glutamate-gated chloride channel, maker-scaffold807_size94382-snap-gene-0.18 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of glutamate-gated chloride channel vs. L. salmonis genes
Match: EMLSAG00000003185 (supercontig:LSalAtl2s:LSalAtl2s176:68925:134641:-1 gene:EMLSAG00000003185 transcript:EMLSAT00000003185 description:"maker-LSalAtl2s176-augustus-gene-1.7") HSP 1 Score: 95.1301 bits (235), Expect = 7.900e-22 Identity = 58/246 (23.58%), Postives = 105/246 (42.68%), Query Frame = 0 Query: 6 KVWMPDTFFRNEKEGRFHNILVPNVYIRIFPNGDVLYSIRVSLTLACPMNLKLYPLDRQQCSLRVASYGWTTGDLQYIW--------KTTEPVQIVKDLHLPRFTLEKYISDYCNIKTNTGEYSCLTVDLTFKREFSYYLLTIYVPCCMLVIVSWVSFWLDPNAVPARVSLGVTTLLTMSTQTASINNSLPPVAYTKAIDVWTGVSNEGSSHRPKFRRYQGNRKAKALQDGTTIVCVTFVFSALLE 243 ++W+P+ F N K + +L + + I D+LYS +T CPM +PLD Q+C +V SY + +++ + + + + D+ + ++ I + G YS ++ R S+Y++T Y+P + V+VSW+SF + P +P R++L +T L + S+ + P AI+ W + C+ FVF AL+E Sbjct: 120 ELWLPNIFIYNLKTFKVVEVLSKHAGLWITSEKDILYSQATHITFICPMRFDAFPLDTQRCKFQVGSYSYDDTKMRFAGSPRVTGYAEXSRAIVLDYDIQIKSLKMKDMIYHSGTL----GNYSLAGFEMVLHRYVSHYIITYYLPSGLFVVVSWISFVVPPTVIPGRMALLITLFLVLVNIFNSVTTNTPKAEGLTAIEAW------------------------------MLACILFVFGALVE 331
BLAST of glutamate-gated chloride channel vs. L. salmonis genes
Match: EMLSAG00000008455 (supercontig:LSalAtl2s:LSalAtl2s519:173869:181393:1 gene:EMLSAG00000008455 transcript:EMLSAT00000008455 description:"snap_masked-LSalAtl2s519-processed-gene-1.11") HSP 1 Score: 86.6557 bits (213), Expect = 2.032e-19 Identity = 80/341 (23.46%), Postives = 141/341 (41.35%), Query Frame = 0 Query: 7 VWMPDTFFRNEKEGRFHNILVPNVYIRIFPNGDVLYSIRVSLTLACPMNLKLYPLDRQQCSLRVASYGWTTGDLQYIWKTT--EPV--QIVKDLHL---PRFTLEKYISDYCNIKTNTGEYSCLTVDLTFKREFSYYLLTIYVPCCMLVIVSWVSFWLDPNAVPARVSLGVTTLLTMSTQTASINNSLPPVAYTKAIDVWTGVSNEGSSHRPKFRRYQGNRKAKALQDGTTIVCVTFVFSALLELQWRTGAISLFFSNVILTRIAFAFQPMMRRPVDSSAMMMSKLHQCEIHMKSKKRRNFLQNWLNKFPSRAKKIDVISRVVFPAIFAIFNLSYWCYYLL 340 +W+P+ F N + L + + D+ Y+ +T CPM +PLD+ C V S + + + + T +P+ + D + P T ++ I+ TG YS ++T R + YL Y+P + V VSWVSF + P+ VP R++L VT L + +I N P V AI W I C+ FVF ALL G ++ + V+L + ++++ D + + + ++ ++K++ + + K+D I VFP +F +FN+ YW +++L Sbjct: 54 LWVPNVFVYNLVSFHALDCLKKLAGLWVAEGKDLFYNQATHVTFMCPMRFNKFPLDQHSCKFLVGSTNYDMTRMLFDYNTLSYDPLSGNTILDYRIQIKPLKTADRIIN-----YGETGNYSLTGFEMTLTRNMAKYLYIYYLPSGLFVGVSWVSFLIPPDVVPGRMALLVTLFLVLINIFNTITNVSPNVEGMXAISSW------------------------------MIACMFFVFGALL------GYAAILY--VLLMKKK---NCLIKKRNDLAFVHAPSCYFYKVSEQTKRKEEIEE---LDHTEKLAKVDSILLYVFPFMFLVFNIIYWPFWIL 345
BLAST of glutamate-gated chloride channel vs. L. salmonis genes
Match: EMLSAG00000001113 (supercontig:LSalAtl2s:LSalAtl2s1186:160345:169896:1 gene:EMLSAG00000001113 transcript:EMLSAT00000001113 description:"maker-LSalAtl2s1186-snap-gene-1.38") HSP 1 Score: 84.3445 bits (207), Expect = 3.186e-18 Identity = 61/247 (24.70%), Postives = 103/247 (41.70%), Query Frame = 0 Query: 5 RKVWMPDTFFRNEKEGRFHNILVPNVYIRIFPNGDVLYSIRVSLTLACPMNLKLYPLDRQQCSLRVASYGWTTGDLQYIW--------KTTEPVQIVKDLHLPRFTLEKYISDYCNIKTNTGEYSCLTVDLTFKREFSYYLLTIYVPCCMLVIVSWVSFWLDPNAVPARVSLGVTTLLTMSTQTASINNSLPPVAYTKAIDVWTGVSNEGSSHRPKFRRYQGNRKAKALQDGTTIVCVTFVFSALLE 243 + VWMPD F + K + ++L + I + +LYS +T CPM +PLD Q C +V S + ++++ KT + + D+ + + E D + G +S +L R S Y++T Y+P + VIVSW+SF + + +P R++L VT L + ++ + P AI+ W + C+ FVF AL+E Sbjct: 152 KDVWMPDIFIYSLKTYKVMDVLNKLAGLWIGADKTILYSQATHITFICPMRFDKFPLDTQVCKFQVGSCSYDDTKMRFMTENAGYQSPKTANSIALDYDIQIKMLSKE----DQVFLGGGLGNFSLAGFELVLHRYVSTYIITYYLPSGLFVIVSWISFLIPMDVIPGRMALLVTLFLVLVNIFNTVTTNTPKAEGLTAIEAW------------------------------MLACILFVFGALIE 364
BLAST of glutamate-gated chloride channel vs. L. salmonis genes
