glutamate-gated chloride channel, maker-scaffold807_size94382-snap-gene-0.18 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of glutamate-gated chloride channel vs. L. salmonis genes
Match: EMLSAG00000003120 (supercontig:LSalAtl2s:LSalAtl2s1753:14457:18648:1 gene:EMLSAG00000003120 transcript:EMLSAT00000003120 description:"maker-LSalAtl2s1753-augustus-gene-0.11") HSP 1 Score: 142.51 bits (358), Expect = 1.129e-37 Identity = 73/201 (36.32%), Postives = 116/201 (57.71%), Query Frame = 0 Query: 6 KVWMPDTFFRNEKEGRFHNILVPNVYIRIFPNGDVLYSIRVSLTLACPMNLKLYPLDRQQCSLRVASYGWTTGDLQYIWKTTE-PVQIVKDLHLPRFTLEKYISD----YCNIKTNTG--EYSCLTVDLTFKREFSYYLLTIYVPCCMLVIVSWVSFWLDPNAVPARVSLGVTTLLTMSTQTASINNSLPPVAYTKAIDVW 199 K+W PDT+F N K+ + H I VPN ++RI P+G V +S R+++ C M LK +P D Q+C L + SYG+T ++ Y WK + + + +F L K+IS N K G S +++ +FKR++ ++LL IY P ++V+ SWV+FW+ P+RVSLGV + L++ T+ P V Y A+D++ Sbjct: 564 KIWKPDTYFINGKKSKMHKITVPNRFLRISPDGLVSFSQRLTIHAQCLMELKKFPFDSQECPLHIGSYGYTADEVLYDWKDNALEISTLAKATMTQFNLMKWISQAETSITNRKIAAGFRNDSIASINFSFKRQYGFFLLQIYTPMFIIVMCSWVAFWIVKTDAPSRVSLGVASSLSV-TKIGFAGKGKPNVEYPTALDIF 763
BLAST of glutamate-gated chloride channel vs. L. salmonis genes
Match: EMLSAG00000006968 (supercontig:LSalAtl2s:LSalAtl2s396:160743:177530:1 gene:EMLSAG00000006968 transcript:EMLSAT00000006968 description:"maker-LSalAtl2s396-augustus-gene-1.5") HSP 1 Score: 137.887 bits (346), Expect = 2.709e-37 Identity = 71/197 (36.04%), Postives = 105/197 (53.30%), Query Frame = 0 Query: 5 RKVWMPDTFFRNEKEGRFHNILVPNVYIRIFPNGDVLYSIRVSLTLACPMNLKLYPLDRQQCSLRVASYGWTTGDLQYIWK-TTEPVQIVKDLHLPRFTLEKYISDYCNIKTNT---------GEYSCLTVDLTFKREFSYYLLTIYVPCCMLVIVSWVSFWLDPNAVPARVSLGVTTLLTMSTQTASINNSLPPVA 191 K+W PDT+F N H I PN +RI +GD+ YS+R+++ CPM LK +P+D Q C L + SY +T + Y W+ ++ V L L +F + N NT G +S L V + +R Y+L+ IY+PC ++V++SWV FWL+ A RV LG+TT+LT+ST LP + Sbjct: 39 EKIWKPDTYFHNGLSSYIHTITRPNKLLRISEHGDITYSMRLTIKAKCPMMLKSFPMDWQSCPLVLGSYAYTIDQVYYRWQHSSNAVAYEGKLKLSQFDIITTAYRSLNFSRNTDDRYTLPLVGGFSVLQVVIALQRHTGYFLIQIYLPCTLIVVLSWVGFWLNREATSDRVGLGITTVLTLSTIALDSRTDLPKMG 235
BLAST of glutamate-gated chloride channel vs. L. salmonis genes
Match: EMLSAG00000004092 (supercontig:LSalAtl2s:LSalAtl2s217:422807:437258:1 gene:EMLSAG00000004092 transcript:EMLSAT00000004092 description:"augustus_masked-LSalAtl2s217-processed-gene-4.1") HSP 1 Score: 135.961 bits (341), Expect = 4.859e-36 Identity = 76/202 (37.62%), Postives = 109/202 (53.96%), Query Frame = 0 Query: 6 KVWMPDTFFRNEKEGRFHNILVPNVYIRIFPNGDVLYSIRVSLTLACPMNLKLYPLDRQQCSLRVASYGWTTGDLQYIWKTTEPVQIVKDLHLPRFTLEKY-ISDYCNIKTNTG---EYSCLTVDLTFKREFSYYLLTIYVPCCMLVIVSWVSFWL----DPNAVPARVSLGVTTLLTMSTQTASINNSLPPVAYTKAIDVW 199 K+W PDTF N K H + VPN +IRI P+G + YS R+++ C M+L+ +PLD Q C L + S+G ++ Y W T+ P+ + K L L ++ L + S + N G S + + TF+R YYLL IY+P ++V SWV+FWL +PAR SLG T L + T S P V Y A+DV+ Sbjct: 157 KIWRPDTFIINGKNSYLHKMTVPNRFIRISPDGRISYSQRLTVKARCEMDLRKFPLDSQHCPLEIGSFGHGVDEILYNW-TSMPLSMDKKLGLAQYHLISWNNSAFTRYSRNAGGDQNVSVIALHFTFQRRTGYYLLQIYIPLTLIVCCSWVTFWLIKTEKGGEIPARTSLGGTXXLAIVT-IGFGGKSKPRVGYATALDVF 356
BLAST of glutamate-gated chloride channel vs. L. salmonis genes
Match: EMLSAG00000004091 (supercontig:LSalAtl2s:LSalAtl2s217:408116:410199:1 gene:EMLSAG00000004091 transcript:EMLSAT00000004091 description:"maker-LSalAtl2s217-augustus-gene-4.34") HSP 1 Score: 132.88 bits (333), Expect = 5.171e-35 Identity = 78/206 (37.86%), Postives = 109/206 (52.91%), Query Frame = 0 Query: 6 KVWMPDTFFRNEKEGRFHNILVPNVYIRIFPNGDVLYSIRVSLTLACPMNLKLYPLDRQQCSLRVASYGWTTGDLQYIWKTTEPVQIVKDLHLPRFTLEKYISDYCNIK-----TNTGEY---SCLTVDLTFKREFSYYLLTIYVPCCMLVIVSWVSFWL----DPNAVPARVSLGVTTLLTMSTQTASINNSLPPVAYTKAIDVW 199 K+W+PDTF N K+ H I VPN ++R+ P G V YS R+++ C MNLK +P D Q C L++ S+G + DL Y WK + V K L L +F L Y S Y I+ T G Y S ++ F+R+ Y+LL IY P ++V SWV+FWL PAR LG ++L++ P V Y A+DV+ Sbjct: 149 KIWVPDTFIINGKKSFLHKITVPNRFVRVSPTGKVSYSQRLTILANCIMNLKKFPFDTQICPLKLGSFGHSNKDLIYQWKKPKAVSFNK-LGLAQFHLINY-SSYNIIEPSLRLTEKGNYRNDSSSVMEFVFERQSGYFLLQIYTPLTLIVFCSWVAFWLVKTEKGGEXPARTXLGANSVLSI-VNIGFTGKDRPKVGYATALDVF 351
BLAST of glutamate-gated chloride channel vs. L. salmonis genes
