glutamate-gated chloride channel, maker-scaffold807_size94382-snap-gene-0.18 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of glutamate-gated chloride channel vs. L. salmonis genes
Match: EMLSAG00000011971 (supercontig:LSalAtl2s:LSalAtl2s84:948400:1079594:1 gene:EMLSAG00000011971 transcript:EMLSAT00000011971 description:"maker-LSalAtl2s84-augustus-gene-10.5") HSP 1 Score: 379.407 bits (973), Expect = 8.574e-131 Identity = 199/364 (54.67%), Postives = 244/364 (67.03%), Query Frame = 0 Query: 1 MTDARKVWMPDTFFRNEKEGRFHNILVPNVYIRIFPNGDVLYSIRVSLTLACPMNLKLYPLDRQQCSLRVASYGWTTGDLQYIWKTTEPVQIVKDLHLPRFTLEKYISDYCNIKTNTGEYSCLTVDLTFKREFSYYLLTIYVPCCMLVIVSWVSFWLDPNAVPARVSLGVTTLLTMSTQTASINNSLPPVAYTKAIDVWTGVSNEGSSHRPKFRRYQGNRKAKALQDGTTIVCVTFVFSALLELQWRTGAISLFFSNVILTRIAFAFQPMMRRPVDSSAMMMSKLHQCEIHMKSKKRRNFLQ-----------NW--------LNKFPSRAKKIDVISRVVFPAIFAIFNLSYWCYYLLQEAQS 345 +TD KVWMPDTFFRNEKE R H I+VPNVY+RIFPNG++LYSIR+SLTLACPM+L+LYPLD+Q C L++ASYGW DL Y+WK +PVQ+V LHLPRFTLE+Y S YC++ TNTGEYSCL V+L FKREFSYYL+TIYVPCCMLVIVSWVSFWLD NA+PARVSLGVTTLLTMSTQT+ IN LPPV+YTKAIDVWTG + + Y+ N + D + + + Q+ S++ + IL+ P +S + CEIH + + + NW L KFPSRAK+IDVISR +FP IFAIFNL+YW YYL +++S Sbjct: 91 LTDPTKVWMPDTFFRNEKEARKHEIIVPNVYVRIFPNGEILYSIRISLTLACPMDLRLYPLDKQVCVLQIASYGWAKDDLIYLWKEKDPVQVVPGLHLPRFTLEQYKSAYCDVTTNTGEYSCLKVELIFKREFSYYLITIYVPCCMLVIVSWVSFWLDQNAIPARVSLGVTTLLTMSTQTSGINAQLPPVSYTKAIDVWTG--------KKRNSEYRNNIRVDPXGD------LVYKSTTSYPHQYN----SMYPHHNILS----------GGPPNS----YNSATPCEIHXPVEHLQAYANSRNGEIDEKNCNWYCCKTRGLLAKFPSRAKRIDVISRFIFPLIFAIFNLAYWLYYLFAKSKS 422
BLAST of glutamate-gated chloride channel vs. L. salmonis genes
Match: EMLSAG00000006195 (supercontig:LSalAtl2s:LSalAtl2s339:168354:194952:-1 gene:EMLSAG00000006195 transcript:EMLSAT00000006195 description:"maker-LSalAtl2s339-augustus-gene-2.20") HSP 1 Score: 344.739 bits (883), Expect = 5.831e-116 Identity = 190/390 (48.72%), Postives = 234/390 (60.00%), Query Frame = 0 Query: 1 MTDARKVWMPDTFFRNEKEGRFHNILVPNVYIRIFPNGDVLYSIRVSLTLACPMNLKLYPLDRQQCSLRVASYGWTTGDLQYIWKTTEPVQIVKDLHLP-RFTLEKYISDYCNIKTNTGEYSCLTVDLTFKREFSYYLLTIYVPCCMLVIVSWVSFWLDPNAVPARVSLGVTTLLTMSTQTASINNSLPPVAYTKAIDVWTGVSNEGSSHRPKFRRYQGNRKAKALQDGTTIVCVTFVFSALLEL---------------------------------QWRTGAISLFFSNVI-------LTRIAFAFQ-PMMRRPVDSSAMMMSKLHQCEIHMKSKKRRNFLQNWLNKFPSRAKKIDVISRVVFPAIFAIFNLSYWCYYLLQEAQSEAK 348 MTD+ KVWM DTFF NEK GRFHNIL N+Y+R+FPNGDVLYSIRVSLT AC M+L L+PLD+Q C+L VASYGWT DL Y WK T PVQ+V +L LP F L+ + + C++K TG YSCL V++TF R+ S+Y+LTIY+PC M+V+VSW+SFW+D AVPARVSLG+T LL MST ASIN+SLPPVAYTKAIDVW G VCVTFVFSALLE + G L N + ++ F F+ P+MRR + + L Q EI ++ RRN + +W +F RAKKIDVISR +FP+ FA FN+ YW YYL QE Q+ K Sbjct: 154 MTDSSKVWMXDTFFXNEKIGRFHNILQDNLYVRVFPNGDVLYSIRVSLTCACSMHLALFPLDKQTCNLDVASYGWTMNDLIYQWKETNPVQMVANLSLPGGFKLDGFTNHNCDVKXATGSYSCLRVEITFARQLSFYVLTIYIPCFMIVLVSWMSFWIDHKAVPARVSLGITXLLAMSTTQASINSSLPPVAYTKAIDVWCG------------------------------VCVTFVFSALLEYALVNYASRSDAQRAAKQKEAKERELEQCAFSTERIEDGGFPLSMVNRLPYDRTENMSHSHFLFKDPLMRRIEGAPMIPPGGLLQNEIPLQV--RRNPISDWCQRFQFRAKKIDVISRFLFPSTFAFFNILYWSYYLTQEQQTSKK 511
BLAST of glutamate-gated chloride channel vs. L. salmonis genes
Match: EMLSAG00000002530 (supercontig:LSalAtl2s:LSalAtl2s14:125553:213163:-1 gene:EMLSAG00000002530 transcript:EMLSAT00000002530 description:"maker-LSalAtl2s14-augustus-gene-3.12") HSP 1 Score: 249.98 bits (637), Expect = 7.419e-82 Identity = 115/121 (95.04%), Postives = 117/121 (96.69%), Query Frame = 0 Query: 1 MTDARKVWMPDTFFRNEKEGRFHNILVPNVYIRIFPNGDVLYSIRVSLTLACPMNLKLYPLDRQQCSLRVASYGWTTGDLQYIWKTTEPVQIVKDLHLPRFTLEKYISDYCNIKTNTGEYS 121 MTDA+KVWMPDTFFRNEKEGRFHNILVPNVYIRIFPNGDVLYSIRVSLTLACPMNLKLYPLDRQQCSLRVASYGWTT DLQYIWK +EPVQIVKDLHLPRFTLEKYISDYCNIKTNTG S Sbjct: 93 MTDAKKVWMPDTFFRNEKEGRFHNILVPNVYIRIFPNGDVLYSIRVSLTLACPMNLKLYPLDRQQCSLRVASYGWTTDDLQYIWKPSEPVQIVKDLHLPRFTLEKYISDYCNIKTNTGAGS 213 HSP 2 Score: 127.872 bits (320), Expect = 1.039e-34 Identity = 57/68 (83.82%), Postives = 64/68 (94.12%), Query Frame = 0 Query: 281 MMSKLHQCEIHMKSKKRRNFLQNWLNKFPSRAKKIDVISRVVFPAIFAIFNLSYWCYYLLQEAQSEAK 348 M+SKLHQCEIHM+ +R+NFLQ WLNKFPSRAKKIDVISRV+FPAIFAIFN+SYW YYLLQEAQSEA+ Sbjct: 222 MISKLHQCEIHMRPHRRQNFLQAWLNKFPSRAKKIDVISRVIFPAIFAIFNMSYWSYYLLQEAQSEAR 289
BLAST of glutamate-gated chloride channel vs. L. salmonis genes
Match: EMLSAG00000004920 (supercontig:LSalAtl2s:LSalAtl2s259:1063168:1099810:-1 gene:EMLSAG00000004920 transcript:EMLSAT00000004920 description:"maker-LSalAtl2s259-augustus-gene-11.12") HSP 1 Score: 245.358 bits (625), Expect = 8.524e-80 Identity = 109/159 (68.55%), Postives = 134/159 (84.28%), Query Frame = 0 Query: 1 MTDARKVWMPDTFFRNEKEGRFHNILVPNVYIRIFPNGDVLYSIRVSLTLACPMNLKLYPLDRQQCSLRVASYGWTTGDLQYIWKTTEPVQIVKDLHLP-RFTLEKYISDYCNIKTNTGEYSCLTVDLTFKREFSYYLLTIYVPCCMLVIVSWVSFWLD 158 MTD++KVWMPDTFFRNEKEG+FHNI+ PN+YIR+FPNGD+LYSIR+SLTL+CPM+L+L+PLD Q C LRVASYGWT D+ Y WK EPVQ VK+L LP F L + YCN+KT TGEYSCLTV +TF+R+ SYY++TIY+P M+V+VSW+SFWLD Sbjct: 1 MTDSKKVWMPDTFFRNEKEGKFHNIIQPNLYIRVFPNGDILYSIRISLTLSCPMSLELFPLDTQTCFLRVASYGWTVDDVVYNWKVPEPVQFVKNLFLPGGFGLHXFSDAYCNVKTATGEYSCLTVIMTFRRQLSYYIITIYIPTLMIVMVSWMSFWLD 159