Match: EMLSAG00000011211 (supercontig:LSalAtl2s:LSalAtl2s765:133774:155316:1 gene:EMLSAG00000011211 transcript:EMLSAT00000011211 description:"maker-LSalAtl2s765-snap-gene-1.16") HSP 1 Score: 82.8037 bits (203), Expect = 4.938e-18 Identity = 66/258 (25.58%), Postives = 107/258 (41.47%), Query Frame = 0 Query: 5 RKVWMPD-TFFRNEKEGRFHNILVPNVYIRIFPNGDVLYSIRVSLTLACPMNLKLYPLDRQQCSLRVAS---------YGWTTGDLQYIWKTTEPVQI--------VKDLHLPRF-TLEKYISDYCNIKTNTGEYSCLTVDLTFKREFSYYLLTIYVPCCMLVIVSWVSFWLDPNAVPARVSLGVTTLLTMSTQTASINNSLPPVAYTKAIDVWTGVSNEGSSHRPKFRRYQGNRKAKALQDGTTIVCVTFVFSALLE 243 R +W P+ + EK GR +L +RI N + Y + V +T++C M YPLD C +V S +G +T L + + + VQ ++ L + T E+ ++ +G Y+ + R+ YL+ +Y+P CM V+ SWVSF + P VP R++L VT L + S+ P + AID++ +VC+ VF AL+E Sbjct: 39 RYIWYPELEIYGLEKFGR-QRVLKEMSGVRIRKNKTIHYELGVRITISCRMMFDDYPLDAHTCQFQVGSCKYQDITRPWGKSTYQLLSDYDSNKTVQCSSSYVYDQIRQRSLQHYITFEELPEKDRSVVLPSGTYAACGFQIQLVRKQMQYLVQVYLPSCMFVVTSWVSFLIKPEVVPGRMALLVTLFLVLINIFNSVRERAPISSKLNAIDLY------------------------------LVVCIFLVFGALME 265
BLAST of glutamate-gated chloride channel vs. L. salmonis genes
Match: EMLSAG00000012971 (supercontig:LSalAtl2s:LSalAtl2s98:1296021:1320554:-1 gene:EMLSAG00000012971 transcript:EMLSAT00000012971 description:"maker-LSalAtl2s98-augustus-gene-14.11") HSP 1 Score: 75.0998 bits (183), Expect = 3.340e-15 Identity = 38/129 (29.46%), Postives = 68/129 (52.71%), Query Frame = 0 Query: 81 QYIWKTTEPVQIVKDLHLPRF-----TLEKYISDYCNIKTN-----TGEYSCLTVDLTFKREFSYYLLTIYVPCCMLVIVSWVSFWLDPNAVPARVSLGVTTLLTMSTQTASINNSLPPVAYTKAIDVW 199 + IW + KDL +P + +L Y + T+ G Y + + + KR +Y+LL Y+P + V V+W+S +L P ++P R+++ +TTLLT++ ++ S P V+Y A+D+W Sbjct: 115 KLIWFPDIYIDFAKDLRIPTYMTPPASLRIYRNSTIRYATHPFVNFIGVYPGVIMKIILKRNINYHLLQTYLPSGIFVFVAWLSLFLPPQSIPGRITMAMTTLLTLAAMFGAVRQSTPRVSYVSALDIW 243
BLAST of glutamate-gated chloride channel vs. SwissProt
Match: gi|62901525|sp|Q94900.2|GLUCL_DROME (RecName: Full=Glutamate-gated chloride channel; Short=DrosGluCl; Flags: Precursor) HSP 1 Score: 434.491 bits (1116), Expect = 1.559e-150 Identity = 221/377 (58.62%), Postives = 264/377 (70.03%), Query Frame = 0 Query: 1 MTDARKVWMPDTFFRNEKEGRFHNILVPNVYIRIFPNGDVLYSIRVSLTLACPMNLKLYPLDRQQCSLRVASYGWTTGDLQYIWKTTEPVQIVKDLHLPRFTLEKYISDYCNIKTNTGEYSCLTVDLTFKREFSYYLLTIYVPCCMLVIVSWVSFWLDPNAVPARVSLGVTTLLTMSTQTASINNSLPPVAYTKAIDVWTGVSNEGSSHRPKFRRYQGNRKAKALQDGTTIVCVTFVFSALLELQW-----RTGA-------------------ISLFFSNVIL---TRIAFAFQPMMRRPVDSSAMMMSKLHQCEIHMKSKKRRNFLQNWLNKFP----SRAKKIDVISRVVFPAIFAIFNLSYWCYYLLQEAQSE 346 +T+A +VWMPD FF NEKEG FHNI++PNVYIRIFPNG VLYSIR+SLTLACPMNLKLYPLDRQ CSLR+ASYGWTT DL ++WK +PVQ+VK+LHLPRFTLEK+++DYCN KTNTGEYSCL VDL FKREFSYYL+ IY+PCCMLVIVSWVSFWLD AVPARVSLGVTTLLTM+TQT+ IN SLPPV+YTKAIDVWTG VC+TFVF ALLE R+G+ SL ++ +L + FA +P++R P D A + K QCE+HM++ KR N + WL+KFP SR+K+IDVISR+ FP +FA+FNL YW YL +E + E Sbjct: 112 LTEANRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEGDPVQVVKNLHLPRFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTG------------------------------VCLTFVFGALLEFALVNYASRSGSNKANMHKESMKKKRRDLEQASLDAASDLLDTDSNATFAMKPLVRHPGDPLA--LEKRLQCEVHMQAPKRPNCCKTWLSKFPTRQCSRSKRIDVISRITFPLVFALFNLVYWSTYLFREEEDE 456
BLAST of glutamate-gated chloride channel vs. SwissProt
Match: gi|704000349|sp|G5EBR3.1|GLUCL_CAEEL (RecName: Full=Glutamate-gated chloride channel alpha; AltName: Full=Avermectin-sensitive glutamate-gated chloride channel GluCl alpha; AltName: Full=GluCl alpha; Flags: Precursor) HSP 1 Score: 268.855 bits (686), Expect = 1.381e-85 Identity = 147/355 (41.41%), Postives = 201/355 (56.62%), Query Frame = 0 Query: 1 MTDARKVWMPDTFFRNEKEGRFHNILVPNVYIRIFPNGDVLYSIRVSLTLACPMNLKLYPLDRQQCSLRVASYGWTTGDLQYIWKTTEPVQIVKDLH--LPRFTLEKYISDYCNIKTNTGEYSCLTVDLTFKREFSYYLLTIYVPCCMLVIVSWVSFWLDPNAVPARVSLGVTTLLTMSTQTASINNSLPPVAYTKAIDVWTGVSNEGSSHRPKFRRYQGNRKAKALQDGTTIVCVTFVFSALLELQWRTGAISLFFSNVILTRIAFAFQPMMRRPVDSSAMMMSKLHQ---CEIHMKSKKRRNF------LQNWLNKFPSR------AKKIDVISRVVFPAIFAIFNLSYWCYY 338 +T ++WMPDTFF NEK+ H I PNV IRI +G VLYS+R+SL L+CPM L+ YP+D QQCS+ +ASY +TT D++Y+WK P+Q+ L LP F L + YC TNTG YSCL + KREFS+YLL +Y+P CMLVIVSWVSFW D A+PARV+LGVTTLLTM+ Q+A IN+ LPPV+Y KAIDVW G C+TF+F ALLE N I + + R + ++ LH ++ + +K R + ++LN ++ +K++D+ISR +FP +F +FN+ YW + Sbjct: 140 LTVGHQIWMPDTFFPNEKQAYKHTIDKPNVLIRIHNDGTVLYSVRISLVLSCPMYLQYYPMDVQQCSIDLASYAYTTKDIEYLWKEHSPLQLKVGLSSSLPSFQLTNTSTTYCTSVTNTGIYSCLRTTIQLKREFSFYLLQLYIPSCMLVIVSWVSFWFDRTAIPARVTLGVTTLLTMTAQSAGINSQLPPVSYIKAIDVWIG------------------------------ACMTFIFCALLEFA---------LVNHIANKQGVERKARTERE-KAEIPLLQNLHNDVPTKVFNQEEKVRTVPLNRRQMNSFLNLLETKTEWNDISKRVDLISRALFPVLFFVFNILYWSRF 454