Match: EMLSAG00000001321 (supercontig:LSalAtl2s:LSalAtl2s1223:193582:196888:1 gene:EMLSAG00000001321 transcript:EMLSAT00000001321 description:"snap_masked-LSalAtl2s1223-processed-gene-2.46") HSP 1 Score: 128.257 bits (321), Expect = 1.846e-34 Identity = 93/357 (26.05%), Postives = 159/357 (44.54%), Query Frame = 0 Query: 2 TDARKVWMPDTFFRNEKEGRFHNILVPNVYIRIFPNGDVLYSIRVSLTLACPMNLKLYPLDRQQCSLRVASYGWTTGDLQYIWKTTEPVQIVKDLHLPRFTLEKYISDYCNIKTNTG-EYSCLTVDLTFKREFSYYLLTIYVPCCMLVIVSWVSFWLDPNAVPARVSLGVTTLLTMSTQTASINNSLPPVAYTKAIDVWTGVSNEGSSHRPKFRRYQGNRKAKALQDGTTIVCVTFVFSALLE------LQWRTGAISLFFSNVILTRIAFAFQPMMRRPVDSSAMMMSK---LHQCEIHMKSKKRRNFLQNWLNKFPSR---------AKKIDVISRVVFPAIFAIFNLSYWCYYL 339 T W PD++F + K I+ P +R+ P+ + Y+ + +TL CPM+ YP+D Q C L + S+G+ + Y W P Q+ KD+ + +E I+DY + G +S L + + KR +++ Y+P + V ++W+SF + + VP R+ L VTTLLT+ + S+ + P V+Y KA+D+W VC+ FVFS+L E L R+G +++ R + S +++ L M + ++N+ +N S+ A I+ I ++++P F FN +YW YYL Sbjct: 29 TSISDFWTPDSYFHHVKASNEVKIMTPVASLRVRPDKIIQYTKIILVTLGCPMSFYNYPMDNQICRLELQSFGYDMNLINYTW--MRPPQMKKDIIIDNHDVE--IADYTFEYSPEGIRFSGLGIRIELKRHLGFHITQSYIPSIIFVAIAWMSFHVPSDVVPGRMVLSVTTLLTLISMFNSVRSLTPQVSYMKALDLW------------------------------VFVCLVFVFSSLAEYGFVLYLTSRSGWQKKVDADI--------------RTISGSDRLVNPANFLRLISGGMIQRTQKNYSTANMNGVVSKVMPKTKERVAYSIEYIIKIIYPLAFFGFNYTYWTYYL 337
BLAST of glutamate-gated chloride channel vs. L. salmonis genes
Match: EMLSAG00000009827 (supercontig:LSalAtl2s:LSalAtl2s639:754218:772660:1 gene:EMLSAG00000009827 transcript:EMLSAT00000009827 description:"maker-LSalAtl2s639-augustus-gene-6.12") HSP 1 Score: 112.849 bits (281), Expect = 1.004e-29 Identity = 82/258 (31.78%), Postives = 117/258 (45.35%), Query Frame = 0 Query: 98 LPRFTLEKYISDYCNIKTNTGEYSCLTVDLTFKREFSYYLLTIYVPCCMLVIVSWVSFWLDPNAVPARVSLGVTTLLTMSTQTASINNSLPPVAYTKAIDVWTGVSNEGSSHRPKFRRYQGNRKAKALQDGTTIVCVTFVFSALLELQ-----WRTGAISLFFSNVILTRIAFAFQPMMRRPVDSSAMMMSKLHQCEIHMKSKKRRN----FLQNWLNKFPSRAK-------KIDVISRVVFPAIFAIFNLSYWCYYL 339 +P+FT+E+ +D C + G YSCL R ++++ YVP ++V++SWVSFW+D ++VP R +LGVTTLLT+S+++A +N P V+Y KAIDVW G C F+F+AL+E WR I+ S F Q + + S IH S N F +N P + KID R++FP F IFN+ YW YYL Sbjct: 1 MPQFTVEQVETDNCEESSLIGNYSCLVAKFHLSRSLGFHMVQSYVPTILIVVISWVSFWMDVDSVPGRTTLGVTTLLTVSSKSAGLNAETPQVSYVKAIDVWMG------------------------------ACTAFIFAALIEFTIINYLWRRTKINYSVSTAF---DGFDLQNLEKNEFPQSNGENQSEQTSNIHPPSTVASNRNIIFEKNISYGRPDKGYTSARIGVKIDESCRILFPLNFLIFNIFYWTYYL 225
BLAST of glutamate-gated chloride channel vs. L. salmonis genes
Match: EMLSAG00000009137 (supercontig:LSalAtl2s:LSalAtl2s575:53505:62115:1 gene:EMLSAG00000009137 transcript:EMLSAT00000009137 description:"maker-LSalAtl2s575-augustus-gene-0.8") HSP 1 Score: 103.605 bits (257), Expect = 1.416e-24 Identity = 53/191 (27.75%), Postives = 100/191 (52.36%), Query Frame = 0 Query: 5 RKVWMPDTFFRNEKEGRFHNILVPNVYIRIFPNGDVLYSIRVSLTLACPMNLKLYPLDRQQCSLRVASYGWTTGDLQYIWKTTEPVQIVKDLHLPRFTLEKYISDYCNIKTNTGEYSCLTVDLTFKREFSYYLLTIYVPCCMLVIVSWVSFWLDPNAVPARVSLGVTTLLTMSTQTASINNSLPPVAYTKA 195 RK W+PD F K R + + +R + N ++ S+R++ + C M+ YP D Q C + + S+ + D++ W + V I ++ L +F+ Y Y + +++ YS L + + +R Y+++ ++P + VI+ W+S +LDP A+P RV + + +LLT S+ +S P V+Y+ Sbjct: 106 RKFWIPDVFIDGAKNARIPKYHLQPMSLRYYKNRNLRLSLRINFDVICQMDFHKYPNDEQLCDIPLESWDTSMDDMKLNWDLSNSV-INPNITLDQFSPLIYFKKY-DTQSDMTSYSGLIIRIQLQRLIPYHVIQTFIPSIVFVILGWISLFLDPQAIPGRVKMVMLSLLTSLAMFNSVRDSTPQVSYSGG 294
BLAST of glutamate-gated chloride channel vs. L. salmonis genes
Match: EMLSAG00000011250 (supercontig:LSalAtl2s:LSalAtl2s76:68800:74845:-1 gene:EMLSAG00000011250 transcript:EMLSAT00000011250 description:"maker-LSalAtl2s76-augustus-gene-0.8") HSP 1 Score: 98.9821 bits (245), Expect = 7.559e-24 Identity = 60/247 (24.29%), Postives = 109/247 (44.13%), Query Frame = 0 Query: 4 ARKVWMPDTFFRNEKEGRFHNILVPNVYIRIFPNGDVLYSIRVSLTLACPMNLKLYPLDRQQCSLRVASYGWTTGDLQYIWKTTEPVQIVKDLHLPRFTLEKYIS--DYCNIKTNTGEYSCLTVDLTFK----REFSYYLLTIYVPCCMLVIVSWVSFWLDPNAVPARVSLGVTTLLTMSTQTASINNSLPPVAYTKAIDVWTGVSNEGSSHRPKFRRYQGNRKAKALQDGTTIVCVTFVFSALLEL 244 A W+PD F K R V +R++ + V YS R++ +AC M+ +P+D Q C ++ S+G+TT L + WK I +++ L +F + K ++ + +I + + + V L K RE Y+++ Y+P + V V+W+S ++ P ++PA ++ N++P V+Y +D+W + C+ FVFS +LE Sbjct: 111 AEYFWIPDIFIDKSKAVRVPTYFVKPASLRVYNDSTVRYSSRLNFDVACEMDFHRFPVDEQLCEIKFESFGFTTEQLMFSWKKGSS-NINQNISLAQFDMNKSLNCLYFTHIYNTSHPFMSIFVGLIMKIHLRREIGYHIVQTYIPSMIFVFVAWLSLFISPESIPAMF--------------GAVRNNVPKVSYVSYLDIW------------------------------MVACIFFVFSCILEF 312
BLAST of glutamate-gated chloride channel vs. L. salmonis genes
Match: EMLSAG00000003314 (supercontig:LSalAtl2s:LSalAtl2s181:427820:487404:-1 gene:EMLSAG00000003314 transcript:EMLSAT00000003314 description:"augustus_masked-LSalAtl2s181-processed-gene-4.3") HSP 1 Score: 98.5969 bits (244), Expect = 3.249e-23 Identity = 70/245 (28.57%), Postives = 112/245 (45.71%), Query Frame = 0 Query: 5 RKVWMPDTFFRNEKEGRFHNILVPNVYIRIFPNGDVLYSIRVSLTLACPMNLKLYPLDRQQCSLRVASYGWTTGDLQYIWKTTEPVQIVKDLHLPRFTLEKYI------SDYCNIKTNTGEYSCLTVDLTFKREFSYYLLTIYVPCCMLVIVSWVSFWLDPNAVPARVSLGVTTLLTMSTQTASINNSLPPVAYTKAIDVWTGVSNEGSSHRPKFRRYQGNRKAKALQDGTTIVCVTFVFSALLE 243 ++ W+PD N KE + ++L + + N +++Y++ +T CPM +PLD Q C +V S+ + I K + + D R L+ +I +Y + TG YS +LT +R+ S+Y++T Y+P M VIVSW+SF + P+ VP R++L VT L + +I ++P AI+ W IVCV FVF AL+E Sbjct: 150 KEFWLPDAEILNLKEFKTLDVLSKLEGLWLNRNFEIMYAVATRITFICPMTFNSFPLDVQVCRFQVGSFNYD------ISKMVFHDEFIADQSQIRSVLDYFIEIRKLPDEYQHYVALTGNYSVAGFELTLQRKVSHYIITYYLPSGMFVIVSWISFLVPPDIVPGRMTLLVTVFLVLVNIFNTITTNIPKAEGLTAIEAW------------------------------VIVCVLFVFGALIE 358
