abc transporter permease atp-binding protein, maker-scaffold8083_size2872-snap-gene-0.2 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of abc transporter permease atp-binding protein vs. L. salmonis genes
Match: EMLSAG00000007660 (supercontig:LSalAtl2s:LSalAtl2s445:12562:17493:1 gene:EMLSAG00000007660 transcript:EMLSAT00000007660 description:"maker-LSalAtl2s445-augustus-gene-0.18") HSP 1 Score: 253.062 bits (645), Expect = 1.389e-73 Identity = 167/520 (32.12%), Postives = 280/520 (53.85%), Query Frame = 0 Query: 101 ARIGEGVIYDLRSALFDHVQRMPIAFFTRTQTGTLTNRLNSDVIGAQRALTATLGTVVSNVITLVTTLIAMFIFEWRLTLLALILTPFFVMPYRRIGSIQQGITRESMDLNAQMNSTMTERFNVSGALLTKLFGRHDDEVRLFSSRAERVRD----IGIRSALFTRAFMIMLG--LLGSIGTALVYGLGGLMVINGDFSVGDLAAMGLLVGRIYQPLTGLTNARIDVLTALVSFDRVFEVLDAPSPLADAPDAIELTDPK--GRIEFRDVIFRYPLSNETIIPTLETPSSSLSDEDARPVIEHLDLVIEPGTLVAIVGPSGAGKTTITNLVPRLYDVTDG-AIFVDGHDVRSYTQSSLR-QAIGVVVQDPHLFHESIADNLRYAKPDATEADMIAACKAAQIHEVIAKLPSAYDTVVGERGYRFSGGEKQRLSIARMLLKDPAVVILDEATSHLDSENESLVQTALAEALSDRTALVIAHRLSTITEADLIVVLDEGRVAQSGTHDELLAEGGLYSDLYQ 610 A +GE + LR LF+ + IAFF +TG + +RL++DV + + + + + +++M++ ++T ++ P ++ IGS + +++++ A+ + E +S + F D E+ L+S ++ RD +G+ +F A L +LG+I GG ++ + + + G L + + V I + +T ++ ++ + S R+FE ++ PL +++ G +EF+++ F YP E + V++ L I P VA+VG SG GKTTI L+ R YD+ G ++ +DG ++R S LR AIG + Q+P LF S+ +N+RY +P+AT+ ++ A KAA + + + P Y T++GERG SGG+KQR++IAR LLK+P ++ILDEATS LD+E+E +VQ AL + RT+LVIAHRLSTI AD+I V+D+G +A+ GTH L +GG+YS L + Sbjct: 178 ACLGERMAASLRKDLFNSIICQDIAFFDEHKTGEIVSRLSADVQEFKSSFKLVISQGLRSSAQASGCIVSMYMISPQMTSAMGVIVPTVILGGTYIGSYLRVLSKKAQAQVAKATAVGEE--CISNIRTVRGFAMEDAEMELYSREVDKTRDFNEALGLGIGVFQGASNFFLNSIVLGTIT------YGGYLMSDDNLNPGQLMSFLVSVQTIQRSITQVSLLFGHLVKGMASGSRIFEYIEK-VPLIPISGGVKIPYHSFFGDVEFKNITFSYPTRPE------------------QAVLKDFSLRIPPSKTVALVGTSGGGKTTIAALLERFYDINGGGSLEIDGINIRDLDPSWLRGSAIGYINQEPVLFATSVIENIRYGRPNATDNEVYEAAKAAHVDDFVRTFPDGYSTILGERGVTVSGGQKQRIAIARALLKNPPILILDEATSALDAESERIVQEALDKLSKGRTSLVIAHRLSTIKNADVIAVIDKGVMAEIGTHAALKRKGGIYSRLIE 670
BLAST of abc transporter permease atp-binding protein vs. L. salmonis genes
Match: EMLSAG00000010048 (supercontig:LSalAtl2s:LSalAtl2s662:116216:125875:1 gene:EMLSAG00000010048 transcript:EMLSAT00000010048 description:"snap_masked-LSalAtl2s662-processed-gene-1.13") HSP 1 Score: 208.379 bits (529), Expect = 6.301e-57 Identity = 150/498 (30.12%), Postives = 246/498 (49.40%), Query Frame = 0 Query: 133 GTLTNR-LNSDVIGAQRALTATLGTVVSNVITLVTTLIAMFIFEWRLTLLALILTPFFVMPYRRIGSIQQGITRESMDLNAQMNSTMTERFNVSGALLTKLFGRHDDEVRLFSSRAERVRDIGIRSALFTRAFMIMLGLL--GSIGTALVYGLGGLMVINGDFSVGDLAAMGLLVGR------IYQPLTGLTN-----ARIDVLT-ALVSFDRVFEVLDAPSPLADAPDAIELTDPK-----GRIEFRDVIFRYPLSNETIIPTLETPSSSLSDEDARPVIEHLDLVIEPGTLVAIVGPSGAGKTTITNLVPRLYDVTDGAIFVDGHDVRSYTQSSLRQAIGVVVQDPHLFHESIADNLRYAKPDATEADMIA-ACKAAQIHEVIAKLPSAYDTVVGERGYRFSGGEKQRLSIARMLLKDPAVVILDEATSHLDSENESLVQTALAEALSDRTALVIAHRLSTITEADLIVVLDEGRVAQSGTHDELLA-EGGLYSDL 608 GTL R L+ D+ Q + +G + + +++LI FI W LTL+ L P ++ I Q +T + + ++ S E F+ +++ F + E++ + + GI L T ++ + S A YG+ L++ + + + + G + L G N ++ A + VF+++ + + D ++ K GRI F++V F YP PT++ V+ L PG +A+VGPSG GK+T+ L+ R YD + G + +DG D+ + LR IG+V Q+P LF SI +N+ MI CKAA ++ I +LP YDT+VGE+G SGG+KQR++IAR L+++P++++LDEA+S LDS++E +VQ+AL +A RT +++AHRLSTI AD I+V+ +G GTH+ L + + GLY L Sbjct: 4 GTLLQRSLSMDLNKLQEGIGEKIGLFIFFITIFISSLITAFIHGWELTLVILSAMPILMIAVGIIAKSQTALTVKESNAYSKAGSVAEEAFSSIKTVMS--FQGQNTEIQRYKENLSEAQKTGILRGLLTGIGGGLMWFIIYSSYAIAFWYGVK-LILDDRESCIASPTDCQIRYGPSNLLIVFFSVLMGAMNIGQASPYVEAFAIARGAASSVFQIIQSTPAIKSDYDHLQRQQDKAPPFTGRITFKNVHFEYPSR-----PTVK-------------VLSGLSFEASPGKTLALVGPSGCGKSTVIQLIQRFYDPSFGVVSIDGEDITTLDPHWLRSHIGIVGQEPVLFEYSIKENITMGLQGEISEKMIDDTCKAANAYDFIQRLPKKYDTIVGEKGALLSGGQKQRIAIARALIRNPSILLLDEASSALDSQSEFIVQSALDKARKGRTTIIVAHRLSTIRSADAILVMKDGYRVDYGTHESLKSNKTGLYCSL 480
BLAST of abc transporter permease atp-binding protein vs. L. salmonis genes
Match: EMLSAG00000003104 (supercontig:LSalAtl2s:LSalAtl2s174:364234:370462:-1 gene:EMLSAG00000003104 transcript:EMLSAT00000003104 description:"maker-LSalAtl2s174-augustus-gene-3.18") HSP 1 Score: 198.749 bits (504), Expect = 5.249e-53 Identity = 120/352 (34.09%), Postives = 184/352 (52.27%), Query Frame = 0 Query: 287 VINGDFSVGDLAAMGLLVGRIYQPLTGLTNARIDVLTALVSFDRVFEVLDAPSPLADAPDAIELT----DPKGRIEFRDVIFRYPLSNETIIPTLETPSSSLSDEDARPVIEHLDLVIEPGTLVAIVGPSGAGKTTITNLVPRLYDVTDGAIFVDGHDVRSYTQSSLRQAIGVVVQDPHLFHESIADNLRYAKPDATEADMIAACKAAQIHEVIAKLPSAYDTVVGERGYRFSGGEKQRLSIARMLLKDPAVVILDEATSHLDSENESLVQTALAEALSDRTALVIAHRLSTITEADLIVVLDEGRVAQSGTHDELLAEGGLYSDLYQLPNRTDR------PHHGDLRADTA 628 + NG +VGDL + L+ ++ PL L + ++ +L+ +F+++ PS + + A E+ I F DV F Y + + + L +E G +AIVG SG+GK+T+ L+ R Y+ G+I + +++ T SLR+ I +V QD LF+++I N++Y + ++ D+ K A+I I P Y T VGERG + SGGEKQR++IAR LKD ++I DEATS LDS E+++ AL S +TA++IAHRLST+ AD I VL G+V + GTH+ELL + LPN R H ++ D+A Sbjct: 290 ISNGALTVGDLIMVNGLLFQLSLPLNFLGSVYREIRQSLIDMQVMFQLMATPSKITSSKGATEINFINNMEDASITFDDVKFGYNID--------------------KNIANGLSFSVESGKTIAIVGESGSGKSTLVRLLYRFYEPQLGSIKIGNYNINEVTLDSLRRQISIVPQDCVLFNDTIFHNIKYGNLNCSDEDVYKVAKLAEIDNAIRSWPQGYLTQVGERGLKLSGGEKQRVAIARAALKDSPIIIFDEATSSLDSITETMIMKALKRVTSGKTAIIIAHRLSTVVHADEIFVLSNGKVIERGTHEELL-------NTLTLPNGRSRRFVDLISHKDNILMDSA 614
BLAST of abc transporter permease atp-binding protein vs. L. salmonis genes
Match: EMLSAG00000004490 (supercontig:LSalAtl2s:LSalAtl2s2344:77714:79426:-1 gene:EMLSAG00000004490 transcript:EMLSAT00000004490 description:"maker-LSalAtl2s2344-augustus-gene-0.12") HSP 1 Score: 180.259 bits (456), Expect = 3.145e-49 Identity = 147/508 (28.94%), Postives = 237/508 (46.65%), Query Frame = 0 Query: 56 PVLFGRIID-------QAIPDEDRR--------------LLVIFAIFIVGSSLLEGVLALGERFLSARIGEGVIYDLRSALFDHVQRMPIAFFTRTQTGTLTNRLNSDVIGAQRALTATLGTVVSNVITLVTTLIAMFIFEWRLTLLALILTPFFVMPYRRIGSIQQGITRESMDLNAQMNSTMTERFNVSGALLTKLFGRHDDEVRLFSSRAERVRDIGIRSALFTRAFMIMLGLLGSIGTALVYGLGGLMVINGDFSVGDLAAMGLLVGRIYQPLTGLTNARIDVLTALVSFDRVFEVLDAPSPLADAPDAIELTDPKGRIEFRDVIFRYPLSNETIIPTLETPSSSLSDEDARPVIEHLDLVIEPGTLVAIVGPSGAGKTTITNLVPRLYDVTDGAIFVDGHDVRSYTQSSLRQAIGVVVQDPHLFHESIADNLRYAKPDATE-ADMIAACKAAQIHEVIAKLPSAYDTVVGERGYRFSGGEKQRLSIARMLLKDPAVVILDEAT 541 P G+IID + DE+++ L+V+F I + G +L G+ + +RS LF + + AFF +TG L NRL+SD + +ALT+ + + + + I + M +L L+ L + P +G + I+ E + A ER ++ + FG+ E + + V D G++ AL F M G G++ V GG +V +VG+L + L G + L G+++ +++ AL + R++E++D + + I G I F V F YP P S+ D L+L IE ++AIVG K+T+T+L+ RLYD G + +DG D+R + LR IG+V+Q+P LF +I +N+ Y E ++++A K + H+ I P YDT+VGERG SGG+KQR++IA +LK+P +ILDEAT Sbjct: 1 PYAIGKIIDIIYELGDRNNSDEEKKKASTRSRLNSLCTALVVVFGI--------GAICNFGRVYLIQLSGQRITARIRSRLFSSITKQETAFFDTNKTGELVNRLSSDSMLVSQALTSQISSGMRSSIMALAGGGMMLFMSPQLALVGLSVVPPVAGWAVWMGKKVKNISHEYQNTLADATHLAQER--IANIRTVRAFGKEVQESMAYDEKMSLVLDKGVKEALIQAKFYGMTGXTGNLIILSVMFYGGFLVTQDVITVGNLTSFILYSGYVGIGLNGVSSFYAEIMKALGAATRIWEIMDRTTHMPLDTGLILPMPLNGHITFEKVGFSYP----------SRPDHSIFD--------GLNLNIESKQILAIVGS----KSTLTSLLLRLYDPNMGRVCIDGTDIRELNTTWLRNQIGIVMQEPVLFSGTIKENILYGTEGKIEHEEIVSAAKESNAHDFIMNFPDRYDTLVGERGVLLSGGQKQRVAIAXAILKNPQXLILDEAT 476