BLAST of glutamate-gated chloride channel vs. SwissProt
Match: gi|121580|sp|P24524.1|GLRA3_RAT (RecName: Full=Glycine receptor subunit alpha-3; Flags: Precursor) HSP 1 Score: 233.417 bits (594), Expect = 7.837e-72 Identity = 131/347 (37.75%), Postives = 188/347 (54.18%), Query Frame = 0 Query: 7 VWMPDTFFRNEKEGRFHNILVPNVYIRIFPNGDVLYSIRVSLTLACPMNLKLYPLDRQQCSLRVASYGWTTGDLQYIWKTTEPVQIVKDLHLPRFTL-EKYISDYCNIKTNTGEYSCLTVDLTFKREFSYYLLTIYVPCCMLVIVSWVSFWLDPNAVPARVSLGVTTLLTMSTQTASINNSLPPVAYTKAIDVWTGVS--------------NEGSSHRPKFRRYQGNRKAKALQDGTTIVCVTFVFSALLELQWRTGAISLFFSNVILTRIAFAFQPMMRRPVDSSAMMMSKLHQCEIHMKSKKRRNFLQNWLNKFPSRAKKIDVISRVVFPAIFAIFNLSYWCYY 338 +W PD FF NEK FH + N +RIF NG+VLYSIR++LTL+CPM+LK +P+D Q C +++ S+G+T DL + W+ PVQ+ + L LP+F L E+ YC NTG+++C+ V +R+ YYL+ +Y+P ++VI+SWVSFW++ +A PARV+LG+TT+LTM+TQ++ SLP V+Y KAID+W V N S + R++ RK K T F+ LE +R L+ A+ P ++ + H ++ KS F RAKKID ISR FP F IFN+ YW Y Sbjct: 126 IWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSRQHKELLRFRRKRKNK-----------TEAFA--LEKFYRFSDTDDEVRESRLSFTAYGMGPCLQ--AKDGVVPKGPNHAVQVMPKSADEMR------KVFIDRAKKIDTISRACFPLAFLIFNIFYWVIY 451
BLAST of glutamate-gated chloride channel vs. SwissProt
Match: gi|116242496|sp|O75311.2|GLRA3_HUMAN (RecName: Full=Glycine receptor subunit alpha-3; Flags: Precursor) HSP 1 Score: 233.417 bits (594), Expect = 7.921e-72 Identity = 137/357 (38.38%), Postives = 194/357 (54.34%), Query Frame = 0 Query: 7 VWMPDTFFRNEKEGRFHNILVPNVYIRIFPNGDVLYSIRVSLTLACPMNLKLYPLDRQQCSLRVASYGWTTGDLQYIWKTTEPVQIVKDLHLPRFTL-EKYISDYCNIKTNTGEYSCLTVDLTFKREFSYYLLTIYVPCCMLVIVSWVSFWLDPNAVPARVSLGVTTLLTMSTQTASINNSLPPVAYTKAIDVWTGVSNEGSSHRPKFRRYQGNRKAKALQDGTTIVCVTFVFSALLELQWRTGAISLFFSNVILTR-------IAFAFQPMMR-RPVDS---------SAMMMSKLHQCEIHMKSKKRRNFLQ------NWLNK-FPSRAKKIDVISRVVFPAIFAIFNLSYWCYY 338 +W PD FF NEK FH + N +RIF NG+VLYSIR++LTL+CPM+LK +P+D Q C +++ S+G+T DL + W+ PVQ+ + L LP+F L E+ YC NTG+++C+ V +R+ YYL+ +Y+P ++VI+SWVSFW++ +A PARV+LG+TT+LTM+TQ++ SLP V+Y KAID+W VC+ FVFSALLE +S ++ R AFA + R +D +A M Q + M K + +Q + + K F RAKKID ISR FP F IFN+ YW Y Sbjct: 126 IWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMA------------------------------VCLLFVFSALLEYA-AVNFVSRQHKELLRFRRKRKNKTEAFALEKFYRFSDMDDEVRESRFSFTAYGMGPCLQAKDGMTPKGPNHPVQVMPKSPDEMRKVFIDRAKKIDTISRACFPLAFLIFNIFYWVIY 451
BLAST of glutamate-gated chloride channel vs. SwissProt
Match: gi|6647527|sp|O93430.1|GLRA1_DANRE (RecName: Full=Glycine receptor subunit alphaZ1; Flags: Precursor) HSP 1 Score: 231.106 bits (588), Expect = 3.696e-71 Identity = 128/347 (36.89%), Postives = 183/347 (52.74%), Query Frame = 0 Query: 7 VWMPDTFFRNEKEGRFHNILVPNVYIRIFPNGDVLYSIRVSLTLACPMNLKLYPLDRQQCSLRVASYGWTTGDLQYIWKTTEPVQIVKDLHLPRFTL-EKYISDYCNIKTNTGEYSCLTVDLTFKREFSYYLLTIYVPCCMLVIVSWVSFWLDPNAVPARVSLGVTTLLTMSTQTASINNSLPPVAYTKAIDVWTGVSNEGSSHRPKFRRYQGNRKAKALQDGTTIVCVTFVFSALLE--------------LQWRTGAISLFFSNVILTRIAFAFQPMMRRPVDSSAMMMSKLHQCEIHMKSKKRRNFLQNWLNKFPSRAKKIDVISRVVFPAIFAIFNLSYWCYY 338 +W PD FF NEK FH + N +RI NG+VLYSIR++L LACPM+LK +P+D Q C +++ S+G+T DL + W VQ+ L LP+F L E+ YC NTG+++C+ +R+ YYL+ +Y+P ++VI+SWVSFW++ +A PARV LG+TT+LTM+TQ++ SLP V+Y KAID+W VC+ FVFSALLE L+++ L R +FA M + + M K + + ++ F SRAK+ID +SRV FP +F IFN+ YW Y Sbjct: 117 IWKPDLFFANEKGANFHEVTTDNKLLRISKNGNVLYSIRITLVLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWDEKGAVQVADGLTLPQFILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMA------------------------------VCLLFVFSALLEYAAVNFIARQHKELLRFQRRRRHLKEDEAGDGRFSFAAYGMGPACLQAKDGMAIKGNNNNAPTSTNPPEKTVEEMRKLFISRAKRIDTVSRVAFPLVFLIFNIFYWITY 433
BLAST of glutamate-gated chloride channel vs. SwissProt