BLAST of glutamate-gated chloride channel vs. L. salmonis genes
Match: EMLSAG00000003313 (supercontig:LSalAtl2s:LSalAtl2s181:399664:401012:-1 gene:EMLSAG00000003313 transcript:EMLSAT00000003313 description:"maker-LSalAtl2s181-augustus-gene-4.10") HSP 1 Score: 97.8265 bits (242), Expect = 5.893e-23 Identity = 88/342 (25.73%), Postives = 140/342 (40.94%), Query Frame = 0 Query: 5 RKVWMPDTFFRNEKEGRFHNILVPNVYIRIFPNGDVLYSIRVSLTLACPMNLKLYPLDRQQCSLRVASYGWTTGDL----QYIWKTTEPVQIVKDLHLPRFTLEKYISDYCNIKTNTGEYSCLTVDLTFKREFSYYLLTIYVPCCMLVIVSWVSFWLDPNAVPARVSLGVTTLLTMSTQTASINNSLPPVAYTKAIDVWTGVSNEGSSHRPKFRRYQGNRKAKALQDGTTIVCVTFVFSALLELQWRTGAISLFFSNVILTRIAFAFQPMMRRPVDSSAMMMSKLHQCEIHMKSKKRRNFLQNWL----NKFPSRAKK---IDVISRVVFPAIFAIFNLSYW 335 K+W+ D N ++L + I N +++YS+ +T+ C M +P+D Q C +V S+ + + +I Q D + L + Y + N YS + R+ S+Y++T Y+P + V+VSW+SF ++P +P R++L VT L + +I + P AI+ W I C+ FVF AL E VIL +I +R V + + + +Q ++H K K+ LQN L N FP + K D+I VFP +F IFNL YW Sbjct: 118 EKLWLXDVEILNLSSFETLSVLSKLEGVWIGENSELMYSLATRITIICRMKFNAFPMDIQVCKFQVGSFNYDMNKMIFFNDFIPSKQNSQQTTLDYQVNFQDLRPDETHYLALGMN---YSVAGFQIILTRKVSFYIVTYYLPSALFVLVSWISFLVNPEVIPGRMTLLVTIFLVLINIFNTIQTNSPKADGLTAIEAW------------------------------VIACIIFVFGALGEY------------TVILLKIKIKKIYPKKRKVIVLSQIPNTKNQQQVHNKKVKKAIKLQNSLWSNSNVFPKKIDKYAHTDLIFLAVFPILFLIFNLFYW 414
BLAST of glutamate-gated chloride channel vs. SwissProt
Match: gi|62901525|sp|Q94900.2|GLUCL_DROME (RecName: Full=Glutamate-gated chloride channel; Short=DrosGluCl; Flags: Precursor) HSP 1 Score: 434.491 bits (1116), Expect = 1.559e-150 Identity = 221/377 (58.62%), Postives = 264/377 (70.03%), Query Frame = 0 Query: 1 MTDARKVWMPDTFFRNEKEGRFHNILVPNVYIRIFPNGDVLYSIRVSLTLACPMNLKLYPLDRQQCSLRVASYGWTTGDLQYIWKTTEPVQIVKDLHLPRFTLEKYISDYCNIKTNTGEYSCLTVDLTFKREFSYYLLTIYVPCCMLVIVSWVSFWLDPNAVPARVSLGVTTLLTMSTQTASINNSLPPVAYTKAIDVWTGVSNEGSSHRPKFRRYQGNRKAKALQDGTTIVCVTFVFSALLELQW-----RTGA-------------------ISLFFSNVIL---TRIAFAFQPMMRRPVDSSAMMMSKLHQCEIHMKSKKRRNFLQNWLNKFP----SRAKKIDVISRVVFPAIFAIFNLSYWCYYLLQEAQSE 346 +T+A +VWMPD FF NEKEG FHNI++PNVYIRIFPNG VLYSIR+SLTLACPMNLKLYPLDRQ CSLR+ASYGWTT DL ++WK +PVQ+VK+LHLPRFTLEK+++DYCN KTNTGEYSCL VDL FKREFSYYL+ IY+PCCMLVIVSWVSFWLD AVPARVSLGVTTLLTM+TQT+ IN SLPPV+YTKAIDVWTG VC+TFVF ALLE R+G+ SL ++ +L + FA +P++R P D A + K QCE+HM++ KR N + WL+KFP SR+K+IDVISR+ FP +FA+FNL YW YL +E + E Sbjct: 112 LTEANRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEGDPVQVVKNLHLPRFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTG------------------------------VCLTFVFGALLEFALVNYASRSGSNKANMHKESMKKKRRDLEQASLDAASDLLDTDSNATFAMKPLVRHPGDPLA--LEKRLQCEVHMQAPKRPNCCKTWLSKFPTRQCSRSKRIDVISRITFPLVFALFNLVYWSTYLFREEEDE 456
BLAST of glutamate-gated chloride channel vs. SwissProt
Match: gi|704000349|sp|G5EBR3.1|GLUCL_CAEEL (RecName: Full=Glutamate-gated chloride channel alpha; AltName: Full=Avermectin-sensitive glutamate-gated chloride channel GluCl alpha; AltName: Full=GluCl alpha; Flags: Precursor) HSP 1 Score: 268.855 bits (686), Expect = 1.381e-85 Identity = 147/355 (41.41%), Postives = 201/355 (56.62%), Query Frame = 0 Query: 1 MTDARKVWMPDTFFRNEKEGRFHNILVPNVYIRIFPNGDVLYSIRVSLTLACPMNLKLYPLDRQQCSLRVASYGWTTGDLQYIWKTTEPVQIVKDLH--LPRFTLEKYISDYCNIKTNTGEYSCLTVDLTFKREFSYYLLTIYVPCCMLVIVSWVSFWLDPNAVPARVSLGVTTLLTMSTQTASINNSLPPVAYTKAIDVWTGVSNEGSSHRPKFRRYQGNRKAKALQDGTTIVCVTFVFSALLELQWRTGAISLFFSNVILTRIAFAFQPMMRRPVDSSAMMMSKLHQ---CEIHMKSKKRRNF------LQNWLNKFPSR------AKKIDVISRVVFPAIFAIFNLSYWCYY 338 +T ++WMPDTFF NEK+ H I PNV IRI +G VLYS+R+SL L+CPM L+ YP+D QQCS+ +ASY +TT D++Y+WK P+Q+ L LP F L + YC TNTG YSCL + KREFS+YLL +Y+P CMLVIVSWVSFW D A+PARV+LGVTTLLTM+ Q+A IN+ LPPV+Y KAIDVW G C+TF+F ALLE N I + + R + ++ LH ++ + +K R + ++LN ++ +K++D+ISR +FP +F +FN+ YW + Sbjct: 140 LTVGHQIWMPDTFFPNEKQAYKHTIDKPNVLIRIHNDGTVLYSVRISLVLSCPMYLQYYPMDVQQCSIDLASYAYTTKDIEYLWKEHSPLQLKVGLSSSLPSFQLTNTSTTYCTSVTNTGIYSCLRTTIQLKREFSFYLLQLYIPSCMLVIVSWVSFWFDRTAIPARVTLGVTTLLTMTAQSAGINSQLPPVSYIKAIDVWIG------------------------------ACMTFIFCALLEFA---------LVNHIANKQGVERKARTERE-KAEIPLLQNLHNDVPTKVFNQEEKVRTVPLNRRQMNSFLNLLETKTEWNDISKRVDLISRALFPVLFFVFNILYWSRF 454
BLAST of glutamate-gated chloride channel vs. SwissProt