BLAST of abc transporter permease atp-binding protein vs. L. salmonis genes
Match: EMLSAG00000002221 (supercontig:LSalAtl2s:LSalAtl2s1420:21426:31801:1 gene:EMLSAG00000002221 transcript:EMLSAT00000002221 description:"maker-LSalAtl2s1420-augustus-gene-0.12") HSP 1 Score: 152.91 bits (385), Expect = 4.996e-38 Identity = 145/555 (26.13%), Postives = 248/555 (44.68%), Query Frame = 0 Query: 63 IDQAIPDEDRRLLVIFAIFIVGSSLLEGVLALGERFLSARIGEGVIYDLRSALFDHVQRMPIAFFTRTQTGTLTNRLNSDVIGAQRALTATLGTVVSNVITLVTTLIAMFIFEWRLTLLALILTPFFVMP-------YRRIGSIQQGITRESMDLNAQMNSTMTERFN--VSGALLTKLFGRHDDEVRLFSSRAERVRDIGIRSALFTRAFMIMLGLLGSIGTALVYGLGGLMVINGDFSVGDLAAMGLLVG-RIYQPLTGLTNARIDVLTALVSFDRVFEVLDAPSPLADAPDAIELTDP------KGRIEFRDVIFRYPLSNETIIPTLETPSSSLSDEDARPVIEHLDLVIEPGTLVAIVGPSGAGKTTITNLVPRLYDVTDGAIFVDGHDVRSYTQSSLRQAIGVVVQDPHLFHESIADNLRYAKPDATEADMIAACKAAQIHEVIAKLPSAYDTVVGERGYRFSGGEKQRLSIARMLLKDPAVVILDEATSHLDSENESLVQTALAEALSDRTALVIAHRLSTITEADLIVVLDEGRVAQSGTHDELLAE 601 I+Q I D L I+ + +G + V+ +G F+ E L + + + + + P++FF T G + NRL D+ + L +S + ++++LI + ++ TP F++P Y I I +R+ L + S + F+ VSGA + +G+ + S+ + + + + R + L ++G++ +V+ L V+ D L + + + L L +V T +V+ +R+ E A +AP IE T P KG I F++ RY E V++++ L IE G + IVG +GAGK++ T + R+ + G I +DG D+ LR I ++ QDP LF S+ NL + E +++ A + + I L + V E G S G++Q + +AR LL+ V+ILDEAT+ +D E ++L+Q + D T + IAHRL+TI + I+VL G + GT ELLA+ Sbjct: 1031 INQDIMDXQVYYLSIYGGYCLGQGI---VVVMGFVFMYLACMEAA-QRLHNQMLESILKSPMSFFDTTPQGRILNRLGKDLDVLDSVMPMVLRGWISCFLGVLSSLI-----------VVMVTTPVFIIPASLIIICYFFIQRIYVATSRQLKRLESSSRSPIXSFFSETVSGAATIRAYGQSSTFISESESKVDDNQKANFPATVSNRWLAVRLEVVGNL---IVFTAALLAVLGRDSLSPGLVGLSVSYALAVTASLNWLVRMASEVETNIVAVERIQEYTKAEK---EAPWIIEDTKPDEDWPRKGEISFKNYSTRY-------------------REGLDYVLKNVSLDIEGGEKIGIVGRTGAGKSSFTLSMFRIIEPVTGNIIIDGVDITKLGLHQLRSRITIIPQDPVLFSGSLRRNLD-PLDEYNETNIMEAISHSHLKPFIDSLKDGLEYHVSEGGENLSLGQRQLICLARALLRRTRVLILDEATAAVDLETDNLIQKTIRSEFKDSTVITIAHRLNTIMDYSKILVLKNGERVEYGTVAELLAD 1544 HSP 2 Score: 102.834 bits (255), Expect = 1.902e-22 Identity = 132/588 (22.45%), Postives = 255/588 (43.37%), Query Frame = 0 Query: 51 LGLVPPVLFGRIIDQAIPDEDRRLLVIFAIFIVGSSLLEGVLALGERFLSARI-GEGVIYDLRSALFDHVQRMPIAFFTRTQTGTLTNRLNSDVIGAQRA--LTATLGTVVSNVITLVTTLIAMFIFEWRL--------TLLALILTPFFVMPYRRIGSIQQGITRESMDLNAQMNSTMTERFNVSGALLTKLFGRHDDEVRLFSS-RAERVRDIGIRSALFTRAFMIMLGLLGSIGTALVYGLGGLMVINGDFSV-----------GDLAAMGLLVGRIYQ-PLTGLTNARIDVLTALVSFDRVFEVLDAPSPLADAPDA-IELTDPKGRIEFRDVIFRYPLSNETIIPTLETPSSSLSDEDARPVIEHLDLVIEPGTLVAIVGPSGAGKTTITNLVPRLYDVTDGAIFVDGHDVRSYTQSSLRQAIGVVVQDPHLFHESIADNLRYAKP-DATEADMIAACKAAQIHEVIAKLPSAYDTVVGERGYRFSGGEKQRLSIARMLLKDPAVVILDEATSHLDSE-NESLVQTALAEA---LSDRTALVIAHRLSTITEADLIVVLDEGRVAQSGTHDELLAEGGLYSDL 608 L VPP++ RII + E+ +++A+ + SS + G L L + F + G + L S ++ R+P + TG + N ++ D AQ+ L + TV S + IA+++ W+ L+ ++L PF R ++Q +E + +N V G + KL+ + + S+ R++ V+ + +G L + G + ++ +V F+ + A + L + I + PL+ L ++ A VS R+ + +++ +A + D K I ++ SDED + ++ + L IE G+LVA+VG G+GK+++ + + D G I V G +I Q + + S+ +N+ + K D + I +A + + LP +T +GE+G SGG+KQR+S+AR + + +LD+ S +DS + + ++ + L D+T +++ H ++ + D I+V+ +GRV++ GT+ ELL + G +++ Sbjct: 332 LNFVPPLILKRIIKFSTNQEELWKGILYAVILFASSTV-GSLVLSKFFYKMYVVGMKIKTSLISTIYRKALRVPTSTKKNISTGEIVNLMSVD---AQKIVDLMPYINTVWSAPFQIT---IAIYLL-WQTLGPSVLAGVLVMILLIPFNGFIASRTKTLQTNQMKEKDERIKLLNEV------VQGIKIVKLYAWEQSFLDIISNVRSKEVK------------ILTHIGYLQA-GNSFIWTCAPFLVSLVTFATFILSSPENVLDSEKAFVCLTLFNILRFPLSMLPMIIGSMVLAGVSIKRINKFMNSEEIDEEAVEKKTAYPDDKFAINLEKACLKWE-----------------SDED-KNILSDVSLDIEVGSLVAVVGTVGSGKSSLLSAILGEMDKVSGLITVRG-------------SIAYGAQQAWVLNTSLKNNILFNKSYDGDKYTRIV--EACALKSDLDMLPGGDETEIGEKGINLSGGQKQRVSLARAVYSGSDIYLLDDPLSAVDSHVGKHIYDNVISSSSGILKDKTRVMVTHGVTYLPFTDKIIVMKDGRVSEIGTYKELLRQKGAFAEF 859
BLAST of abc transporter permease atp-binding protein vs. L. salmonis genes
Match: EMLSAG00000001655 (supercontig:LSalAtl2s:LSalAtl2s128:1836948:1854487:1 gene:EMLSAG00000001655 transcript:EMLSAT00000001655 description:"augustus_masked-LSalAtl2s128-processed-gene-18.4") HSP 1 Score: 141.354 bits (355), Expect = 1.672e-34 Identity = 142/549 (25.87%), Postives = 249/549 (45.36%), Query Frame = 0 Query: 84 GSSLLEGVLALGERFLSARIG---EGVIYDLRSALFDHVQRMPIAFFTRTQTGTLTNRLNSDVIGAQRALTATLGTVVSNVITLV-TTLIAMFIFEWRLTLLALILTPFFVMPYRRIGSIQQGITRESMDLNAQMNSTMTERFN--------VSGALLTKLFGRHDDEVRLFSSRAERVRDIGIRSALFTRAFM--IMLGLLGSIGTALVYGLGGLMVINGDFSVGDLAAMGLLVG-------RIYQPLTGLTNARIDVLT---ALVSFDRVFE-----VLDAPSPLADAPDAIELTDPKGRIEFRDVIFRYPLSNETIIPTLETPSSSLSDEDARP-VIEHLDLVIEPGTLVAIVGPSGAGKTTITNLVPRLYDVTDGAIFVDGHDVRSYTQSSLRQAIGVVVQDPHLFHESIADNLRYAKPDATEAD--MIAACKAAQIHEVIAKL-PSAYDTVVGERGYRFSGGEKQRLSIARMLLKDPAVVILDEATSHLDSENESLVQTALAEALSDRTALVIAHRLSTITEADLIVVLDEGRVAQSGTHDELL 599 G ++ +L L FL A G +I+DL L + R I FF T G + NR +SD +L L +S + + L+ ++ W L ++L P + Y + G +R+ +++ S + E FN + + ++ F ++E+ + +A R A F+ + I L L+GSI +V+ + + VIN F D +GL V R+ + + T +++ A DR++E VL+ P + P+ +G +EF+D+ RY +D P V+ ++ +P + IVG +GAGK+++ + RL + G I VDG +R R+ V+ QDP +F +I NL P A +D + + K + ++ +I S DT++G+ G S G+KQ L +AR ++ VV +DEAT+ +D E + L++ L A +D+T + IAHR+ T+ +D I V+ G++ + G ++L+ Sbjct: 947 GLAVFHTILTLIRAFLFAYGGIHAAKIIHDL---LLGVLLRAKIYFFDSTPAGRILNRFSSDTYAIDDSLPFILNIFLSQIFGVFGRVLVCVYAVPWIL----IVLLPLGLFYYEIQCKYRPG-SRDLKRISSVSLSPIYEHFNETVHGLKIIRASKASQRFLLENEELVECNQKA--------RYAAFSASLWLEIRLQLIGSI---VVFSIALISVIN--FESVDAGLVGLAVSYALGMTXRLAEVVVSFTETEKELVAVERAYDYIDRIYEESYSGVLNMP---YNWPN-------QGVVEFKDIRLRY--------------------KDHLPYVLNKVNFKTKPKEKIGIVGRTGAGKSSLIAALFRLSSFSHGEIMVDGIRIRLLPLIDFRRQFAVIPQDPFIFSGTIRQNL---DPYAQHSDQELWDSIKLSYLYNIIYSFGSSGLDTLIGDGGKSLSIGQKQLLCLARAIITSAKVVFIDEATASVDKETDRLIRNVLKTAFNDKTVITIAHRIETVLNSDRIFVMSNGQIIEEGKPEDLI 1441 HSP 2 Score: 75.0998 bits (183), Expect = 5.268e-14 Identity = 73/292 (25.00%), Postives = 124/292 (42.47%), Query Frame = 0 Query: 311 LTGLTNARIDVLTAL----VSFDRVFEVLDAPSPLADAPDAIELTDPKGRIEFRDVIFRYPLSNETIIPTLETPSSSLSDEDARPVIEHLDLVIEPGTLVAIVGPSGAGKTTITNLVPRLYDVTDGAIFVDGHDVRSYTQSSLRQAIGVVVQDPHLFHESIADNLRYAKPDATEADMIAACKAAQIHEVIAKLPSAYDTVVGERGYRFSGGEKQRLSIARMLLKDPAVVILDEATSHLDSENESLVQT-ALAEALSDRTALVIAHRLSTITEADLIVVLDEGRV--AQSGTH 595 L+G NA V+ L VS R+ L PS + K E++D + ET IP ++ +S + ++D+ I+ V ++GP G+GKTT N + + G I V D S I V Q P + ++SI DN+ + + KA + L T+ GE+G SGG+K R+++AR + +D + ++D+ S LD V T + L +T ++ H I +A++++ + +G + TH Sbjct: 574 LSGPFNAFPFVINGLIEANVSIKRLARFLSLPS----------INRIKYFTEYKDENTKASKEIETKIPDIQIMEASFGFTKDCFTLRNIDVSIKRQEFVGVLGPVGSGKTTFLNAILGELEKQSGKISV--RDPLS--------GIAYVQQVPWIQNKSIRDNILFGEM-YIHGKYTKVIKACCLDHDFKHLHRGDHTIAGEKGAALSGGQKARIALARAIYQDKDIYLIDDVFSSLDVNVGYKVYTEVMLNLLKRKTRILCTHNPQYINDANIVIKIKDGEFESVKQSTH 844
BLAST of abc transporter permease atp-binding protein vs. L. salmonis genes