Match: gi|66774025|sp|Q91XP5.2|GLRA3_MOUSE (RecName: Full=Glycine receptor subunit alpha-3; Flags: Precursor) HSP 1 Score: 231.491 bits (589), Expect = 4.025e-71 Identity = 131/349 (37.54%), Postives = 191/349 (54.73%), Query Frame = 0 Query: 7 VWMPDTFFRNEKEGRFHNILVPNVYIRIFPNGDVLYSIRVSLTLACPMNLKLYPLDRQQCSLRVASYGWTTGDLQYIWKTTEPVQIVKDLHLPRFTL-EKYISDYCNIKTNTGEYSCLTVDLTFKREFSYYLLTIYVPCCMLVIVSWVSFWLDPNAVPARVSLGVTTLLTMSTQTASINNSLPPVAYTKAIDVWTGVS--------------NEGSSHRPKFRRYQGNRKAKALQDGTTIVCVTFVFSALLELQWRTGAISLFFSNVILTRIAFAFQPMMRRPVDSSAMMMSKLHQCEIHMKS--KKRRNFLQNWLNKFPSRAKKIDVISRVVFPAIFAIFNLSYWCYY 338 +W PD FF NEK FH + N +RIF NG+VLYSIR++LTL+CPM+LK +P+D Q C +++ S+G+T DL + W+ PVQ+ + L LP+F L E+ YC NTG+++C+ V +R+ YYL+ +Y+P ++VI+SWVSFW++ +A PARV+LG+TT+LTM+TQ++ SLP V+Y KAID+W V N S + R++ RK K T F+ LE +R + A+ P ++ + H ++ KS + R+ F+ RAKKID ISR FP F IFN+ YW Y Sbjct: 126 IWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSRQHKELLRFRRKRKNK-----------TEAFA--LEKFYRFSDTDDEVRESRFSFTAYGMGPCLQ--AKDGVVPKGPNHAVQVMPKSPDEMRKVFI--------DRAKKIDTISRACFPLAFLIFNIFYWVIY 451
BLAST of glutamate-gated chloride channel vs. SwissProt
Match: gi|66774003|sp|Q7TNC8.1|GLRA2_MOUSE (RecName: Full=Glycine receptor subunit alpha-2; Flags: Precursor) HSP 1 Score: 226.098 bits (575), Expect = 3.726e-69 Identity = 129/354 (36.44%), Postives = 187/354 (52.82%), Query Frame = 0 Query: 7 VWMPDTFFRNEKEGRFHNILVPNVYIRIFPNGDVLYSIRVSLTLACPMNLKLYPLDRQQCSLRVASYGWTTGDLQYIWKTTEPVQIVKDLHLPRFTL-EKYISDYCNIKTNTGEYSCLTVDLTFKREFSYYLLTIYVPCCMLVIVSWVSFWLDPNAVPARVSLGVTTLLTMSTQTASINNSLPPVAYTKAIDVWTGVSNEGSSHRPKFRRYQGNRKAKALQDGTTIVCVTFVFSALLEL-----------QWRTGAISLFFSN-----VILTRIAFAFQPM-----MRRPVDSSAMMMSKLHQCEIHMKSKKRRNFLQNWLNKFPSRAKKIDVISRVVFPAIFAIFNLSYWCYY 338 +W PD FF NEK FH++ N +RI NG VLYSIR++LTL+CPM+LK +P+D Q C++++ S+G+T DL + W + PVQ+ + L LP+F L E+ YC NTG+++C+ V +R+ YYL+ +Y+P ++VI+SWVSFW++ +A PARV+LG+TT+LTM+TQ++ SLP V+Y KAID+W VC+ FVF+ALLE ++ N +R F+ M M+ A + L Q + K++ F RAK+ID ISR FP F IFN+ YW Y Sbjct: 127 IWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMA------------------------------VCLLFVFAALLEYAAVNFVSRQHKEFLRLRRRQKRQNKEEDVTRESRFNFSGYGMGHCLQMKDGTAVKATPANPLPQPPKDADAIKKK---------FVDRAKRIDTISRAAFPLAFLIFNIFYWITY 441
BLAST of glutamate-gated chloride channel vs. SwissProt
Match: gi|78099775|sp|Q61603.3|GLRA4_MOUSE (RecName: Full=Glycine receptor subunit alpha-4; Flags: Precursor) HSP 1 Score: 222.631 bits (566), Expect = 1.118e-67 Identity = 128/353 (36.26%), Postives = 187/353 (52.97%), Query Frame = 0 Query: 7 VWMPDTFFRNEKEGRFHNILVPNVYIRIFPNGDVLYSIRVSLTLACPMNLKLYPLDRQQCSLRVASYGWTTGDLQYIWKTTEP-VQIVKDLHLPRFTL--EKYISDYCNIKTNTGEYSCLTVDLTFKREFSYYLLTIYVPCCMLVIVSWVSFWLDPNAVPARVSLGVTTLLTMSTQTASINNSLPPVAYTKAIDVWTGVSNEGSSHRPKFRRYQGNRKAKALQDGTTIVCVTFVFSALLE--------------LQWRTGAISLFFSNVILTRIAFAFQ----PMMRRPVDSSAMMMSKLHQCEIHMKSKKRRNFLQNWLNKFPSRAKKIDVISRVVFPAIFAIFNLSYWCYY 338 +W PD FF NEK FH + N +RIF NG+VLYSIR++L L+CPM+LK +P+D Q C++++ S+G+T DL + W P VQ+ + L LP+F L EK + YC NTG+++C+ V +R+ YYL+ +Y+P ++VI+SWVSFW++ +A PARV LG+TT+LTM+TQ++ SLP V+Y KAID+W VC+ FVF+ALLE ++ R I+ F F+ + D M S ++ + K ++ + RAK+ID ISR VFP F +FN+ YW Y Sbjct: 126 IWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLMFEWLEDAPAVQVAEGLTLPQFILRDEKDLG-YCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMA------------------------------VCLLFVFAALLEYAAVNFVSRQHKEFMRLRRRQRRQRMEEDIIRESRFYFRGYGLGHCLQARDGGPMEGSSIYSPQPPTPLLKEGETMRKL---YVDRAKRIDTISRAVFPFTFLVFNIFYWVVY 444
BLAST of glutamate-gated chloride channel vs. SwissProt
Match: gi|74962112|sp|Q17328.1|GLUCB_CAEEL (RecName: Full=Glutamate-gated chloride channel subunit beta; Short=Glu-Cl subunit beta; AltName: Full=Avermectin-sensitive glutamate-gated chloride channel subunit; Flags: Precursor) HSP 1 Score: 218.009 bits (554), Expect = 3.967e-66 Identity = 134/348 (38.51%), Postives = 192/348 (55.17%), Query Frame = 0 Query: 5 RKVWMPDTFFRNEKEGRFHNILVPNVYIRIFPNGDVLYSIRVSLTLACPMNLKLYPLDRQQCSLRVASYGWTTGDLQYIWKTTEPVQIVKDL--HLPRFTLEKYISDY-CNIKTNTGEYSCLTVDLTFKREFSYYLLTIYVPCCMLVIVSWVSFWLDPNAVPARVSLGVTTLLTMSTQTASINNSLPPVAYTKAIDVWTGVSNEGSSHRPKFRRYQGNRKAKALQDGTTIVCVTFVFSALLELQWRTGAISLFFSNVILTRIAFAFQPMMRRPVDSSAMMMSKLHQ--CEIHMKSKKR--RNFLQNWLNKFPSRAKKIDVISRVVFPAIFAIFNLSYWCYYLLQEAQS 