Match: gi|121580|sp|P24524.1|GLRA3_RAT (RecName: Full=Glycine receptor subunit alpha-3; Flags: Precursor) HSP 1 Score: 233.417 bits (594), Expect = 7.837e-72 Identity = 131/347 (37.75%), Postives = 188/347 (54.18%), Query Frame = 0 Query: 7 VWMPDTFFRNEKEGRFHNILVPNVYIRIFPNGDVLYSIRVSLTLACPMNLKLYPLDRQQCSLRVASYGWTTGDLQYIWKTTEPVQIVKDLHLPRFTL-EKYISDYCNIKTNTGEYSCLTVDLTFKREFSYYLLTIYVPCCMLVIVSWVSFWLDPNAVPARVSLGVTTLLTMSTQTASINNSLPPVAYTKAIDVWTGVS--------------NEGSSHRPKFRRYQGNRKAKALQDGTTIVCVTFVFSALLELQWRTGAISLFFSNVILTRIAFAFQPMMRRPVDSSAMMMSKLHQCEIHMKSKKRRNFLQNWLNKFPSRAKKIDVISRVVFPAIFAIFNLSYWCYY 338 +W PD FF NEK FH + N +RIF NG+VLYSIR++LTL+CPM+LK +P+D Q C +++ S+G+T DL + W+ PVQ+ + L LP+F L E+ YC NTG+++C+ V +R+ YYL+ +Y+P ++VI+SWVSFW++ +A PARV+LG+TT+LTM+TQ++ SLP V+Y KAID+W V N S + R++ RK K T F+ LE +R L+ A+ P ++ + H ++ KS F RAKKID ISR FP F IFN+ YW Y Sbjct: 126 IWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSRQHKELLRFRRKRKNK-----------TEAFA--LEKFYRFSDTDDEVRESRLSFTAYGMGPCLQ--AKDGVVPKGPNHAVQVMPKSADEMR------KVFIDRAKKIDTISRACFPLAFLIFNIFYWVIY 451
BLAST of glutamate-gated chloride channel vs. SwissProt
Match: gi|116242496|sp|O75311.2|GLRA3_HUMAN (RecName: Full=Glycine receptor subunit alpha-3; Flags: Precursor) HSP 1 Score: 233.417 bits (594), Expect = 7.921e-72 Identity = 137/357 (38.38%), Postives = 194/357 (54.34%), Query Frame = 0 Query: 7 VWMPDTFFRNEKEGRFHNILVPNVYIRIFPNGDVLYSIRVSLTLACPMNLKLYPLDRQQCSLRVASYGWTTGDLQYIWKTTEPVQIVKDLHLPRFTL-EKYISDYCNIKTNTGEYSCLTVDLTFKREFSYYLLTIYVPCCMLVIVSWVSFWLDPNAVPARVSLGVTTLLTMSTQTASINNSLPPVAYTKAIDVWTGVSNEGSSHRPKFRRYQGNRKAKALQDGTTIVCVTFVFSALLELQWRTGAISLFFSNVILTR-------IAFAFQPMMR-RPVDS---------SAMMMSKLHQCEIHMKSKKRRNFLQ------NWLNK-FPSRAKKIDVISRVVFPAIFAIFNLSYWCYY 338 +W PD FF NEK FH + N +RIF NG+VLYSIR++LTL+CPM+LK +P+D Q C +++ S+G+T DL + W+ PVQ+ + L LP+F L E+ YC NTG+++C+ V +R+ YYL+ +Y+P ++VI+SWVSFW++ +A PARV+LG+TT+LTM+TQ++ SLP V+Y KAID+W VC+ FVFSALLE +S ++ R AFA + R +D +A M Q + M K + +Q + + K F RAKKID ISR FP F IFN+ YW Y Sbjct: 126 IWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMA------------------------------VCLLFVFSALLEYA-AVNFVSRQHKELLRFRRKRKNKTEAFALEKFYRFSDMDDEVRESRFSFTAYGMGPCLQAKDGMTPKGPNHPVQVMPKSPDEMRKVFIDRAKKIDTISRACFPLAFLIFNIFYWVIY 451
BLAST of glutamate-gated chloride channel vs. SwissProt
Match: gi|6647527|sp|O93430.1|GLRA1_DANRE (RecName: Full=Glycine receptor subunit alphaZ1; Flags: Precursor) HSP 1 Score: 231.106 bits (588), Expect = 3.696e-71 Identity = 128/347 (36.89%), Postives = 183/347 (52.74%), Query Frame = 0 Query: 7 VWMPDTFFRNEKEGRFHNILVPNVYIRIFPNGDVLYSIRVSLTLACPMNLKLYPLDRQQCSLRVASYGWTTGDLQYIWKTTEPVQIVKDLHLPRFTL-EKYISDYCNIKTNTGEYSCLTVDLTFKREFSYYLLTIYVPCCMLVIVSWVSFWLDPNAVPARVSLGVTTLLTMSTQTASINNSLPPVAYTKAIDVWTGVSNEGSSHRPKFRRYQGNRKAKALQDGTTIVCVTFVFSALLE--------------LQWRTGAISLFFSNVILTRIAFAFQPMMRRPVDSSAMMMSKLHQCEIHMKSKKRRNFLQNWLNKFPSRAKKIDVISRVVFPAIFAIFNLSYWCYY 338 +W PD FF NEK FH + N +RI NG+VLYSIR++L LACPM+LK +P+D Q C +++ S+G+T DL + W VQ+ L LP+F L E+ YC NTG+++C+ +R+ YYL+ +Y+P ++VI+SWVSFW++ +A PARV LG+TT+LTM+TQ++ SLP V+Y KAID+W VC+ FVFSALLE L+++ L R +FA M + + M K + + ++ F SRAK+ID +SRV FP +F IFN+ YW Y Sbjct: 117 IWKPDLFFANEKGANFHEVTTDNKLLRISKNGNVLYSIRITLVLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWDEKGAVQVADGLTLPQFILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMA------------------------------VCLLFVFSALLEYAAVNFIARQHKELLRFQRRRRHLKEDEAGDGRFSFAAYGMGPACLQAKDGMAIKGNNNNAPTSTNPPEKTVEEMRKLFISRAKRIDTVSRVAFPLVFLIFNIFYWITY 433
BLAST of glutamate-gated chloride channel vs. SwissProt
Match: gi|66774025|sp|Q91XP5.2|GLRA3_MOUSE (RecName: Full=Glycine receptor subunit alpha-3; Flags: Precursor) HSP 1 Score: 231.491 bits (589), Expect = 4.025e-71 Identity = 131/349 (37.54%), Postives = 191/349 (54.73%), Query Frame = 0 Query: 7 VWMPDTFFRNEKEGRFHNILVPNVYIRIFPNGDVLYSIRVSLTLACPMNLKLYPLDRQQCSLRVASYGWTTGDLQYIWKTTEPVQIVKDLHLPRFTL-EKYISDYCNIKTNTGEYSCLTVDLTFKREFSYYLLTIYVPCCMLVIVSWVSFWLDPNAVPARVSLGVTTLLTMSTQTASINNSLPPVAYTKAIDVWTGVS--------------NEGSSHRPKFRRYQGNRKAKALQDGTTIVCVTFVFSALLELQWRTGAISLFFSNVILTRIAFAFQPMMRRPVDSSAMMMSKLHQCEIHMKS--KKRRNFLQNWLNKFPSRAKKIDVISRVVFPAIFAIFNLSYWCYY 338 +W PD FF NEK FH + N +RIF NG+VLYSIR++LTL+CPM+LK +P+D Q C +++ S+G+T DL + W+ PVQ+ + L LP+F L E+ YC NTG+++C+ V +R+ YYL+ +Y+P ++VI+SWVSFW++ +A PARV+LG+TT+LTM+TQ++ SLP V+Y KAID+W V N S + R++ RK K T F+ LE +R + A+ P ++ + H ++ KS + R+ F+ RAKKID ISR FP F IFN+ YW Y Sbjct: 126 IWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSRQHKELLRFRRKRKNK-----------TEAFA--LEKFYRFSDTDDEVRESRFSFTAYGMGPCLQ--AKDGVVPKGPNHAVQVMPKSPDEMRKVFI--------DRAKKIDTISRACFPLAFLIFNIFYWVIY 451
BLAST of glutamate-gated chloride channel vs. SwissProt