Match: EMLSAG00000003611 (supercontig:LSalAtl2s:LSalAtl2s197:49356:53594:-1 gene:EMLSAG00000003611 transcript:EMLSAT00000003611 description:"augustus_masked-LSalAtl2s197-processed-gene-0.4") HSP 1 Score: 140.969 bits (354), Expect = 2.299e-34 Identity = 125/503 (24.85%), Postives = 232/503 (46.12%), Query Frame = 0 Query: 111 LRSALFDHVQRMPIAFFTRTQTGTLTNRLNSDV------IGAQ-RALTATLGTVVSNVITLVTTLIAMFIFEWRLTLLALILTPFFVMPYRRIGSIQQGITRESMDLNAQMNSTMTERFNVSGALLTKLFGRHDDEVRLFSSRAERVRDIGIRSALFTRAFMIMLGLLGSIGTALVYGLGGLMVIN----GDFSVGDLAAMGLLVGRIYQPLTGLTNARIDVLTALVSFDRVFEV--LDAPSPLADAPDAIELTDPKGRIEFRDVIFRYPLSNETIIPTLETPSSSLSDEDARPVIEHLDLVIEPGTLVAIVGPSGAGKTTITNLVPRLYDVTDGAIFVDGHDVRSYTQSSLRQAIGVVVQDPHLFHESIADNLRYAKPDA--TEADMIAACKAAQIHEVIAKLPSAYDTVVGERGYRFSGGEKQRLSIARMLLKDPAVVILDEATSHLDSENESLVQTALAEALSDRTALVIAHRLSTITEADLIVVLDEGRVAQSGTHDEL 598 + + +D + R PI+FF T G + NR + D+ +G+ R L + VI +V+ L +F +L+ +++ +V R++ +Q +TR + + S +E N G + +G + ++ + + S + R + L +IG ++G L + N G VG + + L++ Q L L ++ T +V+ +R+ E LD D +G++EF++ RY +++ V++ ++ I G V IVG +GAGK++++ + R+ + +G I +DG D+ + LR+++ V+ Q+P LF ++ NL P+ ++ D+ + + E I L + + E G S G++Q + +AR LL+ ++ILDEAT+ +D E + +Q + T L IAHRL TI + D I+VLD+G V + G+ +EL Sbjct: 915 IHNQTYDRIMRAPISFFDSTPQGRILNRFSKDISICDNILGSNIRQWLXCLFXFLGIVILIVSVLPLFLLFALPTSLVFILIQNIYVASSRQLKRLQ-SVTR------SPIYSHFSESLN--GLSSIRAYGAQSKFILESINKIDTNQRCNYPSIIANRWLAMRLE---TIGNLCIFGXAILTMTNPELVGPGKVGLVISYALILT---QNLNWLXRQTSEIETNIVAVERLKEYAGLDIEKEWRLHKDTSYNWPSQGKVEFKNYSLRYKANSDL-------------------VLKKINFTIFGGERVGIVGRTGAGKSSLSVALFRIVEAANGQILIDGKDISTLGLHDLRESLTVIPQEPLLFSGTLRSNL---DPENAFSDHDIWNTLGSVHLKEYIRDLKDGLNHSISEGGLNLSSGQRQLMCLARALLRSCKILILDEATAAVDWETDEKIQETIRCYFPSCTILTIAHRLKTIIDYDKILVLDKGTVIEFGSPNEL 1380 HSP 2 Score: 99.3673 bits (246), Expect = 2.106e-21 Identity = 76/309 (24.60%), Postives = 143/309 (46.28%), Query Frame = 0 Query: 304 VGRIYQPLTGLTNARIDVLTALVSFDRVFEVLDAPSPLADAPDAIELT-----DPKGRIEFRDVIFRYPLSNETIIPTLETPSSSLSDEDARPVIEHLDLVIEPGTLVAIVGPSGAGKTTITNLVPRLYDVTDGAIFVDGHDVRSYTQSSLRQAIGVVVQDPHLFHESIADNLRYAKPDATE--ADMIAACKAAQIHEVIAKLPSAYDTVVGERGYRFSGGEKQRLSIARMLLKDPAVVILDEATSHLDSE-NESLVQTALAEA---LSDRTALVIAHRLSTITEADLIVVLDEGRVAQSGTHDELLAE 601 + ++ P+ + ++A VS R+ ++L + DA + + + D I RD F++ S ED+ + +++L I+ G+L AIVG G+GK+++ + + G V+ + ++ I V Q+ + + S+ +N+ + KP E ++ C + ++ LP+ +T +GERG SGG++QR+S+AR + D V I D S LDS+ +S+ L + D+T L++ H +S + I V+ +G + GT+ ELL + Sbjct: 495 INKMKMPMAXFPFVIVXAISATVSLKRINQLLTSDELQKDAVERVPMKINQKIDQGDAIVIRDGNFKW------------------STEDSENTLSNINLRIKHGSLTAIVGTVGSGKSSLISAIL-------------GEMVKKSGKVRIKGQIAYVPQESWMQNTSLKNNILFGKPYDEEWYNQVLEYC---CLTYDLSLLPAGDETEIGERGINLSGGQRQRISLARAIYSDADVYIFDNPLSALDSQVGKSVFNNVLNNNTGIIKDKTRLLVTHGISYLPHVHHIAVMLKGEIIHEGTYQELLEK 769
BLAST of abc transporter permease atp-binding protein vs. L. salmonis genes
Match: EMLSAG00000008248 (supercontig:LSalAtl2s:LSalAtl2s498:229862:245360:1 gene:EMLSAG00000008248 transcript:EMLSAT00000008248 description:"maker-LSalAtl2s498-snap-gene-2.25") HSP 1 Score: 136.346 bits (342), Expect = 6.897e-33 Identity = 127/547 (23.22%), Postives = 238/547 (43.51%), Query Frame = 0 Query: 111 LRSALFDHVQRMPIAFFTRTQTGTLTNRLNSDVIGAQRALTATLGTVVSNVITLVTTLIAMFI-FEWRLTLL------ALILTPFFVMPYRRIGSIQQGITRESMDLNAQMNSTMT-----ERFNVSGALLTKLFGRHDDEVRLFSSRAERVRDIGIRSALFTRAFMIMLGLL----------GSIGTALVYGLGGLMVINGDFSVGDLAAMGLLVGRIYQPLTGLTNARIDVLTALVSFDRVFEVLDAPSPLADAPDAIELTDP------KGRIEFRDVIFRYPLSNETIIPTLETPSSSLSDEDARPVIEHLDLVIEPGTLVAIVGPSGAGKTTITNLVPRLYDVTDGAIFVDGHDVRSYTQSSLRQAIGVVVQDPHLFHESIADNLRYAKPDATEA----DMIAACKAAQIHEVIAKLPSAYDTVVGERGYRFSGGEKQRLSIARMLLKDPAVVILDEATSHLDSENESLVQTALAEALSDRTALVIAHRLSTITEADLIVVLDEGRVAQSGTHDELLAEGGLYSDLYQLPNRTDRPHHGDLRA 625 + L ++V R P++FF G + NR + D+ A L + +++ ++ T++ + I W ++ ++ F++ R++ I+ I+R + + T+T F + + + + D + + R + +R +I + L G +G +L Y L ++N L DV T +VS +R+ E + P +AP + +DP G I+F + RY + V++ ++ I+ G + IVG +GAGK+++T + R+ + ++G+I++DG ++R LR I ++ QDP LF S+ NL D EA D+ A + + + + L + V E G S G++Q + +AR +L+ +++LDEAT+ +D E + L+Q+ + D T L IAHR++TI +++ I+VLD G +A+ LLA S Y L N ++ + + R+ Sbjct: 1035 IHGKLLENVLRAPLSFFDTNPLGRILNRFSKDIDVAXTTLPFNIRMMIAQSFNVLGTIVIICIALPWFFVIILPAVICYALIQKFYISCARQVKRIE-SISRSP--IYSHFAETLTGIPTIRAFGMVHHFIDENVNKIDFNAKCYFPTVISSRWLAVRLETLGNILVIFVALFSITSRGTTDPGMVGLSLSYALSVTTILNM-----------------------LITVSTDVETNMVSVERIKEYENIPQ---EAPYDLPNSDPPPNWPEHGVIKFDNYKTRY-------------------RKGLDLVLKGINCTIQKGEKIGIVGRTGAGKSSLTLALFRIIEPSEGSIYIDGENIRFLGLGKLRSRITIIPQDPILFSGSLRMNL-----DPFEAFADRDIWIALEYSHLKSFVWNLGDGLNFSVLEGGRNLSVGQRQLICLARAILRKTQILVLDEATAAIDLETDDLIQSTIRSEFKDSTVLTIAHRINTIMDSNRIMVLDAGTIAEFDDPQNLLANPD--SMFYSLVNDSNGMGNKNFRS 1526 HSP 2 Score: 90.5077 bits (223), Expect = 1.029e-18 Identity = 75/265 (28.30%), Postives = 128/265 (48.30%), Query Frame = 0 Query: 381 SSSLSDEDARPVIEHLDLVIEPGTLVAIVGPSGAGKTTITNLVPRLYDVTDGAIFVDGHDVRSYTQSSLRQAIGVVVQDPHLFHESIADNLRYAK--PDATEADMIAACKAAQIHEVIAKLPSAYDTVVGERGYRFSGGEKQRLSIARMLLKDPAVVILDEATSHLDS-------ENESLVQTALAEALSDRTALVIAHRLSTITEADLIVVLDEGRVAQSGTHDELL-AEGGLYSDLYQLPNRTDRPHHGDLRADTAIVTAAHD 635 S S ++ +E +DL IE G+LVAIVG G+GK+++ + + ++ G+I VDG + + Q P L +E++ +N+ + K +I AC + ++ LP+ T +GERG SGG+K R+S+AR + + ILD+ S +D EN QT L L ++T + + H + + D I+V+ G +++SGT+ +L+ E G ++ L N L+ D + T D Sbjct: 623 SLSWETDEGLNTLEDIDLDIEKGSLVAIVGQVGSGKSSLLSGILGEMEIVRGSINVDGQTIYA-------------PQQPWLQNETLRNNILFGKRFNKKLYRRVIDACALSPDLDM---LPAGDLTEIGERGINLSGGQKARVSLARCTXNNGDIYILDDPLSAVDVHVGRHLFENVISSQTGL---LKNKTRIFVTHGAIFLPQTDKIIVMKNGVISESGTYRDLIEKENGEFAQF--LINYLVDEKENILKNDQDLKTIIKD 866
BLAST of abc transporter permease atp-binding protein vs. L. salmonis genes
Match: EMLSAG00000011700 (supercontig:LSalAtl2s:LSalAtl2s812:79332:86643:-1 gene:EMLSAG00000011700 transcript:EMLSAT00000011700 description:"maker-LSalAtl2s812-augustus-gene-0.6") HSP 1 Score: 133.65 bits (335), Expect = 5.899e-32 Identity = 130/515 (25.24%), Postives = 231/515 (44.85%), Query Frame = 0 Query: 111 LRSALFDHVQRMPIAFFTRTQTGTLTNRLNSDVIGAQRALTATLGTVVSNVITLVTTLIAMFIFEWRLTLLALILTPFFVMP-------YRRIGSIQQGITRESMDLNAQMNSTMTERF--NVSGALLTKLFGRHDDEVRLFSSRAERVRDIGIRSALFTRAFMIMLGLLGSI---GTALVYGLGGLMVINGDFSVGDLAAMGLLVGRIYQPLTGLTNARIDVLTALVSFDRVFEVLDAPSPLADAPDAIELTDPKGRIEFRDVIFRYPLSNETIIPTLETPSSSLSDEDARPVIEHLDLVIEPGTLVAIVGPSGAGKTTITNLVPRLYDVTDGAIFVDGHDVRSYTQSSLRQAIGVVVQDPHLFHESIADNLRYAKPDATEADM--IAACKAAQIHEVIAKLPSAYDTVVGERGYRFSGGEKQRLSIARMLLKDPAVVILDEATSHLDSENESLVQTALAEALSDRTALVIAHRLSTITEADLIVVLDEGRVAQSGTHDELLAEGGLYSDLYQL 611 L LF + + P++FF T G + NR D+ L T +S + ++ F + +T+++ I P F++P Y I + +R+ L++ S + F +SG + + F R + + + R I + L+G+ +AL L + G + +++ I L+ + D+ +V+ +R+ E + S +AP +E E + +PL E I L S +D V+ +++ I PG + IVG +G+GK+T+ + RL +V G I +DG D++ +LR + ++ QDP LF ++ NL P DM I + K A + + + + D V+ E G S G++Q + +AR LL+ V+I+DEAT+ +DSE + L+Q A+ + D T L IAHRL T+ + I+V+D G + + + LL++ S Y++ Sbjct: 1505 LHGTLFQCIIKTPMSFFDTTPLGRILNRFGQDI--------EVLDTKMS--FCIFGSMTGTFAYIATVTIIS-INVPIFIIPTLAIFVVYFVILIVSLSSSRQLKRLSSVATSPIYSHFGETLSGINTVRAYSLEKAFYSEFERRLDEYQKRNFPVIMADRWLGIRINLIGNFIIFASALFSVLSRDTITPGQLGLNVSSSLA-----ITSILSWVIRMYSDLENNIVAVERIKEYSNKES---EAPWELE--------EDLKLNSSWPLKGEITIKNL----SLKYRKDLDWVLRDINVHISPGDKIGIVGRTGSGKSTLALALFRLLEVNSGQITIDGVDIKKMGLHTLRSKLTIIPQDPTLFSGTLRLNL---DPFGLFKDMELIESLKHAYLQDFLKE--DGLDKVIAENGENISLGQRQLICLARALLRKNKVLIMDEATAAVDSETDKLIQKAIKDNFRDSTVLTIAHRLQTVLDYSKIIVIDSGCIIEYDSPKNLLSDSS--STFYKM 1981 HSP 2 Score: 85.5001 bits (210), Expect = 4.562e-17 Identity = 59/222 (26.58%), Postives = 111/222 (50.00%), Query Frame = 0 Query: 392 VIEHLDLVIEPGTLVAIVGPSGAGKTT-ITNLVPRLYDVTDGAIFVDGHDVRSYTQSSLRQAIGVVVQDPHLFHESIADNLRYA-KPDATEADMIAACKAAQIHEVIAKLPSAYDTVVGERGYRFSGGEKQRLSIARMLLKDPAVVILDEATSHLDSE-NESLVQTALAEA--LSDRTALVIAHRLSTITEADLIVVLDEGRVAQSGTHDELLAEGGLYSDL 608 + + + + + G L+AI+GP G+GK++ I+ L+ + + G V+ H +YT Q+ + + S+ DN+ + K + D + KA + + PS T +GE+G SGG+KQR+S+AR + + LD+ + +DS + L + + L +T +++ H LS + D I L +G + + GT+ EL+ + +S+L Sbjct: 1163 LFKDISMDVNRGNLIAIIGPVGSGKSSLISALLGEMLFTSKGTNPVEIHGSVAYTP-----------QNAWMQNVSVKDNILFGRKFNKNWYDEV--LKACSLESDMEXFPSGDSTEIGEKGINLSGGQKQRISLARAVYSQSDIYFLDDPLAXVDSHVAKHLFEEVIGSNGLLRGKTRILVTHNLSFLHLVDEIYFLKDGEITEKGTYKELMEKNCDFSEL 1371