345 + +W+PDTFF EK H I + N+++RI+P+G +LYS R+SLT +CPM L+LYPLD Q C+ + SY T D+ Y W + PVQ+ + LP F L+ Y ++ C TNTG Y CL + L FKR+FSYYL+ +Y P M+VIVSWVSFW+D ++ RV+LGVTTLLTM+T ++IN LPPV+Y K +DVW G C TFVF ALLE + + S+ ++ +R A + RR + M+ ++++Q C H + R+ ++ + K KID +R V P F FN+ YW L+ A + Sbjct: 114 KSLWIPDTFFPTEKAAHRHLIDMENMFLRIYPDGKILYSSRISLTSSCPMRLQLYPLDYQSCNFDLVSYAHTMNDIMYEWDPSTPVQLKPGVGSDLPNFILKNYTTNADCTSHTNTGSYGCLRMQLLFKRQFSYYLVQLYAPTTMIVIVSWVSFWIDLHSTAGRVALGVTTLLTMTTMQSAINAKLPPVSYVKVVDVWLG------------------------------ACQTFVFGALLEYAFVSYQDSVRQND--RSREKAARKAQRRR--EKLEMVDAEVYQPPCTCHTFEARETFRDKVRRYFTKPDYLPAKIDFYARFVVPLAFLAFNVIYWVSCLIMSANA 427
BLAST of glutamate-gated chloride channel vs. SwissProt
Match: gi|121579|sp|P22771.1|GLRA2_RAT (RecName: Full=Glycine receptor subunit alpha-2; AltName: Full=Glycine receptor strychnine-binding subunit; Flags: Precursor) HSP 1 Score: 216.853 bits (551), Expect = 1.384e-65 Identity = 126/348 (36.21%), Postives = 184/348 (52.87%), Query Frame = 0 Query: 7 VWMPDTFFRNEKEGRFHNILVPNVYIRIFPNGDVLYSIRVSLTLACPMNLKLYPLDRQQCSLRVASYGWTTGDLQYIWKTTEPVQIVKDLHLPRFTL-EKYISDYCNIKTNTGEYSCLTVDLTFKREFSYYLLTIYVPCCMLVIVSWVSFWLDPNAVPARVSLGVTTLLTMSTQTASINNSLPPVAYTKAIDVWTGVSNEGSSHRPKFRRYQGNRKAKALQDGTTIVCVTFVFSALLE---LQWRTGAISLFFSNVILTRIAFAFQPMMRRP-VDSSAMMMSKLHQCEIHMKSKKRRNFLQNWLNKFPSRA-----------KKIDVISRVVFPAIFAIFNLSYWCYY 338 +W PD FF NEK FH++ N +RI NG VLYSIR++LTL+CPM+LK +P+D Q C++++ S+ +T DL + W + PVQ+ + L LP+F L E+ YC NTG+++C+ V +R+ YYL+ +Y+P ++VI+SWVSFW++ +A PARV+LG+TT+LTM+TQ++ SLP V+Y KAID+W VC+ FVF+ALLE + + + F + + + R + S M Q + K N L + P A K+ID ISR FP F IFN+ YW Y Sbjct: 127 IWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFEYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMA------------------------------VCLLFVFAALLEYAAVNFVSRQHKEFLRLRRRQKRQNKEEDVTRESRFNFSGYGMGHCLQVKDGTAVKATP---ANPLPQPPKDADAIKKKFVDRAKRIDTISRAAFPLAFLIFNIFYWITY 441
BLAST of glutamate-gated chloride channel vs. nr
Match: gi|1325313968|ref|XP_023338657.1| (LOW QUALITY PROTEIN: glutamate-gated chloride channel-like [Eurytemora affinis]) HSP 1 Score: 465.692 bits (1197), Expect = 2.298e-160 Identity = 239/348 (68.68%), Postives = 258/348 (74.14%), Query Frame = 0 Query: 1 MTDARKVWMPDTFFRNEKEGRFHNILVPNVYIRIFPNGDVLYSIRVSLTLACPMNLKLYPLDRQQCSLRVASYGWTTGDLQYIWKTTEPVQIVKDLHLPRFTLEKYISDYCNIKTNTGEYSCLTVDLTFKREFSYYLLTIYVPCCMLVIVSWVSFWLDPNAVPARVSLGVTTLLTMSTQTASINNSLPPVAYTKAIDVWTGVSNEGSSHRPKFRRYQGNRKAKALQDGTTIVCVTFVFSALLE--------------LQWRTGAISLFFSNVIL--------TRIAFAFQPMMRRPVDS----SAMMMSKLHQCEIHMKSKKRRNFLQNWLNKFPSRAKKIDVISRVV 322 MTDARKVWMPDTFFRNEKEGRFHNILVPNVYIRIFP+G VLYSIRVSLTLACPMNLKLYPLDRQ+CSLRVASYGWTT DL+Y WKT PVQIVKDLHLPRFTLEKY+SDYCNIKTNTGEYSCLTVDLTFKREFSYYLLTIYVPCCMLVIVSWVSFWLDPNAVPARVSLGVTTLLTMSTQ ASINNSLPPVAYTKAIDVWTG VC+ FVF ALLE ++ R + F +F +PMMRR D+ + ++ +HQCEIHMK +KR+NFL WLNKFPSRAKKIDV+SRV+ Sbjct: 117 MTDARKVWMPDTFFRNEKEGRFHNILVPNVYIRIFPDGYVLYSIRVSLTLACPMNLKLYPLDRQKCSLRVASYGWTTDDLRYQWKTDGPVQIVKDLHLPRFTLEKYVSDYCNIKTNTGEYSCLTVDLTFKREFSYYLLTIYVPCCMLVIVSWVSFWLDPNAVPARVSLGVTTLLTMSTQQASINNSLPPVAYTKAIDVWTG------------------------------VCIFFVFGALLEYALVNYASRSDANRIRKRNAKKKIEFDRAAFDAEHMEEHNGGSFPMKPMMRRSGDALIPGANFPINNIHQCEIHMKPRKRQNFLMAWLNKFPSRAKKIDVLSRVI 434
BLAST of glutamate-gated chloride channel vs. nr
Match: gi|807043641|ref|XP_012162081.1| (glutamate-gated chloride channel isoform X15 [Ceratitis capitata]) HSP 1 Score: 442.195 bits (1136), Expect = 4.305e-151 Identity = 220/368 (59.78%), Postives = 261/368 (70.92%), Query Frame = 0 Query: 1 MTDARKVWMPDTFFRNEKEGRFHNILVPNVYIRIFPNGDVLYSIRVSLTLACPMNLKLYPLDRQQCSLRVASYGWTTGDLQYIWKTTEPVQIVKDLHLPRFTLEKYISDYCNIKTNTGEYSCLTVDLTFKREFSYYLLTIYVPCCMLVIVSWVSFWLDPNAVPARVSLGVTTLLTMSTQTASINNSLPPVAYTKAIDVWTGVSNEGSSHRPKFRRYQGNRKAKALQDGTTIVCVTFVFSALLELQWRTGA-------------------ISLFFSNVIL---TRIAFAFQPMMRRPVDSSAMMMSKLHQCEIHMKSKKRRNFLQNWLNKFPSRAKKIDVISRVVFPAIFAIFNLSYWCYYLLQEAQSE 346 +T+A +VWMPD FF NEKEG FHNI++PNVYIRIFPNG VLYSIR+SLTLACPMNLKLYPLDRQ CSLR+ASYGWTT DL ++WK +PVQ+VK+LHLPRFTLEK+++DYCN KTNTGEYSCL VDL FKREFSYYL+ IY+PCCMLVIVSWVSFWLD AVPARVSLGVTTLLTM+TQT+ IN SLPPV+YTKAIDVWTG VC+TFVF ALLE A SL ++ +L + FA +P++R P D M + KL QCE+HM+ KR N + WL+KFP+R+K+IDVISR+ FP +FA+FNL YW YL +E + E Sbjct: 112 LTEANRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEGDPVQVVKNLHLPRFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTG------------------------------VCLTFVFGALLEFALVNYASRSDIHKENMKKKRRDLEQASLDAASDLLDTDSNATFAMKPLVRHPGD--PMALEKLRQCEVHMQPPKRPNCCKTWLSKFPTRSKRIDVISRITFPLVFALFNLVYWSTYLFREEEDE 447