BLAST of glutamate-gated chloride channel vs. L. salmonis genes
Match: EMLSAG00000009520 (supercontig:LSalAtl2s:LSalAtl2s612:286575:292619:1 gene:EMLSAG00000009520 transcript:EMLSAT00000009520 description:"maker-LSalAtl2s612-augustus-gene-3.13") HSP 1 Score: 239.195 bits (609), Expect = 1.641e-78 Identity = 123/212 (58.02%), Postives = 140/212 (66.04%), Query Frame = 0 Query: 54 MNLKLYPLDRQQCSLRVASYGWTTGDLQYIWKTTEPVQIVKDLHLPRFTLEKYISDYCNIKTNTG-------------------EYSCLTVDLTFKREFSYYLLTIYVPCCMLVIVSWVSFWLDPNAVPARVSLGVTTLLTMSTQTASINNSLPPVAYTKAIDVWTGVSNEGSSHRPKFRRYQGNRKAKALQDGTTIVCVTFVFSALLELQW 246 M+LKLYPLDRQ C +R+ASYGWTT DL Y WK+ +PVQ V+DL+LPRF LE + + YCN KTNTG EYSCL ++L FKREFSYYLLTIYVP CMLVI+SWVSFWLD +VPARV+LGVTTLLTMSTQTA +N SLPPVAYTKAIDVW+G CV FVFSALLE + Sbjct: 1 MDLKLYPLDRQVCEMRIASYGWTTDDLIYRWKSKDPVQFVQDLNLPRFKLESFSTSYCNSKTNTGSVILYTEFPIVKLVFFNSGEYSCLKINLVFKREFSYYLLTIYVPSCMLVIISWVSFWLDSKSVPARVALGVTTLLTMSTQTAGVNRSLPPVAYTKAIDVWSG------------------------------ACVIFVFSALLEFAF 182
BLAST of glutamate-gated chloride channel vs. L. salmonis genes
Match: EMLSAG00000010137 (supercontig:LSalAtl2s:LSalAtl2s66:38297:115963:1 gene:EMLSAG00000010137 transcript:EMLSAT00000010137 description:"snap_masked-LSalAtl2s66-processed-gene-1.3") HSP 1 Score: 204.527 bits (519), Expect = 1.857e-63 Identity = 122/353 (34.56%), Postives = 179/353 (50.71%), Query Frame = 0 Query: 5 RKVWMPDTFFRNEKEGRFHNILVPNVYIRIFPNGDVLYSIRVSLTLACPMNLKLYPLDRQQCSLRVASYGWTTGDLQYIWKTTEP--VQIVKDLHLPRFTLEKYISDYCNIKTNTGEYSCLTVDLTFKREFSYYLLTIYVPCCMLVIVSWVSFWLDPNAVPARVSLGVTTLLTMSTQTASINNSLPPVAYTKAIDVWTGVSNEGSSHRPKFRRYQGNRKAKALQDGTTIVCVTFVFSALLELQ-----WRTGAIS-LFFSNVILTRIAFAFQPMMRRPVDSSAMMMSKLHQCEIHMK------SKKRRNFLQNWLNKFPS----RAKKIDVISRVVFPAIFAIFNLSYWCYYL 339 + +W P+ FF N KE F + VPNV IRI PNG++LY +R+ L +C M L YPLD Q C+++++S+ TT +L W T V + KDL +P+F + K ++ C+ + G YSCL + R ++L+ Y+P ++V +SWVSFW+D + VPARV+LGV TLLT+S+Q + S+P +Y KAIDVW G VC FVF+AL+E WR + + F + A +R + + + +L E +K S+K Q +K P +A KID + R FP F IFN+ YW YY+ Sbjct: 36 KAIWKPEVFFPNAKEANFQFVTVPNVLIRIHPNGEILYILRLRLKFSCMMELSRYPLDTQICAMQISSFSKTTKELLLEWDPTHELSVTVAKDLRMPQFEMTKITTNRCHETNHMGNYSCLVAEFHLHRSIGFHLIQSYLPSVLIVAISWVSFWMDVDCVPARVTLGVITLLTVSSQVSG--TSVPQTSYVKAIDVWMG------------------------------VCTAFVFAALVEFTLVNYLWRKDSDPYMKFDAMTALATIHAVNATSKR---NELVELDQLDSIETGIKNDGDNDSQKCNGLRQK--SKPPMNLRFQAVKIDEVCRFAFPVGFGIFNIIYWAYYI 351
BLAST of glutamate-gated chloride channel vs. L. salmonis genes
Match: EMLSAG00000000919 (supercontig:LSalAtl2s:LSalAtl2s115:697711:740183:1 gene:EMLSAG00000000919 transcript:EMLSAT00000000919 description:"maker-LSalAtl2s115-augustus-gene-7.11") HSP 1 Score: 200.675 bits (509), Expect = 4.257e-60 Identity = 92/195 (47.18%), Postives = 129/195 (66.15%), Query Frame = 0 Query: 5 RKVWMPDTFFRNEKEGRFHNILVPNVYIRIFPNGDVLYSIRVSLTLACPMNLKLYPLDRQQCSLRVASYGWTTGDLQYIWKTTEPVQIVKDLHLPRFTLEKYISDYCNIKTNTGEYSCLTVDLTFKREFSYYLLTIYVPCCMLVIVSWVSFWLDPNAVPARVSLGVTTLLTMSTQTASINNSLPPVAYTKAIDVW 199 K+W PD+FF+N K F + +PN YI ++ + +LY ++++L L+CPM+ K YP D Q C+L + S TT DL + W P+ + K + LP+ L SD C +TG+++CL V FKR YYL YVP C++VI+SW+SFW+ P AVPARV+LGVT+LLT+STQ A+ SLPPV+Y KAIDV+ Sbjct: 76 EKIWRPDSFFKNAKSVTFQTMTIPNHYIWLWKDKTILYMVKLTLVLSCPMHFKNYPHDTQTCNLEIESISHTTDDLIFTWDKEMPLDVDKGIELPQLELISTKSDDCTTVYSTGQFTCLEVVFKFKRRLGYYLFHTYVPTCLIVIMSWISFWIKPEAVPARVTLGVTSLLTLSTQHANSQKSLPPVSYIKAIDVF 270
BLAST of glutamate-gated chloride channel vs. L. salmonis genes
Match: EMLSAG00000009047 (supercontig:LSalAtl2s:LSalAtl2s566:676793:679625:-1 gene:EMLSAG00000009047 transcript:EMLSAT00000009047 description:"maker-LSalAtl2s566-snap-gene-5.58") HSP 1 Score: 196.438 bits (498), Expect = 9.646e-59 Identity = 115/371 (31.00%), Postives = 189/371 (50.94%), Query Frame = 0 Query: 4 ARKVWMPDTFFRNEKEGRFHNILVPNVYIRIFPNGDVLYSIRVSLTLACPMNLKLYPLDRQQCSLRVASYGWTTGDLQYIWKTTEPVQIVKDLHLPRFTLEKYISDYCNIKTNTGEYSCLTVDLTFKREFSYYLLTIYVPCCMLVIVSWVSFWLDPNAVPARVSLGVTTLLTMSTQTASINNSLPPVAYTKAIDVWTGVSNEGSSHRPKFRRYQGNRKAKALQDGTTIVCVTFVFSALLEL-------QWRTGAISL--------------FFSNVILTRI--AFAFQPMMR----------RPVDSSAMMMSKLHQCEIHMKSKKRRNFLQNWLNKFPSRAKKIDVISRVVFPAIFAIFNLSYWCYYLLQ 341 + K+W+PDTFF N+K H++ N +R+ +G + Y +R + TLAC M+L YPLD Q C++ + SYG+T D+ W+ +PV V+D LP+FT+ + ++ IK TG Y L++ +R Y++ Y+P ++V++SWVSFW++ A ARV+LG+TT+LTM+T + + +SLP ++Y KAID++ ++C FVF+ALLE Q I L F S+ +I A F P R RP + + S H+ ++ + +K +++ L + ID SR++FP F +FN++YWC+Y+++ Sbjct: 157 SEKIWVPDTFFANDKNSFLHDVTEQNKMVRLHGDGAITYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVSDVVMYWRQ-KPVVGVEDAQLPQFTIVGWETNERKIKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIY------------------------------LVMCFVFVFAALLEYAASSSSKQPEEDIIELQDLRMSPIPSIRNRFNSSSSSGKIDSATGFPPSFRINRSTHHHSIRPSRKNNIKTSSQHKKKLMGRIRKGSAIVKSILPQIKD-VNIIDKYSRIIFPVSFLLFNVAYWCFYVVE 495