BLAST of abc transporter permease atp-binding protein vs. L. salmonis genes
Match: EMLSAG00000002016 (supercontig:LSalAtl2s:LSalAtl2s1361:43077:48755:-1 gene:EMLSAG00000002016 transcript:EMLSAT00000002016 description:"augustus_masked-LSalAtl2s1361-processed-gene-0.2") HSP 1 Score: 126.716 bits (317), Expect = 7.445e-30 Identity = 75/206 (36.41%), Postives = 115/206 (55.83%), Query Frame = 0 Query: 406 VAIVGPSGAGKTTITNLVPRLYDVTDGAIFVDGHDVRSYTQSSLRQAIGVVVQDPHLFHESIADNLRYAKPDATEADMIAACKAAQIHEVIAKLPSAYDTVVGERGYRFSGGEKQRLSIARMLLKDPAVVILDEATSHLDSENESLVQTALAEALSDRTALVIAHRLSTITEADLIVVLDEGRVAQSGTHDELLAEG-GLYSDLYQ 610 V I G SG+GK+T+ + RL V G+I ++G ++ + S LR+ + + QD LF +I NL + D ++ + + A + + P DT V E G FS G++Q L+I + LL+ P VVILDE+TS LD E + L EA D T + +AHRLS I E + ++V+ EGR+ + G ELL + G +S L++ Sbjct: 1680 VGICGRSGSGKSTLLMGIVRLSRVLQGSITINGININAIPLSRLRKFVITIPQDAVLFSGTIRSNLD-PENDFSDELIWSTLDKADCGKTVRNFPDGLDTCVTENGDNFSLGQRQELNIVKALLRRPRVVILDESTSALDPNREVALHNTLLEAFEDSTLISVAHRLSNIVEYERVLVMGEGRILEDGNPKELLKKPMGFFSALWR 1884 HSP 2 Score: 90.5077 bits (223), Expect = 1.076e-18 Identity = 64/208 (30.77%), Postives = 104/208 (50.00%), Query Frame = 0 Query: 392 VIEHLDLVIEPGTLVAIVGPSGAGKTTITNLVPRLYDVTDGAIFVDGHDVRSYTQSSLRQAIGVVVQDPHLFHESIADNLRYAKP--DATEADMIAACKAAQIHEVIAKLPSAYDTVVGERGYRFSGGEKQRLSIARMLLKDPAVVILDEATSHLDSENESLV-QTALAEAL--SDRTALVIAHRLSTITEADLIVVLDEGRVAQSGT 594 V++ ++L I+ G+L ++GPSG+GKT + + + D G++ + ++ + ++ Q P L + +I DN+ +P + +IAAC + I LP DT +GERG SGG++QRL+IAR L +D S LDS+ S V + + + L RT + RL + AD IV L +G + GT Sbjct: 744 VLQSINLEIKTGSLTIVIGPSGSGKTALISSLIEEMDRITGSV-----------KWNVPDTVALLGQRPWLLNTTIKDNILLGRPFKEKRYKKVIAAC---DLQTDIDLLPHGDDTEIGERGVLLSGGQRQRLAIARCLYSKSYCTFMDAPFSSLDSKITSHVFEEGVLKILLKRRRTVFLTTERLDFLHRADHIVALKDGMIKAQGT 937
BLAST of abc transporter permease atp-binding protein vs. SwissProt
Match: gi|74996433|sp|Q54BU4.1|ABCB1_DICDI (RecName: Full=ABC transporter B family member 1; AltName: Full=ABC transporter ABCB.1) HSP 1 Score: 300.056 bits (767), Expect = 2.129e-87 Identity = 186/600 (31.00%), Postives = 312/600 (52.00%), Query Frame = 0 Query: 15 KGARITRESANRVWRFAEPYRSMVMGFLAIVTAQAVLGLVPPVLFGRIID-----QAIPDEDRRLLVIFAIFIVGSSLLEGVLALGERFLSARIGEGVIYDLRSALFDHVQRMPIAFFTRTQTGTLTNRLNSDVIGAQRALTATLGTVVSNVITLVTTLIAMFIFEWRLTLLALILTPFFVMPYRRIGSIQQGITRESMDLNAQMNSTMTERFNVSGALLTKLFGRHDDEVRLFSSRAERVRDIGIRSALFTRAFMIMLGLLGSIGTALVYGLGGLMVINGDFSVGDLAAMGLLVGRIYQPLTGLTNARIDVLTALVSFDRVFEVLDAPSPLADAPDAIELTDPKGRIEFRDVIFRYPLSNETIIPTLETPSSSLSDEDARPVIEHLDLVIEPGTLVAIVGPSGAGKTTITNLVPRLYDVTDGAIFVDGHDVRSYTQSSLRQAIGVVVQDPHLFHESIADNLRYAKPDATEADMIAACKAAQIHEVIAKLPSAYDTVVGERGYRFSGGEKQRLSIARMLLKDPAVVILDEATSHLDSENESLVQTALAEALSDRTALVIAHRLSTITEADLIVVLDEGRVAQSGTHDELLAE-GGLYSDL 608 K + + R+ + + P +++ + + ++ L P FG I+ + + + L + IF++GS + L +L G+ + +R LF + I +F + +TG L +RL+SD Q ++T + + I ++ ++I +FI WRLTLL L + P + G + + ++ D A+ ++T E +S + F + + L+S IG A+ T F ++ L+ + L+ +G V++G S GDL + L + L +++ D L A+ S DR+FE+ D P + ++ +P G IE +DV F YP P++S V++ L+L + GT+ A+VGPSG GK+T+ ++ R YD G+I DG D++ R IG V Q+P LF SI DN+ + AT +I+A + A H I + + YDT+VGERG R SGG+KQR++IAR ++++P +++LDEATS LD+E+E LV+ A+ E + DRT +VIAHRLST+ A+ +VV+++G++ + GTH ELL G+Y +L Sbjct: 327 KKVEVKHSNLKRLIQLSRPELPIILAAMVALVFSSLTSLAMPYFFGSIVQVVATTHSFNNLNSSTLALVVIFVIGS-----ISTLVRSWLFYLAGQKFVARIRRNLFSSIVNQEIGYFDQCRTGELLSRLSSDSQVIQNSVTVNISMLFRYTIQIIGSVILLFITNWRLTLLMLGIVPVLAISTVVYGKKIKQLGKQFQDELAKSSTTGEEV--ISNIRTVRSFSKEQKFIDLYSKDINGSYLIGKSLAVATGVFSGIVFLVAQLAIVLIVYVGARQVLDGTLSTGDLTSFLLYTLSLAMSLAFISSLMTDFLKAIGSSDRIFEIFDRV-PAINVSGGKQIQNPLGEIELKDVEFSYP----------TRPNNS--------VLKGLNLKLSKGTITALVGPSGGGKSTVIAMIERFYDPNSGSITFDGIDIKELDPVWYRGIIGYVSQEPVLFAGSIKDNITFGNDSATMDQIISAAEKANAHSFIEEFENGYDTIVGERGVRLSGGQKQRVAIARAMIQNPMILLLDEATSALDAESEYLVKQAIDEIMKDRTVIVIAHRLSTVINANTVVVINQGKIEEMGTHKELLNNTDGIYHNL 900
BLAST of abc transporter permease atp-binding protein vs. SwissProt
Match: gi|74997116|sp|Q54W24.1|ABCB4_DICDI (RecName: Full=ABC transporter B family member 4; AltName: Full=ABC transporter ABCB.4) HSP 1 Score: 296.204 bits (757), Expect = 4.089e-87 Identity = 206/622 (33.12%), Postives = 322/622 (51.77%), Query Frame = 0 Query: 11 RDSVKGARITRES-----ANRVWRFAEPYRSM-----VMGFLAIVTA--QAVLGLVPPVLFGRIIDQAIPDEDRRLLVIFAIFIV----GSSLLEGVL--ALGERFLSARIGEGVIYDLRSALFDHVQRMPIAFFTRTQTGTLTNRLNSDVIGAQRALTATLGTVVSNVITLVTTLIAMFIFEWRLTLLALILTPFFVMPYRRIGSIQQGITRESMDLN---AQMNSTMTERFNVSGALLTKLFGRHDDEVRLFSSRAERVRDIGIRSALFTRAFMIMLGLLGSIGTALVYGLGGLMVINGDFSVGDLAAMGLLVGRIYQPLTGLTNARIDVLTALVSFDRVFEVLDAPSPLADAPDAIELTDPKGRIEFRDVIFRYPLSNETIIPTLETPSSSLSDEDARP---VIEHLDLVIEPGTLVAIVGPSGAGKTTITNLVPRLYDVTDGAIFVDGHDVRSYTQSSLRQAIGVVVQDPHLFHESIADNLRYAKPDATEADMIAACKAAQIHEVIAKLPSAYDTVVGERGYRFSGGEKQRLSIARMLLKDPAVVILDEATSHLDSENESLVQTALAEALSDRTALVIAHRLSTITEADLIVVLDEGRVAQSGTHDELLAEGGLYSDL 608 +DS K I ES ++ F ++++ + GF I+TA + +GL P +FG +ID + + I AIFI+ G + L + ER+ SAR LRS LF + I FF + TG L NRL+SDV + AL ++ V + +V +I++ + +L+L + + P V +G+ G + S+ + AQ ST+ + + F E F + + + S + F + L + + LVY GG +V G+ + G L + + + + L+ +++A+ R+ E+++ PL ++ +L + KG I+F +V F+YP RP V+ L+L ++PG +VA+ G SG GK+TI L+ R YD+++G I +DG+ ++ LR IG+V Q+P LF +I +NLRY P+ATE ++I A K A H+ I+ P Y+T+VGERG + SGG+KQR++IAR +LK+P ++ILDEATS LDS++E LVQTAL + RT LVIAHRLST+ ADLI VL G++A+ G H+EL+ GLY L Sbjct: 173 KDSAKDDNIIEESDEDDGIKKISSFKLFFKTIGNDIWLFGF-GIITAFFSSWVGLQIPKVFGVLIDCTKNGDSLQGPAIQAIFILLAQAGLNFLYSTMISVACERY-SAR--------LRSTLFGAMLEQEIGFFDQNSTGDLINRLSSDVQLVRSALKHSVSLGVKSFGQIVGGVISLILISPKLSLGMMTILPTMV----SVGTFYAGWLK-SLSVRSQRAQAQSTIVAEEAIGNIRTVQAFSNQHYESERFIEKNQHSLALSTESGVQIGIFQGVTSLALNSVSLLVYWYGGTLVSRGEMTGGQLTSFIIHTMNMQSSFSQLSILFTQIMSAMGGMQRITELINRV-PLINSNQGFKLRELKGEIKFINVDFKYP---------------------TRPHVHVLNGLNLTLKPGQVVALAGSSGGGKSTIAGLLERFYDISNGDITIDGYSIKQLNAKWLRSRIGIVSQEPSLFATTILENLRYGNPNATEDEIIEAAKLANAHQFISNFPKGYETIVGERGVQLSGGQKQRIAIARAILKNPQIIILDEATSALDSQSELLVQTALDNLMKGRTTLVIAHRLSTVQNADLIGVLSHGKIAEFGNHNELMNHKGLYYKL 757
BLAST of abc transporter permease atp-binding protein vs. SwissProt
