs. nr
Match: gi|929081519|ref|XP_014051207.1| (PREDICTED: rho-related GTP-binding protein RhoG-like [Salmo salar]) HSP 1 Score: 190.66 bits (483), Expect = 3.729e-58 Identity = 90/191 (47.12%), Postives = 125/191 (65.45%), Query Frame = 0 Query: 17 LDPVKIVIVGEGGAGKTSVLMGYKNKKISLEWIPTVFDNYIIKVPVNDQEIRVNLWDTAGQEAYDKLRTVTYDGAKLFLLCFDIASPYSLEQIPKKWAPEVRGFTKA-PIFLVGNKKDLREDEEIITKLQEQNLSPVTYNEGMKVAKQIGAQQYMECSALKLEGLDELFEKAAKAALPPSRPA--RFCALI 204 + +K V+VG+G GKT +L+ Y E+IPTVFDNY +V V+ + I +NLWDTAGQE YD+LRT++Y +F++CF I+SP S E + KW PEV P+ LVG K DLR DEE KL+EQ+ SPVT+++G +A+QI A +Y+ECSAL +G+ E+F +A +A L P R C L+ Sbjct: 1 MQSIKCVVVGDGAVGKTCLLISYTTGAFPKEYIPTVFDNYSSQVTVDGRSISLNLWDTAGQEEYDRLRTLSYPQTNIFIICFSISSPASYENVKHKWHPEVTHHCPGVPVLLVGTKSDLRNDEETQRKLKEQSQSPVTHHQGAGLARQIQAARYLECSALNQDGIKEVFAEAVRAFLNPQHTTSKRSCRLL 191
BLAST of rho-related gtp-binding isoform x1 vs. nr
Match: gi|1069385065|ref|XP_018087625.1| (PREDICTED: ras homolog gene family, member G (rho G) S homeolog isoform X1 [Xenopus laevis] >gi|1069385067|ref|XP_018087626.1| PREDICTED: ras homolog gene family, member G (rho G) S homeolog isoform X1 [Xenopus laevis] >gi|1069385069|ref|XP_018087627.1| PREDICTED: ras homolog gene family, member G (rho G) S homeolog isoform X1 [Xenopus laevis] >gi|1069385071|ref|XP_018087628.1| PREDICTED: ras homolog gene family, member G (rho G) S homeolog isoform X1 [Xenopus laevis] >gi|1069385073|ref|XP_018087629.1| PREDICTED: ras homolog gene family, member G (rho G) S homeolog isoform X1 [Xenopus laevis] >gi|1050363538|gb|OCT65742.1| hypothetical protein XELAEV_18041985mg [Xenopus laevis]) HSP 1 Score: 190.274 bits (482), Expect = 4.537e-58 Identity = 86/179 (48.04%), Postives = 120/179 (67.04%), Query Frame = 0 Query: 17 LDPVKIVIVGEGGAGKTSVLMGYKNKKISLEWIPTVFDNYIIKVPVNDQEIRVNLWDTAGQEAYDKLRTVTYDGAKLFLLCFDIASPYSLEQIPKKWAPEVRGFT-KAPIFLVGNKKDLREDEEIITKLQEQNLSPVTYNEGMKVAKQIGAQQYMECSALKLEGLDELFEKAAKAALPP 194 + +K V+VG+G GKT +L+ Y E+IPTVFDNY ++ V+ + + +NLWDTAGQE YD+LRT++Y +F++CF I SP S + KW PEV PI LVG K+DLR D E I KL+EQ+L+P T+ +G +AKQIGA +YMECSAL +G+ ++FE+A +A P Sbjct: 1 MQTIKCVVVGDGAVGKTCLLISYTTNAFPEEYIPTVFDNYSAQMTVDGRTVSLNLWDTAGQEEYDRLRTLSYPQTNVFIICFSIGSPSSHANVRHKWHPEVSHHCPNVPILLVGTKQDLRNDTETIKKLKEQSLAPTTHQQGSSLAKQIGAVRYMECSALHQQGIRQVFEEAVRAVFYP 179
BLAST of rho-related gtp-binding isoform x1 vs. nr
Match: gi|831473914|ref|XP_012715295.1| (rho-related GTP-binding protein RhoG-like [Fundulus heteroclitus] >gi|831473917|ref|XP_012715351.1| rho-related GTP-binding protein RhoG-like [Fundulus heteroclitus]) HSP 1 Score: 190.274 bits (482), Expect = 4.688e-58 Identity = 88/179 (49.16%), Postives = 121/179 (67.60%), Query Frame = 0 Query: 17 LDPVKIVIVGEGGAGKTSVLMGYKNKKISLEWIPTVFDNYIIKVPVNDQEIRVNLWDTAGQEAYDKLRTVTYDGAKLFLLCFDIASPYSLEQIPKKWAPEVRGFT-KAPIFLVGNKKDLREDEEIITKLQEQNLSPVTYNEGMKVAKQIGAQQYMECSALKLEGLDELFEKAAKAALPP 194 + +K V+VG+G GKT +L+ Y E+IPTVFDNY ++ V+ + + +NLWDTAGQE YD+LRT++Y +F++CF I SP S + KW PEV PI LVG KKDLR DEE + KL+EQ+L+P T+ +G +AKQIGA +YMECSALK + + E+F +A +A L P Sbjct: 1 MQTIKCVVVGDGAVGKTCLLISYTTNAFPEEYIPTVFDNYSAQMSVDGRTVSLNLWDTAGQEEYDRLRTLSYPQTNVFIICFSIGSPSSHANVRHKWHPEVSHHCPNVPILLVGTKKDLRGDEETVKKLKEQSLAPTTHQQGNALAKQIGAVKYMECSALKQDNVREVFAEAVRAVLYP 179