BLAST of glutamate-gated chloride channel vs. nr
Match: gi|929359156|ref|XP_014088909.1| (PREDICTED: glutamate-gated chloride channel isoform X2 [Bactrocera oleae]) HSP 1 Score: 441.81 bits (1135), Expect = 4.859e-151 Identity = 220/368 (59.78%), Postives = 261/368 (70.92%), Query Frame = 0 Query: 1 MTDARKVWMPDTFFRNEKEGRFHNILVPNVYIRIFPNGDVLYSIRVSLTLACPMNLKLYPLDRQQCSLRVASYGWTTGDLQYIWKTTEPVQIVKDLHLPRFTLEKYISDYCNIKTNTGEYSCLTVDLTFKREFSYYLLTIYVPCCMLVIVSWVSFWLDPNAVPARVSLGVTTLLTMSTQTASINNSLPPVAYTKAIDVWTGVSNEGSSHRPKFRRYQGNRKAKALQDGTTIVCVTFVFSALLELQWRTGA-------------------ISLFFSNVIL---TRIAFAFQPMMRRPVDSSAMMMSKLHQCEIHMKSKKRRNFLQNWLNKFPSRAKKIDVISRVVFPAIFAIFNLSYWCYYLLQEAQSE 346 +T+A +VWMPD FF NEKEG FHNI++PNVYIRIFPNG VLYSIR+SLTLACPMNLKLYPLDRQ CSLR+ASYGWTT DL ++WK +PVQ+VK+LHLPRFTLEK+++DYCN KTNTGEYSCL VDL FKREFSYYL+ IY+PCCMLVIVSWVSFWLD AVPARVSLGVTTLLTM+TQT+ IN SLPPV+YTKAIDVWTG VC+TFVF ALLE A SL ++ +L + FA +P++R P D M + KL QCE+HM+ KR N + WL+KFP+R+K+IDVISR+ FP +FA+FNL YW YL +E + E Sbjct: 113 LTEANRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEGDPVQVVKNLHLPRFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTG------------------------------VCLTFVFGALLEFALVNYASRSDIHKENLKKKRRDLEQASLDAASDLLDTDSNATFAMKPLVRHPGD--PMALEKLRQCEVHMQPPKRPNCCKTWLSKFPTRSKRIDVISRITFPLVFALFNLVYWSTYLFREEEDE 448
BLAST of glutamate-gated chloride channel vs. nr
Match: gi|499011993|ref|XP_004537182.1| (glutamate-gated chloride channel isoform X16 [Ceratitis capitata]) HSP 1 Score: 441.81 bits (1135), Expect = 5.065e-151 Identity = 220/368 (59.78%), Postives = 261/368 (70.92%), Query Frame = 0 Query: 1 MTDARKVWMPDTFFRNEKEGRFHNILVPNVYIRIFPNGDVLYSIRVSLTLACPMNLKLYPLDRQQCSLRVASYGWTTGDLQYIWKTTEPVQIVKDLHLPRFTLEKYISDYCNIKTNTGEYSCLTVDLTFKREFSYYLLTIYVPCCMLVIVSWVSFWLDPNAVPARVSLGVTTLLTMSTQTASINNSLPPVAYTKAIDVWTGVSNEGSSHRPKFRRYQGNRKAKALQDGTTIVCVTFVFSALLELQWRTGA-------------------ISLFFSNVIL---TRIAFAFQPMMRRPVDSSAMMMSKLHQCEIHMKSKKRRNFLQNWLNKFPSRAKKIDVISRVVFPAIFAIFNLSYWCYYLLQEAQSE 346 +T+A +VWMPD FF NEKEG FHNI++PNVYIRIFPNG VLYSIR+SLTLACPMNLKLYPLDRQ CSLR+ASYGWTT DL ++WK +PVQ+VK+LHLPRFTLEK+++DYCN KTNTGEYSCL VDL FKREFSYYL+ IY+PCCMLVIVSWVSFWLD AVPARVSLGVTTLLTM+TQT+ IN SLPPV+YTKAIDVWTG VC+TFVF ALLE A SL ++ +L + FA +P++R P D M + KL QCE+HM+ KR N + WL+KFP+R+K+IDVISR+ FP +FA+FNL YW YL +E + E Sbjct: 113 LTEANRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEGDPVQVVKNLHLPRFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTG------------------------------VCLTFVFGALLEFALVNYASRSDIHKENMKKKRRDLEQASLDAASDLLDTDSNATFAMKPLVRHPGD--PMALEKLRQCEVHMQPPKRPNCCKTWLSKFPTRSKRIDVISRITFPLVFALFNLVYWSTYLFREEEDE 448
BLAST of glutamate-gated chloride channel vs. nr
Match: gi|499011989|ref|XP_004537181.1| (glutamate-gated chloride channel isoform X13 [Ceratitis capitata]) HSP 1 Score: 441.81 bits (1135), Expect = 5.420e-151 Identity = 220/368 (59.78%), Postives = 261/368 (70.92%), Query Frame = 0 Query: 1 MTDARKVWMPDTFFRNEKEGRFHNILVPNVYIRIFPNGDVLYSIRVSLTLACPMNLKLYPLDRQQCSLRVASYGWTTGDLQYIWKTTEPVQIVKDLHLPRFTLEKYISDYCNIKTNTGEYSCLTVDLTFKREFSYYLLTIYVPCCMLVIVSWVSFWLDPNAVPARVSLGVTTLLTMSTQTASINNSLPPVAYTKAIDVWTGVSNEGSSHRPKFRRYQGNRKAKALQDGTTIVCVTFVFSALLELQWRTGA-------------------ISLFFSNVIL---TRIAFAFQPMMRRPVDSSAMMMSKLHQCEIHMKSKKRRNFLQNWLNKFPSRAKKIDVISRVVFPAIFAIFNLSYWCYYLLQEAQSE 346 +T+A +VWMPD FF NEKEG FHNI++PNVYIRIFPNG VLYSIR+SLTLACPMNLKLYPLDRQ CSLR+ASYGWTT DL ++WK +PVQ+VK+LHLPRFTLEK+++DYCN KTNTGEYSCL VDL FKREFSYYL+ IY+PCCMLVIVSWVSFWLD AVPARVSLGVTTLLTM+TQT+ IN SLPPV+YTKAIDVWTG VC+TFVF ALLE A SL ++ +L + FA +P++R P D M + KL QCE+HM+ KR N + WL+KFP+R+K+IDVISR+ FP +FA+FNL YW YL +E + E Sbjct: 113 LTEANRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEGDPVQVVKNLHLPRFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTG------------------------------VCLTFVFGALLEFALVNYASRSDIHKENMKKKRRDLEQASLDAASDLLDTDSNATFAMKPLVRHPGD--PMALEKLRQCEVHMQPPKRPNCCKTWLSKFPTRSKRIDVISRITFPLVFALFNLVYWSTYLFREEEDE 448