Match: gi|66774003|sp|Q7TNC8.1|GLRA2_MOUSE (RecName: Full=Glycine receptor subunit alpha-2; Flags: Precursor) HSP 1 Score: 226.098 bits (575), Expect = 3.726e-69 Identity = 129/354 (36.44%), Postives = 187/354 (52.82%), Query Frame = 0 Query: 7 VWMPDTFFRNEKEGRFHNILVPNVYIRIFPNGDVLYSIRVSLTLACPMNLKLYPLDRQQCSLRVASYGWTTGDLQYIWKTTEPVQIVKDLHLPRFTL-EKYISDYCNIKTNTGEYSCLTVDLTFKREFSYYLLTIYVPCCMLVIVSWVSFWLDPNAVPARVSLGVTTLLTMSTQTASINNSLPPVAYTKAIDVWTGVSNEGSSHRPKFRRYQGNRKAKALQDGTTIVCVTFVFSALLEL-----------QWRTGAISLFFSN-----VILTRIAFAFQPM-----MRRPVDSSAMMMSKLHQCEIHMKSKKRRNFLQNWLNKFPSRAKKIDVISRVVFPAIFAIFNLSYWCYY 338 +W PD FF NEK FH++ N +RI NG VLYSIR++LTL+CPM+LK +P+D Q C++++ S+G+T DL + W + PVQ+ + L LP+F L E+ YC NTG+++C+ V +R+ YYL+ +Y+P ++VI+SWVSFW++ +A PARV+LG+TT+LTM+TQ++ SLP V+Y KAID+W VC+ FVF+ALLE ++ N +R F+ M M+ A + L Q + K++ F RAK+ID ISR FP F IFN+ YW Y Sbjct: 127 IWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMA------------------------------VCLLFVFAALLEYAAVNFVSRQHKEFLRLRRRQKRQNKEEDVTRESRFNFSGYGMGHCLQMKDGTAVKATPANPLPQPPKDADAIKKK---------FVDRAKRIDTISRAAFPLAFLIFNIFYWITY 441
BLAST of glutamate-gated chloride channel vs. SwissProt
Match: gi|78099775|sp|Q61603.3|GLRA4_MOUSE (RecName: Full=Glycine receptor subunit alpha-4; Flags: Precursor) HSP 1 Score: 222.631 bits (566), Expect = 1.118e-67 Identity = 128/353 (36.26%), Postives = 187/353 (52.97%), Query Frame = 0 Query: 7 VWMPDTFFRNEKEGRFHNILVPNVYIRIFPNGDVLYSIRVSLTLACPMNLKLYPLDRQQCSLRVASYGWTTGDLQYIWKTTEP-VQIVKDLHLPRFTL--EKYISDYCNIKTNTGEYSCLTVDLTFKREFSYYLLTIYVPCCMLVIVSWVSFWLDPNAVPARVSLGVTTLLTMSTQTASINNSLPPVAYTKAIDVWTGVSNEGSSHRPKFRRYQGNRKAKALQDGTTIVCVTFVFSALLE--------------LQWRTGAISLFFSNVILTRIAFAFQ----PMMRRPVDSSAMMMSKLHQCEIHMKSKKRRNFLQNWLNKFPSRAKKIDVISRVVFPAIFAIFNLSYWCYY 338 +W PD FF NEK FH + N +RIF NG+VLYSIR++L L+CPM+LK +P+D Q C++++ S+G+T DL + W P VQ+ + L LP+F L EK + YC NTG+++C+ V +R+ YYL+ +Y+P ++VI+SWVSFW++ +A PARV LG+TT+LTM+TQ++ SLP V+Y KAID+W VC+ FVF+ALLE ++ R I+ F F+ + D M S ++ + K ++ + RAK+ID ISR VFP F +FN+ YW Y Sbjct: 126 IWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLMFEWLEDAPAVQVAEGLTLPQFILRDEKDLG-YCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMA------------------------------VCLLFVFAALLEYAAVNFVSRQHKEFMRLRRRQRRQRMEEDIIRESRFYFRGYGLGHCLQARDGGPMEGSSIYSPQPPTPLLKEGETMRKL---YVDRAKRIDTISRAVFPFTFLVFNIFYWVVY 444
BLAST of glutamate-gated chloride channel vs. SwissProt
Match: gi|74962112|sp|Q17328.1|GLUCB_CAEEL (RecName: Full=Glutamate-gated chloride channel subunit beta; Short=Glu-Cl subunit beta; AltName: Full=Avermectin-sensitive glutamate-gated chloride channel subunit; Flags: Precursor) HSP 1 Score: 218.009 bits (554), Expect = 3.967e-66 Identity = 134/348 (38.51%), Postives = 192/348 (55.17%), Query Frame = 0 Query: 5 RKVWMPDTFFRNEKEGRFHNILVPNVYIRIFPNGDVLYSIRVSLTLACPMNLKLYPLDRQQCSLRVASYGWTTGDLQYIWKTTEPVQIVKDL--HLPRFTLEKYISDY-CNIKTNTGEYSCLTVDLTFKREFSYYLLTIYVPCCMLVIVSWVSFWLDPNAVPARVSLGVTTLLTMSTQTASINNSLPPVAYTKAIDVWTGVSNEGSSHRPKFRRYQGNRKAKALQDGTTIVCVTFVFSALLELQWRTGAISLFFSNVILTRIAFAFQPMMRRPVDSSAMMMSKLHQ--CEIHMKSKKR--RNFLQNWLNKFPSRAKKIDVISRVVFPAIFAIFNLSYWCYYLLQEAQS 345 + +W+PDTFF EK H I + N+++RI+P+G +LYS R+SLT +CPM L+LYPLD Q C+ + SY T D+ Y W + PVQ+ + LP F L+ Y ++ C TNTG Y CL + L FKR+FSYYL+ +Y P M+VIVSWVSFW+D ++ RV+LGVTTLLTM+T ++IN LPPV+Y K +DVW G C TFVF ALLE + + S+ ++ +R A + RR + M+ ++++Q C H + R+ ++ + K KID +R V P F FN+ YW L+ A + Sbjct: 114 KSLWIPDTFFPTEKAAHRHLIDMENMFLRIYPDGKILYSSRISLTSSCPMRLQLYPLDYQSCNFDLVSYAHTMNDIMYEWDPSTPVQLKPGVGSDLPNFILKNYTTNADCTSHTNTGSYGCLRMQLLFKRQFSYYLVQLYAPTTMIVIVSWVSFWIDLHSTAGRVALGVTTLLTMTTMQSAINAKLPPVSYVKVVDVWLG------------------------------ACQTFVFGALLEYAFVSYQDSVRQND--RSREKAARKAQRRR--EKLEMVDAEVYQPPCTCHTFEARETFRDKVRRYFTKPDYLPAKIDFYARFVVPLAFLAFNVIYWVSCLIMSANA 427
BLAST of glutamate-gated chloride channel vs. SwissProt
Match: gi|121579|sp|P22771.1|GLRA2_RAT (RecName: Full=Glycine receptor subunit alpha-2; AltName: Full=Glycine receptor strychnine-binding subunit; Flags: Precursor) HSP 1 Score: 216.853 bits (551), Expect = 1.384e-65 Identity = 126/348 (36.21%), Postives = 184/348 (52.87%), Query Frame = 0 Query: 7 VWMPDTFFRNEKEGRFHNILVPNVYIRIFPNGDVLYSIRVSLTLACPMNLKLYPLDRQQCSLRVASYGWTTGDLQYIWKTTEPVQIVKDLHLPRFTL-EKYISDYCNIKTNTGEYSCLTVDLTFKREFSYYLLTIYVPCCMLVIVSWVSFWLDPNAVPARVSLGVTTLLTMSTQTASINNSLPPVAYTKAIDVWTGVSNEGSSHRPKFRRYQGNRKAKALQDGTTIVCVTFVFSALLE---LQWRTGAISLFFSNVILTRIAFAFQPMMRRP-VDSSAMMMSKLHQCEIHMKSKKRRNFLQNWLNKFPSRA-----------KKIDVISRVVFPAIFAIFNLSYWCYY 338 +W PD FF NEK FH++ N +RI NG VLYSIR++LTL+CPM+LK +P+D Q C++++ S+ +T DL + W + PVQ+ + L LP+F L E+ YC NTG+++C+ V +R+ YYL+ +Y+P ++VI+SWVSFW++ +A PARV+LG+TT+LTM+TQ++ SLP V+Y KAID+W VC+ FVF+ALLE + + + F + + + R + S M Q + K N L + P A K+ID ISR FP F IFN+ YW Y Sbjct: 127 IWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFEYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMA------------------------------VCLLFVFAALLEYAAVNFVSRQHKEFLRLRRRQKRQNKEEDVTRESRFNFSGYGMGHCLQVKDGTAVKATP---ANPLPQPPKDADAIKKKFVDRAKRIDTISRAAFPLAFLIFNIFYWITY 441
BLAST of glutamate-gated chloride channel vs. nr