Match: gi|67468769|sp|Q7NZU6.1|MSBA_CHRVO (RecName: Full=Lipid A export ATP-binding/permease protein MsbA) HSP 1 Score: 290.426 bits (742), Expect = 7.889e-87 Identity = 181/576 (31.42%), Postives = 301/576 (52.26%), Query Frame = 0 Query: 36 SMVMGFLAIVTAQAVLGLVPPVLFGRIIDQAIPDEDRRLLVIFAIFIVGSSLLEGVLALGERFLSARIGEGVIYDLRSALFDHVQRMPIAFFTRTQTGTLTNRLNSDVIGAQRALTATLGTVVSNVITLVTTLIAMFIFEWRLTLLALILTPFFVMPYRRIGSIQQGITRESMDLNAQMNSTMTERFNVSGALLTKLFGRHDDEVRLFSSRAERVRDIGIRSALFTRAFMIMLGLLGSIGTALVYGLGGLMVINGDFSVGDLAAMGLLVGRIYQPLTGLTNARIDVLTALVSFDRVFEVLDAPSPLADAPDAIELTDPKGRIEFRDVIFRYPLSNETIIPTLETPSSSLSDEDARPVIEHLDLVIEPGTLVAIVGPSGAGKTTITNLVPRLYDVTDGAIFVDGHDVRSYTQSSLRQAIGVVVQDPHLFHESIADNLRYAKPDATEADMIAACKAAQIHEVIAKLPSAYDTVVGERGYRFSGGEKQRLSIARMLLKDPAVVILDEATSHLDSENESLVQTALAEALSDRTALVIAHRLSTITEADLIVVLDEGRVAQSGTHDELLAEGGLYSDLYQL 611 SM+ +A +T AV L+ P +ID ++D ++++ + I+G L+ G+ + ++ + ++ LR +F + +P ++ Q+G L +R+ +DV A + V + +T + L M +W+LTL+ L++ P R +G +G+ R++ AQM + E A+ K++G + E+ F A VR ++ + + A + L+ + A + GL +G + GD + ++ P+ +++ + L + + VF +D P D A+ T +GR+ F V F YP + P + +DL I+PG VA+VG SG+GKTT+ +LVPR Y+ + G + +DG + LR I +V Q LF++++A N+ Y + DA+ +++ A +AA E I LP +TV+GE G R SGG++QRL+IAR LLK+ ++ILDEATS LD+++E LVQ AL + +RT +VIAHRLSTI AD IVV+ +GR+A+ G H LL +GGLY+ L+ L Sbjct: 29 SMLSMAVAALTEPAVAKLLKP-----LIDGGFVNKDPQVIMWVPLAIIGIYLIRGLAGFINEYTASWLTGQLVQRLRQQMFAKLVNLPARYYDEHQSGRLMSRITNDVNQVTEAGFNVITVTVRDGLTALGMLGLMLTTDWQLTLICLVVMPAVTYCMRLVGQRLRGLARQNQQHMAQMTQVLAESIQCQRAI--KVYGGQEREMARFDHTATSVRRNQVKQSAASAANTGVTQLMIACALAAILYFAGLRAQHGGLTAGDFMVFLTAMLGLFAPVKRISSVSQAMQRGLAAAESVFAFIDEPGEPDDGASALPAT--RGRLSFDAVSFAYPNVDS-------------------PALSGIDLEIQPGETVALVGSSGSGKTTLASLVPRFYEPSAGRLLLDGVPLADIPLRQLRGHIALVSQQVELFNDTVAANIAYGREDASREEIVEAARAANAMEFIEGLPDGLETVIGENGARLSGGQRQRLAIARALLKNAPLLILDEATSALDTQSERLVQAALENLMKNRTTIVIAHRLSTIENADRIVVMHQGRLAEQGRHQALLEQGGLYARLHSL 576
BLAST of abc transporter permease atp-binding protein vs. SwissProt
Match: gi|81910043|sp|Q5RKI8.1|ABCB8_RAT (RecName: Full=ATP-binding cassette sub-family B member 8, mitochondrial; Flags: Precursor) HSP 1 Score: 293.508 bits (750), Expect = 1.411e-86 Identity = 208/615 (33.82%), Postives = 324/615 (52.68%), Query Frame = 0 Query: 17 ARITRESANRVWRFAEPYRSMVMGFLAIVTA--QAVLGLVPPVLFGRIID----------QAIPDEDRRLLVIFAIFIVGSSLLEGVLALGERFLSARIGEGVIYDLRSALFDHVQRMPIAFFTRTQTGTLTNRLNSDVIGAQRALTATLGTVVSNVITLVTTLIAMFIFEWRLTLLALILTPFFVMPYRRIGSIQQGITRESMDLNAQMNSTMTE-----RFNVSGALLTKLFGRHDDEVRLFSSRAERV-RDIGIRSALFTRAFMIMLGLLGSIGTALVYGLGGLMVINGDFSVGDLAAMGLLVGRIYQPLTGLTNARIDVLTALVSFDRVFEVLD-APSPLADAPDAIELTDPKGRIEFRDVIFRYPLSNETIIPTLETPSSSLSDEDARP---VIEHLDLVIEPGTLVAIVGPSGAGKTTITNLVPRLYDVTDGAIFVDGHDVRSYTQSSLR-QAIGVVVQDPHLFHESIADNLRYAKPDATEADMIAACKAAQIHEVIAKLPSAYDTVVGERGYRFSGGEKQRLSIARMLLKDPAVVILDEATSHLDSENESLVQTALAEALSDRTALVIAHRLSTITEADLIVVLDEGRVAQSGTHDELLAEGGLYSDL 608 AR R W F P+ + +G LAIV A A++ + P+L G++++ + E RRL + + + G ++G+L G L + +GE + D+R ALF + R IAFF +TG L +RL +DV + + + + + ++ +L+ + I RLTL+ ++TP + +GS + ++R+ + A+ E R + A+ + R+ E+ +AE + R I + L AF M+ +GT + GG +V GDL + + + + + L+ V+ L + RVFE + +P +I D +G I F++V F YP RP V+++ L + PG +VA+VG SG GKTT+ +L+ R YD T G + +DGHD+R+ S LR Q IG + Q+P LF +I +N+R+ K DA++ ++ A + A HE I+ P Y TVVGERG SGG+KQRL+IAR L+K P V+ILDEATS LD+E+E +VQ AL A + RT LVIAHRLST+ A I+V+ G+V ++GTH+ELL +GGLY++L Sbjct: 109 ARELRFKWKLFWHFLHPHL-LALG-LAIVLALGAALVNVQIPLLLGQLVEIVAKYTREHVGSFVSESRRLSIQL-LLLYG---VQGLLTFGYLVLLSHMGERMAMDMRKALFSSLLRQDIAFFDAKKTGQLVSRLTTDVQEFKSSFKLVISQGLRSSTQVIGSLMTLSILSPRLTLMLAVVTPALMGVGTLMGSGLRKLSRQCQEQIARATGVADEALGSVRTVRAFAMEKREEERYQAELESCCCKAEELGRGIALFQGLSNIAFNCMV-----LGTLFI---GGSLVAGQQLKGGDLMSFLVASQTVQRSMASLSVLFGQVVRGLSAGARVFEYMSLSPVIPLTGGYSIPSKDLRGSITFQNVSFSYP---------------------CRPGFNVLKNFTLKLPPGKIVALVGQSGGGKTTVASLLERFYDPTAGVVTLDGHDLRTLDPSWLRGQVIGFISQEPVLFATTIMENIRFGKLDASDEEVYTAARKANAHEFISSFPDGYSTVVGERGTTLSGGQKQRLAIARALIKRPTVLILDEATSALDAESERIVQEALDRASAGRTVLVIAHRLSTVRAAHSIIVMANGQVCEAGTHEELLQKGGLYAEL 688
BLAST of abc transporter permease atp-binding protein vs. SwissProt
Match: gi|122246555|sp|Q0WML0.1|AB27B_ARATH (RecName: Full=ABC transporter B family member 27; Short=ABC transporter ABCB.27; Short=AtABCB27; AltName: Full=Aluminum tolerance-related ATP-binding cassette transporter; AltName: Full=Antigen peptide transporter-like 2; AltName: Full=Transporter associated with antigen processing-like protein 2; Short=AtTAP2) HSP 1 Score: 290.041 bits (741), Expect = 4.775e-86 Identity = 204/608 (33.55%), Postives = 318/608 (52.30%), Query Frame = 0 Query: 22 ESAN----RVWRFAEP-YRSMVMGFLAIVTAQAVLGLVPPVLFGRII------DQAIPDEDRRLLVIF--AIFIVGSSLLEGVLALGER-FLSARIGEGVIYDLRSALFDHVQRMPIAFFTRTQTGTLTNRLNSDVIGAQRALTATLGTVVSNVITLVTTLIAMFIFEWRLTLLALILTPFFVMPYRRIGSIQQGITRESMDLNAQMNSTMTERFNVSGALLT-KLFGRHDDEVRLFSSRAERVRDIGIRSALFTRAFMIMLGLLGSIGTALVYGLGGLMVINGDFSVGDLAAMGLLVGRIYQPLTGLTNARIDVLTALVSFDRVFEVLDAPSPLADAPDAIELTDPKGRIEFRDVIFRYPLSNETIIPTLETPSSSLSDEDARP---VIEHLDLVIEPGTLVAIVGPSGAGKTTITNLVPRLYDVTDGAIFVDGHDVRSYTQSSLRQAIGVVVQDPHLFHESIADNLRYA-KPDATEADMIAACKAAQIHEVIAKLPSAYDTVVGERGYRFSGGEKQRLSIARMLLKDPAVVILDEATSHLDSENESLVQTALAEALSDRTALVIAHRLSTITEADLIVVLDEGRVAQSGTHDELLAEGGLYSDLYQ 610 E+AN RV+ A+P +V+G +A++ LVP FG +I D P++ L+ A+ I+ ++ G + R +L E V+ LR LF H+ IAF+ T+TG L +RL+ D + A T L + NV T + + MF W+LTLLAL++ P + ++ G + ++ + A S E F GA+ T + F + V +S + + +G++ A+ F L ++ V G + I G +VG L + L + ++ L++ + A + RVF++LD S ++ + D + +P G +E DV F YP +RP +++ + L + PG+ VA+VGPSG GKTTI NL+ R YD G I ++G + + L + I +V Q+P LF+ S+ +N+ Y +A+ D+ A K A HE I P Y+TVVGERG R SGG+KQR++IAR LL +P+V++LDEATS LD+E+E LVQ A+ ++ RT LVIAHRLST+ AD + V+ +G VA+ GTHDELL+ G+Y++L + Sbjct: 51 EAANVGFGRVFALAKPDAGKLVIGTIALLIGSTTNLLVPK--FGGMIIDIVSRDVKTPEQQTESLIAVRNAVVIILLIVVIGSICTALRAWLFNSASERVVARLRKDLFRHLMHQEIAFYDVTKTGELLSRLSEDTQIIKNAATTNLSEALRNVTTALIGVGFMFTSSWKLTLLALVVVPVISVAVKQFGRYLRELSHTTQAAAAVAASIAEESF---GAVRTVRSFAKESYMVSQYSKKVDETLKLGLKQAVLVGLFFGGLNAAFTLSVITVVSYGAYLTIYGSMTVGALTSFILYSLTVGSSVSSLSSLYTTAMKAAGASRRVFQILDRVSSMSSSGDKCPVGNPDGDVELNDVWFAYP---------------------SRPSHMILKGISLRLTPGSKVALVGPSGGGKTTIANLIERFYDPLKGKILLNGVSLMEISHQYLHKQISIVSQEPILFNCSVEENIAYGFDGEASFTDIENAAKMANAHEFIEAFPDKYNTVVGERGLRLSGGQKQRIAIARALLTNPSVLLLDEATSALDAESEYLVQDAMDSLMAGRTVLVIAHRLSTVKTADCVAVISDGEVAEKGTHDELLSLNGIYTNLVK 632
BLAST of abc transporter permease atp-binding protein vs. nr
Match: gi|1272496083|gb|PHX92890.1| (ABC transporter [Acidimicrobium sp.]) HSP 1 Score: 712.22 bits (1837), Expect = 0.000e+0 Identity = 344/599 (57.43%), Postives = 445/599 (74.29%), Query Frame = 0 Query: 8 PRDRDSVKGARITRESANRVWRFAEPYRSMVMGFLAIVTAQAVLGLVPPVLFGRIIDQAIPDEDRRLLVIFAIFIVGSSLLEGVLALGERFLSARIGEGVIYDLRSALFDHVQRMPIAFFTRTQTGTLTNRLNSDVIGAQRALTATLGTVVSNVITLVTTLIAMFIFEWRLTLLALILTPFFVMPYRRIGSIQQGITRESMDLNAQMNSTMTERFNVSGALLTKLFGRHDDEVRLFSSRAERVRDIGIRSALFTRAFMIMLGLLGSIGTALVYGLGGLMVINGDFSVGDLAAMGLLVGRIYQPLTGLTNARIDVLTALVSFDRVFEVLDAPSPLADAPDAIELTDPKGRIEFRDVIFRYPLSNETIIPTLETPSSSLSDEDARPVIEHLDLVIEPGTLVAIVGPSGAGKTTITNLVPRLYDVTDGAIFVDGHDVRSYTQSSLRQAIGVVVQDPHLFHESIADNLRYAKPDATEADMIAACKAAQIHEVIAKLPSAYDTVVGERGYRFSGGEKQRLSIARMLLKDPAVVILDEATSHLDSENESLVQTALAEALSDRTALVIAHRLSTITEADLIVVLDEGRVAQSGTHDELLAEGGLYS 606 PRD+ V GA+I + S RVWRFA PYR ++GFLA + +++ L PP++F I+D+AIPD D+R +V + +V +L + L + +R+ SARIGEG+IYDLR ALFD VQ MPIAFFTRTQTG L +RLN+DV+GAQ A+T TLG+VVSNV+ TTL+AM EWRLTLLALI+ P F++P +R+G+ Q I+RE M LNA MN+ MTERFNVSGALL KLFGRH +EV F SRA RVRDIG+ +A++ R F + LGL+G++G +YG+G MV++G ++G L AM V RIYQPLTGLTNAR++VLTALVSF+RVFEVLDAP + D A+++ +P+G IEF +V FRYP + I +LE + V++ + L I PG VAIVG SG+GKTT+ L+ RLYDVT GA+ +D DVR T +SLR AIGVV QD H+FHES+ NL YA PDAT+ ++A+C+AA+IH+VIA LP YDT+VGERG+R SGGEKQRL+IAR+LLK+PAV+ILDEATSHLD+E E LVQ AL A+ +RT+LVIAHRLSTI +AD IVVLD G + + GTH++L+ Y+ Sbjct: 2 PRDKTGVAGAKIGKTSVRRVWRFARPYRRSILGFLATILITSLIALAPPLMFRLIVDEAIPDADKRRIVFLTVILVFVALGDAALQIIQRWYSARIGEGLIYDLRVALFDKVQNMPIAFFTRTQTGALISRLNNDVVGAQTAVTGTLGSVVSNVVIFTTTLVAMLALEWRLTLLALIVLPVFIVPAKRVGARLQEISREQMGLNASMNTQMTERFNVSGALLVKLFGRHKEEVGAFGSRASRVRDIGVTAAMYGRVFFVALGLVGALGAVAIYGVGAFMVVSGGITIGTLVAMAAFVQRIYQPLTGLTNARLEVLTALVSFERVFEVLDAPVAITDRMGAVDIVNPRGEIEFENVSFRYPPGSSVSIASLELSGVMQGADPDVDVLKSVSLKIAPGETVAIVGASGSGKTTLAMLLARLYDVTSGAVRIDSKDVRDLTSNSLRAAIGVVSQDSHMFHESVKSNLLYACPDATQEQIVASCQAAKIHDVIAALPDGYDTIVGERGFRLSGGEKQRLAIARLLLKNPAVMILDEATSHLDNEGEVLVQNALDAAMKNRTSLVIAHRLSTIRDADRIVVLDNGTIIEQGTHEQLIENNSHYA 600