BLAST of glutamate-gated chloride channel vs. nr
Match: gi|807043632|ref|XP_012162077.1| (glutamate-gated chloride channel isoform X12 [Ceratitis capitata]) HSP 1 Score: 441.81 bits (1135), Expect = 5.430e-151 Identity = 221/373 (59.25%), Postives = 263/373 (70.51%), Query Frame = 0 Query: 1 MTDARKVWMPDTFFRNEKEGRFHNILVPNVYIRIFPNGDVLYSIRVSLTLACPMNLKLYPLDRQQCSLRVASYGWTTGDLQYIWKTTEPVQIVKDLHLPRFTLEKYISDYCNIKTNTGEYSCLTVDLTFKREFSYYLLTIYVPCCMLVIVSWVSFWLDPNAVPARVSLGVTTLLTMSTQTASINNSLPPVAYTKAIDVWTGVSNEGSSHRPKFRRYQGNRKAKALQDGTTIVCVTFVFSALLELQW-----RTG-------------------AISLFFSNVIL---TRIAFAFQPMMRRPVDSSAMMMSKLHQCEIHMKSKKRRNFLQNWLNKFPSRAKKIDVISRVVFPAIFAIFNLSYWCYYLLQEAQSE 346 +T+A +VWMPD FF NEKEG FHNI++PNVYIRIFPNG VLYSIR+SLTLACPMNLKLYPLDRQ CSLR+ASYGWTT DL ++WK +PVQ+VK+LHLPRFTLEK+++DYCN KTNTGEYSCL VDL FKREFSYYL+ IY+PCCMLVIVSWVSFWLD AVPARVSLGVTTLLTM+TQT+ IN SLPPV+YTKAIDVWTG VC+TFVF ALLE R+G SL ++ +L + FA +P++R P D M + KL QCE+HM+ KR N + WL+KFP+R+K+IDVISR+ FP +FA+FNL YW YL +E + E Sbjct: 112 LTEANRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEGDPVQVVKNLHLPRFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTG------------------------------VCLTFVFGALLEFALVNYASRSGLNKANIHKENMKKKRRDLEQASLDAASDLLDTDSNATFAMKPLVRHPGD--PMALEKLRQCEVHMQPPKRPNCCKTWLSKFPTRSKRIDVISRITFPLVFALFNLVYWSTYLFREEEDE 452
BLAST of glutamate-gated chloride channel vs. nr
Match: gi|807043639|ref|XP_012162080.1| (glutamate-gated chloride channel isoform X14 [Ceratitis capitata]) HSP 1 Score: 441.81 bits (1135), Expect = 5.844e-151 Identity = 220/368 (59.78%), Postives = 261/368 (70.92%), Query Frame = 0 Query: 1 MTDARKVWMPDTFFRNEKEGRFHNILVPNVYIRIFPNGDVLYSIRVSLTLACPMNLKLYPLDRQQCSLRVASYGWTTGDLQYIWKTTEPVQIVKDLHLPRFTLEKYISDYCNIKTNTGEYSCLTVDLTFKREFSYYLLTIYVPCCMLVIVSWVSFWLDPNAVPARVSLGVTTLLTMSTQTASINNSLPPVAYTKAIDVWTGVSNEGSSHRPKFRRYQGNRKAKALQDGTTIVCVTFVFSALLELQWRTGA-------------------ISLFFSNVIL---TRIAFAFQPMMRRPVDSSAMMMSKLHQCEIHMKSKKRRNFLQNWLNKFPSRAKKIDVISRVVFPAIFAIFNLSYWCYYLLQEAQSE 346 +T+A +VWMPD FF NEKEG FHNI++PNVYIRIFPNG VLYSIR+SLTLACPMNLKLYPLDRQ CSLR+ASYGWTT DL ++WK +PVQ+VK+LHLPRFTLEK+++DYCN KTNTGEYSCL VDL FKREFSYYL+ IY+PCCMLVIVSWVSFWLD AVPARVSLGVTTLLTM+TQT+ IN SLPPV+YTKAIDVWTG VC+TFVF ALLE A SL ++ +L + FA +P++R P D M + KL QCE+HM+ KR N + WL+KFP+R+K+IDVISR+ FP +FA+FNL YW YL +E + E Sbjct: 112 LTEANRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEGDPVQVVKNLHLPRFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTG------------------------------VCLTFVFGALLEFALVNYASRSDIHKENMKKKRRDLEQASLDAASDLLDTDSNATFAMKPLVRHPGD--PMALEKLRQCEVHMQPPKRPNCCKTWLSKFPTRSKRIDVISRITFPLVFALFNLVYWSTYLFREEEDE 447
BLAST of glutamate-gated chloride channel vs. nr
Match: gi|499011997|ref|XP_004537183.1| (glutamate-gated chloride channel isoform X17 [Ceratitis capitata]) HSP 1 Score: 441.425 bits (1134), Expect = 6.433e-151 Identity = 220/368 (59.78%), Postives = 261/368 (70.92%), Query Frame = 0 Query: 1 MTDARKVWMPDTFFRNEKEGRFHNILVPNVYIRIFPNGDVLYSIRVSLTLACPMNLKLYPLDRQQCSLRVASYGWTTGDLQYIWKTTEPVQIVKDLHLPRFTLEKYISDYCNIKTNTGEYSCLTVDLTFKREFSYYLLTIYVPCCMLVIVSWVSFWLDPNAVPARVSLGVTTLLTMSTQTASINNSLPPVAYTKAIDVWTGVSNEGSSHRPKFRRYQGNRKAKALQDGTTIVCVTFVFSALLELQWRTGA-------------------ISLFFSNVIL---TRIAFAFQPMMRRPVDSSAMMMSKLHQCEIHMKSKKRRNFLQNWLNKFPSRAKKIDVISRVVFPAIFAIFNLSYWCYYLLQEAQSE 346 +T+A +VWMPD FF NEKEG FHNI++PNVYIRIFPNG VLYSIR+SLTLACPMNLKLYPLDRQ CSLR+ASYGWTT DL ++WK +PVQ+VK+LHLPRFTLEK+++DYCN KTNTGEYSCL VDL FKREFSYYL+ IY+PCCMLVIVSWVSFWLD AVPARVSLGVTTLLTM+TQT+ IN SLPPV+YTKAIDVWTG VC+TFVF ALLE A SL ++ +L + FA +P++R P D M + KL QCE+HM+ KR N + WL+KFP+R+K+IDVISR+ FP +FA+FNL YW YL +E + E Sbjct: 112 LTEANRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEGDPVQVVKNLHLPRFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTG------------------------------VCLTFVFGALLEFALVNYASRSDIHKENMKKKRRDLEQASLDAASDLLDTDSNATFAMKPLVRHPGD--PMALEKLRQCEVHMQPPKRPNCCKTWLSKFPTRSKRIDVISRITFPLVFALFNLVYWSTYLFREEEDE 447