BLAST of rho-related gtp-binding isoform x1 vs. nr
Match: gi|1367497633|ref|XP_024232544.1| (rho-related GTP-binding protein RhoG-like [Oncorhynchus tshawytscha] >gi|1367497635|ref|XP_024232545.1| rho-related GTP-binding protein RhoG-like [Oncorhynchus tshawytscha]) HSP 1 Score: 190.274 bits (482), Expect = 4.897e-58 Identity = 89/191 (46.60%), Postives = 125/191 (65.45%), Query Frame = 0 Query: 17 LDPVKIVIVGEGGAGKTSVLMGYKNKKISLEWIPTVFDNYIIKVPVNDQEIRVNLWDTAGQEAYDKLRTVTYDGAKLFLLCFDIASPYSLEQIPKKWAPEVRGFTKA-PIFLVGNKKDLREDEEIITKLQEQNLSPVTYNEGMKVAKQIGAQQYMECSALKLEGLDELFEKAAKAALPPSRPA--RFCALI 204 + +K V+VG+G GKT +L+ Y E+IPTVFDNY +V ++ + I +NLWDTAGQE YD+LRT++Y +F++CF I+SP S E + KW PEV P+ LVG K DLR DEE KL+EQ+ SPVT+++G +A+QI A +Y+ECSAL +G+ E+F +A +A L P R C L+ Sbjct: 1 MQSIKCVVVGDGAVGKTCLLISYTTGAFPKEYIPTVFDNYSSQVTIDGRSISLNLWDTAGQEEYDRLRTLSYPQTNIFIICFSISSPASYENVKHKWHPEVSHHCPGVPVLLVGTKSDLRNDEETQRKLKEQSQSPVTHHQGAGLARQIQAARYLECSALNQDGIKEVFAEAVRAFLNPQHTTSKRSCRLL 191
BLAST of rho-related gtp-binding isoform x1 vs. nr
Match: gi|1049277051|ref|XP_017579019.1| (PREDICTED: rho-related GTP-binding protein RhoG-like [Pygocentrus nattereri]) HSP 1 Score: 190.274 bits (482), Expect = 5.831e-58 Identity = 89/191 (46.60%), Postives = 125/191 (65.45%), Query Frame = 0 Query: 17 LDPVKIVIVGEGGAGKTSVLMGYKNKKISLEWIPTVFDNYIIKVPVNDQEIRVNLWDTAGQEAYDKLRTVTYDGAKLFLLCFDIASPYSLEQIPKKWAPEVRGFT-KAPIFLVGNKKDLREDEEIITKLQEQNLSPVTYNEGMKVAKQIGAQQYMECSALKLEGLDELFEKAAKAALPP--SRPARFCALI 204 + +K V+VG+G GKT +L+ Y E+IPTVFDNY ++ V+ + + +NLWDTAGQE YD+LRT++Y +F++CF I SP S + KW PEV PI LVG KKDLR D E + KL+EQNL+P T+ +G +AKQI A +Y+ECSAL EG+ E+F +A +A L P + ++ C L+ Sbjct: 1 MQTIKCVVVGDGAVGKTCLLISYTTNAFPEEYIPTVFDNYSAQMSVDGRTVSLNLWDTAGQEEYDRLRTLSYPQTNVFIICFSIGSPSSYANVRHKWHPEVSHHCPSVPILLVGTKKDLRSDSETVKKLKEQNLAPTTHQQGSALAKQINAVKYLECSALLQEGVREVFAEAVRAVLYPVTKKNSKKCVLL 191 The following BLAST results are available for this feature:
BLAST of rho-related gtp-binding isoform x1 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 25
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BLAST of rho-related gtp-binding isoform x1 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of rho-related gtp-binding isoform x1 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
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The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold79_size400133:200656..201681+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold79_size400133-snap-gene-2.14 ID=maker-scaffold79_size400133-snap-gene-2.14|Name=rho-related gtp-binding isoform x1|organism=Tigriopus kingsejongensis|type=gene|length=1026bp|location=Sequence derived from alignment at scaffold79_size400133:200656..201681+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'rho-related gtp-binding isoform x1' has the following synonyms
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