Match: gi|1325313968|ref|XP_023338657.1| (LOW QUALITY PROTEIN: glutamate-gated chloride channel-like [Eurytemora affinis]) HSP 1 Score: 465.692 bits (1197), Expect = 2.298e-160 Identity = 239/348 (68.68%), Postives = 258/348 (74.14%), Query Frame = 0 Query: 1 MTDARKVWMPDTFFRNEKEGRFHNILVPNVYIRIFPNGDVLYSIRVSLTLACPMNLKLYPLDRQQCSLRVASYGWTTGDLQYIWKTTEPVQIVKDLHLPRFTLEKYISDYCNIKTNTGEYSCLTVDLTFKREFSYYLLTIYVPCCMLVIVSWVSFWLDPNAVPARVSLGVTTLLTMSTQTASINNSLPPVAYTKAIDVWTGVSNEGSSHRPKFRRYQGNRKAKALQDGTTIVCVTFVFSALLE--------------LQWRTGAISLFFSNVIL--------TRIAFAFQPMMRRPVDS----SAMMMSKLHQCEIHMKSKKRRNFLQNWLNKFPSRAKKIDVISRVV 322 MTDARKVWMPDTFFRNEKEGRFHNILVPNVYIRIFP+G VLYSIRVSLTLACPMNLKLYPLDRQ+CSLRVASYGWTT DL+Y WKT PVQIVKDLHLPRFTLEKY+SDYCNIKTNTGEYSCLTVDLTFKREFSYYLLTIYVPCCMLVIVSWVSFWLDPNAVPARVSLGVTTLLTMSTQ ASINNSLPPVAYTKAIDVWTG VC+ FVF ALLE ++ R + F +F +PMMRR D+ + ++ +HQCEIHMK +KR+NFL WLNKFPSRAKKIDV+SRV+ Sbjct: 117 MTDARKVWMPDTFFRNEKEGRFHNILVPNVYIRIFPDGYVLYSIRVSLTLACPMNLKLYPLDRQKCSLRVASYGWTTDDLRYQWKTDGPVQIVKDLHLPRFTLEKYVSDYCNIKTNTGEYSCLTVDLTFKREFSYYLLTIYVPCCMLVIVSWVSFWLDPNAVPARVSLGVTTLLTMSTQQASINNSLPPVAYTKAIDVWTG------------------------------VCIFFVFGALLEYALVNYASRSDANRIRKRNAKKKIEFDRAAFDAEHMEEHNGGSFPMKPMMRRSGDALIPGANFPINNIHQCEIHMKPRKRQNFLMAWLNKFPSRAKKIDVLSRVI 434
BLAST of glutamate-gated chloride channel vs. nr
Match: gi|807043641|ref|XP_012162081.1| (glutamate-gated chloride channel isoform X15 [Ceratitis capitata]) HSP 1 Score: 442.195 bits (1136), Expect = 4.305e-151 Identity = 220/368 (59.78%), Postives = 261/368 (70.92%), Query Frame = 0 Query: 1 MTDARKVWMPDTFFRNEKEGRFHNILVPNVYIRIFPNGDVLYSIRVSLTLACPMNLKLYPLDRQQCSLRVASYGWTTGDLQYIWKTTEPVQIVKDLHLPRFTLEKYISDYCNIKTNTGEYSCLTVDLTFKREFSYYLLTIYVPCCMLVIVSWVSFWLDPNAVPARVSLGVTTLLTMSTQTASINNSLPPVAYTKAIDVWTGVSNEGSSHRPKFRRYQGNRKAKALQDGTTIVCVTFVFSALLELQWRTGA-------------------ISLFFSNVIL---TRIAFAFQPMMRRPVDSSAMMMSKLHQCEIHMKSKKRRNFLQNWLNKFPSRAKKIDVISRVVFPAIFAIFNLSYWCYYLLQEAQSE 346 +T+A +VWMPD FF NEKEG FHNI++PNVYIRIFPNG VLYSIR+SLTLACPMNLKLYPLDRQ CSLR+ASYGWTT DL ++WK +PVQ+VK+LHLPRFTLEK+++DYCN KTNTGEYSCL VDL FKREFSYYL+ IY+PCCMLVIVSWVSFWLD AVPARVSLGVTTLLTM+TQT+ IN SLPPV+YTKAIDVWTG VC+TFVF ALLE A SL ++ +L + FA +P++R P D M + KL QCE+HM+ KR N + WL+KFP+R+K+IDVISR+ FP +FA+FNL YW YL +E + E Sbjct: 112 LTEANRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEGDPVQVVKNLHLPRFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTG------------------------------VCLTFVFGALLEFALVNYASRSDIHKENMKKKRRDLEQASLDAASDLLDTDSNATFAMKPLVRHPGD--PMALEKLRQCEVHMQPPKRPNCCKTWLSKFPTRSKRIDVISRITFPLVFALFNLVYWSTYLFREEEDE 447
BLAST of glutamate-gated chloride channel vs. nr
Match: gi|929359156|ref|XP_014088909.1| (PREDICTED: glutamate-gated chloride channel isoform X2 [Bactrocera oleae]) HSP 1 Score: 441.81 bits (1135), Expect = 4.859e-151 Identity = 220/368 (59.78%), Postives = 261/368 (70.92%), Query Frame = 0 Query: 1 MTDARKVWMPDTFFRNEKEGRFHNILVPNVYIRIFPNGDVLYSIRVSLTLACPMNLKLYPLDRQQCSLRVASYGWTTGDLQYIWKTTEPVQIVKDLHLPRFTLEKYISDYCNIKTNTGEYSCLTVDLTFKREFSYYLLTIYVPCCMLVIVSWVSFWLDPNAVPARVSLGVTTLLTMSTQTASINNSLPPVAYTKAIDVWTGVSNEGSSHRPKFRRYQGNRKAKALQDGTTIVCVTFVFSALLELQWRTGA-------------------ISLFFSNVIL---TRIAFAFQPMMRRPVDSSAMMMSKLHQCEIHMKSKKRRNFLQNWLNKFPSRAKKIDVISRVVFPAIFAIFNLSYWCYYLLQEAQSE 346 +T+A +VWMPD FF NEKEG FHNI++PNVYIRIFPNG VLYSIR+SLTLACPMNLKLYPLDRQ CSLR+ASYGWTT DL ++WK +PVQ+VK+LHLPRFTLEK+++DYCN KTNTGEYSCL VDL FKREFSYYL+ IY+PCCMLVIVSWVSFWLD AVPARVSLGVTTLLTM+TQT+ IN SLPPV+YTKAIDVWTG VC+TFVF ALLE A SL ++ +L + FA +P++R P D M + KL QCE+HM+ KR N + WL+KFP+R+K+IDVISR+ FP +FA+FNL YW YL +E + E Sbjct: 113 LTEANRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEGDPVQVVKNLHLPRFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTG------------------------------VCLTFVFGALLEFALVNYASRSDIHKENLKKKRRDLEQASLDAASDLLDTDSNATFAMKPLVRHPGD--PMALEKLRQCEVHMQPPKRPNCCKTWLSKFPTRSKRIDVISRITFPLVFALFNLVYWSTYLFREEEDE 448
BLAST of glutamate-gated chloride channel vs. nr
Match: gi|499011993|ref|XP_004537182.1| (glutamate-gated chloride channel isoform X16 [Ceratitis capitata]) HSP 1 Score: 441.81 bits (1135), Expect = 5.065e-151 Identity = 220/368 (59.78%), Postives = 261/368 (70.92%), Query Frame = 0 Query: 1 MTDARKVWMPDTFFRNEKEGRFHNILVPNVYIRIFPNGDVLYSIRVSLTLACPMNLKLYPLDRQQCSLRVASYGWTTGDLQYIWKTTEPVQIVKDLHLPRFTLEKYISDYCNIKTNTGEYSCLTVDLTFKREFSYYLLTIYVPCCMLVIVSWVSFWLDPNAVPARVSLGVTTLLTMSTQTASINNSLPPVAYTKAIDVWTGVSNEGSSHRPKFRRYQGNRKAKALQDGTTIVCVTFVFSALLELQWRTGA-------------------ISLFFSNVIL---TRIAFAFQPMMRRPVDSSAMMMSKLHQCEIHMKSKKRRNFLQNWLNKFPSRAKKIDVISRVVFPAIFAIFNLSYWCYYLLQEAQSE 346 +T+A +VWMPD FF NEKEG FHNI++PNVYIRIFPNG VLYSIR+SLTLACPMNLKLYPLDRQ CSLR+ASYGWTT DL ++WK +PVQ+VK+LHLPRFTLEK+++DYCN KTNTGEYSCL VDL FKREFSYYL+ IY+PCCMLVIVSWVSFWLD AVPARVSLGVTTLLTM+TQT+ IN SLPPV+YTKAIDVWTG VC+TFVF ALLE A SL ++ +L + FA +P++R P D M + KL QCE+HM+ KR N + WL+KFP+R+K+IDVISR+ FP +FA+FNL YW YL +E + E Sbjct: 113 LTEANRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEGDPVQVVKNLHLPRFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTG------------------------------VCLTFVFGALLEFALVNYASRSDIHKENMKKKRRDLEQASLDAASDLLDTDSNATFAMKPLVRHPGD--PMALEKLRQCEVHMQPPKRPNCCKTWLSKFPTRSKRIDVISRITFPLVFALFNLVYWSTYLFREEEDE 448