BLAST of glutamate-gated chloride channel vs. nr
Match: gi|1135080267|ref|XP_019892422.1| (PREDICTED: glutamate-gated chloride channel isoform X2 [Musca domestica]) HSP 1 Score: 441.81 bits (1135), Expect = 7.313e-151 Identity = 220/373 (58.98%), Postives = 265/373 (71.05%), Query Frame = 0 Query: 1 MTDARKVWMPDTFFRNEKEGRFHNILVPNVYIRIFPNGDVLYSIRVSLTLACPMNLKLYPLDRQQCSLRVASYGWTTGDLQYIWKTTEPVQIVKDLHLPRFTLEKYISDYCNIKTNTGEYSCLTVDLTFKREFSYYLLTIYVPCCMLVIVSWVSFWLDPNAVPARVSLGVTTLLTMSTQTASINNSLPPVAYTKAIDVWTGVSNEGSSHRPKFRRYQGNRKAKALQDGTTIVCVTFVFSALLELQW-----RTGA-------------------ISLFFSNVIL---TRIAFAFQPMMRRPVDSSAMMMSKLHQCEIHMKSKKRRNFLQNWLNKFPSRAKKIDVISRVVFPAIFAIFNLSYWCYYLLQEAQSE 346 +T+A +VWMPD FF NEKEG FHNI++PNVYIRIFPNG VLYSIR+SLTLACPMNLKLYPLDRQ CSLR+ASYGWTT DL ++WK +PVQ+VK+LHLPRFTLEK+++DYCN KTNTGEYSCL VDL FKREFSYYL+ IY+PCCMLVIVSWVSFWLD AVPARVSLGVTTLLTM+TQT+ IN SLPPV+YTKAIDVWTG VC+TFVF ALLE R+G+ S+ ++ +L + FA +P++R P D A + KL QCE+HM++ KR N + WL+KFP+R+K+IDVISR+ FP +FA+FNL YW YL +E + E Sbjct: 113 LTEANRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEGDPVQVVKNLHLPRFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTG------------------------------VCLTFVFGALLEFALVNYASRSGSNKANMHKENMKKKRRDLEQASIDAASDLLDTDSNATFAMKPLVRHPGDPLA--LEKLRQCEVHMQAPKRPNCCKTWLSKFPTRSKRIDVISRITFPLVFALFNLVYWSTYLFREEEDE 453
BLAST of glutamate-gated chloride channel vs. nr
Match: gi|807043623|ref|XP_012162074.1| (glutamate-gated chloride channel isoform X8 [Ceratitis capitata]) HSP 1 Score: 441.425 bits (1134), Expect = 8.520e-151 Identity = 221/373 (59.25%), Postives = 263/373 (70.51%), Query Frame = 0 Query: 1 MTDARKVWMPDTFFRNEKEGRFHNILVPNVYIRIFPNGDVLYSIRVSLTLACPMNLKLYPLDRQQCSLRVASYGWTTGDLQYIWKTTEPVQIVKDLHLPRFTLEKYISDYCNIKTNTGEYSCLTVDLTFKREFSYYLLTIYVPCCMLVIVSWVSFWLDPNAVPARVSLGVTTLLTMSTQTASINNSLPPVAYTKAIDVWTGVSNEGSSHRPKFRRYQGNRKAKALQDGTTIVCVTFVFSALLELQW-----RTG-------------------AISLFFSNVIL---TRIAFAFQPMMRRPVDSSAMMMSKLHQCEIHMKSKKRRNFLQNWLNKFPSRAKKIDVISRVVFPAIFAIFNLSYWCYYLLQEAQSE 346 +T+A +VWMPD FF NEKEG FHNI++PNVYIRIFPNG VLYSIR+SLTLACPMNLKLYPLDRQ CSLR+ASYGWTT DL ++WK +PVQ+VK+LHLPRFTLEK+++DYCN KTNTGEYSCL VDL FKREFSYYL+ IY+PCCMLVIVSWVSFWLD AVPARVSLGVTTLLTM+TQT+ IN SLPPV+YTKAIDVWTG VC+TFVF ALLE R+G SL ++ +L + FA +P++R P D M + KL QCE+HM+ KR N + WL+KFP+R+K+IDVISR+ FP +FA+FNL YW YL +E + E Sbjct: 113 LTEANRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEGDPVQVVKNLHLPRFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTG------------------------------VCLTFVFGALLEFALVNYASRSGLNKANIHKENMKKKRRDLEQASLDAASDLLDTDSNATFAMKPLVRHPGD--PMALEKLRQCEVHMQPPKRPNCCKTWLSKFPTRSKRIDVISRITFPLVFALFNLVYWSTYLFREEEDE 453 The following BLAST results are available for this feature:
BLAST of glutamate-gated chloride channel vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 25
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BLAST of glutamate-gated chloride channel vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of glutamate-gated chloride channel vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
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The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold807_size94382:67718..81514+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold807_size94382-snap-gene-0.18 ID=maker-scaffold807_size94382-snap-gene-0.18|Name=glutamate-gated chloride channel|organism=Tigriopus kingsejongensis|type=gene|length=13797bp|location=Sequence derived from alignment at scaffold807_size94382:67718..81514+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'glutamate-gated chloride channel' has the following synonyms
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