BLAST of abc transporter permease atp-binding protein vs. nr
Match: gi|1272460502|gb|PHX59610.1| (ABC transporter [Actinobacteria bacterium]) HSP 1 Score: 705.671 bits (1820), Expect = 0.000e+0 Identity = 351/621 (56.52%), Postives = 462/621 (74.40%), Query Frame = 0 Query: 1 MAMHAI---WPRDRDSVKGARITRESANRVWRFAEPYRSMVMGFLAIVTAQAVLGLVPPVLFGRIIDQAIPDEDRRLLVIFAIFIVGSSLLEGVLALGERFLSARIGEGVIYDLRSALFDHVQRMPIAFFTRTQTGTLTNRLNSDVIGAQRALTATLGTVVSNVITLVTTLIAMFIFEWRLTLLALILTPFFVMPYRRIGSIQQGITRESMDLNAQMNSTMTERFNVSGALLTKLFGRHDDEVRLFSSRAERVRDIGIRSALFTRAFMIMLGLLGSIGTALVYGLGGLMVINGDFSVGDLAAMGLLVGRIYQPLTGLTNARIDVLTALVSFDRVFEVLDAPSPLADAPDAIELTDPKGRIEFRDVIFRYPLSNETIIPTLETPSSSLSDEDARPVIEHLDLVIEPGTLVAIVGPSGAGKTTITNLVPRLYDVTDGAIFVDGHDVRSYTQSSLRQAIGVVVQDPHLFHESIADNLRYAKPDATEADMIAACKAAQIHEVIAKLPSAYDTVVGERGYRFSGGEKQRLSIARMLLKDPAVVILDEATSHLDSENESLVQTALAEALSDRTALVIAHRLSTITEADLIVVLDEGRVAQSGTHDELLAEGGLYSDLY--QLPNRTD 616 MAMH + + D D+V+G ++ R+ RV A PYR ++GFL V A A + ++PP+LF ++D A+P+ + +L+ + A+ VG ++ L+L +R+ SA IGE +IYDLR ++FDHVQR+PI+FFTR QTG+L +R+N+DVIGAQ+A+T TLGTVVSN IT++ TL MF EWRLTL+ LI+ P F++P RRIG Q TRE M LNA MN+T ERFNVSGAL+ KLFG HD E LFS+RA RVRDIGI++A+++R + LG + ++GTA+VY +GG +VI S+G +AA+ + VG+IYQPLT LTNAR+DV+TALVSF+RVFE+LD P+ + D A+ L PKG I+F DV FR+P ++ + +LE +SDE + ++ + + PG +VA+VGPSGAGKT+ LVPR+ DV G++ VDGHDVRS T SLR ++GVV+QDPHLFHESIA+NLRYA+PDA++ D+ AC+AA I+++I LP + T+VGERGYR SGGEKQRL+IARMLLKDPA+VILDEAT+HLDSE+E +Q ALA AL+DRTALVIAHRLSTI AD I+VLDEGRV GTH ELLA GGLY+DLY QL D Sbjct: 1 MAMHTMMMSFRHDPDAVRGRKLERDLLRRVMGLARPYRKHLIGFLITVFAAAGVAVLPPLLFRALLDDAVPNSNTQLVTLLALGAVGLAIAGSGLSLLQRWYSAHIGESMIYDLRISMFDHVQRLPISFFTRAQTGSLMSRMNNDVIGAQQAVTGTLGTVVSNTITIIITLAVMFSLEWRLTLMTLIVLPAFIIPARRIGRKLQSSTREGMQLNASMNNTAAERFNVSGALVVKLFGNHDLETELFSNRARRVRDIGIKTAMYSRVLFVALGFVAAVGTAVVYYVGGRLVIEDVISLGTIAALVIYVGQIYQPLTQLTNARVDVMTALVSFERVFEILDFPALVDDESGALSLAKPKGEIKFTDVWFRHPAASVASLASLEEGDLEISDEPSPWILHGVSFSVAPGEIVALVGPSGAGKTSTALLVPRIADVNRGSVSVDGHDVRSLTLGSLRDSVGVVMQDPHLFHESIAENLRYARPDASDRDLAEACRAANIYDLIISLPEGFATIVGERGYRMSGGEKQRLAIARMLLKDPAIVILDEATAHLDSESEQEIQVALANALADRTALVIAHRLSTIVNADRIIVLDEGRVVDQGTHLELLARGGLYADLYNTQLDRNQD 621
BLAST of abc transporter permease atp-binding protein vs. nr
Match: gi|684288133|gb|KGA07832.1| (putative ABC transporter permease/ATP-binding protein [actinobacterium acAcidi]) HSP 1 Score: 700.279 bits (1806), Expect = 0.000e+0 Identity = 360/606 (59.41%), Postives = 465/606 (76.73%), Query Frame = 0 Query: 1 MAMHAIWPRDRDSVKGARITRESANRVWRFAEPYRSMVMGFLAIVTAQAVLGLVPPVLFGRIIDQAIPDEDRRLLVIFAIFIVGSSLLEGVLALGERFLSARIGEGVIYDLRSALFDHVQRMPIAFFTRTQTGTLTNRLNSDVIGAQRALTATLGTVVSNVITLVTTLIAMFIFEWRLTLLALILTPFFVMPYRRIGSIQQGITRESMDLNAQMNSTMTERFNVSGALLTKLFGRHDDEVRLFSSRAERVRDIGIRSALFTRAFMIMLGLLGSIGTALVYGLGGLMVINGDFSVGDLAAMGLLVGRIYQPLTGLTNARIDVLTALVSFDRVFEVLDAPSPLADAPDAIELTDPKGRIEFRDVIFRYPLSNETIIPTLETPSSSLSDEDARPVIEHLDLVIEPGTLVAIVGPSGAGKTTITNLVPRLYDVTDGAIFVDGHDVRSYTQSSLRQAIGVVVQDPHLFHESIADNLRYAKPDATEADMIAACKAAQIHEVIAKLPSAYDTVVGERGYRFSGGEKQRLSIARMLLKDPAVVILDEATSHLDSENESLVQTALAEALSDRTALVIAHRLSTITEADLIVVLDEGRVAQSGTHDELLAEGGLYS 606 M H + P D +VKGA++ R S RVW FA PYR+ ++ FL + A+L L PP+LF I+D+AIP E+R L+ AI +V +++ + LA+ +R+LS+RIGEG+IYDLR ALFD V++MPIAFFTRTQTG LT+RLN+DV+GAQ A+T TLG+VVSNV+ LVTTL+AM EWRLTLL+LI+ P F++P +R+G I R+ M++NA+MN+ M ERFNV+GA++ KLFGR + EV FS RA VRD GI++AL++R F + LGL+G++G A +YG+G +V++G S G L AM V RIYQPLTGLTNARI+V+TA VSFDRVFEVLDAP + D P A++L DP+G +EF +V+FRYP ++E+ + +LE P SS SD D V++ + L I G +AIVG SG+GK+T+ LVPRLYDVT GA+ VDG DVR T +L AIGVV QDPHLFHESI DNLRYAKPDAT+AD++AAC AA+IH+ IA LP Y T+VGERGYRFSGGEKQR++IARMLLK+PA++ILDEATSHLD+ENE+LVQ AL AL RTA+VIAHRLSTI +AD IVVLD+G + + GTHDEL+ +Y+ Sbjct: 1 MGPHMMLPGDGAAVKGAKVQRASLRRVWIFATPYRTDIVVFLTAICVSALLALAPPLLFRAILDRAIPQENRGLITTLAIILVFAAIADAGLAIVQRWLSSRIGEGLIYDLRVALFDKVEQMPIAFFTRTQTGALTSRLNNDVVGAQNAVTNTLGSVVSNVVVLVTTLVAMIALEWRLTLLSLIVLPLFIVPAKRVGQKLGSIARQQMEINAEMNTQMNERFNVAGAMVVKLFGRREREVATFSGRAAGVRDTGIKAALYSRVFFVALGLVGAMGAAAIYGIGAHLVVSGGISAGTLVAMAAFVQRIYQPLTGLTNARIEVITAFVSFDRVFEVLDAPVAIFDRPGAVDLIDPRGEVEFSNVVFRYPPASESSVASLEAPGSSSSDPDV-DVLKGISLKIASGETIAIVGSSGSGKSTLATLVPRLYDVTQGAVRVDGIDVRDLTGDTLHDAIGVVTQDPHLFHESIGDNLRYAKPDATQADIVAACVAARIHDTIAALPDGYSTLVGERGYRFSGGEKQRVAIARMLLKNPAIMILDEATSHLDNENEALVQEALESALHGRTAIVIAHRLSTIRDADRIVVLDDGLIMEQGTHDELMTLDAMYA 605
BLAST of abc transporter permease atp-binding protein vs. nr
Match: gi|918757269|ref|WP_052610134.1| (ABC transporter ATP-binding protein [Actinobacteria bacterium IMCC26256]) HSP 1 Score: 685.641 bits (1768), Expect = 0.000e+0 Identity = 343/602 (56.98%), Postives = 455/602 (75.58%), Query Frame = 0 Query: 9 RDRDSVKGARITRESANRVWRFAEPYRSMVMGFLAIVTAQAVLGLVPPVLFGRIIDQAIPDEDRRLLVIFAIFIVGSSLLEGVLALGERFLSARIGEGVIYDLRSALFDHVQRMPIAFFTRTQTGTLTNRLNSDVIGAQRALTATLGTVVSNVITLVTTLIAMFIFEWRLTLLALILTPFFVMPYRRIGSIQQGITRESMDLNAQMNSTMTERFNVSGALLTKLFGRHDDEVRLFSSRAERVRDIGIRSALFTRAFMIMLGLLGSIGTALVYGLGGLMVINGDFSVGDLAAMGLLVGRIYQPLTGLTNARIDVLTALVSFDRVFEVLDAPSPLADAPDAIELTDPKGRIEFRDVIFRYPLSNETIIPTLETPSSSLSDEDARPVIEHLDLVIEPGTLVAIVGPSGAGKTTITNLVPRLYDVTDGAIFVDGHDVRSYTQSSLRQAIGVVVQDPHLFHESIADNLRYAKPDATEADMIAACKAAQIHEVIAKLPSAYDTVVGERGYRFSGGEKQRLSIARMLLKDPAVVILDEATSHLDSENESLVQTALAEALSDRTALVIAHRLSTITEADLIVVLDEGRVAQSGTHDELLAEGGLYSDLYQ 610 D D+VKG + R+ RV+ PYR ++GF+ V AV+G++PP+LF ++D A+P+++ L++ A+ V ++ L+L +R+ SA +GEG+IYD+R +LFDHVQRMPIAFFTRTQTG+L +RLN+DVIGAQ+A+T TLGTV+SNVITLV TL M EWRLT+L L++ P F++P RRIG Q TRES +NA MN+T+ ERFNV+GAL+ KLFG HD E F+SRA RVRDIGI++A+++R + LGL+ ++GTA+VY +GG M I G S+G + A + VG+IYQPLT LTNAR+DV+TALVSF+RVFE+LD PS + ++P A+ L PKG+I+F V FR+P + + +LE + S E + +++ ++L I PG VA+VGPSGAGKTT LVPR+ DV +GA+ +DGHDVR T S+ AIG V+QDPHLFH SI +NLRYAKP+AT+A++ +AC+AA+IH++IA LP Y+TVVGERGYR SGGEKQR++IAR+LLK PAV+ILDEATSHLDSE+E +Q ALAEAL RTALVIAHRLSTI AD IVV+D GR+ + GTHD+LL GGLY+DLY+ Sbjct: 5 HDPDAVKGKHLERDLIRRVFGMTGPYRGALIGFIITVVLSAVVGVIPPLLFRSLLDNAVPNKNEGLVIWLAVAAVALAVASAGLSLVQRWYSAIVGEGLIYDMRVSLFDHVQRMPIAFFTRTQTGSLMSRLNNDVIGAQQAVTGTLGTVISNVITLVVTLSVMLALEWRLTILTLVVLPAFIIPARRIGKRLQAATRESFVVNASMNNTIAERFNVAGALVVKLFGAHDRERDEFASRAARVRDIGIQTAMYSRVLFVALGLVAAVGTAVVYYVGGHMAIVGTISIGTVGAFVIYVGQIYQPLTQLTNARVDVMTALVSFERVFEILDFPSIVTESPTAVTLESPKGQIDFDHVWFRHPAPDLVSLASLEDGGAPGS-EPSEWILQDINLSIAPGEFVALVGPSGAGKTTTAMLVPRVADVVEGALRIDGHDVRELTMDSVHAAIGFVMQDPHLFHSSIRENLRYAKPEATDAEIESACRAARIHDLIATLPDGYNTVVGERGYRMSGGEKQRIAIARVLLKSPAVIILDEATSHLDSESELAIQRALAEALKGRTALVIAHRLSTIVAADRIVVVDGGRIVEQGTHDQLLNLGGLYADLYR 605