BLAST of glutamate-gated chloride channel vs. L. salmonis genes
Match: EMLSAG00000000070 (supercontig:LSalAtl2s:LSalAtl2s100:516339:598693:-1 gene:EMLSAG00000000070 transcript:EMLSAT00000000070 description:"maker-LSalAtl2s100-snap-gene-5.24") HSP 1 Score: 156.377 bits (394), Expect = 8.794e-46 Identity = 73/180 (40.56%), Postives = 113/180 (62.78%), Query Frame = 0 Query: 7 VWMPDTFFRNEKEGRFHNILVPNVYIRIFPNGDVLYSIRVSLTLACPMNLKLYPLDRQQCSLRVASYGWTTGDLQYIW--KTTEPVQIVKDLHLPRFTLEKYISDYCNIKTNTGEYSCLTVDLTFKREFSYYLLTIYVPCCMLVIVSWVSFWLDPNAVPARVSLGVTTLLTMSTQTASIN 184 +W PD+FF+N K+ F + +PN Y+ ++ + +LY ++++L L+CPMN + YP D Q C L + TT DL +IW + P+ + + LP+ L + C +TG ++CL V F+R YYL Y+P C++V++SW+SFW+ P A ARV+LGVT+LLT+STQ A+IN Sbjct: 52 IWRPDSFFKNAKKVTFQTMTIPNHYLWLYKDKTILYMVKLTLLLSCPMNFENYPHDEQNCKLSM-EMSHTTDDLIFIWLPEDKTPLAVDNGIQLPQLELVSNDTGDCTSVYSTGNFTCLEVIFKFRRRLGYYLFHTYIPTCLIVMMSWISFWIKPEAXXARVTLGVTSLLTLSTQHANIN 230
BLAST of glutamate-gated chloride channel vs. L. salmonis genes
Match: EMLSAG00000002942 (supercontig:LSalAtl2s:LSalAtl2s168:571962:593342:-1 gene:EMLSAG00000002942 transcript:EMLSAT00000002942 description:"maker-LSalAtl2s168-augustus-gene-6.6") HSP 1 Score: 157.918 bits (398), Expect = 2.711e-44 Identity = 89/272 (32.72%), Postives = 135/272 (49.63%), Query Frame = 0 Query: 5 RKVWMPDTFFRNEKEGRFHNILVPNVYIRIFPNGDVLYSIRVSLTLACPMNLKLYPLDRQQCSLRVAS----------------------YGWTTGDLQYIWKTTEPVQIVKDLHLPRFTLEKYISDYCNIKTNTGEYSCLTVDLTFKREFSYYLLTIYVPCCMLVIVSWVSFWLDPNAVPARVSLGVTTLLTMSTQTASINNSLPPVAYTKAIDVWTGVSNEGSSHRPKFRRYQGNRKAKALQDGTTIVCVTFVFSALLEL-----QWRTG 249 + +W P+ +F N K+ F + VPNV +RI P G +LY +R+ L +C M L +PLD Q C++ +AS TT +L WK T+P+ I K++ +P+F + I C + G YSCL L KR ++++ Y+P ++V++SWVSFW+D +V R +LGVTTLLT+S++ + + +P V+Y KAID+W G C F+F+ALLE WR G Sbjct: 85 KALWKPEVYFPNAKDAEFQYVTVPNVLVRIDPGGAILYMLRLKLKFSCMMELSKFPLDEQYCTMEIASCKIIIHKGIISTFKNHNFFSLIVSKTTKELILRWKDTKPIDISKEVKMPQFEISTVIPSICQETFHIGNYSCLLAQLHLKRSLGFHMVQSYIPTILIVVISWVSFWMDVESVAGRTTLGVTTLLTVSSKASDVQAEVPLVSYVKAIDIWMG------------------------------ACTAFIFAALLEFTFVNYMWRRG 326
BLAST of glutamate-gated chloride channel vs. SwissProt
Match: gi|121578|sp|P23416.1|GLRA2_HUMAN (RecName: Full=Glycine receptor subunit alpha-2; Flags: Precursor) HSP 1 Score: 216.083 bits (549), Expect = 2.569e-65 Identity = 125/348 (35.92%), Postives = 182/348 (52.30%), Query Frame = 0 Query: 7 VWMPDTFFRNEKEGRFHNILVPNVYIRIFPNGDVLYSIRVSLTLACPMNLKLYPLDRQQCSLRVASYGWTTGDLQYIWKTTEPVQIVKDLHLPRFTL-EKYISDYCNIKTNTGEYSCLTVDLTFKREFSYYLLTIYVPCCMLVIVSWVSFWLDPNAVPARVSLGVTTLLTMSTQTASINNSLPPVAYTKAIDVWTGVSNEGSSHRPKFRRYQGNRKAKALQDGTTIVCVTFVFSALLE---LQWRTGAISLFFSNVILTRIAFAFQPMMRRP-VDSSAMMMSKLHQCEIHMKSKKRRNFLQNWLNKFPSRAKKI-----------DVISRVVFPAIFAIFNLSYWCYY 338 +W PD FF NEK FH++ N +RI NG VLYSIR++LTL+CPM+LK +P+D Q C++++ S+G+T DL + W + PVQ+ + L LP+F L E+ YC NTG+++C+ V +R+ YYL+ +Y+P ++VI+SWVSFW++ +A PARV+LG+TT+LTM+TQ++ SLP V+Y KAID+W VC+ FVF+ALLE + + + F + + + R + S M Q + K N L + P I D ISR FP F IFN+ YW Y Sbjct: 127 IWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMA------------------------------VCLLFVFAALLEYAAVNFVSRQHKEFLRLRRRQKRQNKEEDVTRESRFNFSGYGMGHCLQVKDGTAVKATP---ANPLPQPPKDGDAIKKKFVDRAKRIDTISRAAFPLAFLIFNIFYWITY 441
BLAST of glutamate-gated chloride channel vs. SwissProt
Match: gi|12644526|sp|P57695.1|GLRA1_BOVIN (RecName: Full=Glycine receptor subunit alpha-1; AltName: Full=Glycine receptor 48 kDa subunit; AltName: Full=Glycine receptor strychnine-binding subunit; Flags: Precursor) HSP 1 Score: 216.083 bits (549), Expect = 2.842e-65 Identity = 130/358 (36.31%), Postives = 182/358 (50.84%), Query Frame = 0 Query: 7 VWMPDTFFRNEKEGRFHNILVPNVYIRIFPNGDVLYSIRVSLTLACPMNLKLYPLDRQQCSLRVASYGWTTGDLQYIWKTTEPVQIVKDLHLPRFTL-EKYISDYCNIKTNTGEYSCLTVDLTFKREFSYYLLTIYVPCCMLVIVSWVSFWLDPNAVPARVSLGVTTLLTMSTQTASINNSLPPVAYTKAIDVWTGVSNEGSSHRPKFRRYQGNRKAKALQDGTTIVCVTFVFSALLEL--------QWRTGAISLFFSNVILTRIAFAFQ---PMMRRPVDSSAMMMSKLHQCEIHMKSKKRRNFLQNWLNKFPSRAK--------------KIDVISRVVFPAIFAIFNLSYWCYY 338 +W PD FF NEK FH I N +RI NG+VLYSIR++LTLACPM+LK +P+D Q C +++ S+G+T DL + W+ VQ+ L LP+F L E+ YC NTG+++C+ +R+ YYL+ +Y+P ++VI+SW+SFW++ +A PARV LG+TT+LTM+TQ++ SLP V+Y KAID+W VC+ FVFSALLE Q + + + FQ R S+ M Q + + K N N N P+ +K KID ISR+ FP F IFN+ YW Y Sbjct: 121 IWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMA------------------------------VCLLFVFSALLEYAAVNFVSRQHKELLRFRRKRRHHKSPMLNLFQEDEAGEGRFNFSAYGMGPACLQAKDGISVKGANN--SNTTNPPPAPSKSPEEMRKLFIQRAKKIDKISRIGFPMAFLIFNMFYWIIY 446