BLAST of glutamate-gated chloride channel vs. nr
Match: gi|499011989|ref|XP_004537181.1| (glutamate-gated chloride channel isoform X13 [Ceratitis capitata]) HSP 1 Score: 441.81 bits (1135), Expect = 5.420e-151 Identity = 220/368 (59.78%), Postives = 261/368 (70.92%), Query Frame = 0 Query: 1 MTDARKVWMPDTFFRNEKEGRFHNILVPNVYIRIFPNGDVLYSIRVSLTLACPMNLKLYPLDRQQCSLRVASYGWTTGDLQYIWKTTEPVQIVKDLHLPRFTLEKYISDYCNIKTNTGEYSCLTVDLTFKREFSYYLLTIYVPCCMLVIVSWVSFWLDPNAVPARVSLGVTTLLTMSTQTASINNSLPPVAYTKAIDVWTGVSNEGSSHRPKFRRYQGNRKAKALQDGTTIVCVTFVFSALLELQWRTGA-------------------ISLFFSNVIL---TRIAFAFQPMMRRPVDSSAMMMSKLHQCEIHMKSKKRRNFLQNWLNKFPSRAKKIDVISRVVFPAIFAIFNLSYWCYYLLQEAQSE 346 +T+A +VWMPD FF NEKEG FHNI++PNVYIRIFPNG VLYSIR+SLTLACPMNLKLYPLDRQ CSLR+ASYGWTT DL ++WK +PVQ+VK+LHLPRFTLEK+++DYCN KTNTGEYSCL VDL FKREFSYYL+ IY+PCCMLVIVSWVSFWLD AVPARVSLGVTTLLTM+TQT+ IN SLPPV+YTKAIDVWTG VC+TFVF ALLE A SL ++ +L + FA +P++R P D M + KL QCE+HM+ KR N + WL+KFP+R+K+IDVISR+ FP +FA+FNL YW YL +E + E Sbjct: 113 LTEANRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEGDPVQVVKNLHLPRFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTG------------------------------VCLTFVFGALLEFALVNYASRSDIHKENMKKKRRDLEQASLDAASDLLDTDSNATFAMKPLVRHPGD--PMALEKLRQCEVHMQPPKRPNCCKTWLSKFPTRSKRIDVISRITFPLVFALFNLVYWSTYLFREEEDE 448
BLAST of glutamate-gated chloride channel vs. nr
Match: gi|807043632|ref|XP_012162077.1| (glutamate-gated chloride channel isoform X12 [Ceratitis capitata]) HSP 1 Score: 441.81 bits (1135), Expect = 5.430e-151 Identity = 221/373 (59.25%), Postives = 263/373 (70.51%), Query Frame = 0 Query: 1 MTDARKVWMPDTFFRNEKEGRFHNILVPNVYIRIFPNGDVLYSIRVSLTLACPMNLKLYPLDRQQCSLRVASYGWTTGDLQYIWKTTEPVQIVKDLHLPRFTLEKYISDYCNIKTNTGEYSCLTVDLTFKREFSYYLLTIYVPCCMLVIVSWVSFWLDPNAVPARVSLGVTTLLTMSTQTASINNSLPPVAYTKAIDVWTGVSNEGSSHRPKFRRYQGNRKAKALQDGTTIVCVTFVFSALLELQW-----RTG-------------------AISLFFSNVIL---TRIAFAFQPMMRRPVDSSAMMMSKLHQCEIHMKSKKRRNFLQNWLNKFPSRAKKIDVISRVVFPAIFAIFNLSYWCYYLLQEAQSE 346 +T+A +VWMPD FF NEKEG FHNI++PNVYIRIFPNG VLYSIR+SLTLACPMNLKLYPLDRQ CSLR+ASYGWTT DL ++WK +PVQ+VK+LHLPRFTLEK+++DYCN KTNTGEYSCL VDL FKREFSYYL+ IY+PCCMLVIVSWVSFWLD AVPARVSLGVTTLLTM+TQT+ IN SLPPV+YTKAIDVWTG VC+TFVF ALLE R+G SL ++ +L + FA +P++R P D M + KL QCE+HM+ KR N + WL+KFP+R+K+IDVISR+ FP +FA+FNL YW YL +E + E Sbjct: 112 LTEANRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEGDPVQVVKNLHLPRFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTG------------------------------VCLTFVFGALLEFALVNYASRSGLNKANIHKENMKKKRRDLEQASLDAASDLLDTDSNATFAMKPLVRHPGD--PMALEKLRQCEVHMQPPKRPNCCKTWLSKFPTRSKRIDVISRITFPLVFALFNLVYWSTYLFREEEDE 452
BLAST of glutamate-gated chloride channel vs. nr
Match: gi|807043639|ref|XP_012162080.1| (glutamate-gated chloride channel isoform X14 [Ceratitis capitata]) HSP 1 Score: 441.81 bits (1135), Expect = 5.844e-151 Identity = 220/368 (59.78%), Postives = 261/368 (70.92%), Query Frame = 0 Query: 1 MTDARKVWMPDTFFRNEKEGRFHNILVPNVYIRIFPNGDVLYSIRVSLTLACPMNLKLYPLDRQQCSLRVASYGWTTGDLQYIWKTTEPVQIVKDLHLPRFTLEKYISDYCNIKTNTGEYSCLTVDLTFKREFSYYLLTIYVPCCMLVIVSWVSFWLDPNAVPARVSLGVTTLLTMSTQTASINNSLPPVAYTKAIDVWTGVSNEGSSHRPKFRRYQGNRKAKALQDGTTIVCVTFVFSALLELQWRTGA-------------------ISLFFSNVIL---TRIAFAFQPMMRRPVDSSAMMMSKLHQCEIHMKSKKRRNFLQNWLNKFPSRAKKIDVISRVVFPAIFAIFNLSYWCYYLLQEAQSE 346 +T+A +VWMPD FF NEKEG FHNI++PNVYIRIFPNG VLYSIR+SLTLACPMNLKLYPLDRQ CSLR+ASYGWTT DL ++WK +PVQ+VK+LHLPRFTLEK+++DYCN KTNTGEYSCL VDL FKREFSYYL+ IY+PCCMLVIVSWVSFWLD AVPARVSLGVTTLLTM+TQT+ IN SLPPV+YTKAIDVWTG VC+TFVF ALLE A SL ++ +L + FA +P++R P D M + KL QCE+HM+ KR N + WL+KFP+R+K+IDVISR+ FP +FA+FNL YW YL +E + E Sbjct: 112 LTEANRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEGDPVQVVKNLHLPRFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTG------------------------------VCLTFVFGALLEFALVNYASRSDIHKENMKKKRRDLEQASLDAASDLLDTDSNATFAMKPLVRHPGD--PMALEKLRQCEVHMQPPKRPNCCKTWLSKFPTRSKRIDVISRITFPLVFALFNLVYWSTYLFREEEDE 447
BLAST of glutamate-gated chloride channel vs. nr