BLAST of abc transporter permease atp-binding protein vs. nr
Match: gi|829574424|gb|AKL72718.1| (ABC-type multidrug transport system, ATPase and permease component [Actinobacteria bacterium IMCC26256]) HSP 1 Score: 685.641 bits (1768), Expect = 0.000e+0 Identity = 343/602 (56.98%), Postives = 455/602 (75.58%), Query Frame = 0 Query: 9 RDRDSVKGARITRESANRVWRFAEPYRSMVMGFLAIVTAQAVLGLVPPVLFGRIIDQAIPDEDRRLLVIFAIFIVGSSLLEGVLALGERFLSARIGEGVIYDLRSALFDHVQRMPIAFFTRTQTGTLTNRLNSDVIGAQRALTATLGTVVSNVITLVTTLIAMFIFEWRLTLLALILTPFFVMPYRRIGSIQQGITRESMDLNAQMNSTMTERFNVSGALLTKLFGRHDDEVRLFSSRAERVRDIGIRSALFTRAFMIMLGLLGSIGTALVYGLGGLMVINGDFSVGDLAAMGLLVGRIYQPLTGLTNARIDVLTALVSFDRVFEVLDAPSPLADAPDAIELTDPKGRIEFRDVIFRYPLSNETIIPTLETPSSSLSDEDARPVIEHLDLVIEPGTLVAIVGPSGAGKTTITNLVPRLYDVTDGAIFVDGHDVRSYTQSSLRQAIGVVVQDPHLFHESIADNLRYAKPDATEADMIAACKAAQIHEVIAKLPSAYDTVVGERGYRFSGGEKQRLSIARMLLKDPAVVILDEATSHLDSENESLVQTALAEALSDRTALVIAHRLSTITEADLIVVLDEGRVAQSGTHDELLAEGGLYSDLYQ 610 D D+VKG + R+ RV+ PYR ++GF+ V AV+G++PP+LF ++D A+P+++ L++ A+ V ++ L+L +R+ SA +GEG+IYD+R +LFDHVQRMPIAFFTRTQTG+L +RLN+DVIGAQ+A+T TLGTV+SNVITLV TL M EWRLT+L L++ P F++P RRIG Q TRES +NA MN+T+ ERFNV+GAL+ KLFG HD E F+SRA RVRDIGI++A+++R + LGL+ ++GTA+VY +GG M I G S+G + A + VG+IYQPLT LTNAR+DV+TALVSF+RVFE+LD PS + ++P A+ L PKG+I+F V FR+P + + +LE + S E + +++ ++L I PG VA+VGPSGAGKTT LVPR+ DV +GA+ +DGHDVR T S+ AIG V+QDPHLFH SI +NLRYAKP+AT+A++ +AC+AA+IH++IA LP Y+TVVGERGYR SGGEKQR++IAR+LLK PAV+ILDEATSHLDSE+E +Q ALAEAL RTALVIAHRLSTI AD IVV+D GR+ + GTHD+LL GGLY+DLY+ Sbjct: 11 HDPDAVKGKHLERDLIRRVFGMTGPYRGALIGFIITVVLSAVVGVIPPLLFRSLLDNAVPNKNEGLVIWLAVAAVALAVASAGLSLVQRWYSAIVGEGLIYDMRVSLFDHVQRMPIAFFTRTQTGSLMSRLNNDVIGAQQAVTGTLGTVISNVITLVVTLSVMLALEWRLTILTLVVLPAFIIPARRIGKRLQAATRESFVVNASMNNTIAERFNVAGALVVKLFGAHDRERDEFASRAARVRDIGIQTAMYSRVLFVALGLVAAVGTAVVYYVGGHMAIVGTISIGTVGAFVIYVGQIYQPLTQLTNARVDVMTALVSFERVFEILDFPSIVTESPTAVTLESPKGQIDFDHVWFRHPAPDLVSLASLEDGGAPGS-EPSEWILQDINLSIAPGEFVALVGPSGAGKTTTAMLVPRVADVVEGALRIDGHDVRELTMDSVHAAIGFVMQDPHLFHSSIRENLRYAKPEATDAEIESACRAARIHDLIATLPDGYNTVVGERGYRMSGGEKQRIAIARVLLKSPAVIILDEATSHLDSESELAIQRALAEALKGRTALVIAHRLSTIVAADRIVVVDGGRIVEQGTHDQLLNLGGLYADLYR 611
BLAST of abc transporter permease atp-binding protein vs. nr
Match: gi|1200625883|gb|OUX34141.1| (ABC transporter [Actinobacteria bacterium TMED270]) HSP 1 Score: 684.485 bits (1765), Expect = 0.000e+0 Identity = 339/593 (57.17%), Postives = 440/593 (74.20%), Query Frame = 0 Query: 19 ITRESANRVWRFAEPYRSMVMGFLAIVTAQAVLGLVPPVLFGRIIDQAIPDEDRRLLVIFAIFIVGSSLLEGVLALGERFLSARIGEGVIYDLRSALFDHVQRMPIAFFTRTQTGTLTNRLNSDVIGAQRALTATLGTVVSNVITLVTTLIAMFIFEWRLTLLALILTPFFVMPYRRIGSIQQGITRESMDLNAQMNSTMTERFNVSGALLTKLFGRHDDEVRLFSSRAERVRDIGIRSALFTRAFMIMLGLLGSIGTALVYGLGGLMVINGDFSVGDLAAMGLLVGRIYQPLTGLTNARIDVLTALVSFDRVFEVLDAPSPLADAPDAIELTDPKGRIEFRDVIFRYPLSNETIIPTLETPS-SSLSDEDARPVIEHLDLVIEPGTLVAIVGPSGAGKTTITNLVPRLYDVTDGAIFVDGHDVRSYTQSSLRQAIGVVVQDPHLFHESIADNLRYAKPDATEADMIAACKAAQIHEVIAKLPSAYDTVVGERGYRFSGGEKQRLSIARMLLKDPAVVILDEATSHLDSENESLVQTALAEALSDRTALVIAHRLSTITEADLIVVLDEGRVAQSGTHDELLAEGGLYSDLYQ 610 ++R A R+W FA PY+ + F++ +T QA+L LVP +LFGRIID I +++L+ I A+ V ++L+E + A+ ER+LSA++GEG+I+DLR+ALFDHVQRMP+AFFT TQTGTL +RLN+DVIGAQRALT TLG+++SN++ V+TL+ MFI EWRLT LAL+L PFF+ P +R+G I RE MD NA+MNSTMTERF+VSGA L KLFG H E F RA VRD+G+RSA++ RAFM+ LGL+G++GTAL+Y +GG INGDFS G L LV IYQPLT LT AR+D++TALVSF+RVFEVLD P + D+ +A ++ G ++F V F YP N + S S L DE V+ + L + PGT+ A+VGPSG+GKTT+ +L+PRLY+V+ G+I +D D+RS TQ SLR+ +GVV QDPHLFHES+A NLRY+ P A+ AC+AAQIH VIA LP YDTVVGERGYR SGGE Q L+IAR+LLK+P++VILDEATSHL +ENE LVQ AL +ALS RT+LVIAHRLST+ ADLI+V+D+G + + G H EL+ GGLYS+ +Q Sbjct: 1 MSRIGAKRIWLFAAPYKWTISLFISAITIQALLQLVPRILFGRIIDDGIIPGNQKLVTILALLTVAAALIEAIFAIVERWLSAQVGEGLIHDLRAALFDHVQRMPLAFFTNTQTGTLISRLNNDVIGAQRALTGTLGSILSNLVVAVSTLVTMFILEWRLTFLALMLLPFFIWPTKRVGKKLSDIAREQMDRNAEMNSTMTERFSVSGAQLVKLFGNHGQEATTFRHRAAAVRDLGVRSAIYGRAFMLSLGLVGAVGTALIYLVGGSYAINGDFSTGQLVTFAALVPLIYQPLTALTGARVDIMTALVSFERVFEVLDTPHGIKDSKEASDIDKVAGEVKFESVRFAYPTHNAASVSLGGNGSGSELGDE----VLHDISLTLAPGTVTALVGPSGSGKTTLASLLPRLYEVSSGSIKIDNRDLRSITQESLRKNVGVVTQDPHLFHESVAANLRYSDPSASPXQXEDACRAAQIHNVIAALPDGYDTVVGERGYRLSGGEXQXLAIARVLLKNPSIVILDEATSHLXAENEVLVQXALIKALSGRTSLVIAHRLSTVRNADLIIVIDDGSIVEKGQHTELVNAGGLYSEFHQ 589
BLAST of abc transporter permease atp-binding protein vs. nr
Match: gi|949035866|gb|KRO41073.1| (ABC transporter [Acidimicrobium sp. BACL19 MAG-120924-bin39]) HSP 1 Score: 676.011 bits (1743), Expect = 0.000e+0 Identity = 345/606 (56.93%), Postives = 445/606 (73.43%), Query Frame = 0 Query: 1 MAMHAIWPRDRDSVKGARITRESANRVWRFAEPYRSMVMGFLAIVTAQAVLGLVPPVLFGRIIDQAIPDEDRRLLVIFAIFIVGSSLLEGVLALGERFLSARIGEGVIYDLRSALFDHVQRMPIAFFTRTQTGTLTNRLNSDVIGAQRALTATLGTVVSNVITLVTTLIAMFIFEWRLTLLALILTPFFVMPYRRIGSIQQGITRESMDLNAQMNSTMTERFNVSGALLTKLFGRHDDEVRLFSSRAERVRDIGIRSALFTRAFMIMLGLLGSIGTALVYGLGGLMVINGDFSVGDLAAMGLLVGRIYQPLTGLTNARIDVLTALVSFDRVFEVLDAPSPLADAPDAIELTDPKGRIEFRDVIFRYPLSNETIIPTLETPSSSLSDEDARPVIEHLDLVIEPGTLVAIVGPSGAGKTTITNLVPRLYDVTDGAIFVDGHDVRSYTQSSLRQAIGVVVQDPHLFHESIADNLRYAKPDATEADMIAACKAAQIHEVIAKLPSAYDTVVGERGYRFSGGEKQRLSIARMLLKDPAVVILDEATSHLDSENESLVQTALAEALSDRTALVIAHRLSTITEADLIVVLDEGRVAQSGTHDELLAEGGLYS 606 M HA+ PR+ +V G + R + RV FA PY + + FLA + A AV+ LVPP +F IID AIP +R + A+ V ++L+E LA+ +R+ SA+IGEG+IYDLR ALF VQRMPIAFFTRTQTG+L +RLN+DVIGAQ A+T+TLGT VSN + LVTT+ AM EWRLT+L+L++ P F++P RR+G Q I + MDLNAQMN+ M ERFNV+GALL KLFGRH E FS RA VRD G+ +A++ R F + LGL+G++G VYG+G +V++GD + G L A+ LV R+Y PLT L+NAR+++LT+ VSFDRVFEVLDAP ++D A +L P+GRIEF V FRYP + +P+LE P + D D R V+ + L + PG VAIVGPSG+GKTT+ +L+PRLYD T G + +DGHDVR T SL AIGVV QDPHLFHESI NLRYA+P AT+AD++AAC A+IH+ IA LP Y TVVGERGYRFSGGEKQRL+IAR+LLK+P ++ILDEATSHLD+ENESLVQ+AL +A+ RTA+VIAHRLSTI AD I+V+++GR+ + G+H EL+A G Y+ Sbjct: 1 MHPHALIPRNAAAVSGQSLERATLRRVGEFARPYATTIAIFLAAIIASAVVALVPPFVFRAIIDTAIPAGNRSQVWWLALLAVTAALVEAALAIVQRWGSAQIGEGLIYDLRVALFTKVQRMPIAFFTRTQTGSLISRLNNDVIGAQSAVTSTLGTAVSNSVVLVTTVAAMLTLEWRLTVLSLVVLPAFIIPARRVGKRLQAIAAKQMDLNAQMNTQMQERFNVAGALLVKLFGRHKQETDAFSGRAAGVRDSGVLAAMYGRVFFVALGLVGALGAVAVYGIGAQLVVSGDITSGTLVALAALVARVYMPLTALSNARVELLTSFVSFDRVFEVLDAPVAISDRAGAYDLVAPQGRIEFDHVTFRYPPAASVSVPSLEAPGAPTGDPD-RDVLRDVSLAVAPGETVAIVGPSGSGKTTLASLIPRLYDATAGVVRIDGHDVRDLTADSLHAAIGVVSQDPHLFHESIESNLRYARPSATDADIVAACVGARIHDTIAALPDGYQTVVGERGYRFSGGEKQRLAIARLLLKNPVLMILDEATSHLDNENESLVQSALDDAMRGRTAVVIAHRLSTIVSADRILVVEDGRIVEQGSHAELMALEGAYA 605
BLAST of abc transporter permease atp-binding protein vs. nr