BLAST of glutamate-gated chloride channel vs. SwissProt
Match: gi|116242495|sp|P23415.2|GLRA1_HUMAN (RecName: Full=Glycine receptor subunit alpha-1; AltName: Full=Glycine receptor 48 kDa subunit; AltName: Full=Glycine receptor strychnine-binding subunit; Flags: Precursor) HSP 1 Score: 216.083 bits (549), Expect = 3.095e-65 Identity = 130/358 (36.31%), Postives = 182/358 (50.84%), Query Frame = 0 Query: 7 VWMPDTFFRNEKEGRFHNILVPNVYIRIFPNGDVLYSIRVSLTLACPMNLKLYPLDRQQCSLRVASYGWTTGDLQYIWKTTEPVQIVKDLHLPRFTL-EKYISDYCNIKTNTGEYSCLTVDLTFKREFSYYLLTIYVPCCMLVIVSWVSFWLDPNAVPARVSLGVTTLLTMSTQTASINNSLPPVAYTKAIDVWTGVSNEGSSHRPKFRRYQGNRKAKALQDGTTIVCVTFVFSALLEL--------QWRTGAISLFFSNVILTRIAFAFQ---PMMRRPVDSSAMMMSKLHQCEIHMKSKKRRNFLQNWLNKFPSRAK--------------KIDVISRVVFPAIFAIFNLSYWCYY 338 +W PD FF NEK FH I N +RI NG+VLYSIR++LTLACPM+LK +P+D Q C +++ S+G+T DL + W+ VQ+ L LP+F L E+ YC NTG+++C+ +R+ YYL+ +Y+P ++VI+SW+SFW++ +A PARV LG+TT+LTM+TQ++ SLP V+Y KAID+W VC+ FVFSALLE Q + + + FQ R S+ M Q + + K N N N P+ +K KID ISR+ FP F IFN+ YW Y Sbjct: 121 IWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMA------------------------------VCLLFVFSALLEYAAVNFVSRQHKELLRFRRKRRHHKSPMLNLFQEDEAGEGRFNFSAYGMGPACLQAKDGISVKGANN--SNTTNPPPAPSKSPEEMRKLFIQRAKKIDKISRIGFPMAFLIFNMFYWIIY 446
BLAST of glutamate-gated chloride channel vs. SwissProt
Match: gi|12644459|sp|Q64018.2|GLRA1_MOUSE (RecName: Full=Glycine receptor subunit alpha-1; AltName: Full=Glycine receptor 48 kDa subunit; AltName: Full=Glycine receptor strychnine-binding subunit; Flags: Precursor) HSP 1 Score: 209.92 bits (533), Expect = 6.688e-63 Identity = 102/238 (42.86%), Postives = 144/238 (60.50%), Query Frame = 0 Query: 7 VWMPDTFFRNEKEGRFHNILVPNVYIRIFPNGDVLYSIRVSLTLACPMNLKLYPLDRQQCSLRVASYGWTTGDLQYIWKTTEPVQIVKDLHLPRFTL-EKYISDYCNIKTNTGEYSCLTVDLTFKREFSYYLLTIYVPCCMLVIVSWVSFWLDPNAVPARVSLGVTTLLTMSTQTASINNSLPPVAYTKAIDVWTGVSNEGSSHRPKFRRYQGNRKAKALQDGTTIVCVTFVFSALLE 243 +W PD FF NEK FH I N +RI NG+VLYSIR++LTLACPM+LK +P+D Q C +++ S+G+T DL + W+ VQ+ L LP+F L E+ YC NTG+++C+ +R+ YYL+ +Y+P ++VI+SW+SFW++ +A PARV LG+TT+LTM+TQ++ SLP V+Y KAID+W VC+ FVFSALLE Sbjct: 121 IWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMA------------------------------VCLLFVFSALLE 328
BLAST of glutamate-gated chloride channel vs. SwissProt
Match: gi|12230887|sp|P07727.4|GLRA1_RAT (RecName: Full=Glycine receptor subunit alpha-1; AltName: Full=Glycine receptor 48 kDa subunit; AltName: Full=Glycine receptor strychnine-binding subunit; Flags: Precursor) HSP 1 Score: 209.92 bits (533), Expect = 8.451e-63 Identity = 102/238 (42.86%), Postives = 144/238 (60.50%), Query Frame = 0 Query: 7 VWMPDTFFRNEKEGRFHNILVPNVYIRIFPNGDVLYSIRVSLTLACPMNLKLYPLDRQQCSLRVASYGWTTGDLQYIWKTTEPVQIVKDLHLPRFTL-EKYISDYCNIKTNTGEYSCLTVDLTFKREFSYYLLTIYVPCCMLVIVSWVSFWLDPNAVPARVSLGVTTLLTMSTQTASINNSLPPVAYTKAIDVWTGVSNEGSSHRPKFRRYQGNRKAKALQDGTTIVCVTFVFSALLE 243 +W PD FF NEK FH I N +RI NG+VLYSIR++LTLACPM+LK +P+D Q C +++ S+G+T DL + W+ VQ+ L LP+F L E+ YC NTG+++C+ +R+ YYL+ +Y+P ++VI+SW+SFW++ +A PARV LG+TT+LTM+TQ++ SLP V+Y KAID+W VC+ FVFSALLE Sbjct: 121 IWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMA------------------------------VCLLFVFSALLE 328
BLAST of glutamate-gated chloride channel vs. SwissProt
Match: gi|74894417|sp|P91730.1|GLUCB_HAECO (RecName: Full=Glutamate-gated chloride channel subunit beta; Short=Glu-Cl subunit beta; AltName: Full=Avermectin-sensitive glutamate-gated chloride channel subunit; AltName: Full=HG4; Flags: Precursor) HSP 1 Score: 200.675 bits (509), Expect = 1.670e-59 Identity = 133/339 (39.23%), Postives = 174/339 (51.33%), Query Frame = 0 Query: 7 VWMPDTFFRNEKEGRFHNILVPNVYIRIFPNGDVLYSIRVSLTLACPMNLKLYPLDRQQCSLRVASYGWTTGDLQYIWKTTEPVQIVKDL--HLPRFTLEKYIS-DYCNIKTNTGEYSCLTVDLTFKREFSYYLLTIYVPCCMLVIVSWVSFWLDPNAVPARVSLGVTTLLTMSTQTASINNSLPPVAYTKAIDVWTGVSNEGSSHRPKFRRYQGNRKAKALQDGTTIVCVTFVFSALLELQWRTGAISLFFSNVILTRIAFAFQPMMRRPVDSSAMMMSKLHQ----CEIHMKSKKR---RNFLQNWLNKFPSRAKKIDVISRVVFPAIFAIFNLSYW 335 +W+PDTFF EK H I N+++RI P+G VLYS R+S+T +C M L+LYPLD Q C + SY T D+ Y W PVQ+ + LP F L + D C TNTG Y+CL + LT KR+FSYYL+ +Y P M+VIVSWVSFW+D ++ RV+LGVTTLLTM+T A+IN LPPV+Y K +DVW G C TFVF ALLE + + S + +R A Q RR + M + + Q C H+ R+ L+ + K KID +R P F FN YW Sbjct: 119 LWIPDTFFPTEKAAHRHLIDTDNMFLRIHPDGKVLYSSRISITSSCHMQLQLYPLDLQFCDFDLVSYAHTMKDIVYEWDPLAPVQLKPGVGSDLPNFQLTNITTNDDCTSHTNTGSYACLRMQLTLKRQFSYYLVQLYGPTTMIVIVSWVSFWIDMHSTAGRVALGVTTLLTMTTMQAAINAKLPPVSYVKVVDVWLG------------------------------ACQTFVFGALLEYAFVSYQDSQRQTEQAKSRAARKAQ--KRR----AKMELVEREQYQPPCTCHLYQDYEPSFRDRLRRYFTKPDYLPAKIDYYARFCVPLGFLAFNAIYW 421