Match: gi|499011997|ref|XP_004537183.1| (glutamate-gated chloride channel isoform X17 [Ceratitis capitata]) HSP 1 Score: 441.425 bits (1134), Expect = 6.433e-151 Identity = 220/368 (59.78%), Postives = 261/368 (70.92%), Query Frame = 0 Query: 1 MTDARKVWMPDTFFRNEKEGRFHNILVPNVYIRIFPNGDVLYSIRVSLTLACPMNLKLYPLDRQQCSLRVASYGWTTGDLQYIWKTTEPVQIVKDLHLPRFTLEKYISDYCNIKTNTGEYSCLTVDLTFKREFSYYLLTIYVPCCMLVIVSWVSFWLDPNAVPARVSLGVTTLLTMSTQTASINNSLPPVAYTKAIDVWTGVSNEGSSHRPKFRRYQGNRKAKALQDGTTIVCVTFVFSALLELQWRTGA-------------------ISLFFSNVIL---TRIAFAFQPMMRRPVDSSAMMMSKLHQCEIHMKSKKRRNFLQNWLNKFPSRAKKIDVISRVVFPAIFAIFNLSYWCYYLLQEAQSE 346 +T+A +VWMPD FF NEKEG FHNI++PNVYIRIFPNG VLYSIR+SLTLACPMNLKLYPLDRQ CSLR+ASYGWTT DL ++WK +PVQ+VK+LHLPRFTLEK+++DYCN KTNTGEYSCL VDL FKREFSYYL+ IY+PCCMLVIVSWVSFWLD AVPARVSLGVTTLLTM+TQT+ IN SLPPV+YTKAIDVWTG VC+TFVF ALLE A SL ++ +L + FA +P++R P D M + KL QCE+HM+ KR N + WL+KFP+R+K+IDVISR+ FP +FA+FNL YW YL +E + E Sbjct: 112 LTEANRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEGDPVQVVKNLHLPRFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTG------------------------------VCLTFVFGALLEFALVNYASRSDIHKENMKKKRRDLEQASLDAASDLLDTDSNATFAMKPLVRHPGD--PMALEKLRQCEVHMQPPKRPNCCKTWLSKFPTRSKRIDVISRITFPLVFALFNLVYWSTYLFREEEDE 447
BLAST of glutamate-gated chloride channel vs. nr
Match: gi|1135080267|ref|XP_019892422.1| (PREDICTED: glutamate-gated chloride channel isoform X2 [Musca domestica]) HSP 1 Score: 441.81 bits (1135), Expect = 7.313e-151 Identity = 220/373 (58.98%), Postives = 265/373 (71.05%), Query Frame = 0 Query: 1 MTDARKVWMPDTFFRNEKEGRFHNILVPNVYIRIFPNGDVLYSIRVSLTLACPMNLKLYPLDRQQCSLRVASYGWTTGDLQYIWKTTEPVQIVKDLHLPRFTLEKYISDYCNIKTNTGEYSCLTVDLTFKREFSYYLLTIYVPCCMLVIVSWVSFWLDPNAVPARVSLGVTTLLTMSTQTASINNSLPPVAYTKAIDVWTGVSNEGSSHRPKFRRYQGNRKAKALQDGTTIVCVTFVFSALLELQW-----RTGA-------------------ISLFFSNVIL---TRIAFAFQPMMRRPVDSSAMMMSKLHQCEIHMKSKKRRNFLQNWLNKFPSRAKKIDVISRVVFPAIFAIFNLSYWCYYLLQEAQSE 346 +T+A +VWMPD FF NEKEG FHNI++PNVYIRIFPNG VLYSIR+SLTLACPMNLKLYPLDRQ CSLR+ASYGWTT DL ++WK +PVQ+VK+LHLPRFTLEK+++DYCN KTNTGEYSCL VDL FKREFSYYL+ IY+PCCMLVIVSWVSFWLD AVPARVSLGVTTLLTM+TQT+ IN SLPPV+YTKAIDVWTG VC+TFVF ALLE R+G+ S+ ++ +L + FA +P++R P D A + KL QCE+HM++ KR N + WL+KFP+R+K+IDVISR+ FP +FA+FNL YW YL +E + E Sbjct: 113 LTEANRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEGDPVQVVKNLHLPRFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTG------------------------------VCLTFVFGALLEFALVNYASRSGSNKANMHKENMKKKRRDLEQASIDAASDLLDTDSNATFAMKPLVRHPGDPLA--LEKLRQCEVHMQAPKRPNCCKTWLSKFPTRSKRIDVISRITFPLVFALFNLVYWSTYLFREEEDE 453
BLAST of glutamate-gated chloride channel vs. nr
Match: gi|807043623|ref|XP_012162074.1| (glutamate-gated chloride channel isoform X8 [Ceratitis capitata]) HSP 1 Score: 441.425 bits (1134), Expect = 8.520e-151 Identity = 221/373 (59.25%), Postives = 263/373 (70.51%), Query Frame = 0 Query: 1 MTDARKVWMPDTFFRNEKEGRFHNILVPNVYIRIFPNGDVLYSIRVSLTLACPMNLKLYPLDRQQCSLRVASYGWTTGDLQYIWKTTEPVQIVKDLHLPRFTLEKYISDYCNIKTNTGEYSCLTVDLTFKREFSYYLLTIYVPCCMLVIVSWVSFWLDPNAVPARVSLGVTTLLTMSTQTASINNSLPPVAYTKAIDVWTGVSNEGSSHRPKFRRYQGNRKAKALQDGTTIVCVTFVFSALLELQW-----RTG-------------------AISLFFSNVIL---TRIAFAFQPMMRRPVDSSAMMMSKLHQCEIHMKSKKRRNFLQNWLNKFPSRAKKIDVISRVVFPAIFAIFNLSYWCYYLLQEAQSE 346 +T+A +VWMPD FF NEKEG FHNI++PNVYIRIFPNG VLYSIR+SLTLACPMNLKLYPLDRQ CSLR+ASYGWTT DL ++WK +PVQ+VK+LHLPRFTLEK+++DYCN KTNTGEYSCL VDL FKREFSYYL+ IY+PCCMLVIVSWVSFWLD AVPARVSLGVTTLLTM+TQT+ IN SLPPV+YTKAIDVWTG VC+TFVF ALLE R+G SL ++ +L + FA +P++R P D M + KL QCE+HM+ KR N + WL+KFP+R+K+IDVISR+ FP +FA+FNL YW YL +E + E Sbjct: 113 LTEANRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEGDPVQVVKNLHLPRFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTG------------------------------VCLTFVFGALLEFALVNYASRSGLNKANIHKENMKKKRRDLEQASLDAASDLLDTDSNATFAMKPLVRHPGD--PMALEKLRQCEVHMQPPKRPNCCKTWLSKFPTRSKRIDVISRITFPLVFALFNLVYWSTYLFREEEDE 453 The following BLAST results are available for this feature:
BLAST of glutamate-gated chloride channel vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 25
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BLAST of glutamate-gated chloride channel vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of glutamate-gated chloride channel vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
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The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold807_size94382:67718..81514+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold807_size94382-snap-gene-0.18 ID=maker-scaffold807_size94382-snap-gene-0.18|Name=glutamate-gated chloride channel|organism=Tigriopus kingsejongensis|type=gene|length=13797bp|location=Sequence derived from alignment at scaffold807_size94382:67718..81514+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'glutamate-gated chloride channel' has the following synonyms
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