Match: gi|505252722|ref|WP_015439824.1| (ABC transporter ATP-binding protein [Ilumatobacter coccineus] >gi|464097694|dbj|BAN00576.1| putative ABC transporter permease/ATP-binding protein [Ilumatobacter coccineus YM16-304]) HSP 1 Score: 674.085 bits (1738), Expect = 0.000e+0 Identity = 350/602 (58.14%), Postives = 448/602 (74.42%), Query Frame = 0 Query: 6 IWPRDRDSVKGARITRESANRVWRFAEPYRSMVMGFLAIVTAQAVLGLVPPVLFGRIIDQAIPDEDRRLLVIFAIFIVGSSLLEGVLALGERFLSARIGEGVIYDLRSALFDHVQRMPIAFFTRTQTGTLTNRLNSDVIGAQRALTATLGTVVSNVITLVTTLIAMFIFEWRLTLLALILTPFFVMPYRRIGSIQQGITRESMDLNAQMNSTMTERFNVSGALLTKLFGRHDDEVRLFSSRAERVRDIGIRSALFTRAFMIMLGLLGSIGTALVYGLGGLMVINGDFSVGDLAAMGLLVGRIYQPLTGLTNARIDVLTALVSFDRVFEVLDAPSPLADAPDAIELTDPKGRIEFRDVIFRYPLSNETIIPTLETPSSSLSDEDAR-PVIEHLDLVIEPGTLVAIVGPSGAGKTTITNLVPRLYDVTDGAIFVDGHDVRSYTQSSLRQAIGVVVQDPHLFHESIADNLRYAKPDATEADMIAACKAAQIHEVIAKLPSAYDTVVGERGYRFSGGEKQRLSIARMLLKDPAVVILDEATSHLDSENESLVQTALAEALSDRTALVIAHRLSTITEADLIVVLDEGRVAQSGTHDELLAEGGLYS 606 + P D DSV+G + + RVW+FA PYR+ ++ FL + A+L LVPP + I+D AIP+EDR ++ A V ++L + LA+ +R+ SA++GEG+IYDLRSALF VQRMPIAFFTRT TG++T+RLN+DV+GAQ A+T+TLG+VVSNVI L TTL AMF EWRLTLL L++ P F++P RR+G QGI+RE M NA MN+ MTERFNVSGA L KLFG E F SRA VRD GIR+A++ R F + LGL+G+IGTA +YG+G LMV++GD S G L A+ LV R+YQPLTGLTNAR+D++T++VSF+RVFEVLDAP + + P AI+L DP G IEF DV+FRYP ++ + I ++E + D D V+ DL + G VA+VG SGAGK+T +LVPRLYDV+ GA+ +DGHDVR T +LR +IGVV QDPHLFHE+I DNLRYA PDA++ ++AA AA+IH+ IA LP YDTVVGERGYR SGGEKQRL+IAR+LLKDPA++ILDEATSHLD++NE+ +Q AL AL RTA+VIAHRLSTI AD I ++ GRVA+ GTHDEL+A G Y+ Sbjct: 1 MMPGDSDSVRGVELADGTLRRVWKFARPYRTTIIVFLLAILLAALLALVPPFVVREILDNAIPNEDRDRIIWLAAIAVVAALSDAGLAIVQRWCSAQVGEGLIYDLRSALFAKVQRMPIAFFTRTPTGSITSRLNTDVVGAQTAVTSTLGSVVSNVIVLGTTLTAMFALEWRLTLLTLVVLPLFIVPARRVGKRLQGISREQMGYNAAMNTQMTERFNVSGATLVKLFGSGTRERTSFDSRAAGVRDTGIRAAMYGRVFFVALGLVGAIGTAAIYGVGALMVVDGDISSGTLVALAALVTRVYQPLTGLTNARVDLMTSMVSFERVFEVLDAPEAIQEKPGAIDLVDPVGTIEFDDVVFRYPPASASAIASMEQNAGLGGDTDPDVDVLHGFDLSVAAGETVALVGASGAGKSTTISLVPRLYDVSSGAVRIDGHDVRDLTLDTLRTSIGVVSQDPHLFHETIGDNLRYADPDASDEQLVAAASAARIHDTIAALPDGYDTVVGERGYRLSGGEKQRLAIARLLLKDPAIMILDEATSHLDNDNEAHIQEALEHALEGRTAIVIAHRLSTIRSADRIAFIEGGRVAELGTHDELVAANGRYA 602
BLAST of abc transporter permease atp-binding protein vs. nr
Match: gi|750191483|ref|WP_040495557.1| (ABC transporter ATP-binding protein [Ilumatobacter nonamiensis]) HSP 1 Score: 667.152 bits (1720), Expect = 0.000e+0 Identity = 351/602 (58.31%), Postives = 447/602 (74.25%), Query Frame = 0 Query: 6 IWPRDRDSVKGARITRESANRVWRFAEPYRSMVMGFLAIVTAQAVLGLVPPVLFGRIIDQAIPDEDRRLLVIFAIFIVGSSLLEGVLALGERFLSARIGEGVIYDLRSALFDHVQRMPIAFFTRTQTGTLTNRLNSDVIGAQRALTATLGTVVSNVITLVTTLIAMFIFEWRLTLLALILTPFFVMPYRRIGSIQQGITRESMDLNAQMNSTMTERFNVSGALLTKLFGRHDDEVRLFSSRAERVRDIGIRSALFTRAFMIMLGLLGSIGTALVYGLGGLMVINGDFSVGDLAAMGLLVGRIYQPLTGLTNARIDVLTALVSFDRVFEVLDAPSPLADAPDAIELTDPKGRIEFRDVIFRYPLSNETIIPTLETPSSSLSDEDAR-PVIEHLDLVIEPGTLVAIVGPSGAGKTTITNLVPRLYDVTDGAIFVDGHDVRSYTQSSLRQAIGVVVQDPHLFHESIADNLRYAKPDATEADMIAACKAAQIHEVIAKLPSAYDTVVGERGYRFSGGEKQRLSIARMLLKDPAVVILDEATSHLDSENESLVQTALAEALSDRTALVIAHRLSTITEADLIVVLDEGRVAQSGTHDELLAEGGLYS 606 + P D D+VK + +A RVW FA PYR+ ++ FL + A A+L LVPP + IID AIP+ DR + + A V ++L + LA+ +R+ SAR+GEG+IYDLRSALF VQR+PIAFFTRT TG++T+RLNSDVIGAQ A+T+TLG++VSNV+ L+TTL AMF EWRLTLL LI+ P F++P RR+G Q I+RE M NA MN+ MTERFNVSGA+L KLFG E R F RA VRD GI SA++ R F + LGL+G+IGTA +YG+G +MV+NG S G L A+ LV R+YQPLTGLTNAR+D++T++VSF+RVFEVLDAP + + A++L P+G IEF DV+FRYP ++ET IP++E + +D D V+ L L + G VA+VG SGAGK+T +LVPRLYDVT GA+ +DG DVR T SLR+AIGVV QDPHLFHESIADNLRYA PDAT+ ++ A ++A+IH+ IA LP YDT+VGERGYR SGGEKQRL+IAR+LLK+PA+VILDEATSHLD++NE+ +Q AL AL RTALVIAHRLSTI AD I LD G + + GTH+EL+ GG Y+ Sbjct: 1 MMPGDADAVKDQHLASGTAKRVWSFARPYRTTIIIFLIAILAAALLALVPPFVVRAIIDTAIPESDRGAIYVLATLAVLAALADAGLAILQRWCSARVGEGLIYDLRSALFAKVQRLPIAFFTRTPTGSITSRLNSDVIGAQTAVTSTLGSIVSNVVVLITTLAAMFALEWRLTLLTLIVLPLFIVPARRVGKRLQAISREQMGYNAAMNTQMTERFNVSGAMLVKLFGSGRRERRAFERRAAGVRDTGISSAMYGRVFFVALGLVGAIGTAAIYGVGAIMVVNGGISTGTLVALAALVTRVYQPLTGLTNARVDLMTSMVSFERVFEVLDAPEAITERLGAVDLVQPRGTIEFDDVVFRYPPASETAIPSMEQNAGLTADTDPDIDVLHGLSLSVAEGETVALVGASGAGKSTTISLVPRLYDVTGGAVRIDGLDVRDLTLDSLRRAIGVVSQDPHLFHESIADNLRYADPDATDDRLVTAARSARIHDTIAALPDGYDTIVGERGYRLSGGEKQRLAIARLLLKNPAIVILDEATSHLDNDNEAHIQEALERALEGRTALVIAHRLSTIRAADRIAFLDAGSIVEIGTHEELVVAGGRYA 602
BLAST of abc transporter permease atp-binding protein vs. nr
Match: gi|1194609123|ref|WP_085944298.1| (ABC transporter ATP-binding protein [Actinoplanes globisporus]) HSP 1 Score: 664.07 bits (1712), Expect = 0.000e+0 Identity = 331/604 (54.80%), Postives = 444/604 (73.51%), Query Frame = 0 Query: 9 RDRDSVKGARITRESANRVWRFAEPYRSMVMGFLAIVTAQAVLGLVPPVLFGRIIDQAIPDED--RRLLVIFAIFIVGSSLLEGVLALGERFLSARIGEGVIYDLRSALFDHVQRMPIAFFTRTQTGTLTNRLNSDVIGAQRALTATLGTVVSNVITLVTTLIAMFIFEWRLTLLALILTPFFVMPYRRIGSIQQGITRESMDLNAQMNSTMTERFNVSGALLTKLFGRHDDEVRLFSSRAERVRDIGIRSALFTRAFMIMLGLLGSIGTALVYGLGGLMVINGDFSVGDLAAMGLLVGRIYQPLTGLTNARIDVLTALVSFDRVFEVLDAPSPLADAPDAIELTDPKGRIEFRDVIFRYPLSNETIIPTLETPSSSLSDEDARPVIEHLDLVIEPGTLVAIVGPSGAGKTTITNLVPRLYDVTDGAIFVDGHDVRSYTQSSLRQAIGVVVQDPHLFHESIADNLRYAKPDATEADMIAACKAAQIHEVIAKLPSAYDTVVGERGYRFSGGEKQRLSIARMLLKDPAVVILDEATSHLDSENESLVQTALAEALSDRTALVIAHRLSTITEADLIVVLDEGRVAQSGTHDELLAEGGLYSDLYQ 610 ++ DSV R+TR + R+ FA PYR ++ FL V A +G+ P+L G +++ L++ A+ I ++++ L+L +R+ SARIGEG+I DLR+ ++DHVQRMP+ FFTRTQTG L +RLN+DV+GAQRA T+TL VVSNVI LV T MF W++T L+L+L P F++P RR+G ITRES +L+A+MN+TMTERFNVSGALL KLFGR D E + FSSRAERVRDIG++ A+F+R F + + L+ S+ AL YGLGG + + G + G + + LL+ R+Y PLT L+N R+DV++ALVSFDRVFEVLD + + PDA+++ GR+EFRDV FRYP ++E + TLE ++L + PV++ +D V+EPG +VA+VGPSGAGK+T + LV R+YDVT GA+ V G DVR T SLR IGVV QD HLFHE+IA+NLRYAKPDATE +M AA + AQ+ +++ LP DTVVGERGYRFSGGEKQR++IAR+LLK P++VILDEAT+HLDSE+E+ VQ AL+ AL+ RTALVIAHRLST+ +AD I+VLDEGR+ + G H+EL+A GGLY++LY+ Sbjct: 11 QNSDSVTKHRLTRGTTRRILHFARPYRRDIVVFLITVVLDACIGVATPLLAGHVVNAITGGGSGAAALVIRLALAIAILAVVDAFLSLAQRWYSARIGEGIILDLRTRVYDHVQRMPLQFFTRTQTGALVSRLNNDVMGAQRAFTSTLSGVVSNVIQLVLTAAVMFSLSWQITALSLVLLPIFIIPARRVGRRLAEITRESYNLDAKMNATMTERFNVSGALLVKLFGRPDSEAQHFSSRAERVRDIGVQQAMFSRTFFVAMLLVASLAQALTYGLGGWLAVTGSVTAGTVVTLALLLTRLYGPLTALSNVRVDVMSALVSFDRVFEVLDLKPGIEEKPDAVDVPAGAGRVEFRDVEFRYPAASEVSLATLED-VATLDRTETAPVLKGVDFVVEPGQMVALVGPSGAGKSTTSMLVSRVYDVTGGAVLVGGVDVRDATLGSLRDTIGVVTQDSHLFHETIAENLRYAKPDATEEEMWAALEGAQVGDLVRGLPDKLDTVVGERGYRFSGGEKQRIAIARLLLKHPSIVILDEATAHLDSESEAAVQRALSAALAGRTALVIAHRLSTVRDADQILVLDEGRIVERGRHEELVAAGGLYAELYR 613 The following BLAST results are available for this feature:
BLAST of abc transporter permease atp-binding protein vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 20
Pagesback to top
BLAST of abc transporter permease atp-binding protein vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
Pagesback to top
BLAST of abc transporter permease atp-binding protein vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold8083_size2872:15..2546- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold8083_size2872-snap-gene-0.2 ID=maker-scaffold8083_size2872-snap-gene-0.2|Name=abc transporter permease atp-binding protein|organism=Tigriopus kingsejongensis|type=gene|length=2532bp|location=Sequence derived from alignment at scaffold8083_size2872:15..2546- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'abc transporter permease atp-binding protein' has the following synonyms
Add to Basket
|