BLAST of glutamate-gated chloride channel vs. SwissProt
Match: gi|262527577|sp|Q5JXX5.3|GLRA4_HUMAN (RecName: Full=Glycine receptor subunit alpha-4; Flags: Precursor) HSP 1 Score: 199.519 bits (506), Expect = 3.024e-59 Identity = 101/240 (42.08%), Postives = 146/240 (60.83%), Query Frame = 0 Query: 7 VWMPDTFFRNEKEGRFHNILVPNVYIRIFPNGDVLYSIRVSLTLACPMNLKLYPLDRQQCSLRVASYGWTTGDLQYIWKTTEP-VQIVKDLHLPRFTL--EKYISDYCNIKTNTGEYSCLTVDLTFKREFSYYLLTIYVPCCMLVIVSWVSFWLDPNAVPARVSLGVTTLLTMSTQTASINNSLPPVAYTKAIDVWTGVSNEGSSHRPKFRRYQGNRKAKALQDGTTIVCVTFVFSALLE 243 +W PD FF NEK FH + N +RIF NG+VLYSIR++L L+C M+LK +P+D Q C++++ S+G+T DL + W P VQ+ + L LP+F L EK + C NTG+++C+ V +R+ YYL+ +Y+P ++VI+SWVSFW++ +A PARV LG+TT+LTM+TQ++ SLP V+Y KAID+W VC+ FVF+ALLE Sbjct: 127 IWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCLMDLKNFPMDIQTCTMQLESFGYTMKDLVFEWLEDAPAVQVAEGLTLPQFILRDEKDLG-CCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMA------------------------------VCLLFVFAALLE 335
BLAST of glutamate-gated chloride channel vs. SwissProt
Match: gi|23831128|sp|P18505.2|GBRB1_HUMAN (RecName: Full=Gamma-aminobutyric acid receptor subunit beta-1; AltName: Full=GABA(A) receptor subunit beta-1; Flags: Precursor) HSP 1 Score: 196.052 bits (497), Expect = 2.225e-57 Identity = 114/366 (31.15%), Postives = 187/366 (51.09%), Query Frame = 0 Query: 4 ARKVWMPDTFFRNEKEGRFHNILVPNVYIRIFPNGDVLYSIRVSLTLACPMNLKLYPLDRQQCSLRVASYGWTTGDLQYIWKTTE-PVQIVKDLHLPRFTLEKYISDYCNIKTNTGEYSCLTVDLTFKREFSYYLLTIYVPCCMLVIVSWVSFWLDPNAVPARVSLGVTTLLTMSTQTASINNSLPPVAYTKAIDVW------------------------TGVSNEGSSHRPKFRRYQGNRKAKALQDGTTIVCVTFVFSALLELQWRTGAISLFFSNVILTRIAFAFQP---MMRRPVDSSAMMMSKLHQCEIHMKSKKRRNFLQNWLNKFP--SRAKKIDVISRVVFPAIFAIFNLSYWCYYL 339 A ++W+PDT+F N+K+ H + V N IR+ P+G VLY +R++ T AC M+L+ YPLD Q C+L + SYG+TT D+++ W E V V + LP+F++ Y ++ TG Y L++ KR Y++L Y+P ++ I+SWVSFW++ +A ARV+LG+TT+LTM+T + + +LP + Y KAID++ G +G+S + + N K K + + + + LE++ T + S +++ R+P+ S L + + K + RR Q + K P + ID SR+ FP F++FN+ YW YY+ Sbjct: 113 ADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGVNKIELPQFSIVDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLEYAFVNYIFFGKGPQKKGASKQDQ----SANEKNKLEMNKVQVDAHGNILLSTLEIRNETSGSEVLTSVSDPKATMYSYDSASIQYRKPLSSREAYGRALDRHGVPSKGRIRRRASQLKV-KIPDLTDVNSIDKWSRMFFPITFSLFNVVYWLYYV 473
BLAST of glutamate-gated chloride channel vs. SwissProt
Match: gi|120766|sp|P08220.1|GBRB1_BOVIN (RecName: Full=Gamma-aminobutyric acid receptor subunit beta-1; AltName: Full=GABA(A) receptor subunit beta-1; Flags: Precursor) HSP 1 Score: 195.667 bits (496), Expect = 2.928e-57 Identity = 113/366 (30.87%), Postives = 185/366 (50.55%), Query Frame = 0 Query: 4 ARKVWMPDTFFRNEKEGRFHNILVPNVYIRIFPNGDVLYSIRVSLTLACPMNLKLYPLDRQQCSLRVASYGWTTGDLQYIWKTTE-PVQIVKDLHLPRFTLEKYISDYCNIKTNTGEYSCLTVDLTFKREFSYYLLTIYVPCCMLVIVSWVSFWLDPNAVPARVSLGVTTLLTMSTQTASINNSLPPVAYTKAIDVW------------------------TGVSNEGSSHRPKFRRYQGNRKAKALQDGTTIVCVTFVFSALLELQWRTGAISLFFSNVILTRIAFAFQP---MMRRPVDSSAMMMSKLHQCEIHMKSKKRRNFLQNWLNKFP--SRAKKIDVISRVVFPAIFAIFNLSYWCYYL 339 A ++W+PDT+F N+K+ H + V N IR+ P+G VLY +R++ T AC M+L+ YPLD Q C+L + SYG+TT D+++ W E V V + LP+F++ Y ++ TG Y L++ KR Y++L Y+P ++ I+SWVSFW++ +A ARV+LG+TT+LTM+T + + +LP + Y KAID++ G +G+ + + N K K + + + + LE++ T + +++ R+P+ S L + H K + RR Q + K P + ID SR+ FP F++FN+ YW YY+ Sbjct: 113 ADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGVNKIELPQFSIVDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLEYAFVNYIFFGKGPQKKGAGKQDQ----SANEKNKLEMNKVQVDAHGNILLSTLEIRNETSGSEVLTGVGDPKTTMYSYDSASIQYRKPMSSREGYGRALDRHGAHSKGRIRRRASQLKV-KIPDLTDVNSIDKWSRMFFPITFSLFNVVYWLYYV 473
BLAST of glutamate-gated chloride channel vs. SwissProt
Match: gi|120769|sp|P15431.1|GBRB1_RAT (RecName: Full=Gamma-aminobutyric acid receptor subunit beta-1; AltName: Full=GABA(A) receptor subunit beta-1; Flags: Precursor) HSP 1 Score: 194.897 bits (494), Expect = 6.601e-57 Identity = 113/366 (30.87%), Postives = 186/366 (50.82%), Query Frame = 0 Query: 4 ARKVWMPDTFFRNEKEGRFHNILVPNVYIRIFPNGDVLYSIRVSLTLACPMNLKLYPLDRQQCSLRVASYGWTTGDLQYIWKTTE-PVQIVKDLHLPRFTLEKYISDYCNIKTNTGEYSCLTVDLTFKREFSYYLLTIYVPCCMLVIVSWVSFWLDPNAVPARVSLGVTTLLTMSTQTASINNSLPPVAYTKAIDVW------------------------TGVSNEGSSHRPKFRRYQGNRKAKALQDGTTIVCVTFVFSALLELQWRTGAISLFFSNVILTRIAFAFQP---MMRRPVDSSAMMMSKLHQCEIHMKSKKRRNFLQNWLNKFP--SRAKKIDVISRVVFPAIFAIFNLSYWCYYL 339 A ++W+PDT+F N+K+ H + V N IR+ P+G VLY +R++ T AC M+L+ YPLD Q C+L + SYG+TT D+++ W E V V + LP+F++ Y ++ TG Y L++ KR Y++L Y+P ++ I+SWVSFW++ +A ARV+LG+TT+LTM+T + + +LP + Y KAID++ G +G+S + + N K K + + + + LE++ T + +++ R+P+ S L + + K + RR Q + K P + ID SR+ FP F++FN+ YW YY+ Sbjct: 113 ADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGVNKIELPQFSIVDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLEYAFVNYIFFGKGPQKKGASKQDQ----SANEKNKLEMNKVQVDAHGNILLSTLEIRNETSGSEVLTGVSDPKATMYSYDSASIQYRKPLSSREGFGRGLDRHGVPGKGRIRRRASQLKV-KIPDLTDVNSIDKWSRMFFPITFSLFNVVYWLYYV 473
BLAST of glutamate-gated chloride channel vs. nr
Match: gi|1325313968|ref|XP_023338657.1| (LOW QUALITY PROTEIN: glutamate-gated chloride channel-like [Eurytemora affinis]) HSP 1 Score: 465.692 bits (1197), Expect = 2.298e-160 Identity = 239/348 (68.68%), Postives = 258/348 (74.14%), Query Frame = 0 Query: 1 MTDARKVWMPDTFFRNEKEGRFHNILVPNVYIRIFPNGDVLYSIRVSLTLACPMNLKLYPLDRQQCSLRVASYGWTTGDLQYIWKTTEPVQIVKDLHLPRFTLEKYISDYCNIKTNTGEYSCLTVDLTFKREFSYYLLTIYVPCCMLVIVSWVSFWLDPNAVPARVSLGVTTLLTMSTQTASINNSLPPVAYTKAIDVWTGVSNEGSSHRPKFRRYQGNRKAKALQDGTTIVCVTFVFSALLE--------------LQWRTGAISLFFSNVIL--------TRIAFAFQPMMRRPVDS----SAMMMSKLHQCEIHMKSKKRRNFLQNWLNKFPSRAKKIDVISRVV 322 MTDARKVWMPDTFFRNEKEGRFHNILVPNVYIRIFP+G VLYSIRVSLTLACPMNLKLYPLDRQ+CSLRVASYGWTT DL+Y WKT PVQIVKDLHLPRFTLEKY+SDYCNIKTNTGEYSCLTVDLTFKREFSYYLLTIYVPCCMLVIVSWVSFWLDPNAVPARVSLGVTTLLTMSTQ ASINNSLPPVAYTKAIDVWTG VC+ FVF ALLE ++ R + F +F +PMMRR D+ + ++ +HQCEIHMK +KR+NFL WLNKFPSRAKKIDV+SRV+ Sbjct: 117 MTDARKVWMPDTFFRNEKEGRFHNILVPNVYIRIFPDGYVLYSIRVSLTLACPMNLKLYPLDRQKCSLRVASYGWTTDDLRYQWKTDGPVQIVKDLHLPRFTLEKYVSDYCNIKTNTGEYSCLTVDLTFKREFSYYLLTIYVPCCMLVIVSWVSFWLDPNAVPARVSLGVTTLLTMSTQQASINNSLPPVAYTKAIDVWTG------------------------------VCIFFVFGALLEYALVNYASRSDANRIRKRNAKKKIEFDRAAFDAEHMEEHNGGSFPMKPMMRRSGDALIPGANFPINNIHQCEIHMKPRKRQNFLMAWLNKFPSRAKKIDVLSRVI 434
BLAST of glutamate-gated chloride channel vs. nr
Match: gi|807043641|ref|XP_012162081.1| (glutamate-gated chloride channel isoform X15 [Ceratitis capitata]) HSP 1 Score: 442.195 bits (1136), Expect = 4.305e-151 Identity = 220/368 (59.78%), Postives = 261/368 (70.92%), Query Frame = 0 Query: 1 MTDARKVWMPDTFFRNEKEGRFHNILVPNVYIRIFPNGDVLYSIRVSLTLACPMNLKLYPLDRQQCSLRVASYGWTTGDLQYIWKTTEPVQIVKDLHLPRFTLEKYISDYCNIKTNTGEYSCLTVDLTFKREFSYYLLTIYVPCCMLVIVSWVSFWLDPNAVPARVSLGVTTLLTMSTQTASINNSLPPVAYTKAIDVWTGVSNEGSSHRPKFRRYQGNRKAKALQDGTTIVCVTFVFSALLELQWRTGA-------------------ISLFFSNVIL---TRIAFAFQPMMRRPVDSSAMMMSKLHQCEIHMKSKKRRNFLQNWLNKFPSRAKKIDVISRVVFPAIFAIFNLSYWCYYLLQEAQSE 346 +T+A +VWMPD FF NEKEG FHNI++PNVYIRIFPNG VLYSIR+SLTLACPMNLKLYPLDRQ CSLR+ASYGWTT DL ++WK +PVQ+VK+LHLPRFTLEK+++DYCN KTNTGEYSCL VDL FKREFSYYL+ IY+PCCMLVIVSWVSFWLD AVPARVSLGVTTLLTM+TQT+ IN SLPPV+YTKAIDVWTG VC+TFVF ALLE A SL ++ +L + FA +P++R P D M + KL QCE+HM+ KR N + WL+KFP+R+K+IDVISR+ FP +FA+FNL YW YL +E + E Sbjct: 112 LTEANRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEGDPVQVVKNLHLPRFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTG------------------------------VCLTFVFGALLEFALVNYASRSDIHKENMKKKRRDLEQASLDAASDLLDTDSNATFAMKPLVRHPGD--PMALEKLRQCEVHMQPPKRPNCCKTWLSKFPTRSKRIDVISRITFPLVFALFNLVYWSTYLFREEEDE 447
BLAST of glutamate-gated chloride channel vs. nr
Match: gi|929359156|ref|XP_014088909.1| (PREDICTED: glutamate-gated chloride channel isoform X2 [Bactrocera oleae]) HSP 1 Score: 441.81 bits (1135), Expect = 4.859e-151 Identity = 220/368 (59.78%), Postives = 261/368 (70.92%), Query Frame = 0 Query: 1 MTDARKVWMPDTFFRNEKEGRFHNILVPNVYIRIFPNGDVLYSIRVSLTLACPMNLKLYPLDRQQCSLRVASYGWTTGDLQYIWKTTEPVQIVKDLHLPRFTLEKYISDYCNIKTNTGEYSCLTVDLTFKREFSYYLLTIYVPCCMLVIVSWVSFWLDPNAVPARVSLGVTTLLTMSTQTASINNSLPPVAYTKAIDVWTGVSNEGSSHRPKFRRYQGNRKAKALQDGTTIVCVTFVFSALLELQWRTGA-------------------ISLFFSNVIL---TRIAFAFQPMMRRPVDSSAMMMSKLHQCEIHMKSKKRRNFLQNWLNKFPSRAKKIDVISRVVFPAIFAIFNLSYWCYYLLQEAQSE 346 +T+A +VWMPD FF NEKEG FHNI++PNVYIRIFPNG VLYSIR+SLTLACPMNLKLYPLDRQ CSLR+ASYGWTT DL ++WK +PVQ+VK+LHLPRFTLEK+++DYCN KTNTGEYSCL VDL FKREFSYYL+ IY+PCCMLVIVSWVSFWLD AVPARVSLGVTTLLTM+TQT+ IN SLPPV+YTKAIDVWTG VC+TFVF ALLE A SL ++ +L + FA +P++R P D M + KL QCE+HM+ KR N + WL+KFP+R+K+IDVISR+ FP +FA+FNL YW YL +E + E Sbjct: 113 LTEANRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEGDPVQVVKNLHLPRFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTG------------------------------VCLTFVFGALLEFALVNYASRSDIHKENLKKKRRDLEQASLDAASDLLDTDSNATFAMKPLVRHPGD--PMALEKLRQCEVHMQPPKRPNCCKTWLSKFPTRSKRIDVISRITFPLVFALFNLVYWSTYLFREEEDE 448
BLAST of glutamate-gated chloride channel vs. nr
Match: gi|499011993|ref|XP_004537182.1| (glutamate-gated chloride channel isoform X16 [Ceratitis capitata]) HSP 1 Score: 441.81 bits (1135), Expect = 5.065e-151 Identity = 220/368 (59.78%), Postives = 261/368 (70.92%), Query Frame = 0 Query: 1 MTDARKVWMPDTFFRNEKEGRFHNILVPNVYIRIFPNGDVLYSIRVSLTLACPMNLKLYPLDRQQCSLRVASYGWTTGDLQYIWKTTEPVQIVKDLHLPRFTLEKYISDYCNIKTNTGEYSCLTVDLTFKREFSYYLLTIYVPCCMLVIVSWVSFWLDPNAVPARVSLGVTTLLTMSTQTASINNSLPPVAYTKAIDVWTGVSNEGSSHRPKFRRYQGNRKAKALQDGTTIVCVTFVFSALLELQWRTGA-------------------ISLFFSNVIL---TRIAFAFQPMMRRPVDSSAMMMSKLHQCEIHMKSKKRRNFLQNWLNKFPSRAKKIDVISRVVFPAIFAIFNLSYWCYYLLQEAQSE 346 +T+A +VWMPD FF NEKEG FHNI++PNVYIRIFPNG VLYSIR+SLTLACPMNLKLYPLDRQ CSLR+ASYGWTT DL ++WK +PVQ+VK+LHLPRFTLEK+++DYCN KTNTGEYSCL VDL FKREFSYYL+ IY+PCCMLVIVSWVSFWLD AVPARVSLGVTTLLTM+TQT+ IN SLPPV+YTKAIDVWTG VC+TFVF ALLE A SL ++ +L + FA +P++R P D M + KL QCE+HM+ KR N + WL+KFP+R+K+IDVISR+ FP +FA+FNL YW YL +E + E Sbjct: 113 LTEANRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEGDPVQVVKNLHLPRFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTG------------------------------VCLTFVFGALLEFALVNYASRSDIHKENMKKKRRDLEQASLDAASDLLDTDSNATFAMKPLVRHPGD--PMALEKLRQCEVHMQPPKRPNCCKTWLSKFPTRSKRIDVISRITFPLVFALFNLVYWSTYLFREEEDE 448
BLAST of glutamate-gated chloride channel vs. nr
Match: gi|499011989|ref|XP_004537181.1| (glutamate-gated chloride channel isoform X13 [Ceratitis capitata]) HSP 1 Score: 441.81 bits (1135), Expect = 5.420e-151 Identity = 220/368 (59.78%), Postives = 261/368 (70.92%), Query Frame = 0 Query: 1 MTDARKVWMPDTFFRNEKEGRFHNILVPNVYIRIFPNGDVLYSIRVSLTLACPMNLKLYPLDRQQCSLRVASYGWTTGDLQYIWKTTEPVQIVKDLHLPRFTLEKYISDYCNIKTNTGEYSCLTVDLTFKREFSYYLLTIYVPCCMLVIVSWVSFWLDPNAVPARVSLGVTTLLTMSTQTASINNSLPPVAYTKAIDVWTGVSNEGSSHRPKFRRYQGNRKAKALQDGTTIVCVTFVFSALLELQWRTGA-------------------ISLFFSNVIL---TRIAFAFQPMMRRPVDSSAMMMSKLHQCEIHMKSKKRRNFLQNWLNKFPSRAKKIDVISRVVFPAIFAIFNLSYWCYYLLQEAQSE 346 +T+A +VWMPD FF NEKEG FHNI++PNVYIRIFPNG VLYSIR+SLTLACPMNLKLYPLDRQ CSLR+ASYGWTT DL ++WK +PVQ+VK+LHLPRFTLEK+++DYCN KTNTGEYSCL VDL FKREFSYYL+ IY+PCCMLVIVSWVSFWLD AVPARVSLGVTTLLTM+TQT+ IN SLPPV+YTKAIDVWTG VC+TFVF ALLE A SL ++ +L + FA +P++R P D M + KL QCE+HM+ KR N + WL+KFP+R+K+IDVISR+ FP +FA+FNL YW YL +E + E Sbjct: 113 LTEANRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEGDPVQVVKNLHLPRFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTG------------------------------VCLTFVFGALLEFALVNYASRSDIHKENMKKKRRDLEQASLDAASDLLDTDSNATFAMKPLVRHPGD--PMALEKLRQCEVHMQPPKRPNCCKTWLSKFPTRSKRIDVISRITFPLVFALFNLVYWSTYLFREEEDE 448
BLAST of glutamate-gated chloride channel vs. nr
Match: gi|807043632|ref|XP_012162077.1| (glutamate-gated chloride channel isoform X12 [Ceratitis capitata]) HSP 1 Score: 441.81 bits (1135), Expect = 5.430e-151 Identity = 221/373 (59.25%), Postives = 263/373 (70.51%), Query Frame = 0 Query: 1 MTDARKVWMPDTFFRNEKEGRFHNILVPNVYIRIFPNGDVLYSIRVSLTLACPMNLKLYPLDRQQCSLRVASYGWTTGDLQYIWKTTEPVQIVKDLHLPRFTLEKYISDYCNIKTNTGEYSCLTVDLTFKREFSYYLLTIYVPCCMLVIVSWVSFWLDPNAVPARVSLGVTTLLTMSTQTASINNSLPPVAYTKAIDVWTGVSNEGSSHRPKFRRYQGNRKAKALQDGTTIVCVTFVFSALLELQW-----RTG-------------------AISLFFSNVIL---TRIAFAFQPMMRRPVDSSAMMMSKLHQCEIHMKSKKRRNFLQNWLNKFPSRAKKIDVISRVVFPAIFAIFNLSYWCYYLLQEAQSE 346 +T+A +VWMPD FF NEKEG FHNI++PNVYIRIFPNG VLYSIR+SLTLACPMNLKLYPLDRQ CSLR+ASYGWTT DL ++WK +PVQ+VK+LHLPRFTLEK+++DYCN KTNTGEYSCL VDL FKREFSYYL+ IY+PCCMLVIVSWVSFWLD AVPARVSLGVTTLLTM+TQT+ IN SLPPV+YTKAIDVWTG VC+TFVF ALLE R+G SL ++ +L + FA +P++R P D M + KL QCE+HM+ KR N + WL+KFP+R+K+IDVISR+ FP +FA+FNL YW YL +E + E Sbjct: 112 LTEANRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEGDPVQVVKNLHLPRFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTG------------------------------VCLTFVFGALLEFALVNYASRSGLNKANIHKENMKKKRRDLEQASLDAASDLLDTDSNATFAMKPLVRHPGD--PMALEKLRQCEVHMQPPKRPNCCKTWLSKFPTRSKRIDVISRITFPLVFALFNLVYWSTYLFREEEDE 452
BLAST of glutamate-gated chloride channel vs. nr
Match: gi|807043639|ref|XP_012162080.1| (glutamate-gated chloride channel isoform X14 [Ceratitis capitata]) HSP 1 Score: 441.81 bits (1135), Expect = 5.844e-151 Identity = 220/368 (59.78%), Postives = 261/368 (70.92%), Query Frame = 0 Query: 1 MTDARKVWMPDTFFRNEKEGRFHNILVPNVYIRIFPNGDVLYSIRVSLTLACPMNLKLYPLDRQQCSLRVASYGWTTGDLQYIWKTTEPVQIVKDLHLPRFTLEKYISDYCNIKTNTGEYSCLTVDLTFKREFSYYLLTIYVPCCMLVIVSWVSFWLDPNAVPARVSLGVTTLLTMSTQTASINNSLPPVAYTKAIDVWTGVSNEGSSHRPKFRRYQGNRKAKALQDGTTIVCVTFVFSALLELQWRTGA-------------------ISLFFSNVIL---TRIAFAFQPMMRRPVDSSAMMMSKLHQCEIHMKSKKRRNFLQNWLNKFPSRAKKIDVISRVVFPAIFAIFNLSYWCYYLLQEAQSE 346 +T+A +VWMPD FF NEKEG FHNI++PNVYIRIFPNG VLYSIR+SLTLACPMNLKLYPLDRQ CSLR+ASYGWTT DL ++WK +PVQ+VK+LHLPRFTLEK+++DYCN KTNTGEYSCL VDL FKREFSYYL+ IY+PCCMLVIVSWVSFWLD AVPARVSLGVTTLLTM+TQT+ IN SLPPV+YTKAIDVWTG VC+TFVF ALLE A SL ++ +L + FA +P++R P D M + KL QCE+HM+ KR N + WL+KFP+R+K+IDVISR+ FP +FA+FNL YW YL +E + E Sbjct: 112 LTEANRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEGDPVQVVKNLHLPRFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTG------------------------------VCLTFVFGALLEFALVNYASRSDIHKENMKKKRRDLEQASLDAASDLLDTDSNATFAMKPLVRHPGD--PMALEKLRQCEVHMQPPKRPNCCKTWLSKFPTRSKRIDVISRITFPLVFALFNLVYWSTYLFREEEDE 447
BLAST of glutamate-gated chloride channel vs. nr
Match: gi|499011997|ref|XP_004537183.1| (glutamate-gated chloride channel isoform X17 [Ceratitis capitata]) HSP 1 Score: 441.425 bits (1134), Expect = 6.433e-151 Identity = 220/368 (59.78%), Postives = 261/368 (70.92%), Query Frame = 0 Query: 1 MTDARKVWMPDTFFRNEKEGRFHNILVPNVYIRIFPNGDVLYSIRVSLTLACPMNLKLYPLDRQQCSLRVASYGWTTGDLQYIWKTTEPVQIVKDLHLPRFTLEKYISDYCNIKTNTGEYSCLTVDLTFKREFSYYLLTIYVPCCMLVIVSWVSFWLDPNAVPARVSLGVTTLLTMSTQTASINNSLPPVAYTKAIDVWTGVSNEGSSHRPKFRRYQGNRKAKALQDGTTIVCVTFVFSALLELQWRTGA-------------------ISLFFSNVIL---TRIAFAFQPMMRRPVDSSAMMMSKLHQCEIHMKSKKRRNFLQNWLNKFPSRAKKIDVISRVVFPAIFAIFNLSYWCYYLLQEAQSE 346 +T+A +VWMPD FF NEKEG FHNI++PNVYIRIFPNG VLYSIR+SLTLACPMNLKLYPLDRQ CSLR+ASYGWTT DL ++WK +PVQ+VK+LHLPRFTLEK+++DYCN KTNTGEYSCL VDL FKREFSYYL+ IY+PCCMLVIVSWVSFWLD AVPARVSLGVTTLLTM+TQT+ IN SLPPV+YTKAIDVWTG VC+TFVF ALLE A SL ++ +L + FA +P++R P D M + KL QCE+HM+ KR N + WL+KFP+R+K+IDVISR+ FP +FA+FNL YW YL +E + E Sbjct: 112 LTEANRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEGDPVQVVKNLHLPRFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTG------------------------------VCLTFVFGALLEFALVNYASRSDIHKENMKKKRRDLEQASLDAASDLLDTDSNATFAMKPLVRHPGD--PMALEKLRQCEVHMQPPKRPNCCKTWLSKFPTRSKRIDVISRITFPLVFALFNLVYWSTYLFREEEDE 447
BLAST of glutamate-gated chloride channel vs. nr
Match: gi|1135080267|ref|XP_019892422.1| (PREDICTED: glutamate-gated chloride channel isoform X2 [Musca domestica]) HSP 1 Score: 441.81 bits (1135), Expect = 7.313e-151 Identity = 220/373 (58.98%), Postives = 265/373 (71.05%), Query Frame = 0 Query: 1 MTDARKVWMPDTFFRNEKEGRFHNILVPNVYIRIFPNGDVLYSIRVSLTLACPMNLKLYPLDRQQCSLRVASYGWTTGDLQYIWKTTEPVQIVKDLHLPRFTLEKYISDYCNIKTNTGEYSCLTVDLTFKREFSYYLLTIYVPCCMLVIVSWVSFWLDPNAVPARVSLGVTTLLTMSTQTASINNSLPPVAYTKAIDVWTGVSNEGSSHRPKFRRYQGNRKAKALQDGTTIVCVTFVFSALLELQW-----RTGA-------------------ISLFFSNVIL---TRIAFAFQPMMRRPVDSSAMMMSKLHQCEIHMKSKKRRNFLQNWLNKFPSRAKKIDVISRVVFPAIFAIFNLSYWCYYLLQEAQSE 346 +T+A +VWMPD FF NEKEG FHNI++PNVYIRIFPNG VLYSIR+SLTLACPMNLKLYPLDRQ CSLR+ASYGWTT DL ++WK +PVQ+VK+LHLPRFTLEK+++DYCN KTNTGEYSCL VDL FKREFSYYL+ IY+PCCMLVIVSWVSFWLD AVPARVSLGVTTLLTM+TQT+ IN SLPPV+YTKAIDVWTG VC+TFVF ALLE R+G+ S+ ++ +L + FA +P++R P D A + KL QCE+HM++ KR N + WL+KFP+R+K+IDVISR+ FP +FA+FNL YW YL +E + E Sbjct: 113 LTEANRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEGDPVQVVKNLHLPRFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTG------------------------------VCLTFVFGALLEFALVNYASRSGSNKANMHKENMKKKRRDLEQASIDAASDLLDTDSNATFAMKPLVRHPGDPLA--LEKLRQCEVHMQAPKRPNCCKTWLSKFPTRSKRIDVISRITFPLVFALFNLVYWSTYLFREEEDE 453
BLAST of glutamate-gated chloride channel vs. nr
Match: gi|807043623|ref|XP_012162074.1| (glutamate-gated chloride channel isoform X8 [Ceratitis capitata]) HSP 1 Score: 441.425 bits (1134), Expect = 8.520e-151 Identity = 221/373 (59.25%), Postives = 263/373 (70.51%), Query Frame = 0 Query: 1 MTDARKVWMPDTFFRNEKEGRFHNILVPNVYIRIFPNGDVLYSIRVSLTLACPMNLKLYPLDRQQCSLRVASYGWTTGDLQYIWKTTEPVQIVKDLHLPRFTLEKYISDYCNIKTNTGEYSCLTVDLTFKREFSYYLLTIYVPCCMLVIVSWVSFWLDPNAVPARVSLGVTTLLTMSTQTASINNSLPPVAYTKAIDVWTGVSNEGSSHRPKFRRYQGNRKAKALQDGTTIVCVTFVFSALLELQW-----RTG-------------------AISLFFSNVIL---TRIAFAFQPMMRRPVDSSAMMMSKLHQCEIHMKSKKRRNFLQNWLNKFPSRAKKIDVISRVVFPAIFAIFNLSYWCYYLLQEAQSE 346 +T+A +VWMPD FF NEKEG FHNI++PNVYIRIFPNG VLYSIR+SLTLACPMNLKLYPLDRQ CSLR+ASYGWTT DL ++WK +PVQ+VK+LHLPRFTLEK+++DYCN KTNTGEYSCL VDL FKREFSYYL+ IY+PCCMLVIVSWVSFWLD AVPARVSLGVTTLLTM+TQT+ IN SLPPV+YTKAIDVWTG VC+TFVF ALLE R+G SL ++ +L + FA +P++R P D M + KL QCE+HM+ KR N + WL+KFP+R+K+IDVISR+ FP +FA+FNL YW YL +E + E Sbjct: 113 LTEANRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEGDPVQVVKNLHLPRFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTG------------------------------VCLTFVFGALLEFALVNYASRSGLNKANIHKENMKKKRRDLEQASLDAASDLLDTDSNATFAMKPLVRHPGD--PMALEKLRQCEVHMQPPKRPNCCKTWLSKFPTRSKRIDVISRITFPLVFALFNLVYWSTYLFREEEDE 453 The following BLAST results are available for this feature:
BLAST of glutamate-gated chloride channel vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 25
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BLAST of glutamate-gated chloride channel vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of glutamate-gated chloride channel vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold807_size94382:67718..81514+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold807_size94382-snap-gene-0.18 ID=maker-scaffold807_size94382-snap-gene-0.18|Name=glutamate-gated chloride channel|organism=Tigriopus kingsejongensis|type=gene|length=13797bp|location=Sequence derived from alignment at scaffold807_size94382:67718..81514+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'glutamate-gated chloride channel' has the following synonyms
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